CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Gene3D G3DSA:3.30.1490.20 6 197 6.4E-54 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Gene3D G3DSA:3.50.30.10 359 470 5.1E-35 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 786 2.2E-58 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 SUPERFAMILY SSF52009 350 468 1.44E-34 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 1.1E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 350 1.0E-120 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 SUPERFAMILY SSF56059 7 386 1.53E-108 T 29-03-2018 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 SUPERFAMILY SSF51621 471 791 9.68E-94 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Gene3D G3DSA:3.20.20.60 480 792 2.0E-101 T 29-03-2018 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 Gene3D G3DSA:3.30.470.20 198 358 1.2E-44 T 29-03-2018 CKQ55_RS24855 4f74821b7c992b22a77430be2b48b5a7 792 PIRSF PIRSF000854 4 792 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 3.7E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 Gene3D G3DSA:3.40.50.2300 185 319 1.1E-29 T 29-03-2018 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 Gene3D G3DSA:1.10.260.40 13 64 1.7E-20 T 29-03-2018 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 SMART SM00354 12 82 6.4E-29 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 SUPERFAMILY SSF47413 12 70 5.91E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 Pfam PF13377 Periplasmic binding protein-like domain 180 339 2.7E-29 T 29-03-2018 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 29-03-2018 CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 SUPERFAMILY SSF53822 71 339 6.0E-53 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS21035 565569eec4737b0f5e3aea462bb43796 339 Gene3D G3DSA:3.40.50.2300 65 184 6.3E-28 T 29-03-2018 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 Gene3D G3DSA:2.40.160.10 10 372 2.5E-54 T 29-03-2018 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 SUPERFAMILY SSF56935 22 372 6.8E-85 T 29-03-2018 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 324 340 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 Pfam PF00267 Gram-negative porin 27 372 1.0E-153 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 4.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 4.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 280 299 4.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 4.0E-73 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 8.2E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 324 341 8.2E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 8.2E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 8.2E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS21415 84e4abb496aa0142e041def619a2bf74 372 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 8.2E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 SUPERFAMILY SSF52540 48 226 2.34E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 Gene3D G3DSA:1.10.10.10 864 917 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 870 886 5.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 856 870 5.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 886 898 5.0E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 SMART SM00421 853 910 1.9E-25 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 Gene3D G3DSA:3.40.50.300 49 186 1.3E-5 T 29-03-2018 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 SUPERFAMILY SSF46894 850 916 7.48E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 Pfam PF00196 Bacterial regulatory proteins, luxR family 855 908 2.4E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 ProSitePatterns PS00622 LuxR-type HTH domain signature. 870 897 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 Gene3D G3DSA:1.25.40.10 725 863 4.5E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS27280 aa32fde856b3083f127e266ba2c2d0c9 917 Gene3D G3DSA:1.25.40.10 358 724 6.2E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS16955 37600d7189db3088fabd20367f58648e 393 Gene3D G3DSA:3.90.1150.10 272 393 1.1E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS16955 37600d7189db3088fabd20367f58648e 393 Pfam PF00155 Aminotransferase class I and II 56 389 5.0E-35 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS16955 37600d7189db3088fabd20367f58648e 393 Gene3D G3DSA:3.40.640.10 56 271 1.0E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS16955 37600d7189db3088fabd20367f58648e 393 SUPERFAMILY SSF53383 5 392 4.68E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 SMART SM00842 10 196 1.9E-96 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 Gene3D G3DSA:3.30.420.40 2 186 7.6E-35 T 29-03-2018 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 SUPERFAMILY SSF53067 8 221 5.18E-61 T 29-03-2018 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 PIRSF PIRSF003101 2 418 1.6E-152 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.522 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 7.8E-30 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.3E-161 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 SUPERFAMILY SSF53067 198 384 1.84E-47 T 29-03-2018 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 Pfam PF14450 Cell division protein FtsA 207 381 8.8E-25 T 29-03-2018 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 Gene3D G3DSA:3.30.420.40 197 247 1.8E-6 T 29-03-2018 CKQ55_RS08115 7f187966ca411498903d28dfc9f16d3f 418 Gene3D G3DSA:3.90.640.10 248 300 2.6E-19 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.8E-16 T 29-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Gene3D G3DSA:4.10.1200.10 1 26 6.6E-15 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Gene3D G3DSA:2.40.40.20 1048 1238 8.1E-48 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 6.0E-22 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Gene3D G3DSA:3.40.228.10 225 660 2.7E-104 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Gene3D G3DSA:2.20.25.90 55 98 9.1E-29 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 2.0E-190 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Gene3D G3DSA:3.40.50.740 108 214 1.6E-4 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 29-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 SUPERFAMILY SSF53706 4 1070 0.0 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 SMART SM00926 43 105 9.8E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 Gene3D G3DSA:3.30.2070.10 795 835 3.2E-5 T 29-03-2018 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS24525 ce33f1db2a177da5086c869dcb24dd3f 1247 SUPERFAMILY SSF50692 1082 1235 3.84E-48 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 SUPERFAMILY SSF53850 27 538 1.25E-105 T 29-03-2018 CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 435 9.1E-70 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 Gene3D G3DSA:3.10.105.10 298 508 8.5E-40 T 29-03-2018 CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 TIGRFAM TIGR04028 SBP_KPN_01854: ABC transporter substrate binding protein, KPN_01854 family 32 538 3.3E-264 T 29-03-2018 IPR023920 ABC transporter, substrate-binding protein, KPN01854 CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 Gene3D G3DSA:3.90.76.10 53 152 1.6E-25 T 29-03-2018 CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 PIRSF PIRSF002741 4 540 3.1E-71 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS27665 c89668df5ce35b26693efa9237e518fc 540 Gene3D G3DSA:3.40.190.10 153 297 1.6E-24 T 29-03-2018 CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 SUPERFAMILY SSF50331 252 375 1.26E-18 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 2.4E-149 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 Pfam PF08402 TOBE domain 295 375 1.4E-19 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 SMART SM00382 44 227 2.9E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 SUPERFAMILY SSF52540 19 257 4.13E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 Pfam PF00005 ABC transporter 36 177 6.9E-38 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 Gene3D G3DSA:2.40.50.140 298 368 1.1E-6 T 29-03-2018 CKQ55_RS02405 843100073f2f2faa33767251587a0ce6 377 Gene3D G3DSA:3.40.50.300 16 293 2.3E-77 T 29-03-2018 CKQ55_RS06540 6d12d89428322e4d4efe62989f0f7e4e 221 Gene3D G3DSA:3.20.20.60 21 220 5.0E-5 T 29-03-2018 CKQ55_RS06540 6d12d89428322e4d4efe62989f0f7e4e 221 Pfam PF07302 AroM protein 1 220 4.0E-68 T 29-03-2018 IPR010843 Uncharacterised protein family AroM CKQ55_RS06540 6d12d89428322e4d4efe62989f0f7e4e 221 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 1 219 9.0E-85 T 29-03-2018 IPR010843 Uncharacterised protein family AroM CKQ55_RS09520 623ab55eedd150a8f0af1a15a24152fe 234 Gene3D G3DSA:3.40.570.10 5 234 1.8E-44 T 29-03-2018 CKQ55_RS09520 623ab55eedd150a8f0af1a15a24152fe 234 SUPERFAMILY SSF54060 7 222 2.3E-48 T 29-03-2018 CKQ55_RS09520 623ab55eedd150a8f0af1a15a24152fe 234 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 75 83 - T 29-03-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 CKQ55_RS09520 623ab55eedd150a8f0af1a15a24152fe 234 Pfam PF01223 DNA/RNA non-specific endonuclease 1 214 6.7E-45 T 29-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CKQ55_RS09520 623ab55eedd150a8f0af1a15a24152fe 234 SMART SM00477 14 215 3.5E-44 T 29-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CKQ55_RS09520 623ab55eedd150a8f0af1a15a24152fe 234 SMART SM00892 13 215 1.8E-44 T 29-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CKQ55_RS11140 7a1d9084f3bd30e52ac0acb0a384b395 171 Gene3D G3DSA:1.10.10.10 1 92 5.3E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11140 7a1d9084f3bd30e52ac0acb0a384b395 171 SUPERFAMILY SSF46785 13 144 3.69E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11140 7a1d9084f3bd30e52ac0acb0a384b395 171 Pfam PF01475 Ferric uptake regulator family 20 138 7.0E-15 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 SUPERFAMILY SSF46946 2 114 6.9E-46 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 Gene3D G3DSA:1.10.8.50 1 66 5.7E-22 T 29-03-2018 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 PIRSF PIRSF002134 1 118 9.9E-42 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.2E-53 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 Gene3D G3DSA:4.10.910.10 85 118 9.7E-26 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.5E-33 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.847 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15425 780d4d705d8d83023b21d6dc2e04a25b 118 Gene3D G3DSA:4.10.910.10 67 84 1.7E-17 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 SMART SM00347 46 148 3.6E-32 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.2E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.2E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.2E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.2E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 SUPERFAMILY SSF46785 22 166 5.81E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19340 b804a22b81ce89139208b397803adf9c 176 Gene3D G3DSA:1.10.10.10 25 169 1.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12430 b1aeac575fd813794a35db714cb2dc13 473 Gene3D G3DSA:1.20.1250.20 12 222 1.5E-15 T 29-03-2018 CKQ55_RS12430 b1aeac575fd813794a35db714cb2dc13 473 Gene3D G3DSA:1.20.1250.20 223 464 1.2E-13 T 29-03-2018 CKQ55_RS12430 b1aeac575fd813794a35db714cb2dc13 473 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 20 455 9.2E-124 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS12430 b1aeac575fd813794a35db714cb2dc13 473 SUPERFAMILY SSF103473 20 437 8.24E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS12430 b1aeac575fd813794a35db714cb2dc13 473 Pfam PF13347 MFS/sugar transport protein 22 441 4.7E-99 T 29-03-2018 CKQ55_RS04205 0b5e1493c269208504cb38d4e1496ace 457 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 3.6E-132 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CKQ55_RS04205 0b5e1493c269208504cb38d4e1496ace 457 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.1E-188 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 Gene3D G3DSA:3.40.50.300 2 252 1.4E-61 T 29-03-2018 CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 SMART SM00382 30 223 4.9E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 Pfam PF00005 ABC transporter 22 173 4.9E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 4 250 8.1E-123 T 29-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 PIRSF PIRSF037116 1 252 8.4E-140 T 29-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK CKQ55_RS10855 a905bbcebd71d71dbf9c22451e6bbeeb 252 SUPERFAMILY SSF52540 3 248 2.01E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 Gene3D G3DSA:3.40.50.2300 3 131 2.0E-33 T 29-03-2018 CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 SUPERFAMILY SSF46894 142 234 7.94E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 SMART SM00448 11 121 1.3E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 Pfam PF00072 Response regulator receiver domain 13 121 4.7E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 Gene3D G3DSA:1.10.10.10 132 239 1.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 SMART SM00862 156 232 1.8E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 SUPERFAMILY SSF52172 6 137 1.85E-38 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS22420 947186728fd67b2d625fb7c522ad7c9c 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 1.5E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS10215 76671c051b91db47317cb7fb33bac86c 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 24.114 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CKQ55_RS10215 76671c051b91db47317cb7fb33bac86c 183 PIRSF PIRSF016183 10 183 6.7E-72 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CKQ55_RS10215 76671c051b91db47317cb7fb33bac86c 183 Gene3D G3DSA:1.10.60.30 111 183 3.9E-28 T 29-03-2018 CKQ55_RS10215 76671c051b91db47317cb7fb33bac86c 183 SUPERFAMILY SSF158710 37 180 3.79E-52 T 29-03-2018 IPR023153 PSPTO4464-like domain CKQ55_RS10215 76671c051b91db47317cb7fb33bac86c 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 4.0E-56 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CKQ55_RS10215 76671c051b91db47317cb7fb33bac86c 183 Gene3D G3DSA:1.10.60.30 38 106 2.9E-24 T 29-03-2018 CKQ55_RS24445 1727b8b2dfa99de6c2ce53b0ff582540 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 5.8E-119 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS24445 1727b8b2dfa99de6c2ce53b0ff582540 284 Pfam PF00793 DAHP synthetase I family 10 275 3.7E-69 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS24445 1727b8b2dfa99de6c2ce53b0ff582540 284 SUPERFAMILY SSF51569 3 277 1.74E-104 T 29-03-2018 CKQ55_RS24445 1727b8b2dfa99de6c2ce53b0ff582540 284 Gene3D G3DSA:3.20.20.70 17 280 2.5E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS24445 1727b8b2dfa99de6c2ce53b0ff582540 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 50.025 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS18990 fcf8292dc8057666ed7a58d9548f16ab 282 SUPERFAMILY SSF81345 3 260 2.75E-38 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS18990 fcf8292dc8057666ed7a58d9548f16ab 282 Gene3D G3DSA:1.10.3470.10 4 272 9.8E-28 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS18990 fcf8292dc8057666ed7a58d9548f16ab 282 Pfam PF00950 ABC 3 transport family 10 264 6.1E-83 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CKQ55_RS30530 9bb5b7d9a0068529a247c60b554d59f7 186 Gene3D G3DSA:3.40.30.10 49 185 3.0E-8 T 29-03-2018 CKQ55_RS30530 9bb5b7d9a0068529a247c60b554d59f7 186 SUPERFAMILY SSF52833 63 171 1.7E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS30530 9bb5b7d9a0068529a247c60b554d59f7 186 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 14 174 1.3E-56 T 29-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB CKQ55_RS30530 9bb5b7d9a0068529a247c60b554d59f7 186 Pfam PF13728 F plasmid transfer operon protein 75 162 5.3E-11 T 29-03-2018 CKQ55_RS30070 504e2af94fb904c00bff91a758c5bc0f 137 Gene3D G3DSA:1.10.287.620 2 79 6.8E-4 T 29-03-2018 CKQ55_RS00130 504e2af94fb904c00bff91a758c5bc0f 137 Gene3D G3DSA:1.10.287.620 2 79 6.8E-4 T 29-03-2018 CKQ55_RS26375 3912648cea471859c5f5f56413352e75 367 Gene3D G3DSA:3.20.20.210 2 367 1.8E-102 T 29-03-2018 CKQ55_RS26375 3912648cea471859c5f5f56413352e75 367 SUPERFAMILY SSF51726 10 367 4.32E-82 T 29-03-2018 CKQ55_RS26375 3912648cea471859c5f5f56413352e75 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 343 5.2E-13 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS12675 9ba7665e91ce9b8dec77824ebc4d2cf6 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 1.2E-22 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CKQ55_RS12675 9ba7665e91ce9b8dec77824ebc4d2cf6 211 Gene3D G3DSA:1.20.950.20 1 211 1.9E-54 T 29-03-2018 CKQ55_RS12675 9ba7665e91ce9b8dec77824ebc4d2cf6 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 8.0E-67 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CKQ55_RS12675 9ba7665e91ce9b8dec77824ebc4d2cf6 211 SUPERFAMILY SSF81342 4 207 1.44E-55 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CKQ55_RS31545 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 29-03-2018 IPR032874 DDE domain CKQ55_RS31545 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31545 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31545 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02605 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 29-03-2018 IPR032874 DDE domain CKQ55_RS02605 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02605 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02605 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02515 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 29-03-2018 IPR032874 DDE domain CKQ55_RS02515 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02515 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02515 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02490 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 29-03-2018 IPR032874 DDE domain CKQ55_RS02490 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02490 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02490 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 Pfam PF00108 Thiolase, N-terminal domain 7 263 7.5E-79 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 SUPERFAMILY SSF53901 6 271 2.42E-76 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 Gene3D G3DSA:3.40.47.10 266 391 9.2E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 SUPERFAMILY SSF53901 272 393 1.26E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 392 2.1E-133 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 Gene3D G3DSA:3.40.47.10 1 265 1.8E-57 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 PIRSF PIRSF000429 1 395 1.3E-120 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CKQ55_RS17685 4f1e11535962acc44c668647f40d9f61 396 Pfam PF02803 Thiolase, C-terminal domain 272 393 2.1E-41 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CKQ55_RS14380 52edd6a877dd80f057b2a0a72ade80d9 280 SUPERFAMILY SSF53335 9 279 2.32E-100 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS14380 52edd6a877dd80f057b2a0a72ade80d9 280 Gene3D G3DSA:3.40.50.150 1 280 2.2E-92 T 29-03-2018 CKQ55_RS14380 52edd6a877dd80f057b2a0a72ade80d9 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 1.0E-116 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CKQ55_RS14380 52edd6a877dd80f057b2a0a72ade80d9 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS14380 52edd6a877dd80f057b2a0a72ade80d9 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.998 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CKQ55_RS15590 654af3f284ac16a8fbe3eda8c78d2c7d 246 SMART SM01057 25 245 2.1E-106 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CKQ55_RS15590 654af3f284ac16a8fbe3eda8c78d2c7d 246 Gene3D G3DSA:3.10.200.10 21 246 1.2E-73 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CKQ55_RS15590 654af3f284ac16a8fbe3eda8c78d2c7d 246 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 245 2.5E-53 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CKQ55_RS15590 654af3f284ac16a8fbe3eda8c78d2c7d 246 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 116 132 - T 29-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 CKQ55_RS15590 654af3f284ac16a8fbe3eda8c78d2c7d 246 SUPERFAMILY SSF51069 24 245 1.24E-81 T 29-03-2018 IPR001148 Alpha carbonic anhydrase CKQ55_RS26090 33512731b3f8fd8e257698eab768dd12 551 Gene3D G3DSA:3.40.1080.10 232 523 4.2E-43 T 29-03-2018 CKQ55_RS26090 33512731b3f8fd8e257698eab768dd12 551 Gene3D G3DSA:3.40.1080.10 2 218 3.3E-35 T 29-03-2018 CKQ55_RS26090 33512731b3f8fd8e257698eab768dd12 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 551 0.0 T 29-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CKQ55_RS26090 33512731b3f8fd8e257698eab768dd12 551 SUPERFAMILY SSF100950 232 488 7.44E-23 T 29-03-2018 CKQ55_RS26090 33512731b3f8fd8e257698eab768dd12 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 11 551 8.3E-297 T 29-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CKQ55_RS26090 33512731b3f8fd8e257698eab768dd12 551 SUPERFAMILY SSF100950 40 280 1.95E-37 T 29-03-2018 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 1.3E-31 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.71 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 SUPERFAMILY SSF53738 258 365 2.83E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 8.7E-45 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 SUPERFAMILY SSF53738 156 256 8.63E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 4.2E-20 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Gene3D G3DSA:3.40.120.10 3 154 4.5E-48 T 29-03-2018 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Gene3D G3DSA:3.40.120.10 155 267 3.6E-33 T 29-03-2018 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Gene3D G3DSA:3.40.120.10 268 373 1.5E-28 T 29-03-2018 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 3.0E-15 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 SUPERFAMILY SSF55957 357 444 6.93E-22 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 Gene3D G3DSA:3.30.310.50 374 445 1.6E-17 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 SUPERFAMILY SSF53738 2 181 6.67E-48 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 4.9E-198 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.2E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.2E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS16050 8959180a68cce506639767253d4e03a2 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.2E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS18360 e38df3079e6d743d84dcce79531efc1f 245 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 31 241 4.9E-114 T 29-03-2018 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CKQ55_RS18360 e38df3079e6d743d84dcce79531efc1f 245 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 32 237 8.3E-54 T 29-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CKQ55_RS18360 e38df3079e6d743d84dcce79531efc1f 245 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 31 244 27.666 T 29-03-2018 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 215 4.6E-46 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 Gene3D G3DSA:3.40.1010.10 8 128 5.5E-29 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 Gene3D G3DSA:3.30.950.10 129 250 5.5E-30 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 255 1.2E-99 T 29-03-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 SUPERFAMILY SSF53790 7 255 7.07E-69 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18330 36c21980789ceb1c085cccd261f8b7ee 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 588 39.818 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 Gene3D G3DSA:3.40.30.10 465 589 1.5E-19 T 29-03-2018 CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 Pfam PF11412 Disulphide bond corrector protein DsbC 29 137 5.1E-35 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 Gene3D G3DSA:2.60.40.1250 20 144 4.2E-37 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 SUPERFAMILY SSF74863 27 140 5.62E-41 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 Pfam PF13899 Thioredoxin-like 486 560 1.3E-13 T 29-03-2018 CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 SUPERFAMILY SSF52833 469 585 3.56E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 196 401 1.2E-19 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CKQ55_RS10750 705cf6b39d116f489421253a7f4ea7d8 589 ProSitePatterns PS00194 Thioredoxin family active site. 496 514 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS22185 120ded08a809e17ce2c63fbe8dd7109a 287 SMART SM00382 41 240 6.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS22185 120ded08a809e17ce2c63fbe8dd7109a 287 Pfam PF00005 ABC transporter 36 191 4.0E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS22185 120ded08a809e17ce2c63fbe8dd7109a 287 SUPERFAMILY SSF52540 13 250 2.43E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22185 120ded08a809e17ce2c63fbe8dd7109a 287 Gene3D G3DSA:3.40.50.300 10 283 4.1E-53 T 29-03-2018 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 SUPERFAMILY SSF48179 206 299 1.0E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 SUPERFAMILY SSF51735 5 198 3.74E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.5E-19 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 SMART SM00984 324 420 4.1E-23 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 PIRSF PIRSF500136 1 420 7.3E-146 T 29-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 80.703 T 29-03-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 PIRSF PIRSF000124 4 419 1.3E-75 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Gene3D G3DSA:3.40.50.720 230 420 2.4E-51 T 29-03-2018 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 1.9E-57 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 SUPERFAMILY SSF52413 311 419 6.28E-26 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 1.3E-118 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Gene3D G3DSA:1.20.5.170 206 229 1.0E-14 T 29-03-2018 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 5.2E-27 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS11975 b7eba2858138bf32cbe875dba54ad17a 420 Gene3D G3DSA:3.40.50.720 3 205 4.9E-43 T 29-03-2018 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 4 199 37.904 T 29-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 SUPERFAMILY SSF101386 111 198 1.11E-23 T 29-03-2018 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 112 197 1.7E-16 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 101 1.7E-31 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 108 194 18.324 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 SUPERFAMILY SSF141734 5 117 5.89E-47 T 29-03-2018 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 101 3.0E-24 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 Gene3D G3DSA:1.10.287.1080 108 199 6.6E-20 T 29-03-2018 CKQ55_RS22730 1314e6780814685f7c7c1f3ff8645851 199 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 111 194 2.0E-30 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 Pfam PF13378 Enolase C-terminal domain-like 127 280 2.5E-16 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 Gene3D G3DSA:3.20.20.120 111 295 7.2E-40 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 Gene3D G3DSA:3.30.390.10 1 110 2.3E-19 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 SUPERFAMILY SSF51604 107 316 4.06E-53 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 2.0E-121 T 29-03-2018 CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 SMART SM00922 115 210 2.3E-12 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 SUPERFAMILY SSF54826 1 99 3.61E-27 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS21245 7fac1f06f69f910f41b31baab8b92836 321 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 318 24.009 T 29-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 SUPERFAMILY SSF54211 258 272 6.83E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 SUPERFAMILY SSF54211 306 457 6.83E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.239 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 Pfam PF13481 AAA domain 88 225 1.8E-15 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 Gene3D G3DSA:3.40.50.300 76 286 9.6E-41 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.5E-9 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 Gene3D G3DSA:3.30.230.10 288 457 8.3E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 9.2E-237 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 SMART SM00382 94 248 1.7E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 29-03-2018 CKQ55_RS08750 1fe0fd1b6d4e29ad9768dd66fb2c1dc5 460 SUPERFAMILY SSF52540 72 291 4.43E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PIRSF PIRSF001480 1 392 5.6E-109 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 Gene3D G3DSA:2.60.120.10 296 391 9.2E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 382 7.1E-128 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 Gene3D G3DSA:2.60.120.10 1 295 1.8E-78 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 SUPERFAMILY SSF51182 1 374 1.4E-102 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 1.5E-73 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS25820 01954bb3631556b030f26cb7941c4603 392 Pfam PF01238 Phosphomannose isomerase type I 1 356 7.2E-111 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CKQ55_RS31420 33b5936e5ff50835cfb023159ae08954 109 SUPERFAMILY SSF54913 4 104 3.04E-36 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CKQ55_RS31420 33b5936e5ff50835cfb023159ae08954 109 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.2E-35 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CKQ55_RS31420 33b5936e5ff50835cfb023159ae08954 109 Gene3D G3DSA:3.30.70.120 1 106 4.7E-38 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 Gene3D G3DSA:2.40.50.100 160 278 2.4E-5 T 29-03-2018 CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 Pfam PF13533 Biotin-lipoyl like 41 90 9.8E-17 T 29-03-2018 CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 SUPERFAMILY SSF111369 40 216 7.59E-22 T 29-03-2018 CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 Gene3D G3DSA:2.40.50.100 42 98 9.0E-17 T 29-03-2018 CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 Pfam PF13437 HlyD family secretion protein 166 244 4.1E-11 T 29-03-2018 CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 241 2.6E-35 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS25655 daa35d671f9a8961bfc80abb4226769d 298 Gene3D G3DSA:1.10.287.470 99 159 8.9E-6 T 29-03-2018 CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 Gene3D G3DSA:2.10.70.20 148 198 1.5E-12 T 29-03-2018 CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 Pfam PF11612 Type II secretion system (T2SS), protein J 59 191 1.8E-38 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 5.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 3.4E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 7 193 4.0E-63 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 SUPERFAMILY SSF54523 40 195 3.88E-47 T 29-03-2018 CKQ55_RS04810 6c64d4a79d673f4eff7fc99df01dae59 199 Gene3D G3DSA:3.10.610.10 39 145 8.4E-30 T 29-03-2018 CKQ55_RS24235 c4f437c32286dc770b18cc8d8e33c9cd 228 Pfam PF00849 RNA pseudouridylate synthase 25 177 1.6E-25 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS24235 c4f437c32286dc770b18cc8d8e33c9cd 228 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS24235 c4f437c32286dc770b18cc8d8e33c9cd 228 SUPERFAMILY SSF55120 11 224 1.76E-57 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS24235 c4f437c32286dc770b18cc8d8e33c9cd 228 Gene3D G3DSA:3.30.2350.10 16 226 9.9E-56 T 29-03-2018 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 38.025 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 1.8E-79 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 159 1.1E-6 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 SUPERFAMILY SSF55681 4 204 1.16E-68 T 29-03-2018 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 PIRSF PIRSF016262 1 210 1.2E-58 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-23 T 29-03-2018 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 Gene3D G3DSA:3.30.930.10 1 204 6.3E-60 T 29-03-2018 CKQ55_RS04165 2430ba100e5804e6ac3d7182ab3656d4 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CKQ55_RS06050 50d32fc682df38259d41e77dfc80e83b 528 Pfam PF12792 CSS motif domain associated with EAL 39 242 5.7E-37 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CKQ55_RS06050 50d32fc682df38259d41e77dfc80e83b 528 SUPERFAMILY SSF141868 274 515 5.89E-76 T 29-03-2018 IPR001633 EAL domain CKQ55_RS06050 50d32fc682df38259d41e77dfc80e83b 528 Pfam PF00563 EAL domain 276 501 1.4E-64 T 29-03-2018 IPR001633 EAL domain CKQ55_RS06050 50d32fc682df38259d41e77dfc80e83b 528 SMART SM00052 266 507 7.8E-103 T 29-03-2018 IPR001633 EAL domain CKQ55_RS06050 50d32fc682df38259d41e77dfc80e83b 528 Gene3D G3DSA:3.20.20.450 271 521 1.1E-81 T 29-03-2018 IPR001633 EAL domain CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 9.7E-151 T 29-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 PIRSF PIRSF001359 1 284 1.1E-113 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 Hamap MF_01294 D-tagatose-1,6-bisphosphate aldolase subunit GatY [gatY]. 1 284 69.188 T 29-03-2018 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY GO:0009025|GO:0019404|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 SUPERFAMILY SSF51569 1 283 3.08E-99 T 29-03-2018 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 2.1E-99 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 Gene3D G3DSA:3.20.20.70 1 284 2.8E-105 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 84 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS16260 db14acb036b9d6989fb477219a310054 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 3.3E-104 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 Gene3D G3DSA:3.30.420.40 4 195 3.0E-73 T 29-03-2018 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PRINTS PR00471 Acetate kinase family signature 203 224 3.1E-42 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PRINTS PR00471 Acetate kinase family signature 173 186 3.1E-42 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PRINTS PR00471 Acetate kinase family signature 322 338 3.1E-42 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PRINTS PR00471 Acetate kinase family signature 5 16 3.1E-42 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PRINTS PR00471 Acetate kinase family signature 374 386 3.1E-42 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PRINTS PR00471 Acetate kinase family signature 300 313 3.1E-42 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 SUPERFAMILY SSF53067 4 195 2.59E-65 T 29-03-2018 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 SUPERFAMILY SSF53067 157 392 4.88E-87 T 29-03-2018 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 Gene3D G3DSA:3.30.420.40 197 402 5.1E-78 T 29-03-2018 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 PIRSF PIRSF000722 1 396 8.6E-147 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 Pfam PF00871 Acetokinase family 4 387 6.2E-147 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 TIGRFAM TIGR00016 ackA: acetate kinase 2 393 4.7E-153 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 Hamap MF_01882 Probable propionate kinase [pduW]. 1 392 73.061 T 29-03-2018 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 Hamap MF_00020 Acetate kinase [ackA]. 1 398 177.696 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18175 5b713661549bc5f340613cb8e36bd4ce 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS18930 8fb8932bf7e22cb544f0c0dd2fb88ec9 349 SUPERFAMILY SSF51735 152 311 7.62E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18930 8fb8932bf7e22cb544f0c0dd2fb88ec9 349 Pfam PF00107 Zinc-binding dehydrogenase 184 309 3.9E-21 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS18930 8fb8932bf7e22cb544f0c0dd2fb88ec9 349 Gene3D G3DSA:3.90.180.10 3 174 3.1E-39 T 29-03-2018 CKQ55_RS18930 8fb8932bf7e22cb544f0c0dd2fb88ec9 349 Gene3D G3DSA:3.40.50.720 175 294 1.0E-27 T 29-03-2018 CKQ55_RS18930 8fb8932bf7e22cb544f0c0dd2fb88ec9 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 142 1.3E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS18930 8fb8932bf7e22cb544f0c0dd2fb88ec9 349 SUPERFAMILY SSF50129 8 183 2.04E-44 T 29-03-2018 IPR011032 GroES-like CKQ55_RS31100 3270a8354d88166ab0dca53f1800ea55 179 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 9 173 4.8E-36 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CKQ55_RS31100 3270a8354d88166ab0dca53f1800ea55 179 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 25 173 2.1E-29 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CKQ55_RS06870 c17d656a7ad13067792f8c5ee47dd4d0 247 Gene3D G3DSA:3.40.50.300 3 221 2.5E-64 T 29-03-2018 CKQ55_RS06870 c17d656a7ad13067792f8c5ee47dd4d0 247 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06870 c17d656a7ad13067792f8c5ee47dd4d0 247 SUPERFAMILY SSF52540 6 236 1.04E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06870 c17d656a7ad13067792f8c5ee47dd4d0 247 Pfam PF00005 ABC transporter 22 161 1.0E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06870 c17d656a7ad13067792f8c5ee47dd4d0 247 SMART SM00382 31 212 1.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 PIRSF PIRSF001357 5 255 5.7E-77 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 Gene3D G3DSA:3.20.20.70 1 258 2.3E-81 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 SMART SM01133 10 246 1.4E-79 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 2.6E-50 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 2.5E-84 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 SUPERFAMILY SSF51569 6 246 6.49E-82 T 29-03-2018 CKQ55_RS08790 111a79d7051c398b5ee776103b303b14 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 54.203 T 29-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 Gene3D G3DSA:3.30.465.10 487 575 5.1E-8 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 SUPERFAMILY SSF116726 418 483 7.98E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 SMART SM01091 492 573 6.5E-15 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 Pfam PF03471 Transporter associated domain 493 571 7.1E-10 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 49.642 T 29-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 SUPERFAMILY SSF56176 497 571 1.39E-9 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 1.5E-58 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 Pfam PF02080 TrkA-C domain 421 483 5.6E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS24130 53885127390a4c24dc3e8cbf9ab82c3f 577 Gene3D G3DSA:3.30.70.1450 415 486 4.8E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS11980 98e5a868d2f67bd6c2023d6b40ff8430 376 SUPERFAMILY SSF53756 2 371 3.93E-141 T 29-03-2018 CKQ55_RS11980 98e5a868d2f67bd6c2023d6b40ff8430 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 3.3E-128 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CKQ55_RS11980 98e5a868d2f67bd6c2023d6b40ff8430 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 1.8E-174 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CKQ55_RS11980 98e5a868d2f67bd6c2023d6b40ff8430 376 Gene3D G3DSA:3.40.50.2000 211 356 2.9E-38 T 29-03-2018 CKQ55_RS11980 98e5a868d2f67bd6c2023d6b40ff8430 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 65.485 T 29-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CKQ55_RS11980 98e5a868d2f67bd6c2023d6b40ff8430 376 Gene3D G3DSA:3.40.50.2000 1 210 2.9E-79 T 29-03-2018 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 Gene3D G3DSA:3.40.190.10 107 199 7.1E-39 T 29-03-2018 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 Gene3D G3DSA:3.30.160.40 221 304 4.1E-26 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 SUPERFAMILY SSF53850 5 219 1.32E-86 T 29-03-2018 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 3.9E-114 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 SUPERFAMILY SSF54782 220 307 6.93E-28 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.3E-49 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 4.2E-79 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.6E-22 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 PIRSF PIRSF001438 1 311 1.0E-122 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 40.209 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11900 4806ee6fe52fd808fea3bfb735bf5973 313 Gene3D G3DSA:3.40.190.10 2 106 1.5E-44 T 29-03-2018 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 Pfam PF11842 Domain of unknown function (DUF3362) 594 708 1.5E-43 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 Pfam PF04055 Radical SAM superfamily 380 585 5.4E-19 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 SMART SM00729 376 626 1.8E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 SUPERFAMILY SSF102114 371 440 2.88E-10 T 29-03-2018 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 SUPERFAMILY SSF102114 470 624 2.88E-10 T 29-03-2018 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 646 50.717 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 1.5E-265 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 Pfam PF08497 Radical SAM N-terminal 29 379 4.3E-145 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CKQ55_RS16870 cf606d3291a60f2d4f5c0750f9b2b986 727 Gene3D G3DSA:3.20.20.70 306 723 1.5E-29 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS20470 697653f703c022b807cfff2a82cd0ae1 230 Gene3D G3DSA:2.60.120.10 87 230 4.5E-33 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS20470 697653f703c022b807cfff2a82cd0ae1 230 Pfam PF06249 Ethanolamine utilisation protein EutQ 82 229 4.5E-66 T 29-03-2018 IPR010424 Ethanolamine utilisation EutQ CKQ55_RS20470 697653f703c022b807cfff2a82cd0ae1 230 SUPERFAMILY SSF51182 106 227 4.89E-29 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS17115 1a19603b5b117994a34f4b83b1882388 378 SUPERFAMILY SSF102114 5 376 3.01E-111 T 29-03-2018 CKQ55_RS17115 1a19603b5b117994a34f4b83b1882388 378 Pfam PF04055 Radical SAM superfamily 11 179 2.4E-19 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS17115 1a19603b5b117994a34f4b83b1882388 378 Pfam PF06969 HemN C-terminal domain 305 364 4.2E-9 T 29-03-2018 IPR010723 HemN, C-terminal CKQ55_RS17115 1a19603b5b117994a34f4b83b1882388 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 5.2E-142 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CKQ55_RS17115 1a19603b5b117994a34f4b83b1882388 378 Gene3D G3DSA:3.20.20.70 5 316 5.1E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS17115 1a19603b5b117994a34f4b83b1882388 378 SMART SM00729 6 223 7.5E-57 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 Gene3D G3DSA:1.10.601.10 10 122 6.3E-34 T 29-03-2018 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 Pfam PF04545 Sigma-70, region 4 228 280 6.6E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 SUPERFAMILY SSF88659 200 283 7.29E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 2.8E-130 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.233 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 Gene3D G3DSA:1.10.10.10 222 284 8.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 1.1E-34 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 Pfam PF04542 Sigma-70 region 2 53 122 1.9E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 SUPERFAMILY SSF88946 15 122 5.49E-39 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS14765 c07155df87ef27ab6c486114c9427cdc 284 PIRSF PIRSF000770 13 284 3.9E-34 T 29-03-2018 CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 SUPERFAMILY SSF53613 2 288 8.26E-59 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 Pfam PF00294 pfkB family carbohydrate kinase 11 288 2.8E-43 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 Gene3D G3DSA:3.40.1190.20 44 304 1.2E-37 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 7.7E-96 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.2E-96 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 PIRSF PIRSF000535 1 304 1.8E-69 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CKQ55_RS16255 e2c41b2317e40a2d5686ba7b8b8ec36d 304 Gene3D G3DSA:2.20.150.10 10 43 3.5E-9 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 Pfam PF12693 GspL periplasmic domain 243 396 3.1E-36 T 29-03-2018 IPR025691 GspL periplasmic domain CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 SUPERFAMILY SSF53067 150 235 1.42E-15 T 29-03-2018 CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 PIRSF PIRSF015761 26 177 1.8E-14 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 PIRSF PIRSF015761 213 398 2.8E-21 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 SUPERFAMILY SSF53067 11 147 3.75E-30 T 29-03-2018 CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 Pfam PF05134 Type II secretion system (T2SS), protein L 12 236 5.8E-55 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CKQ55_RS04800 07184b1172500fbba6b139e441b5b9f5 401 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 16 395 2.0E-79 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CKQ55_RS23475 64f10585a1bcb0e1139d89fc9e1d1e16 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 3.6E-39 T 29-03-2018 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 SMART SM01008 20 126 5.7E-30 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 SUPERFAMILY SSF56003 130 761 5.1E-172 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 SUPERFAMILY SSF56176 786 954 1.36E-44 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 124 6.9E-21 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 SUPERFAMILY SSF55447 963 1066 1.96E-10 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.365.10 267 429 2.2E-47 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 SMART SM01092 962 1064 1.4E-4 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 143 703 8.1E-160 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 791 954 1.4E-42 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.365.10 454 589 4.9E-30 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 PIRSF PIRSF000127 2 779 6.8E-119 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 PIRSF PIRSF000127 762 1070 5.5E-21 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.390.50 960 1068 3.4E-13 T 29-03-2018 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.365.10 157 266 5.1E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 SUPERFAMILY SSF54665 4 148 7.46E-37 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.90.1170.50 4 125 4.8E-31 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.465.10 838 955 1.3E-33 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.365.10 590 778 3.1E-44 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Gene3D G3DSA:3.30.43.10 793 829 3.7E-5 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CKQ55_RS24275 3891660bd08cb106af10e25a8e4a6c04 1070 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 985 1064 1.6E-7 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CKQ55_RS20830 fdfb577550d4c1fb8bb4dd6a85fddc30 253 PRINTS PR01805 VacJ lipoprotein signature 32 45 4.7E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CKQ55_RS20830 fdfb577550d4c1fb8bb4dd6a85fddc30 253 PRINTS PR01805 VacJ lipoprotein signature 140 157 4.7E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CKQ55_RS20830 fdfb577550d4c1fb8bb4dd6a85fddc30 253 PRINTS PR01805 VacJ lipoprotein signature 101 118 4.7E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CKQ55_RS20830 fdfb577550d4c1fb8bb4dd6a85fddc30 253 PRINTS PR01805 VacJ lipoprotein signature 50 66 4.7E-35 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CKQ55_RS20830 fdfb577550d4c1fb8bb4dd6a85fddc30 253 Pfam PF04333 MlaA lipoprotein 31 224 1.4E-66 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CKQ55_RS09970 dee9859ff335a1eee4c0c648e2803778 269 Pfam PF04962 KduI/IolB family 5 260 9.3E-110 T 29-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CKQ55_RS09970 dee9859ff335a1eee4c0c648e2803778 269 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 14 260 2.0E-99 T 29-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CKQ55_RS09970 dee9859ff335a1eee4c0c648e2803778 269 PIRSF PIRSF036628 1 266 9.3E-111 T 29-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 CKQ55_RS09970 dee9859ff335a1eee4c0c648e2803778 269 Gene3D G3DSA:2.60.120.10 119 265 3.5E-57 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS09970 dee9859ff335a1eee4c0c648e2803778 269 Gene3D G3DSA:2.60.120.10 13 118 2.6E-38 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS09970 dee9859ff335a1eee4c0c648e2803778 269 SUPERFAMILY SSF51182 14 249 8.89E-70 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 SUPERFAMILY SSF46946 126 214 1.44E-16 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 2.2E-6 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 59.783 T 29-03-2018 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 Gene3D G3DSA:3.20.190.10 2 124 2.2E-23 T 29-03-2018 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 SUPERFAMILY SSF57716 226 262 7.79E-11 T 29-03-2018 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 Gene3D G3DSA:1.10.8.50 125 263 4.9E-34 T 29-03-2018 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 102 1.6E-10 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 SUPERFAMILY SSF81624 2 126 9.03E-26 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 SMART SM00898 2 110 9.5E-15 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 SMART SM01232 126 221 5.8E-13 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CKQ55_RS03765 72e7d3876d072d698e7acbb2ddb561f7 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 3.5E-11 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 Pfam PF00437 Type II/IV secretion system protein 120 386 1.4E-91 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 Gene3D G3DSA:3.40.50.300 220 495 6.2E-61 T 29-03-2018 CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 SUPERFAMILY SSF52540 103 488 7.96E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 SMART SM00382 247 370 2.7E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 Gene3D G3DSA:3.30.450.90 84 219 1.0E-48 T 29-03-2018 CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 488 3.4E-208 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07755 6a16e40ac2ca72bbb7e2acd314652d97 497 SUPERFAMILY SSF160246 9 73 1.94E-14 T 29-03-2018 CKQ55_RS22575 3066deb014e0facc23f3b0de49ef5083 296 Gene3D G3DSA:3.90.550.10 2 296 1.0E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22575 3066deb014e0facc23f3b0de49ef5083 296 SUPERFAMILY SSF53448 4 284 5.18E-57 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22575 3066deb014e0facc23f3b0de49ef5083 296 Pfam PF00483 Nucleotidyl transferase 5 273 1.1E-21 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 296 5.9E-135 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 297 44.127 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 SMART SM00046 6 130 2.0E-19 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 SUPERFAMILY SSF111331 7 294 4.8E-70 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 291 2.1E-103 T 29-03-2018 IPR005218 Diacylglycerol/lipid kinase CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 127 8.4E-27 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CKQ55_RS22205 91510444e295d6b943c96e66caf53e84 297 Gene3D G3DSA:3.40.50.10330 7 136 5.3E-28 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 SMART SM00857 10 163 3.3E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 SUPERFAMILY SSF53041 10 163 1.19E-31 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 Gene3D G3DSA:3.40.50.1390 9 132 5.1E-33 T 29-03-2018 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 ProSitePatterns PS00397 Site-specific recombinases active site. 13 21 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 Gene3D G3DSA:1.20.5.40 133 153 2.5E-7 T 29-03-2018 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 Gene3D G3DSA:1.10.10.60 154 207 4.0E-8 T 29-03-2018 CKQ55_RS31800 13de13677c15d7fb8deedff4bc89dc0f 220 Pfam PF00239 Resolvase, N terminal domain 11 163 8.0E-30 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS04640 120d71c82f63431cf618f8b6cbb7a268 283 SUPERFAMILY SSF53850 1 261 1.32E-53 T 29-03-2018 CKQ55_RS04640 120d71c82f63431cf618f8b6cbb7a268 283 Gene3D G3DSA:3.40.190.10 161 279 6.9E-14 T 29-03-2018 CKQ55_RS04640 120d71c82f63431cf618f8b6cbb7a268 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 261 9.3E-51 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS04640 120d71c82f63431cf618f8b6cbb7a268 283 Gene3D G3DSA:3.40.190.10 30 160 2.0E-31 T 29-03-2018 CKQ55_RS04640 120d71c82f63431cf618f8b6cbb7a268 283 SMART SM00062 35 262 7.3E-43 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS00965 c5b54045417b8d43c134895f12ebe20f 184 PIRSF PIRSF004690 1 184 8.2E-55 T 29-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CKQ55_RS00965 c5b54045417b8d43c134895f12ebe20f 184 SUPERFAMILY SSF89155 2 180 5.62E-41 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS00965 c5b54045417b8d43c134895f12ebe20f 184 Gene3D G3DSA:1.10.3480.10 1 184 3.4E-33 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS00965 c5b54045417b8d43c134895f12ebe20f 184 Pfam PF02613 Nitrate reductase delta subunit 36 147 2.2E-11 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 755 902 1.1E-14 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 SMART SM01359 754 902 2.2E-34 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Gene3D G3DSA:2.60.40.10 1015 1118 9.7E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Gene3D G3DSA:1.50.10.20 1163 1470 8.0E-24 T 29-03-2018 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1179 1196 1.3E-4 T 29-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Gene3D G3DSA:2.60.40.10 382 476 8.7E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Pfam PF00207 Alpha-2-macroglobulin family 972 1052 5.7E-7 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Gene3D G3DSA:2.60.40.10 292 361 0.25 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 SMART SM01360 962 1053 3.6E-19 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 285 377 1.1E-21 T 29-03-2018 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Gene3D G3DSA:2.60.40.10 753 799 0.48 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 SUPERFAMILY SSF48239 1173 1429 8.83E-41 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 Pfam PF01835 MG2 domain 384 475 9.1E-21 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CKQ55_RS20180 6c260b9a58dc41b52101a2529d433440 1648 PIRSF PIRSF038980 1 1648 0.0 T 29-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Gene3D G3DSA:1.10.1790.10 836 932 2.6E-8 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Gene3D G3DSA:1.10.1790.10 465 559 1.2E-4 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 SUPERFAMILY SSF53062 574 665 9.24E-9 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Gene3D G3DSA:3.40.50.510 560 692 7.8E-11 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Gene3D G3DSA:3.40.50.300 104 321 5.8E-23 T 29-03-2018 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Pfam PF00874 PRD domain 850 930 8.4E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 SUPERFAMILY SSF63520 829 930 3.27E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Gene3D G3DSA:3.40.50.2300 705 802 3.8E-5 T 29-03-2018 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 SUPERFAMILY SSF52540 111 345 4.22E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 SMART SM00382 133 282 9.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Gene3D G3DSA:1.10.10.10 1 74 4.9E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 Pfam PF00158 Sigma-54 interaction domain 111 274 6.1E-47 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS17430 98fe5a8d56a9113c0aba59a39747bdf4 932 SUPERFAMILY SSF63520 468 557 2.09E-5 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 SUPERFAMILY SSF48179 184 335 4.42E-56 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.147 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 SUPERFAMILY SSF51735 8 182 1.72E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 322 3.6E-52 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 2.1E-49 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 Gene3D G3DSA:1.10.1040.10 193 338 3.5E-53 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.3E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.3E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.3E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.3E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.3E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.3E-42 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 Gene3D G3DSA:3.40.50.720 4 182 2.2E-38 T 29-03-2018 CKQ55_RS13840 d711a874f3f98e443479549cb5ccf0f5 338 PIRSF PIRSF000114 1 336 3.4E-99 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 Pfam PF01761 3-dehydroquinate synthase 67 325 1.1E-110 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 Gene3D G3DSA:3.40.50.1970 4 172 6.3E-49 T 29-03-2018 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.154 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 Gene3D G3DSA:1.20.1090.10 173 362 3.8E-70 T 29-03-2018 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 PIRSF PIRSF001455 11 363 1.4E-105 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 SUPERFAMILY SSF56796 4 356 1.44E-117 T 29-03-2018 CKQ55_RS15065 0079b3e15b8112dd9fded0f3869b6027 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 4.4E-123 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CKQ55_RS04935 5d35b597c795304022c9e5e4aab76785 192 Pfam PF16449 Fimbrillin MatB 25 190 1.6E-64 T 29-03-2018 IPR016514 Fimbrial protein MatB CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Pfam PF01131 DNA topoisomerase 157 565 9.8E-129 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 2.3E-261 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SUPERFAMILY SSF57783 744 807 2.55E-19 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SMART SM00437 272 527 9.7E-124 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 2.9E-12 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 7.3E-23 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.9E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 5.9E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 5.9E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 5.9E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.9E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 2.9E-11 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 598 622 8.0E-6 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SUPERFAMILY SSF56712 3 609 5.76E-205 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:3.30.65.10 576 645 2.3E-11 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:3.30.65.10 696 744 1.7E-9 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:3.30.65.10 745 807 1.2E-9 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SMART SM00493 3 132 1.4E-33 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:1.10.460.10 164 345 4.3E-45 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SUPERFAMILY SSF57783 809 864 1.14E-23 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SMART SM00436 133 221 4.0E-49 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:3.40.50.140 1 163 3.8E-51 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Pfam PF01751 Toprim domain 5 142 9.5E-34 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 54.808 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:2.70.20.10 346 473 1.6E-38 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 Gene3D G3DSA:2.20.25.10 809 863 1.5E-31 T 29-03-2018 CKQ55_RS29450 20ad7342aeb291cc1b55ae99d7334891 865 SUPERFAMILY SSF57783 704 743 5.78E-7 T 29-03-2018 CKQ55_RS25445 8ac847a98a2b3e82971f64988b43ec7c 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 2.5E-8 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS25445 8ac847a98a2b3e82971f64988b43ec7c 127 Gene3D G3DSA:3.10.180.10 1 127 3.0E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS25445 8ac847a98a2b3e82971f64988b43ec7c 127 SUPERFAMILY SSF54593 1 127 1.48E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 3.3E-66 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 SUPERFAMILY SSF53822 24 359 1.72E-87 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 Gene3D G3DSA:3.40.50.2300 22 172 4.9E-36 T 29-03-2018 CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 Pfam PF13458 Periplasmic binding protein 26 346 1.8E-55 T 29-03-2018 IPR028081 Leucine-binding protein domain CKQ55_RS14785 e7e1f7f088d48144a8b7b1941a925ff7 367 Gene3D G3DSA:3.40.50.2300 173 348 3.4E-18 T 29-03-2018 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.5E-33 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 SUPERFAMILY SSF54719 95 204 3.27E-45 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 PIRSF PIRSF000349 1 206 7.7E-80 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 SUPERFAMILY SSF46609 1 90 1.03E-36 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.9E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 3.9E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 3.9E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.9E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 3.9E-27 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 Gene3D G3DSA:1.10.287.990 20 90 6.4E-31 T 29-03-2018 CKQ55_RS12345 a902c2791e1bcdd282a50362fe3a9b60 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 3.6E-40 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 PIRSF PIRSF004654 1 292 2.6E-119 T 29-03-2018 IPR023605 Lipoprotein NlpI CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 SUPERFAMILY SSF48452 27 283 1.87E-77 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 SMART SM00028 234 267 21.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 SMART SM00028 62 95 0.0033 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 SMART SM00028 96 129 2.0E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 Gene3D G3DSA:1.25.40.10 20 294 2.1E-50 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 29-03-2018 IPR013105 Tetratricopeptide repeat 2 CKQ55_RS16115 db4f7abc7c7ccc218cddb16f64ea3c3a 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS13605 831e62cd2caf6063a474e56a2fcb506f 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 16 432 8.2E-23 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Gene3D G3DSA:2.30.30.30 2 63 1.6E-15 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 3.5E-13 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Gene3D G3DSA:2.40.50.140 66 131 1.3E-14 T 29-03-2018 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 SMART SM00841 133 188 7.7E-27 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.1E-18 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 PIRSF PIRSF005901 1 190 8.4E-60 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.859 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Gene3D G3DSA:2.40.50.140 133 188 1.8E-20 T 29-03-2018 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 SUPERFAMILY SSF50249 68 130 6.85E-11 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 SMART SM01185 69 125 9.3E-14 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 4.3E-99 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 5.6E-16 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 SUPERFAMILY SSF50249 132 189 1.1E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS21680 9bdc9b280778cc5a4c3af384f33b3bdc 190 SUPERFAMILY SSF50104 1 65 3.49E-11 T 29-03-2018 IPR008991 Translation protein SH3-like domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 SMART SM00052 468 709 1.3E-98 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 456 2.1E-34 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 SMART SM00267 288 458 6.3E-43 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 SUPERFAMILY SSF141868 473 715 1.16E-79 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 SUPERFAMILY SSF55073 304 460 8.16E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 Pfam PF05228 CHASE4 domain 61 216 1.2E-12 T 29-03-2018 IPR007892 CHASE4 CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 Gene3D G3DSA:3.30.70.270 297 466 1.9E-47 T 29-03-2018 CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 Gene3D G3DSA:3.20.20.450 467 718 2.1E-87 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 299 453 1.1E-35 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26115 5b1fad5ed41d0a4538acc5de6782c1ac 718 Pfam PF00563 EAL domain 476 704 4.3E-66 T 29-03-2018 IPR001633 EAL domain CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 SUPERFAMILY SSF109604 212 365 4.94E-28 T 29-03-2018 CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 SMART SM00471 217 352 7.3E-11 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 SMART SM00471 20 140 2.9E-4 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 Pfam PF01966 HD domain 222 342 5.6E-17 T 29-03-2018 IPR006674 HD domain CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 Pfam PF01966 HD domain 27 130 1.1E-7 T 29-03-2018 IPR006674 HD domain CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 TIGRFAM TIGR00277 HDIG: HDIG domain 221 312 1.2E-7 T 29-03-2018 IPR006675 HDIG domain CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 Gene3D G3DSA:1.10.3210.10 164 394 1.1E-40 T 29-03-2018 CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 Gene3D G3DSA:1.10.3210.10 1 163 5.3E-17 T 29-03-2018 CKQ55_RS30055 0ae1b60fd92925d5f7d13b446649110c 396 SUPERFAMILY SSF109604 24 158 5.8E-15 T 29-03-2018 CKQ55_RS04340 09157f318925861cd877856fb061cbdf 453 SUPERFAMILY SSF103473 19 436 7.19E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS04340 09157f318925861cd877856fb061cbdf 453 Gene3D G3DSA:1.20.1250.20 237 452 6.8E-24 T 29-03-2018 CKQ55_RS04340 09157f318925861cd877856fb061cbdf 453 PIRSF PIRSF002808 12 452 2.2E-102 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS04340 09157f318925861cd877856fb061cbdf 453 Pfam PF07690 Major Facilitator Superfamily 35 391 3.8E-35 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS04340 09157f318925861cd877856fb061cbdf 453 Gene3D G3DSA:1.20.1250.20 21 214 1.6E-26 T 29-03-2018 CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 SUPERFAMILY SSF75005 22 336 4.4E-100 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 381 444 3.4E-10 T 29-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 Gene3D G3DSA:2.115.10.20 36 362 4.9E-94 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 5.1E-96 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 15 440 6.9E-174 T 29-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 SMART SM00640 31 429 1.1E-139 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 29-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 SUPERFAMILY SSF49899 338 464 1.19E-19 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS05065 422df56878e33b68d9c21d7e78a5f4f0 466 Gene3D G3DSA:2.60.120.560 363 451 7.0E-14 T 29-03-2018 CKQ55_RS14640 8c29464b45e664c6a2cc3ccdd04b3180 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 187 1.2E-11 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CKQ55_RS14640 8c29464b45e664c6a2cc3ccdd04b3180 201 SUPERFAMILY SSF89392 20 187 2.0E-24 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CKQ55_RS14640 8c29464b45e664c6a2cc3ccdd04b3180 201 Gene3D G3DSA:2.50.20.10 18 194 1.4E-19 T 29-03-2018 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 SUPERFAMILY SSF53098 6 391 7.15E-91 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 Gene3D G3DSA:3.90.1600.10 397 602 1.6E-50 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 SUPERFAMILY SSF56672 387 779 8.34E-112 T 29-03-2018 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 Gene3D G3DSA:3.30.420.10 153 349 4.2E-38 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 Pfam PF00136 DNA polymerase family B 399 737 6.6E-39 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 SMART SM00486 150 557 6.6E-70 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08320 367d756c2dba9268651fa1c044d21ade 785 Pfam PF03104 DNA polymerase family B, exonuclease domain 206 284 1.4E-5 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS22630 b06810af266c580c306064c17b9cb824 380 SUPERFAMILY SSF53756 14 340 4.5E-28 T 29-03-2018 CKQ55_RS22630 b06810af266c580c306064c17b9cb824 380 Gene3D G3DSA:3.40.50.2000 145 344 8.8E-18 T 29-03-2018 CKQ55_RS22630 b06810af266c580c306064c17b9cb824 380 Pfam PF00534 Glycosyl transferases group 1 191 333 2.2E-13 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS29650 0a13164d1686dabb5c337dd0aa9a71b4 115 PIRSF PIRSF000699 10 115 1.4E-38 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS29650 0a13164d1686dabb5c337dd0aa9a71b4 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 4.5E-32 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS29650 0a13164d1686dabb5c337dd0aa9a71b4 115 Gene3D G3DSA:1.20.58.80 15 113 1.5E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS29650 0a13164d1686dabb5c337dd0aa9a71b4 115 SUPERFAMILY SSF46973 15 113 4.32E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 4.1E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 2.2E-18 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Gene3D G3DSA:2.40.30.10 137 256 1.5E-32 T 29-03-2018 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 64.104 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 SUPERFAMILY SSF54292 37 124 2.14E-22 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 SUPERFAMILY SSF63380 105 272 3.08E-37 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 PIRSF PIRSF000044 1 407 9.6E-221 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Gene3D G3DSA:3.40.50.80 257 401 1.3E-31 T 29-03-2018 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.9E-10 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 4.5E-231 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 SUPERFAMILY SSF52343 255 402 2.62E-39 T 29-03-2018 CKQ55_RS07295 4f8a287cac85742f773277ce94ebb567 407 Gene3D G3DSA:3.10.20.30 27 136 5.4E-21 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF55008 100 164 1.7E-18 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF81665 285 322 1.96E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF81665 419 514 1.96E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF81665 766 774 1.96E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 104 133 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Gene3D G3DSA:3.30.70.100 1 79 7.1E-14 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 826 8.2E-185 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Pfam PF00122 E1-E2 ATPase 319 499 1.9E-49 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF81653 321 418 7.06E-24 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 689 705 2.6E-7 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 717 733 2.6E-7 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 748 773 2.6E-7 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF56784 575 823 3.48E-61 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF56784 518 538 3.48E-61 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Gene3D G3DSA:1.20.1110.10 281 537 8.0E-45 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 731 8.0E-51 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Gene3D G3DSA:3.40.1110.10 538 643 1.4E-32 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 794 2.6E-88 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Gene3D G3DSA:3.40.50.1000 644 783 6.4E-48 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 SUPERFAMILY SSF55008 3 67 2.62E-12 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 826 9.7E-191 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 3.6E-25 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 3.6E-25 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 3.6E-25 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 3.6E-25 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 653 3.6E-25 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 3.6E-25 T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Pfam PF00403 Heavy-metal-associated domain 8 61 1.4E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Pfam PF00403 Heavy-metal-associated domain 103 158 1.5E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 ProSitePatterns PS01229 Hypothetical cof family signature 2. 717 739 - T 29-03-2018 CKQ55_RS05830 517e8b688c116957862ba3755f13426c 833 Gene3D G3DSA:3.30.70.100 95 166 3.6E-21 T 29-03-2018 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 Gene3D G3DSA:2.30.40.10 18 86 5.4E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 Gene3D G3DSA:3.20.20.140 87 360 3.4E-69 T 29-03-2018 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 Pfam PF01979 Amidohydrolase family 71 432 7.8E-72 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 Gene3D G3DSA:2.30.40.10 361 439 0.019 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 SUPERFAMILY SSF51556 73 376 5.11E-98 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 SUPERFAMILY SSF51338 420 434 6.14E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 SUPERFAMILY SSF51338 375 391 6.14E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 SUPERFAMILY SSF51338 30 73 6.14E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS01350 1bbf8be59ec8c1dc616c0cd625cf8ed7 439 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 30 429 5.5E-177 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CKQ55_RS07000 a053f5fb0c259263f069a398fc6c0e59 269 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 261 7.0E-101 T 29-03-2018 IPR010247 N-formylglutamate deformylase CKQ55_RS07000 a053f5fb0c259263f069a398fc6c0e59 269 Gene3D G3DSA:3.40.630.40 1 264 4.4E-73 T 29-03-2018 CKQ55_RS07000 a053f5fb0c259263f069a398fc6c0e59 269 SUPERFAMILY SSF53187 6 262 1.97E-75 T 29-03-2018 CKQ55_RS07000 a053f5fb0c259263f069a398fc6c0e59 269 Pfam PF05013 N-formylglutamate amidohydrolase 13 230 1.8E-63 T 29-03-2018 IPR007709 N-formylglutamate amidohydrolase CKQ55_RS07700 19a8139d63ad45de9ed1a282ce39da2c 660 Pfam PF01032 FecCD transport family 358 657 1.1E-73 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS07700 19a8139d63ad45de9ed1a282ce39da2c 660 Pfam PF01032 FecCD transport family 16 323 1.9E-65 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS07700 19a8139d63ad45de9ed1a282ce39da2c 660 Gene3D G3DSA:1.10.3470.10 1 331 1.7E-48 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS07700 19a8139d63ad45de9ed1a282ce39da2c 660 Gene3D G3DSA:1.10.3470.10 342 660 6.5E-49 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS07700 19a8139d63ad45de9ed1a282ce39da2c 660 SUPERFAMILY SSF81345 345 657 1.44E-71 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS07700 19a8139d63ad45de9ed1a282ce39da2c 660 SUPERFAMILY SSF81345 8 325 6.8E-60 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 564 576 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 SUPERFAMILY SSF51261 497 645 1.92E-51 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 SUPERFAMILY SSF55604 392 465 9.29E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 Gene3D G3DSA:3.30.1360.60 390 466 3.5E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 Gene3D G3DSA:2.70.70.10 488 649 2.5E-55 T 29-03-2018 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 1.8E-210 T 29-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 502 622 6.5E-48 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 7.3E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 Pfam PF00367 phosphotransferase system, EIIB 396 427 1.4E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 501 626 2.5E-47 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS03970 5a0b09f3cb966f68e75bfb7af163f55d 650 Pfam PF02378 Phosphotransferase system, EIIC 12 300 3.4E-74 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 PIRSF PIRSF006250 17 297 1.0E-107 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 2.5E-60 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 Gene3D G3DSA:3.20.20.70 157 286 3.5E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 SUPERFAMILY SSF54675 13 130 4.47E-32 T 29-03-2018 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 1.2E-23 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 Gene3D G3DSA:3.90.1170.20 10 156 1.0E-42 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 1.2E-100 T 29-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CKQ55_RS08050 f58b7a7439dfa637b7151d0980d0aa19 297 SUPERFAMILY SSF51690 131 296 2.63E-60 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CKQ55_RS13455 58cf71ce45721eec21d40902a3b7d1d2 100 SUPERFAMILY SSF54909 6 99 1.38E-29 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS13455 58cf71ce45721eec21d40902a3b7d1d2 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 80 2.6E-17 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CKQ55_RS13455 58cf71ce45721eec21d40902a3b7d1d2 100 Gene3D G3DSA:3.30.70.100 2 100 3.8E-23 T 29-03-2018 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.7E-15 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Gene3D G3DSA:1.10.10.60 383 469 2.0E-25 T 29-03-2018 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Gene3D G3DSA:3.40.50.300 136 312 1.1E-28 T 29-03-2018 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 SUPERFAMILY SSF52172 7 185 7.54E-47 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 SMART SM00382 160 311 7.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Pfam PF00158 Sigma-54 interaction domain 140 306 8.1E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Gene3D G3DSA:1.10.8.60 313 382 2.5E-22 T 29-03-2018 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 SMART SM00448 4 115 1.7E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Pfam PF00072 Response regulator receiver domain 8 115 1.3E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 SUPERFAMILY SSF52540 139 383 1.22E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 Gene3D G3DSA:3.40.50.2300 6 135 4.4E-37 T 29-03-2018 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 SUPERFAMILY SSF46689 380 469 9.32E-25 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12735 c8f58ed490b07e8580ddf0f66cd47fb3 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 466 2.4E-244 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CKQ55_RS02065 ec48489f12957e09a36acc291e79a2af 297 Gene3D G3DSA:1.50.10.20 6 279 1.5E-5 T 29-03-2018 CKQ55_RS02065 ec48489f12957e09a36acc291e79a2af 297 Pfam PF01636 Phosphotransferase enzyme family 64 251 5.6E-9 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CKQ55_RS02065 ec48489f12957e09a36acc291e79a2af 297 SUPERFAMILY SSF56112 4 270 2.55E-23 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 307 2.4E-107 T 29-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 PIRSF PIRSF000102 2 313 2.4E-93 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 Gene3D G3DSA:3.90.110.10 148 313 1.4E-41 T 29-03-2018 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 146 2.6E-32 T 29-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 2.3E-37 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 2.3E-37 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 2.3E-37 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 2.3E-37 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 2.3E-37 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 311 5.8E-21 T 29-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 SUPERFAMILY SSF56327 147 311 4.76E-45 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 38.169 T 29-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 Gene3D G3DSA:3.40.50.720 7 147 1.3E-29 T 29-03-2018 CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 SUPERFAMILY SSF51735 3 146 3.4E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26510 c4ab8d00e9e33eb98727d4440f0bbfda 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 29-03-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 Gene3D G3DSA:3.40.50.920 545 667 8.4E-32 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 666 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 SUPERFAMILY SSF52518 340 530 1.13E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 Gene3D G3DSA:3.40.50.970 1 367 4.1E-128 T 29-03-2018 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 SUPERFAMILY SSF52518 9 324 7.77E-120 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 Pfam PF02780 Transketolase, C-terminal domain 544 659 2.6E-19 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 338 4.9E-171 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 ProSitePatterns PS00802 Transketolase signature 2. 471 487 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 SUPERFAMILY SSF52922 537 667 3.4E-43 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 SMART SM00861 359 529 1.0E-65 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 Gene3D G3DSA:3.40.50.970 368 544 1.8E-41 T 29-03-2018 CKQ55_RS00585 9f186b2a38084cddf9952340b2f48da2 667 Pfam PF02779 Transketolase, pyrimidine binding domain 358 528 3.9E-44 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS21860 6c007157398e464c82417860369bc255 277 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 29-03-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 Pfam PF00874 PRD domain 87 161 1.1E-21 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 Pfam PF00874 PRD domain 179 271 2.3E-19 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 SUPERFAMILY SSF50151 1 54 9.29E-18 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 Pfam PF03123 CAT RNA binding domain 1 54 2.0E-23 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 SMART SM01061 1 59 3.2E-29 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 SUPERFAMILY SSF63520 59 166 1.83E-27 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 SUPERFAMILY SSF63520 170 273 3.66E-27 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 Gene3D G3DSA:2.30.24.10 1 62 7.2E-24 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 Gene3D G3DSA:1.10.1790.10 163 275 4.0E-26 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS21860 6c007157398e464c82417860369bc255 277 Gene3D G3DSA:1.10.1790.10 63 162 4.2E-24 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 SUPERFAMILY SSF55486 4 495 2.08E-122 T 29-03-2018 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 494 8.4E-96 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PIRSF PIRSF006615 2 495 8.2E-193 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 264 283 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 244 263 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 331 350 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 307 3.6E-43 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CKQ55_RS26140 726b3f84313066c33d09bd2efa5a8775 495 Gene3D G3DSA:1.10.1370.10 45 493 1.0E-26 T 29-03-2018 CKQ55_RS17150 c5213aedaf11f4c38a4619a2f57fddc7 138 SMART SM00732 3 103 1.0E-42 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CKQ55_RS17150 c5213aedaf11f4c38a4619a2f57fddc7 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 25.924 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CKQ55_RS17150 c5213aedaf11f4c38a4619a2f57fddc7 138 SUPERFAMILY SSF53098 3 136 5.16E-43 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS17150 c5213aedaf11f4c38a4619a2f57fddc7 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 9.8E-59 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CKQ55_RS17150 c5213aedaf11f4c38a4619a2f57fddc7 138 Gene3D G3DSA:3.30.420.140 1 138 4.8E-43 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CKQ55_RS17150 c5213aedaf11f4c38a4619a2f57fddc7 138 Pfam PF03652 Holliday junction resolvase 4 135 1.3E-42 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 SUPERFAMILY SSF53383 84 431 8.53E-65 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 Pfam PF00155 Aminotransferase class I and II 116 423 3.0E-30 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 SUPERFAMILY SSF46785 8 73 9.41E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 Gene3D G3DSA:3.90.1150.10 343 430 6.9E-14 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 Gene3D G3DSA:3.40.640.10 103 342 9.3E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 5.7E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 6.0E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 6.0E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 SMART SM00345 10 69 7.1E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS20615 6edbe9db681fb2382e0b88b3354b3be4 432 Gene3D G3DSA:1.10.10.10 4 71 4.0E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 Gene3D G3DSA:3.40.50.1400 173 300 3.4E-40 T 29-03-2018 CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.099 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 29-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 SUPERFAMILY SSF53800 4 318 5.63E-101 T 29-03-2018 CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 Pfam PF00762 Ferrochelatase 5 317 1.4E-109 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 319 2.3E-123 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CKQ55_RS05890 7949078e562b8a6493ccb32eb21f7ae3 320 Gene3D G3DSA:3.40.50.1400 1 172 1.2E-47 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 SUPERFAMILY SSF51905 3 315 1.19E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 Gene3D G3DSA:3.40.50.720 144 321 1.3E-23 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.4E-41 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.4E-41 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.4E-41 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.4E-41 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.4E-41 T 29-03-2018 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 1.2E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.1E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 Gene3D G3DSA:3.50.50.60 2 136 8.0E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02230 5910e1ec7ce12416166f60ff7f2d5125 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 3.7E-124 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 Gene3D G3DSA:3.30.360.10 144 314 2.4E-42 T 29-03-2018 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 1.5E-23 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 SMART SM00859 6 121 1.5E-29 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 SUPERFAMILY SSF55347 131 319 1.64E-48 T 29-03-2018 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 Gene3D G3DSA:3.40.50.720 1 143 1.1E-28 T 29-03-2018 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 2.5E-36 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 PIRSF PIRSF000148 4 337 7.0E-94 T 29-03-2018 CKQ55_RS20920 97dbc9e84339200e8e674d1da555a20d 337 SUPERFAMILY SSF51735 5 157 1.19E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Pfam PF13534 4Fe-4S dicluster domain 264 324 5.8E-8 T 29-03-2018 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Gene3D G3DSA:2.40.50.100 377 450 3.4E-4 T 29-03-2018 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Pfam PF10531 SLBB domain 174 219 2.6E-11 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 SUPERFAMILY SSF142984 172 240 3.4E-13 T 29-03-2018 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Gene3D G3DSA:1.10.1060.10 253 347 7.8E-10 T 29-03-2018 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Gene3D G3DSA:3.10.560.10 159 252 3.8E-5 T 29-03-2018 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 SUPERFAMILY SSF142019 8 178 1.96E-45 T 29-03-2018 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 21 160 3.2E-37 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 PIRSF PIRSF036408 12 450 6.9E-194 T 29-03-2018 IPR017054 Propanediol utilization protein, PduS, predicted CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 Pfam PF13375 RnfC Barrel sandwich hybrid domain 381 447 6.0E-14 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CKQ55_RS18195 bee9904d193a855cc9b339adbb9954a5 451 SUPERFAMILY SSF46548 214 340 1.01E-12 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:3.30.1490.20 656 745 7.5E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.9E-40 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.364 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SMART SM01096 424 547 1.7E-73 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SMART SM00851 956 1042 2.4E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:3.30.470.20 746 936 8.0E-44 T 29-03-2018 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:1.10.1030.10 404 538 9.0E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SUPERFAMILY SSF56059 128 401 1.68E-109 T 29-03-2018 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Pfam PF02142 MGS-like domain 957 1041 4.4E-18 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SUPERFAMILY SSF52440 1 127 5.61E-50 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:3.30.470.20 119 403 9.0E-67 T 29-03-2018 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:3.40.50.1380 937 1073 8.5E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SUPERFAMILY SSF56059 674 934 5.83E-104 T 29-03-2018 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:3.40.50.20 4 109 2.9E-40 T 29-03-2018 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SUPERFAMILY SSF52335 938 1071 5.23E-35 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Gene3D G3DSA:3.40.50.20 539 655 1.9E-62 T 29-03-2018 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SUPERFAMILY SSF52440 557 676 1.44E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 3.7E-38 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.0E-77 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 SUPERFAMILY SSF48108 396 554 1.7E-52 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.18 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS08420 b07a9c341f25a7d69b0e490cdd7c7b62 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS23065 cdcc1e1b8aaa3423b3b10fb2427460c8 180 Pfam PF00419 Fimbrial protein 31 180 4.4E-23 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23065 cdcc1e1b8aaa3423b3b10fb2427460c8 180 SUPERFAMILY SSF49401 30 180 6.46E-37 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS23065 cdcc1e1b8aaa3423b3b10fb2427460c8 180 Gene3D G3DSA:2.60.40.1090 29 180 1.1E-38 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07500 cdf5b8bf448710418f61b2d23cf143cd 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.522 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CKQ55_RS07500 cdf5b8bf448710418f61b2d23cf143cd 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-28 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CKQ55_RS07500 cdf5b8bf448710418f61b2d23cf143cd 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.3E-34 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CKQ55_RS20840 9958fbc6c7d5abb4f55cd74f6b24a192 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 1.3E-44 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CKQ55_RS20840 9958fbc6c7d5abb4f55cd74f6b24a192 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 7.6E-38 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CKQ55_RS20840 9958fbc6c7d5abb4f55cd74f6b24a192 94 Gene3D G3DSA:3.30.70.860 15 94 2.5E-32 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Gene3D G3DSA:3.30.160.70 180 266 3.3E-17 T 29-03-2018 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 SUPERFAMILY SSF53155 188 267 6.28E-20 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 SMART SM00342 99 181 2.7E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 PIRSF PIRSF000409 1 354 1.7E-128 T 29-03-2018 IPR016221 Bifunctional regulatory protein Ada CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Gene3D G3DSA:1.10.10.60 139 179 0.031 T 29-03-2018 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Gene3D G3DSA:1.10.10.60 80 138 4.6E-18 T 29-03-2018 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 SUPERFAMILY SSF46767 268 348 3.01E-29 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Pfam PF02805 Metal binding domain of Ada 12 75 2.2E-29 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Gene3D G3DSA:1.10.10.10 267 353 5.4E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Gene3D G3DSA:3.40.10.10 1 77 2.3E-25 T 29-03-2018 IPR035451 Ada-like domain CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Pfam PF12833 Helix-turn-helix domain 105 182 6.5E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 2.1E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 197 266 2.4E-8 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 SUPERFAMILY SSF57884 1 92 1.27E-31 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 9.0E-30 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS21425 58b4e07fdb54e6f623d8fccda6a8d62b 354 SUPERFAMILY SSF46689 85 133 8.24E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 Gene3D G3DSA:3.40.50.620 2 158 8.8E-34 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.8E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.8E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.8E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.8E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.8E-51 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.0E-60 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 6.3E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 SUPERFAMILY SSF52374 3 157 5.09E-45 T 29-03-2018 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 Pfam PF01467 Cytidylyltransferase-like 6 134 5.9E-21 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.006 T 29-03-2018 CKQ55_RS13725 db414ad6b8b5acb671ec457e66e63090 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 158 34.094 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.283 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 Gene3D G3DSA:3.40.50.261 120 289 6.6E-55 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 SUPERFAMILY SSF51735 1 122 8.16E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 Pfam PF02629 CoA binding domain 6 99 7.7E-32 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.5E-39 T 29-03-2018 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.5E-39 T 29-03-2018 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.5E-39 T 29-03-2018 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.5E-39 T 29-03-2018 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 Gene3D G3DSA:3.40.50.720 1 119 5.3E-45 T 29-03-2018 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 SMART SM00881 4 100 6.5E-38 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 SUPERFAMILY SSF52210 123 287 5.89E-56 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 Pfam PF00549 CoA-ligase 151 270 5.3E-20 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 PIRSF PIRSF001553 1 289 1.0E-134 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS03715 aa5d6c2c156a939a2b9f72dd4e993d62 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.6E-145 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 Pfam PF00107 Zinc-binding dehydrogenase 173 300 8.5E-22 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 SUPERFAMILY SSF51735 140 304 5.97E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 Gene3D G3DSA:3.90.180.10 1 147 6.8E-47 T 29-03-2018 CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 132 1.7E-32 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 SUPERFAMILY SSF50129 3 172 1.46E-52 T 29-03-2018 IPR011032 GroES-like CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 Gene3D G3DSA:3.40.50.720 148 328 6.1E-32 T 29-03-2018 CKQ55_RS08985 e0b86c519d04cb07ff2a09a21658c542 340 SMART SM00829 10 310 0.002 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 Gene3D G3DSA:1.20.1080.10 1 257 3.2E-76 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 Pfam PF00230 Major intrinsic protein 6 249 1.8E-63 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 PRINTS PR00783 Major intrinsic protein family signature 149 167 7.6E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 PRINTS PR00783 Major intrinsic protein family signature 182 204 7.6E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 PRINTS PR00783 Major intrinsic protein family signature 7 26 7.6E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 PRINTS PR00783 Major intrinsic protein family signature 46 70 7.6E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 PRINTS PR00783 Major intrinsic protein family signature 232 252 7.6E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 PRINTS PR00783 Major intrinsic protein family signature 83 102 7.6E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 ProSitePatterns PS00221 MIP family signature. 64 72 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 SUPERFAMILY SSF81338 6 255 3.14E-75 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS18290 75707ce52967c1b2c0f95a86329c7225 266 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 1.1E-66 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS24010 54eb1c9c0c25f47b7f92b731c6b64f8d 291 Gene3D G3DSA:1.10.3720.10 10 291 1.6E-50 T 29-03-2018 CKQ55_RS24010 54eb1c9c0c25f47b7f92b731c6b64f8d 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 288 1.2E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24010 54eb1c9c0c25f47b7f92b731c6b64f8d 291 SUPERFAMILY SSF161098 52 279 4.06E-58 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 Gene3D G3DSA:3.40.50.720 1 275 1.0E-54 T 29-03-2018 CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 176 273 5.4E-22 T 29-03-2018 CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 4.7E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 4.7E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.7E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 204 4.7E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 236 256 4.7E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.7E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 Pfam PF00106 short chain dehydrogenase 11 169 4.1E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 SUPERFAMILY SSF51735 9 274 1.3E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 204 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS09495 b4b01200985d94ed62533b6733c8d878 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS10870 f10b9b14d209ebc154be403d02af2547 187 SMART SM00072 2 179 3.7E-29 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CKQ55_RS10870 f10b9b14d209ebc154be403d02af2547 187 SUPERFAMILY SSF52540 3 176 1.96E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10870 f10b9b14d209ebc154be403d02af2547 187 Gene3D G3DSA:3.40.50.300 4 187 2.9E-26 T 29-03-2018 CKQ55_RS10870 f10b9b14d209ebc154be403d02af2547 187 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 176 33.791 T 29-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS10870 f10b9b14d209ebc154be403d02af2547 187 Pfam PF13238 AAA domain 6 137 9.2E-8 T 29-03-2018 CKQ55_RS10870 f10b9b14d209ebc154be403d02af2547 187 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 176 7.1E-69 T 29-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS14220 b407908466a230d94e825975274f64a4 157 Pfam PF03500 Cellulose synthase subunit D 43 135 2.7E-10 T 29-03-2018 IPR022798 Cellulose synthase subunit D, bacterial CKQ55_RS14220 b407908466a230d94e825975274f64a4 157 Gene3D G3DSA:3.30.1380.20 12 142 9.9E-4 T 29-03-2018 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 55.853 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 1.3E-134 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 307 1.8E-145 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 Gene3D G3DSA:3.50.14.10 7 186 1.7E-61 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 SUPERFAMILY SSF56596 5 307 1.7E-121 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 Gene3D G3DSA:3.30.54.10 268 308 8.3E-8 T 29-03-2018 CKQ55_RS25835 189cca6eba23fdf81b9ef95b7414cb08 310 Gene3D G3DSA:3.30.54.10 187 246 2.5E-31 T 29-03-2018 CKQ55_RS08865 3140b511d465653398fa5974c4aeba0c 348 Gene3D G3DSA:3.30.70.270 172 347 3.5E-49 T 29-03-2018 CKQ55_RS08865 3140b511d465653398fa5974c4aeba0c 348 SMART SM00267 178 348 5.9E-54 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS08865 3140b511d465653398fa5974c4aeba0c 348 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 343 2.4E-45 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS08865 3140b511d465653398fa5974c4aeba0c 348 SUPERFAMILY SSF55073 194 345 3.66E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS08865 3140b511d465653398fa5974c4aeba0c 348 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 345 1.6E-46 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Gene3D G3DSA:3.40.50.10490 240 457 4.5E-60 T 29-03-2018 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.288 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 SUPERFAMILY SSF53697 245 609 1.11E-113 T 29-03-2018 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.8E-266 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Gene3D G3DSA:3.60.20.10 2 239 2.1E-68 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 SUPERFAMILY SSF56235 2 232 1.46E-75 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Gene3D G3DSA:3.40.50.10490 458 607 1.3E-52 T 29-03-2018 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Pfam PF01380 SIS domain 462 591 3.4E-29 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Pfam PF01380 SIS domain 289 418 3.9E-34 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS12955 596d948e355e07d1d3c23c9cb92a2df3 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 2.0E-21 T 29-03-2018 CKQ55_RS23975 c83b7e049dfb46c277ba5abb4b834e0a 454 Pfam PF03315 Serine dehydratase beta chain 3 155 2.5E-57 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CKQ55_RS23975 c83b7e049dfb46c277ba5abb4b834e0a 454 Gene3D G3DSA:1.10.4100.10 262 444 1.4E-32 T 29-03-2018 CKQ55_RS23975 c83b7e049dfb46c277ba5abb4b834e0a 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 5.3E-95 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CKQ55_RS23975 c83b7e049dfb46c277ba5abb4b834e0a 454 Gene3D G3DSA:3.30.1330.90 10 158 1.1E-52 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CKQ55_RS23975 c83b7e049dfb46c277ba5abb4b834e0a 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.9E-228 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CKQ55_RS23975 c83b7e049dfb46c277ba5abb4b834e0a 454 SUPERFAMILY SSF143548 16 158 1.39E-46 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 SUPERFAMILY SSF50156 403 475 1.45E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 397 468 4.1E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 5.1E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 5.1E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 5.1E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 5.1E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 5.1E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 5.1E-60 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Pfam PF13365 Trypsin-like peptidase domain 119 255 5.2E-33 T 29-03-2018 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Gene3D G3DSA:2.30.42.10 394 479 3.4E-17 T 29-03-2018 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Gene3D G3DSA:2.40.10.10 28 165 8.2E-33 T 29-03-2018 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 SMART SM00228 294 376 1.6E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 SMART SM00228 401 471 1.3E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 SUPERFAMILY SSF50156 276 385 2.4E-23 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 SUPERFAMILY SSF50494 36 60 1.76E-65 T 29-03-2018 IPR009003 Peptidase S1, PA clan CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 SUPERFAMILY SSF50494 116 303 1.76E-65 T 29-03-2018 IPR009003 Peptidase S1, PA clan CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Pfam PF13180 PDZ domain 296 385 2.9E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 477 8.5E-167 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Gene3D G3DSA:2.30.42.10 289 393 3.1E-27 T 29-03-2018 CKQ55_RS07655 e64aa563c6b771ee5bb910dde777070b 479 Gene3D G3DSA:2.40.10.10 166 284 2.3E-43 T 29-03-2018 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 2.1E-20 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 Gene3D G3DSA:2.30.140.10 1 54 4.8E-17 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 Pfam PF01564 Spermine/spermidine synthase domain 60 239 3.7E-66 T 29-03-2018 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 29-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 SUPERFAMILY SSF53335 7 283 8.34E-90 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 Gene3D G3DSA:3.40.50.150 55 286 2.2E-45 T 29-03-2018 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 9.2E-122 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CKQ55_RS07950 83ec9597a19e2f9ed2b7b21bd7eb84af 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 38.993 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CKQ55_RS13745 18550696c2618a26e90b556c6deb7a06 364 SUPERFAMILY SSF53756 2 361 2.62E-56 T 29-03-2018 CKQ55_RS13745 18550696c2618a26e90b556c6deb7a06 364 Pfam PF13439 Glycosyltransferase Family 4 13 182 1.7E-14 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CKQ55_RS13745 18550696c2618a26e90b556c6deb7a06 364 Gene3D G3DSA:3.40.50.2000 1 188 4.7E-10 T 29-03-2018 CKQ55_RS13745 18550696c2618a26e90b556c6deb7a06 364 Pfam PF00534 Glycosyl transferases group 1 197 336 2.7E-21 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS13745 18550696c2618a26e90b556c6deb7a06 364 Gene3D G3DSA:3.40.50.2000 189 349 3.3E-28 T 29-03-2018 CKQ55_RS01920 81362cbc2d0af2224d566638982b84b5 172 Pfam PF07977 FabA-like domain 29 158 2.9E-52 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS01920 81362cbc2d0af2224d566638982b84b5 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 1.4E-96 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS01920 81362cbc2d0af2224d566638982b84b5 172 SUPERFAMILY SSF54637 3 169 6.71E-55 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS01920 81362cbc2d0af2224d566638982b84b5 172 Gene3D G3DSA:3.10.129.10 1 172 3.0E-49 T 29-03-2018 CKQ55_RS01920 81362cbc2d0af2224d566638982b84b5 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.427 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS16825 63c9558cd205fb158b6ee328ac30fcc7 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 86 1.3E-25 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CKQ55_RS16825 63c9558cd205fb158b6ee328ac30fcc7 104 SUPERFAMILY SSF54909 1 98 8.05E-30 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS16825 63c9558cd205fb158b6ee328ac30fcc7 104 Gene3D G3DSA:3.30.70.100 1 102 1.5E-21 T 29-03-2018 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 SUPERFAMILY SSF55347 131 240 2.62E-37 T 29-03-2018 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 SUPERFAMILY SSF51735 4 130 1.3E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 SUPERFAMILY SSF51735 240 271 1.3E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 Gene3D G3DSA:3.30.360.10 130 238 6.9E-35 T 29-03-2018 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 5.8E-42 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.14 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 3.1E-43 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 1.2E-109 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 Gene3D G3DSA:3.40.50.720 1 126 1.6E-27 T 29-03-2018 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 PIRSF PIRSF000161 4 272 1.2E-91 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS08430 d8cf86f515bb88e1ff7fd47de774a3d4 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.336 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:3.90.1100.10 430 645 2.1E-80 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.2E-14 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 2.6E-7 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 4.6E-16 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-27 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 SUPERFAMILY SSF64484 343 939 0.0 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 SUPERFAMILY SSF64484 12 226 0.0 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:2.40.50.100 715 795 4.0E-27 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:3.90.1800.10 1267 1313 7.2E-12 T 29-03-2018 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:2.40.270.10 1020 1242 6.8E-81 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:3.90.1110.10 148 429 1.6E-67 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Gene3D G3DSA:2.40.50.150 814 949 8.3E-29 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11550 442d679fc3a1190fc985a04065f69c9d 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 7.0E-160 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS31625 2bf82efaec50e5b94b5d7bbf29702ed1 309 Pfam PF03524 Conjugal transfer protein 33 286 1.2E-49 T 29-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CKQ55_RS04625 2766529bb020ee04ffce50c4ea956458 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04625 2766529bb020ee04ffce50c4ea956458 253 Pfam PF00005 ABC transporter 22 178 4.8E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04625 2766529bb020ee04ffce50c4ea956458 253 SMART SM00382 31 226 8.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04625 2766529bb020ee04ffce50c4ea956458 253 PIRSF PIRSF039085 3 253 7.8E-113 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS04625 2766529bb020ee04ffce50c4ea956458 253 Gene3D G3DSA:3.40.50.300 3 253 9.8E-73 T 29-03-2018 CKQ55_RS04625 2766529bb020ee04ffce50c4ea956458 253 SUPERFAMILY SSF52540 7 248 4.28E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08605 5b975e7e3721768e2a37ff714e129e66 315 SUPERFAMILY SSF53850 131 304 3.26E-10 T 29-03-2018 CKQ55_RS08605 5b975e7e3721768e2a37ff714e129e66 315 SUPERFAMILY SSF46785 9 86 5.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08605 5b975e7e3721768e2a37ff714e129e66 315 Gene3D G3DSA:1.10.10.10 5 88 1.9E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08605 5b975e7e3721768e2a37ff714e129e66 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 2.0E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 1.3E-178 T 29-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 SUPERFAMILY SSF53822 30 409 1.2E-94 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 Gene3D G3DSA:3.40.50.2300 24 154 4.1E-25 T 29-03-2018 CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 Pfam PF13433 Periplasmic binding protein domain 31 406 7.2E-173 T 29-03-2018 CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 4.0E-6 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 4.0E-6 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 4.0E-6 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS26380 e2c17a0031dbafb0e5ca9e2b27542fb8 423 Gene3D G3DSA:3.40.50.2300 155 345 1.5E-29 T 29-03-2018 CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Gene3D G3DSA:3.30.70.20 19 70 1.5E-10 T 29-03-2018 CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Gene3D G3DSA:3.30.70.20 1 18 0.016 T 29-03-2018 CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Pfam PF12798 4Fe-4S binding domain 131 151 0.095 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Pfam PF12800 4Fe-4S binding domain 10 22 0.45 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Gene3D G3DSA:3.30.70.20 128 173 3.7E-8 T 29-03-2018 CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 SUPERFAMILY SSF54862 1 170 8.97E-43 T 29-03-2018 CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Gene3D G3DSA:3.30.70.20 71 127 5.3E-17 T 29-03-2018 CKQ55_RS19145 85ad335087f4acb9a9bb74be3e02154e 175 Pfam PF13247 4Fe-4S dicluster domain 55 104 5.6E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 Gene3D G3DSA:1.20.120.140 194 288 9.4E-23 T 29-03-2018 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 230 502 65.96 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 475 488 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 SMART SM00382 300 491 1.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 Pfam PF02881 SRP54-type protein, helical bundle domain 218 283 5.7E-13 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 SUPERFAMILY SSF47364 202 281 2.62E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 Gene3D G3DSA:3.40.50.300 294 503 4.3E-41 T 29-03-2018 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 SMART SM00962 301 502 4.4E-124 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 SUPERFAMILY SSF52540 294 501 4.68E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 Pfam PF00448 SRP54-type protein, GTPase domain 301 501 4.8E-79 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 SMART SM00963 207 287 3.8E-24 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS14750 6e3adc5f2c4e02960ed6c1249870fb5a 505 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 230 501 5.8E-116 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 Gene3D G3DSA:3.40.50.1390 1 114 6.3E-33 T 29-03-2018 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 Pfam PF00239 Resolvase, N terminal domain 4 144 8.5E-40 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 SMART SM00857 4 145 8.5E-52 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 Gene3D G3DSA:1.20.5.40 115 143 1.8E-16 T 29-03-2018 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 Gene3D G3DSA:1.10.10.60 145 189 1.5E-7 T 29-03-2018 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 SUPERFAMILY SSF53041 3 144 2.09E-39 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 Pfam PF02796 Helix-turn-helix domain of resolvase 147 189 2.4E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30290 9f9672e239d222c637900e9f8cc454f4 198 SUPERFAMILY SSF46689 147 187 3.14E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS31060 c7002f4e96ae212e937c0f6174e81dd4 130 Gene3D G3DSA:1.10.10.450 3 56 1.8E-26 T 29-03-2018 CKQ55_RS31060 c7002f4e96ae212e937c0f6174e81dd4 130 SUPERFAMILY SSF140581 61 126 6.67E-21 T 29-03-2018 CKQ55_RS31060 c7002f4e96ae212e937c0f6174e81dd4 130 SUPERFAMILY SSF47729 2 56 1.88E-21 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS31060 c7002f4e96ae212e937c0f6174e81dd4 130 Pfam PF05261 TraM protein, DNA-binding 1 126 1.6E-54 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CKQ55_RS31060 c7002f4e96ae212e937c0f6174e81dd4 130 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 6.0E-41 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CKQ55_RS28450 a431c334ab6d51f738a7c3fb6cb36073 206 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 196 1.1E-45 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS28450 a431c334ab6d51f738a7c3fb6cb36073 206 SMART SM00855 2 158 3.4E-12 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS28450 a431c334ab6d51f738a7c3fb6cb36073 206 SUPERFAMILY SSF53254 1 201 2.78E-45 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS28450 a431c334ab6d51f738a7c3fb6cb36073 206 Gene3D G3DSA:3.40.50.1240 1 206 2.1E-45 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS28450 a431c334ab6d51f738a7c3fb6cb36073 206 PIRSF PIRSF000709 1 179 2.1E-6 T 29-03-2018 CKQ55_RS20505 8703084747ed4b7a4396a7e88bc814d9 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 3.0E-113 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS20505 8703084747ed4b7a4396a7e88bc814d9 395 Gene3D G3DSA:3.40.50.1970 27 201 1.1E-41 T 29-03-2018 CKQ55_RS20505 8703084747ed4b7a4396a7e88bc814d9 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS20505 8703084747ed4b7a4396a7e88bc814d9 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS20505 8703084747ed4b7a4396a7e88bc814d9 395 Gene3D G3DSA:1.20.1090.10 202 395 5.7E-59 T 29-03-2018 CKQ55_RS20505 8703084747ed4b7a4396a7e88bc814d9 395 SUPERFAMILY SSF56796 22 393 4.19E-115 T 29-03-2018 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 SUPERFAMILY SSF50249 3 123 9.42E-52 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.1E-70 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 PIRSF PIRSF002133 1 124 5.9E-54 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 Gene3D G3DSA:2.40.50.140 1 124 4.9E-64 T 29-03-2018 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.1E-43 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15265 aba59d240f69efb5e29c3f3ffc6844e4 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.747 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS26650 7075fe6350cca3dc6d0ae7ed0ffe11f8 223 SUPERFAMILY SSF161098 11 205 9.55E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS26650 7075fe6350cca3dc6d0ae7ed0ffe11f8 223 Gene3D G3DSA:1.10.3720.10 6 222 5.6E-34 T 29-03-2018 CKQ55_RS26650 7075fe6350cca3dc6d0ae7ed0ffe11f8 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 218 5.7E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 29-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 Gene3D G3DSA:1.10.1200.70 344 418 7.8E-24 T 29-03-2018 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 31.162 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 3.2E-47 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 6.3E-50 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 PIRSF PIRSF000445 1 418 7.0E-156 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 3.9E-166 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 SUPERFAMILY SSF69742 1 158 1.96E-45 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 SUPERFAMILY SSF69075 317 417 1.57E-28 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 5.4E-25 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 Gene3D G3DSA:3.40.50.720 180 343 6.6E-25 T 29-03-2018 CKQ55_RS24420 0a8761760f5c70a0b782b9ab86f9a120 418 SUPERFAMILY SSF51735 162 315 2.38E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS12295 2b8eeb6bcc7b0722e3e6d4df1d34a03f 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 8.9E-87 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CKQ55_RS12295 2b8eeb6bcc7b0722e3e6d4df1d34a03f 176 Pfam PF00227 Proteasome subunit 2 167 3.9E-23 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CKQ55_RS12295 2b8eeb6bcc7b0722e3e6d4df1d34a03f 176 PIRSF PIRSF039093 1 175 1.4E-87 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CKQ55_RS12295 2b8eeb6bcc7b0722e3e6d4df1d34a03f 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.82 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CKQ55_RS12295 2b8eeb6bcc7b0722e3e6d4df1d34a03f 176 SUPERFAMILY SSF56235 2 172 4.48E-59 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS12295 2b8eeb6bcc7b0722e3e6d4df1d34a03f 176 Gene3D G3DSA:3.60.20.10 2 172 2.2E-31 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 Gene3D G3DSA:3.40.50.720 1 150 3.1E-52 T 29-03-2018 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 SUPERFAMILY SSF55347 126 274 3.6E-62 T 29-03-2018 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.0E-48 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 389 1.2E-182 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 5.3E-36 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 386 3.0E-40 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 SUPERFAMILY SSF51735 2 150 8.27E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 SUPERFAMILY SSF69055 302 393 1.1E-29 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 PIRSF PIRSF006205 1 398 2.6E-156 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.685 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CKQ55_RS07595 5c372a28a731576d50140581e78277ea 399 Gene3D G3DSA:1.10.1740.10 312 396 5.6E-28 T 29-03-2018 CKQ55_RS00635 cea85617c1e3856e55913fe6a048d86a 303 Gene3D G3DSA:3.30.420.40 1 112 8.7E-26 T 29-03-2018 CKQ55_RS00635 cea85617c1e3856e55913fe6a048d86a 303 Pfam PF00480 ROK family 2 300 2.1E-66 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS00635 cea85617c1e3856e55913fe6a048d86a 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 62.828 T 29-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 CKQ55_RS00635 cea85617c1e3856e55913fe6a048d86a 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS00635 cea85617c1e3856e55913fe6a048d86a 303 SUPERFAMILY SSF53067 1 301 1.81E-58 T 29-03-2018 CKQ55_RS00635 cea85617c1e3856e55913fe6a048d86a 303 Gene3D G3DSA:3.30.420.40 113 303 2.2E-47 T 29-03-2018 CKQ55_RS17575 e5be223c6e2396c2d3d01a7f6f31a714 354 Gene3D G3DSA:3.40.50.1820 16 354 4.0E-52 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS17575 e5be223c6e2396c2d3d01a7f6f31a714 354 SUPERFAMILY SSF53474 183 350 2.2E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS17575 e5be223c6e2396c2d3d01a7f6f31a714 354 SUPERFAMILY SSF53474 59 150 2.2E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS17575 e5be223c6e2396c2d3d01a7f6f31a714 354 Pfam PF12697 Alpha/beta hydrolase family 81 298 5.6E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 Gene3D G3DSA:2.60.120.280 10 184 1.5E-10 T 29-03-2018 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 Gene3D G3DSA:1.10.10.60 185 221 7.0E-11 T 29-03-2018 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 Pfam PF02311 AraC-like ligand binding domain 24 135 3.4E-20 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 SUPERFAMILY SSF51215 32 122 3.27E-15 T 29-03-2018 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 Pfam PF12833 Helix-turn-helix domain 192 269 1.0E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 SUPERFAMILY SSF46689 222 271 1.61E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 Gene3D G3DSA:1.10.10.60 222 272 5.2E-12 T 29-03-2018 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 SUPERFAMILY SSF46689 170 219 3.14E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10345 4d7b0be59185331e7c8982b980f30f96 274 SMART SM00342 186 268 9.0E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS02895 9d981306b2e078cb19e8e98a68652351 85 SUPERFAMILY SSF46785 15 69 6.54E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02895 9d981306b2e078cb19e8e98a68652351 85 Pfam PF04703 FaeA-like protein 17 71 4.3E-5 T 29-03-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 CKQ55_RS02895 9d981306b2e078cb19e8e98a68652351 85 Gene3D G3DSA:1.10.10.10 3 75 5.3E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02965 3bb0fb36fda0f911354970789aaa7042 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 124 4.0E-33 T 29-03-2018 IPR020359 Biofilm regulator BssR CKQ55_RS02965 3bb0fb36fda0f911354970789aaa7042 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 126 3.0E-63 T 29-03-2018 IPR020359 Biofilm regulator BssR CKQ55_RS31215 7b243b867d954bb0326fac39272f0295 239 SUPERFAMILY SSF48657 74 214 1.7E-35 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS31215 7b243b867d954bb0326fac39272f0295 239 Pfam PF04352 ProQ/FINO family 111 213 8.1E-16 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS31215 7b243b867d954bb0326fac39272f0295 239 SMART SM00945 105 219 8.4E-11 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS31215 7b243b867d954bb0326fac39272f0295 239 Gene3D G3DSA:1.10.1710.10 47 221 1.5E-24 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS31215 7b243b867d954bb0326fac39272f0295 239 Pfam PF12602 Fertility inhibition protein N terminal 1 75 4.6E-9 T 29-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal CKQ55_RS23865 f270f7d57ce105a955ece6a4d7af0012 165 SUPERFAMILY SSF55781 2 148 4.8E-40 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS23865 f270f7d57ce105a955ece6a4d7af0012 165 Gene3D G3DSA:3.30.450.40 3 155 1.2E-24 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS23865 f270f7d57ce105a955ece6a4d7af0012 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 29-03-2018 IPR000614 Free Met sulfoxide reductase conserved site CKQ55_RS23865 f270f7d57ce105a955ece6a4d7af0012 165 Pfam PF13185 GAF domain 35 147 1.3E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS23865 f270f7d57ce105a955ece6a4d7af0012 165 SMART SM00065 9 161 9.7E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SUPERFAMILY SSF52540 380 617 5.45E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SUPERFAMILY SSF46689 594 685 4.93E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SMART SM00382 401 545 1.7E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SMART SM00065 202 354 7.3E-23 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SMART SM00065 26 174 1.2E-10 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Pfam PF00158 Sigma-54 interaction domain 381 548 2.0E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SUPERFAMILY SSF55781 26 169 3.27E-12 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Pfam PF02954 Bacterial regulatory protein, Fis family 643 682 7.4E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Gene3D G3DSA:3.40.50.300 387 553 6.6E-31 T 29-03-2018 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Gene3D G3DSA:3.30.450.40 10 171 2.0E-15 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Gene3D G3DSA:1.10.8.60 554 612 1.4E-21 T 29-03-2018 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Gene3D G3DSA:1.10.10.60 613 686 1.0E-9 T 29-03-2018 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Gene3D G3DSA:3.30.450.40 176 386 4.1E-25 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 SUPERFAMILY SSF55781 184 360 1.22E-22 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS19055 4588c5ff08aa567f49c8325868e8126e 690 Pfam PF01590 GAF domain 202 344 4.5E-12 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 SUPERFAMILY SSF54862 3 194 5.86E-68 T 29-03-2018 CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 Gene3D G3DSA:3.30.70.20 3 80 1.3E-18 T 29-03-2018 CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0034 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 Gene3D G3DSA:3.30.70.20 120 201 2.7E-18 T 29-03-2018 CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 Gene3D G3DSA:3.30.70.20 81 119 1.4E-19 T 29-03-2018 CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.6E-28 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS26180 a99128afd7b71aaf10f8b5b26c17170b 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 1.6E-78 T 29-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 SMART SM00342 208 291 3.6E-35 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 1.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 1.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 Gene3D G3DSA:2.60.120.10 23 245 2.5E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 Gene3D G3DSA:1.10.10.60 246 300 4.6E-14 T 29-03-2018 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 SUPERFAMILY SSF46689 191 241 1.12E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 Pfam PF12833 Helix-turn-helix domain 214 293 2.2E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 SUPERFAMILY SSF46689 245 294 3.23E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS18295 3a638d0ec23b0cb7e904a71fd8b63dca 303 Pfam PF10114 Sensory domain found in PocR 7 164 2.7E-43 T 29-03-2018 IPR018771 PocR domain CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Gene3D G3DSA:3.40.50.300 2 74 5.7E-11 T 29-03-2018 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Gene3D G3DSA:2.40.30.10 206 299 9.6E-33 T 29-03-2018 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-33 T 29-03-2018 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 SUPERFAMILY SSF52540 6 219 1.73E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 8.3E-34 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Gene3D G3DSA:3.40.50.300 75 203 1.0E-30 T 29-03-2018 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.2E-17 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.5E-239 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.134 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.9E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS11595 2ea5345b2814ce4792fbc1879bce045b 394 SUPERFAMILY SSF50447 205 301 2.16E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS07545 10ad0f11dcb371689295421f5b9027e6 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 1.1E-152 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS07545 10ad0f11dcb371689295421f5b9027e6 382 Gene3D G3DSA:3.40.50.2000 185 367 9.7E-15 T 29-03-2018 CKQ55_RS07545 10ad0f11dcb371689295421f5b9027e6 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 9.0E-183 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS07545 10ad0f11dcb371689295421f5b9027e6 382 Gene3D G3DSA:3.40.50.2000 1 184 1.1E-5 T 29-03-2018 CKQ55_RS07545 10ad0f11dcb371689295421f5b9027e6 382 SUPERFAMILY SSF53756 9 359 2.3E-29 T 29-03-2018 CKQ55_RS07545 10ad0f11dcb371689295421f5b9027e6 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.374 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 502 2.6E-110 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 Gene3D G3DSA:1.20.1250.20 287 516 1.5E-18 T 29-03-2018 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 Pfam PF00854 POT family 91 463 2.5E-64 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 Gene3D G3DSA:1.20.1250.20 9 215 6.4E-25 T 29-03-2018 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 SUPERFAMILY SSF103473 318 500 4.32E-12 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS17755 8bed281e1456304650bbd39e0e9aa6bf 517 SUPERFAMILY SSF103473 12 312 2.09E-23 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 1.3E-104 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 SMART SM01340 212 331 5.0E-52 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 3.8E-13 T 29-03-2018 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 7.8E-34 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 SUPERFAMILY SSF118116 448 627 4.58E-42 T 29-03-2018 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 SUPERFAMILY SSF55874 1 201 2.88E-57 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 SUPERFAMILY SSF54211 191 331 7.97E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 Gene3D G3DSA:3.30.565.10 1 216 2.0E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 Gene3D G3DSA:3.30.230.10 217 330 5.0E-28 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 626 25.461 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 Pfam PF08676 MutL C terminal dimerisation domain 449 580 3.5E-25 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 SMART SM00853 452 595 9.4E-18 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CKQ55_RS10530 51bfa4df33558570007ff556e28ab79e 629 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 Pfam PF00005 ABC transporter 279 430 3.6E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 Pfam PF00005 ABC transporter 25 174 6.9E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 Gene3D G3DSA:3.40.50.300 6 267 9.2E-55 T 29-03-2018 CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 SUPERFAMILY SSF52540 271 489 2.47E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 Gene3D G3DSA:3.40.50.300 268 491 3.1E-38 T 29-03-2018 CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 SUPERFAMILY SSF52540 9 232 1.28E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 SMART SM00382 285 479 0.67 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10260 b10238c77732bcc4cc0a11cc3907285f 500 SMART SM00382 34 222 2.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 1.0E-20 T 29-03-2018 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 1.0E-20 T 29-03-2018 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 1.0E-20 T 29-03-2018 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 1.0E-20 T 29-03-2018 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Gene3D G3DSA:1.10.274.10 146 256 2.0E-17 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 364 653 3.2E-108 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Gene3D G3DSA:3.30.1340.10 3 90 8.9E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 677 4.6E-143 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 SUPERFAMILY SSF55804 688 829 7.33E-31 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 SUPERFAMILY SSF55594 5 89 2.22E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 828 1.6E-31 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Gene3D G3DSA:3.50.30.10 257 389 2.2E-19 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Gene3D G3DSA:3.40.930.10 684 831 4.0E-33 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Gene3D G3DSA:3.20.20.60 390 423 2.9E-8 T 29-03-2018 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 SUPERFAMILY SSF47831 148 254 5.62E-18 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 SUPERFAMILY SSF51621 367 661 1.1E-95 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 SUPERFAMILY SSF52009 236 354 1.11E-24 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 4.7E-14 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Gene3D G3DSA:3.20.20.60 424 655 3.4E-67 T 29-03-2018 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 121 237 2.2E-11 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS01200 02a4b13985a038cbdc78376b197512ce 833 Pfam PF00381 PTS HPr component phosphorylation site 6 85 7.8E-14 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS01255 753d4275b90d8f3fb54e6bf91d007d5c 104 Gene3D G3DSA:1.20.59.10 2 99 1.1E-25 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS01255 753d4275b90d8f3fb54e6bf91d007d5c 104 SUPERFAMILY SSF48600 4 88 7.48E-24 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS01255 753d4275b90d8f3fb54e6bf91d007d5c 104 SMART SM00830 10 89 4.0E-28 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS01255 753d4275b90d8f3fb54e6bf91d007d5c 104 Pfam PF01817 Chorismate mutase type II 10 86 1.5E-20 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 Pfam PF09339 IclR helix-turn-helix domain 9 56 1.3E-7 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 Gene3D G3DSA:1.10.10.10 2 76 2.1E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 SUPERFAMILY SSF46785 7 79 3.7E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 SUPERFAMILY SSF55781 77 251 3.47E-48 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 SMART SM00346 7 95 4.9E-32 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 Gene3D G3DSA:3.30.450.40 77 254 1.2E-48 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS21310 be02f7cc510571a2a5a3353d86a6ca16 260 Pfam PF01614 Bacterial transcriptional regulator 122 247 1.5E-39 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS08475 0169a6d98eaf99c3c1c1898257b24793 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 429 1.1E-157 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS08475 0169a6d98eaf99c3c1c1898257b24793 433 PIRSF PIRSF015658 1 431 2.3E-177 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS08475 0169a6d98eaf99c3c1c1898257b24793 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 425 3.8E-195 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS15770 0169a6d98eaf99c3c1c1898257b24793 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 429 1.1E-157 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS15770 0169a6d98eaf99c3c1c1898257b24793 433 PIRSF PIRSF015658 1 431 2.3E-177 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS15770 0169a6d98eaf99c3c1c1898257b24793 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 425 3.8E-195 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 SUPERFAMILY SSF53850 121 546 2.9E-63 T 29-03-2018 CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 Gene3D G3DSA:3.40.190.10 257 371 4.4E-8 T 29-03-2018 CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 SUPERFAMILY SSF46785 22 96 3.84E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 1.1E-39 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 1.8E-17 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 Gene3D G3DSA:3.90.76.10 129 256 1.3E-20 T 29-03-2018 CKQ55_RS08275 e9f96e90ba036300818c065d65e7b873 551 Gene3D G3DSA:1.10.10.10 7 107 4.1E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 PIRSF PIRSF005917 1 287 2.2E-107 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 Gene3D G3DSA:3.40.1010.10 11 121 9.4E-45 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 3.1E-114 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 SUPERFAMILY SSF53790 12 232 1.96E-83 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.464 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 Gene3D G3DSA:3.30.950.10 122 237 3.8E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS16205 efaaf214febd3b04f662bff3322d4736 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 6.0E-30 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-35 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 PIRSF PIRSF002144 1 92 3.5E-31 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 Gene3D G3DSA:3.30.860.10 1 92 6.8E-40 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15335 707f49a5e41dfbeb219aeb4bac8402d7 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 SMART SM00342 172 255 1.0E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 Gene3D G3DSA:1.10.10.60 213 260 1.8E-6 T 29-03-2018 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 SUPERFAMILY SSF46689 213 257 3.67E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 Gene3D G3DSA:1.10.10.60 109 212 3.3E-8 T 29-03-2018 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 Pfam PF02311 AraC-like ligand binding domain 28 97 5.2E-5 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 SUPERFAMILY SSF51182 19 182 2.81E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 Gene3D G3DSA:2.60.120.10 7 98 3.2E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29945 4460af4a3593eae9fd2edf7246e67abd 263 Pfam PF12833 Helix-turn-helix domain 179 256 1.8E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS18845 0c3359cc04b0f8d78ae4a62356ad09a7 222 Pfam PF01323 DSBA-like thioredoxin domain 119 212 1.3E-7 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CKQ55_RS18845 0c3359cc04b0f8d78ae4a62356ad09a7 222 Gene3D G3DSA:3.40.30.10 40 220 3.1E-21 T 29-03-2018 CKQ55_RS18845 0c3359cc04b0f8d78ae4a62356ad09a7 222 SUPERFAMILY SSF52833 52 217 8.2E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 1.4E-10 T 29-03-2018 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.4E-10 T 29-03-2018 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 205 223 1.4E-10 T 29-03-2018 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 1.4E-10 T 29-03-2018 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 Gene3D G3DSA:1.20.1250.20 15 204 1.4E-36 T 29-03-2018 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 Gene3D G3DSA:1.20.1250.20 255 496 3.3E-36 T 29-03-2018 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 SUPERFAMILY SSF103473 463 489 5.89E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 SUPERFAMILY SSF103473 11 199 5.89E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 SUPERFAMILY SSF103473 251 423 5.89E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 434 3.1E-81 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CKQ55_RS13405 ea79ed81d67b0b6f17482b916d85f5f3 498 Pfam PF07690 Major Facilitator Superfamily 21 413 3.1E-55 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 6.0E-32 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Gene3D G3DSA:1.10.8.60 167 242 3.4E-20 T 29-03-2018 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 492 632 2.2E-58 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 SUPERFAMILY SSF48019 243 366 1.11E-35 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 1.8E-132 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 409 490 1.4E-19 T 29-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 SUPERFAMILY SSF52540 35 221 7.77E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 SMART SM00382 37 178 1.4E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Gene3D G3DSA:3.40.50.300 1 166 1.4E-39 T 29-03-2018 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Gene3D G3DSA:1.20.272.10 243 363 3.8E-13 T 29-03-2018 CKQ55_RS05915 9c732500e80cd0a7dc954088bb4b4db4 635 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.6E-42 T 29-03-2018 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 9.9E-126 T 29-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.396 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 SUPERFAMILY SSF51726 5 389 1.2E-114 T 29-03-2018 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 SUPERFAMILY SSF51726 391 752 1.2E-119 T 29-03-2018 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 Gene3D G3DSA:3.20.20.210 386 753 3.6E-128 T 29-03-2018 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 3.7E-161 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 PIRSF PIRSF000382 2 753 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 Gene3D G3DSA:3.20.20.210 3 385 2.0E-140 T 29-03-2018 CKQ55_RS11775 dda8d087b57fc662d3a77d93f1f564b2 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 Gene3D G3DSA:1.10.1040.10 282 488 1.7E-68 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 3.7E-50 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 2.9E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 2.9E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 2.9E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 2.9E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 1.4E-99 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 SUPERFAMILY SSF48179 283 486 3.3E-67 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 Gene3D G3DSA:3.40.50.720 1 281 5.0E-113 T 29-03-2018 CKQ55_RS21675 705f6e0061a3d9b4ff9eedbf74e1e9f5 488 SUPERFAMILY SSF51735 4 282 2.32E-101 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 29-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.015 T 29-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 Pfam PF01070 FMN-dependent dehydrogenase 13 375 4.9E-123 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 SUPERFAMILY SSF51395 223 375 9.77E-98 T 29-03-2018 CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 SUPERFAMILY SSF51395 6 193 9.77E-98 T 29-03-2018 CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 PIRSF PIRSF000138 2 380 8.2E-120 T 29-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 CKQ55_RS13855 c5927a46085400de591bde9452755f0f 411 Gene3D G3DSA:3.20.20.70 2 380 3.5E-95 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS17380 21122302202d46466333bde86271f665 477 Gene3D G3DSA:3.20.20.80 3 477 1.3E-151 T 29-03-2018 CKQ55_RS17380 21122302202d46466333bde86271f665 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS17380 21122302202d46466333bde86271f665 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS17380 21122302202d46466333bde86271f665 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS17380 21122302202d46466333bde86271f665 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS17380 21122302202d46466333bde86271f665 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS17380 21122302202d46466333bde86271f665 477 SUPERFAMILY SSF51445 3 470 1.35E-163 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS17380 21122302202d46466333bde86271f665 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 1.4E-131 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS17380 21122302202d46466333bde86271f665 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CKQ55_RS17380 21122302202d46466333bde86271f665 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 SUPERFAMILY SSF161098 17 215 2.88E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 SUPERFAMILY SSF52540 258 491 2.66E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 218 7.8E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 Gene3D G3DSA:3.40.50.300 253 502 1.9E-70 T 29-03-2018 CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 115 3.1E-20 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 SMART SM00382 282 478 8.2E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 Gene3D G3DSA:1.10.3720.10 1 226 5.2E-43 T 29-03-2018 CKQ55_RS28555 1bbdae3a1b8b6670fe6d262ef1764440 506 Pfam PF00005 ABC transporter 275 430 1.2E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 Gene3D G3DSA:3.40.710.10 24 287 6.2E-48 T 29-03-2018 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 SMART SM00936 284 375 3.7E-28 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 SUPERFAMILY SSF56601 11 284 1.83E-75 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.2E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.2E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.2E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 375 9.2E-21 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 Gene3D G3DSA:2.60.410.10 288 375 1.3E-17 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 SUPERFAMILY SSF69189 284 377 1.29E-22 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS22900 515c4b20382997b62630424d39869c95 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 264 2.6E-96 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 9.0E-61 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 SUPERFAMILY SSF46557 3 78 3.01E-29 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.173 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 SUPERFAMILY SSF54534 81 157 1.01E-24 T 29-03-2018 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 PIRSF PIRSF006092 1 158 2.0E-55 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 Gene3D G3DSA:1.10.287.180 3 75 4.9E-33 T 29-03-2018 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 Gene3D G3DSA:3.10.50.30 76 158 2.9E-28 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.3E-29 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CKQ55_RS16020 c7cf411604412ac583504da6a01b0c66 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.0E-32 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 1.6E-257 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 SUPERFAMILY SSF53901 15 295 5.37E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 Gene3D G3DSA:3.40.47.10 301 433 2.8E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 8.6E-60 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 71.465 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 Gene3D G3DSA:3.40.47.10 7 300 5.0E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 3.4E-36 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 PIRSF PIRSF000429 9 436 1.0E-123 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 3.4E-131 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS20845 d5b33dedc1ea7dd4340f61e49e6d6b92 436 SUPERFAMILY SSF53901 297 434 4.75E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 PIRSF PIRSF009451 1 506 9.6E-266 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 504 1.9E-248 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 SUPERFAMILY SSF100950 238 504 5.71E-62 T 29-03-2018 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 Gene3D G3DSA:3.40.1080.10 237 480 5.2E-38 T 29-03-2018 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 SUPERFAMILY SSF100950 7 234 2.03E-79 T 29-03-2018 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 505 5.3E-245 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CKQ55_RS08440 00f26d1b4818e54b1ad5534815814d9b 508 Gene3D G3DSA:3.40.1080.10 1 235 3.7E-57 T 29-03-2018 CKQ55_RS23655 aecd23ca6989a41d0bdfb74d852ab5c4 188 Gene3D G3DSA:3.40.50.850 3 188 1.6E-47 T 29-03-2018 CKQ55_RS23655 aecd23ca6989a41d0bdfb74d852ab5c4 188 Pfam PF00857 Isochorismatase family 9 183 1.8E-41 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS23655 aecd23ca6989a41d0bdfb74d852ab5c4 188 SUPERFAMILY SSF52499 4 188 4.19E-51 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS14645 244d419b7289b4e619f8d5c20cdf46e6 140 SUPERFAMILY SSF54637 7 131 1.46E-33 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS14645 244d419b7289b4e619f8d5c20cdf46e6 140 Gene3D G3DSA:3.10.129.10 2 134 7.5E-28 T 29-03-2018 CKQ55_RS14645 244d419b7289b4e619f8d5c20cdf46e6 140 Pfam PF13279 Thioesterase-like superfamily 17 121 3.8E-13 T 29-03-2018 CKQ55_RS14645 244d419b7289b4e619f8d5c20cdf46e6 140 PIRSF PIRSF003230 3 136 1.2E-21 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 Gene3D G3DSA:3.90.650.10 145 322 7.5E-47 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 SUPERFAMILY SSF56042 143 302 3.44E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 1.2E-20 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 PIRSF PIRSF005303 1 322 4.0E-85 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 299 4.7E-10 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 SUPERFAMILY SSF55326 4 138 2.39E-33 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.424 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 6.1E-115 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CKQ55_RS06365 48ba16b3e685b51ce38941482f58f94b 324 Gene3D G3DSA:3.30.1330.10 1 142 1.0E-33 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 Gene3D G3DSA:1.20.91.10 232 310 5.9E-12 T 29-03-2018 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 2.3E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 2.3E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 2.3E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 2.3E-8 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 Pfam PF02254 TrkA-N domain 402 512 7.1E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 SUPERFAMILY SSF51735 401 529 2.52E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 1.5E-62 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 Gene3D G3DSA:3.40.50.720 396 561 3.3E-24 T 29-03-2018 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 608 57.028 T 29-03-2018 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 CKQ55_RS08400 a4cdaa1dc9bf1ffb7eccbef8a5a9c7d6 621 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 1.3E-91 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.5E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.5E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.5E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.5E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.5E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 3.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 Pfam PF00106 short chain dehydrogenase 7 190 1.0E-48 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 Gene3D G3DSA:3.40.50.720 5 260 7.8E-61 T 29-03-2018 CKQ55_RS28775 bdf091982d672669b7fc24ef4dcbab5d 276 SUPERFAMILY SSF51735 5 254 2.09E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13695 4696dc1dd7d08416be5173af7b9a19a0 151 SUPERFAMILY SSF51283 1 150 7.85E-55 T 29-03-2018 IPR029054 dUTPase-like CKQ55_RS13695 4696dc1dd7d08416be5173af7b9a19a0 151 Gene3D G3DSA:2.70.40.10 2 115 4.4E-40 T 29-03-2018 CKQ55_RS13695 4696dc1dd7d08416be5173af7b9a19a0 151 Gene3D G3DSA:2.70.40.10 116 150 1.1E-15 T 29-03-2018 CKQ55_RS13695 4696dc1dd7d08416be5173af7b9a19a0 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.173 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CKQ55_RS13695 4696dc1dd7d08416be5173af7b9a19a0 151 Pfam PF00692 dUTPase 16 149 5.2E-44 T 29-03-2018 IPR029054 dUTPase-like CKQ55_RS13695 4696dc1dd7d08416be5173af7b9a19a0 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.8E-50 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 Gene3D G3DSA:1.10.10.10 1 94 9.6E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 SUPERFAMILY SSF53850 98 295 1.01E-18 T 29-03-2018 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 Gene3D G3DSA:3.40.190.10 97 182 2.9E-10 T 29-03-2018 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 2.3E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 SUPERFAMILY SSF46785 9 93 6.39E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 Gene3D G3DSA:3.40.190.10 183 274 1.1E-16 T 29-03-2018 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12250 de136df627ff78a1aedd9c453c6fb05b 301 Pfam PF03466 LysR substrate binding domain 97 287 2.5E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS17705 90f5e32bc69dc149c76167c1a9eb76e9 129 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 103 1.7E-12 T 29-03-2018 CKQ55_RS17705 90f5e32bc69dc149c76167c1a9eb76e9 129 ProSitePatterns PS00934 Glyoxalase I signature 1. 10 30 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CKQ55_RS17705 90f5e32bc69dc149c76167c1a9eb76e9 129 Gene3D G3DSA:3.10.180.10 3 128 1.1E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS17705 90f5e32bc69dc149c76167c1a9eb76e9 129 SUPERFAMILY SSF54593 5 127 1.88E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 51.45 T 29-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 Gene3D G3DSA:1.10.3080.10 16 461 2.0E-108 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 PRINTS PR00762 Chloride channel signature 102 119 8.9E-29 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 PRINTS PR00762 Chloride channel signature 352 372 8.9E-29 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 PRINTS PR00762 Chloride channel signature 387 403 8.9E-29 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 PRINTS PR00762 Chloride channel signature 183 202 8.9E-29 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 PRINTS PR00762 Chloride channel signature 405 424 8.9E-29 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 Pfam PF00654 Voltage gated chloride channel 89 437 8.2E-91 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS07685 40534490b17aa77ad02855bc6e91f825 472 SUPERFAMILY SSF81340 20 453 1.31E-112 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 Gene3D G3DSA:3.40.50.720 2 238 1.6E-52 T 29-03-2018 CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 Pfam PF00106 short chain dehydrogenase 5 192 7.3E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.6E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.6E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.6E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.6E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.6E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 189 0.0066 T 29-03-2018 CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.2E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.2E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.2E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04620 530e176f4cd8ded0a8a8f9fc4f18c84e 254 SUPERFAMILY SSF51735 4 235 1.41E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS09170 a2a060c3c402e611b1e6dfbe1de34354 208 Pfam PF02195 ParB-like nuclease domain 49 144 2.2E-6 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS09170 a2a060c3c402e611b1e6dfbe1de34354 208 Gene3D G3DSA:3.90.1530.10 44 110 5.0E-6 T 29-03-2018 CKQ55_RS09170 a2a060c3c402e611b1e6dfbe1de34354 208 Gene3D G3DSA:1.10.10.60 127 186 0.0016 T 29-03-2018 CKQ55_RS09170 a2a060c3c402e611b1e6dfbe1de34354 208 SUPERFAMILY SSF110849 46 178 3.84E-17 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 SMART SM00354 1 71 2.9E-28 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 Gene3D G3DSA:3.40.50.2300 56 163 9.2E-13 T 29-03-2018 CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 Pfam PF13377 Periplasmic binding protein-like domain 159 316 2.1E-24 T 29-03-2018 CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 SUPERFAMILY SSF47413 1 59 1.03E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 Gene3D G3DSA:3.40.50.2300 164 292 3.3E-23 T 29-03-2018 CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 SUPERFAMILY SSF53822 62 317 1.47E-29 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.3E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS19005 5e742b77114c64d4315124e7ed5044a4 320 Gene3D G3DSA:1.10.260.40 3 55 1.7E-20 T 29-03-2018 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 SUPERFAMILY SSF69118 182 361 2.66E-34 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 Pfam PF02627 Carboxymuconolactone decarboxylase family 225 288 1.2E-13 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 Gene3D G3DSA:1.20.1290.10 200 363 6.6E-25 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 187 360 1.9E-39 T 29-03-2018 IPR010195 Uncharacterised peroxidase-related CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 TIGRFAM TIGR04030 perox_Avi_7169: alkylhydroperoxidase domain protein, Avi_7169 family 174 360 6.7E-87 T 29-03-2018 IPR023923 Alkylhydroperoxidase domain-containing protein, Avi7169 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 Gene3D G3DSA:1.20.1290.10 3 155 3.7E-13 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 SUPERFAMILY SSF69118 18 144 2.64E-19 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS27690 ae0a2a78c3d30573abe3ea436b38ec90 363 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 241 288 1.1E-11 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS01455 0f7607125bf7c15359c232173684930f 125 SUPERFAMILY SSF55298 3 123 1.23E-26 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS01455 0f7607125bf7c15359c232173684930f 125 Pfam PF01042 Endoribonuclease L-PSP 16 122 1.2E-20 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS01455 0f7607125bf7c15359c232173684930f 125 Gene3D G3DSA:3.30.1330.40 3 125 3.6E-23 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Pfam PF01568 Molydopterin dinucleotide binding domain 693 804 1.8E-27 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 45 5.2E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 515 532 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 SUPERFAMILY SSF53706 56 695 5.5E-177 T 29-03-2018 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Gene3D G3DSA:3.90.55.10 537 613 1.4E-20 T 29-03-2018 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 SUPERFAMILY SSF50692 683 811 1.83E-39 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 55 114 1.3E-16 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 729 756 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Gene3D G3DSA:2.40.40.20 675 812 2.2E-35 T 29-03-2018 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 811 0.0 T 29-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Gene3D G3DSA:3.40.228.10 614 674 4.2E-12 T 29-03-2018 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 SMART SM00926 54 114 7.7E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Pfam PF00384 Molybdopterin oxidoreductase 117 574 3.4E-107 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Gene3D G3DSA:3.40.228.10 204 482 2.8E-63 T 29-03-2018 CKQ55_RS02195 7cbf4b76b47dd7c78f5531122ea6f165 812 Gene3D G3DSA:2.20.25.90 47 119 1.1E-17 T 29-03-2018 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.0 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Gene3D G3DSA:3.90.190.20 312 451 1.1E-37 T 29-03-2018 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Gene3D G3DSA:3.40.1190.10 90 309 1.0E-57 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 SUPERFAMILY SSF63418 1 97 2.49E-28 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 SUPERFAMILY SSF53244 313 446 2.44E-35 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 392 6.9E-14 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Pfam PF01225 Mur ligase family, catalytic domain 27 92 4.8E-10 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Pfam PF08245 Mur ligase middle domain 106 292 3.2E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 SUPERFAMILY SSF53623 100 310 1.16E-58 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 Gene3D G3DSA:3.40.1390.10 1 89 4.8E-29 T 29-03-2018 CKQ55_RS08155 3d15c3273ca4deec33c4c6dcc7600648 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 446 2.9E-142 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS21880 603d6ba66c3efd3ae845dad1acd603bd 479 SUPERFAMILY SSF56954 6 474 1.57E-78 T 29-03-2018 CKQ55_RS21880 603d6ba66c3efd3ae845dad1acd603bd 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 473 4.1E-85 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CKQ55_RS21880 603d6ba66c3efd3ae845dad1acd603bd 479 Gene3D G3DSA:1.20.1600.10 24 479 7.8E-67 T 29-03-2018 CKQ55_RS21880 603d6ba66c3efd3ae845dad1acd603bd 479 Pfam PF02321 Outer membrane efflux protein 67 264 2.0E-18 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS21880 603d6ba66c3efd3ae845dad1acd603bd 479 Pfam PF02321 Outer membrane efflux protein 291 471 6.6E-13 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS09730 ffaf2df96c4b0ca9658cd161f9820832 314 Pfam PF00892 EamA-like transporter family 4 137 8.5E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS09730 ffaf2df96c4b0ca9658cd161f9820832 314 Pfam PF00892 EamA-like transporter family 155 298 3.9E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS09730 ffaf2df96c4b0ca9658cd161f9820832 314 SUPERFAMILY SSF103481 225 301 1.96E-5 T 29-03-2018 CKQ55_RS09730 ffaf2df96c4b0ca9658cd161f9820832 314 SUPERFAMILY SSF103481 43 139 6.93E-9 T 29-03-2018 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 477 91.871 T 29-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 PRINTS PR00163 Rubredoxin signature 427 443 9.0E-7 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 PRINTS PR00163 Rubredoxin signature 457 473 9.0E-7 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 SUPERFAMILY SSF57802 427 476 4.04E-18 T 29-03-2018 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Pfam PF00753 Metallo-beta-lactamase superfamily 34 178 1.8E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Pfam PF00301 Rubredoxin 427 473 2.7E-20 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 SMART SM00849 34 227 2.4E-29 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Gene3D G3DSA:3.40.50.360 253 395 2.3E-20 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 PIRSF PIRSF005243 1 400 2.0E-162 T 29-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 SUPERFAMILY SSF56281 8 284 5.24E-51 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Gene3D G3DSA:3.60.15.10 1 247 1.7E-40 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Gene3D G3DSA:2.20.28.10 426 478 1.6E-19 T 29-03-2018 CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 SUPERFAMILY SSF52218 251 396 2.35E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS19165 1c817d5409dbc077f07444066aa598ca 481 Pfam PF00258 Flavodoxin 256 388 6.2E-12 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 SUPERFAMILY SSF53697 7 251 1.96E-71 T 29-03-2018 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 Pfam PF13580 SIS domain 48 163 5.1E-8 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 Gene3D G3DSA:1.10.8.10 271 298 9.1E-4 T 29-03-2018 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 Gene3D G3DSA:1.10.8.10 242 270 6.1E-13 T 29-03-2018 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 Gene3D G3DSA:3.40.50.10490 12 241 4.0E-53 T 29-03-2018 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.471 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 1.5E-126 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CKQ55_RS13370 76f863cd2f0c062a1502741c1d2cd2f8 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 29-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CKQ55_RS03630 a15543414010f811bb8c7b17f14c4ef9 462 Gene3D G3DSA:3.30.420.40 1 275 6.0E-5 T 29-03-2018 CKQ55_RS03630 a15543414010f811bb8c7b17f14c4ef9 462 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 461 3.2E-234 T 29-03-2018 IPR006230 Protein MutL CKQ55_RS03630 a15543414010f811bb8c7b17f14c4ef9 462 Pfam PF13941 MutL protein 4 455 2.9E-130 T 29-03-2018 IPR006230 Protein MutL CKQ55_RS03630 a15543414010f811bb8c7b17f14c4ef9 462 PIRSF PIRSF004729 1 462 1.3E-197 T 29-03-2018 IPR006230 Protein MutL CKQ55_RS09145 b1c81ba335b96911b177a8c1971933f0 164 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 6 161 1.5E-16 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS09145 b1c81ba335b96911b177a8c1971933f0 164 Gene3D G3DSA:1.10.10.60 96 162 1.5E-6 T 29-03-2018 CKQ55_RS09145 b1c81ba335b96911b177a8c1971933f0 164 Pfam PF04754 Putative transposase, YhgA-like 2 57 3.4E-14 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 Pfam PF07702 UTRA domain 95 232 6.5E-19 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 SUPERFAMILY SSF64288 62 235 2.2E-31 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 Gene3D G3DSA:1.10.10.10 1 73 1.0E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 Gene3D G3DSA:3.40.1410.10 74 237 4.4E-25 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.2E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 SMART SM00345 15 74 7.0E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 SMART SM00866 95 232 1.8E-11 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS29200 dd9b86a03184c1da8ecbb8a80f6e12d4 238 SUPERFAMILY SSF46785 9 78 1.21E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19780 00a7a57351b4b9eaa0fa3dcc51ec4af7 356 SUPERFAMILY SSF51569 8 345 2.93E-135 T 29-03-2018 CKQ55_RS19780 00a7a57351b4b9eaa0fa3dcc51ec4af7 356 Gene3D G3DSA:3.20.20.70 9 355 2.4E-128 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS19780 00a7a57351b4b9eaa0fa3dcc51ec4af7 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 349 1.7E-172 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CKQ55_RS19780 00a7a57351b4b9eaa0fa3dcc51ec4af7 356 PIRSF PIRSF001361 1 354 2.1E-163 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CKQ55_RS19780 00a7a57351b4b9eaa0fa3dcc51ec4af7 356 Pfam PF00793 DAHP synthetase I family 39 340 6.7E-107 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 Pfam PF00563 EAL domain 492 718 4.1E-59 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 SUPERFAMILY SSF55073 329 441 1.33E-5 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 SMART SM00052 485 723 1.4E-81 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 SUPERFAMILY SSF141868 492 725 1.96E-68 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 Gene3D G3DSA:3.30.70.270 307 485 3.4E-10 T 29-03-2018 CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 Gene3D G3DSA:3.20.20.450 486 726 1.8E-72 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 SMART SM00267 313 478 3.8E-6 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS20740 8d2b94ecbb818ceb2f4c1fd35e3af8ae 726 Pfam PF05231 MASE1 14 307 9.5E-33 T 29-03-2018 IPR007895 MASE1 CKQ55_RS02675 af991c1a135ac3091fcc4afc07903a02 262 Pfam PF01909 Nucleotidyltransferase domain 30 59 3.2E-5 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CKQ55_RS02675 af991c1a135ac3091fcc4afc07903a02 262 Pfam PF13427 Domain of unknown function (DUF4111) 153 255 1.3E-31 T 29-03-2018 IPR025184 Domain of unknown function DUF4111 CKQ55_RS02675 af991c1a135ac3091fcc4afc07903a02 262 SUPERFAMILY SSF81301 8 103 1.49E-11 T 29-03-2018 CKQ55_RS02675 af991c1a135ac3091fcc4afc07903a02 262 Gene3D G3DSA:3.30.460.10 3 146 3.6E-9 T 29-03-2018 CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 Pfam PF08334 Type II secretion system (T2SS), protein G 29 135 7.9E-37 T 29-03-2018 IPR013545 Type II secretion system protein G CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 5 135 1.6E-56 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 7.1E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 7.1E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 SUPERFAMILY SSF54523 32 137 6.8E-38 T 29-03-2018 CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 Gene3D G3DSA:3.30.700.10 20 135 2.5E-31 T 29-03-2018 CKQ55_RS07765 b10a2b508d353ba7590986d08065c3cf 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.0E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 8.3E-65 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.1E-28 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 SUPERFAMILY SSF52283 1 134 2.27E-27 T 29-03-2018 CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 Gene3D G3DSA:3.40.50.720 1 113 1.1E-26 T 29-03-2018 CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 SUPERFAMILY SSF51735 100 288 1.41E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 Gene3D G3DSA:3.40.50.720 114 290 2.9E-59 T 29-03-2018 CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS14090 1c29bc72e87c9ea409f81d1ac847fab9 323 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 323 70.279 T 29-03-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 SUPERFAMILY SSF55681 407 478 1.95E-108 T 29-03-2018 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 SUPERFAMILY SSF55681 10 237 1.95E-108 T 29-03-2018 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 Gene3D G3DSA:3.40.50.800 480 572 3.4E-26 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 SUPERFAMILY SSF52954 462 571 5.89E-33 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 Gene3D G3DSA:3.30.930.10 1 479 2.6E-106 T 29-03-2018 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 SUPERFAMILY SSF55826 219 390 5.76E-32 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.6E-20 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.6E-20 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.6E-20 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.6E-20 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.4E-278 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 PIRSF PIRSF001535 1 572 3.1E-277 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.7E-49 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 8.5E-27 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 Pfam PF03129 Anticodon binding domain 475 567 4.0E-20 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS07475 33dad512c058a42692eb352fdfe391c1 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.231 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CKQ55_RS18975 b23cecd7f762788e42d1b200592b1d3a 94 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 7 78 1.3E-21 T 29-03-2018 IPR011893 Selenoprotein, Rdx type CKQ55_RS18975 b23cecd7f762788e42d1b200592b1d3a 94 Pfam PF10262 Rdx family 7 79 1.7E-31 T 29-03-2018 IPR011893 Selenoprotein, Rdx type CKQ55_RS18975 b23cecd7f762788e42d1b200592b1d3a 94 SUPERFAMILY SSF52833 5 88 4.25E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS18975 b23cecd7f762788e42d1b200592b1d3a 94 Gene3D G3DSA:3.40.30.10 1 94 4.3E-38 T 29-03-2018 CKQ55_RS16210 85c3562cd5efe087b767b29d398e6e3f 329 Gene3D G3DSA:1.10.10.10 270 329 3.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16210 85c3562cd5efe087b767b29d398e6e3f 329 Pfam PF08279 HTH domain 274 313 5.0E-8 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CKQ55_RS16210 85c3562cd5efe087b767b29d398e6e3f 329 SUPERFAMILY SSF46785 271 327 1.7E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16210 85c3562cd5efe087b767b29d398e6e3f 329 Gene3D G3DSA:1.10.3290.10 13 269 7.9E-46 T 29-03-2018 IPR003812 Fido domain CKQ55_RS16210 85c3562cd5efe087b767b29d398e6e3f 329 Pfam PF02661 Fic/DOC family 101 196 7.1E-21 T 29-03-2018 IPR003812 Fido domain CKQ55_RS16210 85c3562cd5efe087b767b29d398e6e3f 329 SUPERFAMILY SSF140931 78 252 5.89E-38 T 29-03-2018 IPR003812 Fido domain CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 2.2E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 2.2E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 2.2E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 2.2E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 2.2E-17 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 SUPERFAMILY SSF56935 22 368 4.71E-86 T 29-03-2018 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 Pfam PF00267 Gram-negative porin 27 368 3.2E-156 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.7E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 3.7E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 274 293 3.7E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.7E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 3.7E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 3.7E-74 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28655 87b73ea3a293ed18c9fb4aa6b6b85707 368 Gene3D G3DSA:2.40.160.10 10 368 6.1E-57 T 29-03-2018 CKQ55_RS10525 f5f952bcecd1a600428acb10003c7f6f 316 Gene3D G3DSA:3.40.50.300 9 203 7.4E-61 T 29-03-2018 CKQ55_RS10525 f5f952bcecd1a600428acb10003c7f6f 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 8.1E-123 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CKQ55_RS10525 f5f952bcecd1a600428acb10003c7f6f 316 SUPERFAMILY SSF52540 13 157 3.2E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10525 f5f952bcecd1a600428acb10003c7f6f 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.992 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CKQ55_RS10525 f5f952bcecd1a600428acb10003c7f6f 316 Pfam PF01715 IPP transferase 46 291 1.2E-86 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CKQ55_RS10525 f5f952bcecd1a600428acb10003c7f6f 316 Gene3D G3DSA:1.10.287.890 207 289 9.4E-25 T 29-03-2018 CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 SUPERFAMILY SSF51998 8 809 1.01E-232 T 29-03-2018 CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 1.6E-214 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 Gene3D G3DSA:3.20.70.20 9 810 1.9E-276 T 29-03-2018 CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 Pfam PF01228 Glycine radical 688 791 3.5E-30 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CKQ55_RS03025 3f4b851ef1ca958be0cb2e6ab822d9b0 810 PIRSF PIRSF000379 45 810 8.0E-193 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 1.1E-105 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 Gene3D G3DSA:1.10.8.10 14 101 1.1E-12 T 29-03-2018 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.981 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.9E-138 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 PIRSF PIRSF037167 1 307 4.5E-148 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 SUPERFAMILY SSF53335 15 293 3.16E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 Pfam PF05175 Methyltransferase small domain 133 216 2.8E-16 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CKQ55_RS20865 a9030db76461d34bed5653f3dec63faf 310 Gene3D G3DSA:3.40.50.150 102 274 8.8E-35 T 29-03-2018 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 638 5.4E-293 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 2.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 2.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 2.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 2.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 2.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Gene3D G3DSA:2.70.20.10 368 476 3.7E-22 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Gene3D G3DSA:1.10.460.10 157 367 5.1E-39 T 29-03-2018 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Gene3D G3DSA:1.10.460.10 477 650 3.1E-23 T 29-03-2018 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Pfam PF01131 DNA topoisomerase 158 593 4.2E-113 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 SMART SM00493 1 124 3.9E-29 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Gene3D G3DSA:3.40.50.140 1 156 7.0E-40 T 29-03-2018 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 SMART SM00436 128 223 9.5E-37 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 SUPERFAMILY SSF56712 1 607 6.02E-187 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 641 68.071 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 Pfam PF01751 Toprim domain 3 135 8.9E-17 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CKQ55_RS29785 20ee438720a99b42a7dc9148f90854da 651 SMART SM00437 280 558 3.5E-104 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 292 456 1.2E-17 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 SUPERFAMILY SSF53067 252 502 6.72E-47 T 29-03-2018 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 SUPERFAMILY SSF53067 3 253 9.07E-58 T 29-03-2018 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 Gene3D G3DSA:3.30.420.40 1 247 2.0E-60 T 29-03-2018 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 Gene3D G3DSA:3.30.420.40 248 514 6.3E-42 T 29-03-2018 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 PIRSF PIRSF000538 1 509 3.8E-115 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS16440 129baf57826dfbe86619e8db5906c321 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 250 3.7E-50 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Gene3D G3DSA:3.40.50.300 444 654 5.5E-43 T 29-03-2018 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 8.8E-25 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 SUPERFAMILY SSF52540 439 751 7.12E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Gene3D G3DSA:1.10.8.60 353 439 2.0E-27 T 29-03-2018 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 SUPERFAMILY SSF52540 171 428 1.26E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 SMART SM01086 655 746 2.8E-35 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Gene3D G3DSA:3.40.50.300 167 352 1.1E-28 T 29-03-2018 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 3.6E-47 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 344 7.4E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.9E-15 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Gene3D G3DSA:1.10.1780.10 1 143 5.0E-28 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 Gene3D G3DSA:1.10.8.60 655 760 2.1E-25 T 29-03-2018 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 SMART SM00382 489 656 1.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 SMART SM00382 208 353 1.6E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CKQ55_RS02260 e36c0a003312f407b5cf52bc8529ef72 760 SUPERFAMILY SSF81923 1 141 3.92E-58 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 Pfam PF07687 Peptidase dimerisation domain 175 266 1.1E-10 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 Gene3D G3DSA:3.40.630.10 1 209 2.8E-45 T 29-03-2018 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 SUPERFAMILY SSF55031 174 279 3.01E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 SUPERFAMILY SSF53187 3 187 3.21E-77 T 29-03-2018 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 SUPERFAMILY SSF53187 288 370 3.21E-77 T 29-03-2018 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 Gene3D G3DSA:3.40.630.10 210 372 1.2E-16 T 29-03-2018 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 Pfam PF01546 Peptidase family M20/M25/M40 63 367 1.9E-28 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 356 4.1E-110 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS27885 74615a613f992cf86b455ae193d7857f 373 PIRSF PIRSF005962 1 372 1.7E-113 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 1.4E-22 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-22 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 1.4E-22 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 1.4E-22 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 SUPERFAMILY SSF159127 1 86 2.88E-28 T 29-03-2018 CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 Pfam PF01455 HupF/HypC family 1 71 1.5E-26 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 29-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CKQ55_RS19070 ad8d0af8277c825846304c2bcf5cae13 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 6.5E-32 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 Gene3D G3DSA:3.30.2350.10 10 229 3.3E-79 T 29-03-2018 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 SUPERFAMILY SSF55120 11 246 2.5E-83 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 5.8E-56 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.57 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 SUPERFAMILY SSF88697 251 310 3.78E-14 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 Gene3D G3DSA:2.30.130.10 250 313 1.3E-14 T 29-03-2018 IPR002478 PUA domain GO:0003723 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 3.8E-19 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.5E-92 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS16095 4ba4ca0b4b28488ceadd61de864885cb 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 3.9E-22 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Gene3D G3DSA:3.40.50.300 289 500 5.7E-27 T 29-03-2018 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 SMART SM00382 336 481 7.4E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 SUPERFAMILY SSF46689 525 625 5.73E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Pfam PF06506 Propionate catabolism activator 26 190 1.8E-37 T 29-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Gene3D G3DSA:1.10.10.60 563 627 6.1E-15 T 29-03-2018 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Pfam PF02954 Bacterial regulatory protein, Fis family 583 623 4.5E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 SUPERFAMILY SSF52540 315 552 2.79E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 525 534 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Pfam PF00158 Sigma-54 interaction domain 316 483 5.6E-62 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 SUPERFAMILY SSF159800 5 185 3.27E-41 T 29-03-2018 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Gene3D G3DSA:1.10.8.60 501 562 3.6E-15 T 29-03-2018 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Gene3D G3DSA:3.40.50.10660 89 165 8.1E-17 T 29-03-2018 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 606 626 1.3E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 589 606 1.3E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS14485 c220e6431c43967c376ece67b35190d7 627 Gene3D G3DSA:3.40.50.2300 1 88 3.6E-14 T 29-03-2018 CKQ55_RS04385 c0a46adb01d4833b4532a37ca993f8cb 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 349 1.1E-48 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS04385 c0a46adb01d4833b4532a37ca993f8cb 362 PIRSF PIRSF000112 2 362 1.3E-121 T 29-03-2018 CKQ55_RS04385 c0a46adb01d4833b4532a37ca993f8cb 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS04385 c0a46adb01d4833b4532a37ca993f8cb 362 SUPERFAMILY SSF56796 11 358 9.81E-60 T 29-03-2018 CKQ55_RS04385 c0a46adb01d4833b4532a37ca993f8cb 362 Gene3D G3DSA:1.20.1090.10 162 362 4.6E-30 T 29-03-2018 CKQ55_RS04385 c0a46adb01d4833b4532a37ca993f8cb 362 Gene3D G3DSA:3.40.50.1970 1 159 1.5E-21 T 29-03-2018 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 Pfam PF00455 DeoR C terminal sensor domain 75 229 2.9E-40 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 Gene3D G3DSA:1.10.10.10 1 65 5.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 SUPERFAMILY SSF100950 75 233 3.98E-23 T 29-03-2018 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 SMART SM01134 71 230 2.3E-52 T 29-03-2018 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 SMART SM00420 6 58 4.4E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 8.3E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 SUPERFAMILY SSF46785 4 60 5.77E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28710 60207933c39aa64fd73fe9b0c42e2616 247 Gene3D G3DSA:3.40.50.1360 66 218 6.1E-31 T 29-03-2018 CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 SUPERFAMILY SSF52540 6 235 2.3E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 SMART SM00382 32 228 7.5E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 SMART SM00382 282 476 3.4E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 Pfam PF00005 ABC transporter 275 427 7.9E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 Pfam PF00005 ABC transporter 23 174 4.1E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 Gene3D G3DSA:3.40.50.300 2 248 5.3E-48 T 29-03-2018 CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 Gene3D G3DSA:3.40.50.300 261 495 9.6E-36 T 29-03-2018 CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 SUPERFAMILY SSF52540 243 485 5.13E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12390 a0f9a6f77ca3fcbdb86f5202f2d482a7 503 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 214 225 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 SUPERFAMILY SSF50494 27 263 5.97E-27 T 29-03-2018 IPR009003 Peptidase S1, PA clan CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 Gene3D G3DSA:2.40.10.10 198 270 3.8E-10 T 29-03-2018 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 Pfam PF13365 Trypsin-like peptidase domain 66 237 2.3E-6 T 29-03-2018 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 Gene3D G3DSA:2.40.10.10 76 197 1.5E-4 T 29-03-2018 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 Gene3D G3DSA:2.40.10.10 43 75 1.3E-5 T 29-03-2018 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 PRINTS PR00839 V8 serine protease family signature 209 225 4.5E-18 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 PRINTS PR00839 V8 serine protease family signature 66 83 4.5E-18 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 PRINTS PR00839 V8 serine protease family signature 229 241 4.5E-18 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 PRINTS PR00839 V8 serine protease family signature 175 188 4.5E-18 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CKQ55_RS26120 f6d496ea759995d5ed50ec00b3ae9ae8 270 PRINTS PR00839 V8 serine protease family signature 41 58 4.5E-18 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 204 289 7.2E-11 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 SUPERFAMILY SSF111369 138 175 4.45E-7 T 29-03-2018 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 SUPERFAMILY SSF111369 56 109 4.45E-7 T 29-03-2018 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 345 3.6E-16 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 Gene3D G3DSA:1.10.287.470 139 186 7.0E-6 T 29-03-2018 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 Gene3D G3DSA:2.40.50.100 209 356 3.7E-6 T 29-03-2018 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 Gene3D G3DSA:2.40.50.100 60 138 1.2E-12 T 29-03-2018 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 SUPERFAMILY SSF111369 194 270 3.53E-8 T 29-03-2018 CKQ55_RS19335 f58fbed97bbcdf3fd5fc7ba4f7d0152e 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 2.3E-139 T 29-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.0E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 SUPERFAMILY SSF46785 4 81 2.97E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 Gene3D G3DSA:3.40.190.10 89 177 1.4E-15 T 29-03-2018 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 Pfam PF03466 LysR substrate binding domain 89 291 3.5E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 Gene3D G3DSA:1.10.10.10 3 84 3.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 Gene3D G3DSA:3.40.190.10 178 265 3.0E-22 T 29-03-2018 CKQ55_RS14335 1d36010e7682dcd06d1c53bca1a4994d 299 SUPERFAMILY SSF53850 90 297 3.41E-46 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Gene3D G3DSA:1.20.1640.10 287 510 3.0E-45 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.9E-115 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Gene3D G3DSA:3.30.70.1430 567 668 2.1E-22 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Gene3D G3DSA:3.30.2090.10 180 275 1.9E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Gene3D G3DSA:3.30.70.1430 38 140 2.2E-30 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82866 296 497 1.57E-48 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82693 38 132 9.94E-28 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82693 135 182 3.77E-27 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82693 274 330 3.77E-27 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82714 182 271 1.7E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Gene3D G3DSA:1.20.1640.10 827 1031 1.2E-38 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82693 565 669 1.41E-33 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82714 723 809 3.4E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 SUPERFAMILY SSF82866 807 1033 9.02E-45 T 29-03-2018 CKQ55_RS15565 86f6c3fde90597b7e5eb53ccc4c54a40 1036 Gene3D G3DSA:3.30.2090.10 722 810 4.2E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS02265 af7f642591de85656e05d535d54a9911 105 Gene3D G3DSA:3.30.1390.10 12 104 9.7E-38 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CKQ55_RS02265 af7f642591de85656e05d535d54a9911 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 22 101 3.0E-34 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CKQ55_RS02265 af7f642591de85656e05d535d54a9911 105 SUPERFAMILY SSF54736 21 104 1.62E-33 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CKQ55_RS02265 af7f642591de85656e05d535d54a9911 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 100 28.523 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Gene3D G3DSA:1.10.274.10 269 386 3.8E-25 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Pfam PF05524 PEP-utilising enzyme, N-terminal 252 370 1.1E-19 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 PRINTS PR00107 Phosphocarrier protein signature 168 184 4.1E-6 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 PRINTS PR00107 Phosphocarrier protein signature 193 208 4.1E-6 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 PRINTS PR00107 Phosphocarrier protein signature 208 225 4.1E-6 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 SUPERFAMILY SSF52009 357 463 3.01E-20 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Gene3D G3DSA:3.40.50.510 1 146 3.6E-31 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Pfam PF00391 PEP-utilising enzyme, mobile domain 395 463 3.9E-15 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Gene3D G3DSA:3.30.1340.10 157 242 7.2E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Pfam PF00381 PTS HPr component phosphorylation site 160 236 8.6E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 SUPERFAMILY SSF53062 1 128 5.76E-29 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 235 3.5E-14 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 SUPERFAMILY SSF55594 159 242 5.23E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 1.2E-38 T 29-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Gene3D G3DSA:3.50.30.10 387 472 4.5E-16 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 Pfam PF03610 PTS system fructose IIA component 4 120 7.3E-25 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 168 175 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CKQ55_RS16590 4025b994b19c94cbab6f94d8e92cc11e 472 SUPERFAMILY SSF47831 277 385 4.45E-27 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 SUPERFAMILY SSF81464 29 116 2.94E-23 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 239 7.8E-122 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 Gene3D G3DSA:1.10.287.90 28 113 1.6E-19 T 29-03-2018 CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 PIRSF PIRSF000292 1 313 9.7E-133 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 1.5E-5 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 SUPERFAMILY SSF49503 120 282 2.6E-53 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 Gene3D G3DSA:2.60.40.420 114 281 8.3E-53 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS06235 22433ebde30c1d52aeb1f85105195df8 315 Pfam PF06481 COX Aromatic Rich Motif 239 285 4.6E-19 T 29-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 SUPERFAMILY SSF54862 33 153 5.02E-29 T 29-03-2018 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.3E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 Gene3D G3DSA:3.30.70.20 71 105 9.7E-15 T 29-03-2018 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 Gene3D G3DSA:3.30.70.20 15 70 3.0E-7 T 29-03-2018 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.938 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 8.4E-51 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 Gene3D G3DSA:3.30.70.20 106 171 1.8E-7 T 29-03-2018 CKQ55_RS21150 0bde1a03b9a9577992dd10e4d3a4b1b0 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS17825 8283cb4449fa11206bbe9e57d0224650 99 SUPERFAMILY SSF54909 1 98 6.08E-27 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS17825 8283cb4449fa11206bbe9e57d0224650 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.0E-14 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CKQ55_RS17825 8283cb4449fa11206bbe9e57d0224650 99 Gene3D G3DSA:3.30.70.100 1 94 2.0E-21 T 29-03-2018 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 Pfam PF03466 LysR substrate binding domain 89 295 2.1E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 SUPERFAMILY SSF46785 4 89 1.64E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 SUPERFAMILY SSF53850 90 296 1.63E-40 T 29-03-2018 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 Gene3D G3DSA:3.40.190.10 90 178 1.0E-24 T 29-03-2018 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 Gene3D G3DSA:1.10.10.10 1 85 3.8E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 Gene3D G3DSA:3.40.190.10 179 270 1.9E-25 T 29-03-2018 CKQ55_RS26150 295f511f3705de3de14c8900e4240742 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.1E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 SUPERFAMILY SSF55785 83 173 1.74E-8 T 29-03-2018 IPR000014 PAS domain CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 Gene3D G3DSA:1.10.10.60 448 508 5.9E-8 T 29-03-2018 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 SUPERFAMILY SSF52540 209 440 4.71E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 SMART SM00382 226 363 5.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 Gene3D G3DSA:1.10.8.60 372 442 5.9E-18 T 29-03-2018 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 Gene3D G3DSA:3.30.450.20 82 185 9.8E-13 T 29-03-2018 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 Gene3D G3DSA:3.30.70.260 1 81 2.0E-9 T 29-03-2018 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 8.5E-28 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 SUPERFAMILY SSF46689 454 507 1.43E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 Pfam PF00158 Sigma-54 interaction domain 210 365 7.6E-53 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 SMART SM00091 80 146 1.2E-7 T 29-03-2018 IPR000014 PAS domain CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 SUPERFAMILY SSF55021 2 76 4.66E-5 T 29-03-2018 CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS29285 4a13344fddeb6032ef61b480b80d6d86 513 Gene3D G3DSA:3.40.50.300 203 371 7.3E-23 T 29-03-2018 CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 Gene3D G3DSA:2.40.100.10 1 164 6.1E-54 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 PIRSF PIRSF001467 1 164 4.0E-29 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 SUPERFAMILY SSF50891 1 162 2.63E-60 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS05730 adda9005166ffead50e5f9b8f9e930e8 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 2.6E-49 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 1.5E-19 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Gene3D G3DSA:3.40.1190.10 108 324 9.6E-56 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Gene3D G3DSA:3.90.190.20 325 480 7.4E-35 T 29-03-2018 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.2E-29 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Pfam PF08245 Mur ligase middle domain 124 304 7.8E-30 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 SUPERFAMILY SSF53623 105 322 2.62E-74 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 SUPERFAMILY SSF53244 323 476 2.2E-44 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.166 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 Gene3D G3DSA:3.40.50.720 1 107 1.8E-18 T 29-03-2018 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 SUPERFAMILY SSF51984 20 106 2.62E-29 T 29-03-2018 CKQ55_RS08130 f3d42ea3e697e13a1cb665b0a1d47e24 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 8.4E-183 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS11065 78f126896774094220b1871af0aac21c 175 Gene3D G3DSA:2.40.50.140 1 120 2.1E-46 T 29-03-2018 CKQ55_RS11065 78f126896774094220b1871af0aac21c 175 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.972 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CKQ55_RS11065 78f126896774094220b1871af0aac21c 175 SUPERFAMILY SSF50249 4 175 1.89E-62 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS11065 78f126896774094220b1871af0aac21c 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 175 9.4E-63 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CKQ55_RS11065 78f126896774094220b1871af0aac21c 175 PIRSF PIRSF002070 2 158 1.3E-41 T 29-03-2018 CKQ55_RS11065 78f126896774094220b1871af0aac21c 175 Pfam PF00436 Single-strand binding protein family 6 112 3.3E-42 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 SUPERFAMILY SSF55031 228 335 4.64E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 Gene3D G3DSA:3.40.630.10 2 311 5.6E-60 T 29-03-2018 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 Pfam PF07687 Peptidase dimerisation domain 231 319 8.1E-11 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 Gene3D G3DSA:3.40.630.10 312 433 2.6E-12 T 29-03-2018 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 419 2.5E-124 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 PIRSF PIRSF005962 3 435 8.8E-125 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 SUPERFAMILY SSF53187 341 430 4.71E-64 T 29-03-2018 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 SUPERFAMILY SSF53187 94 242 4.71E-64 T 29-03-2018 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 SUPERFAMILY SSF53187 3 54 4.71E-64 T 29-03-2018 CKQ55_RS25950 e94a5ef70aba3e34d7ea15e1dfc92bce 436 Pfam PF01546 Peptidase family M20/M25/M40 112 428 2.9E-31 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 SMART SM01185 69 123 1.6E-25 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Gene3D G3DSA:2.40.50.140 67 129 4.8E-24 T 29-03-2018 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 3.8E-76 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Gene3D G3DSA:2.40.50.140 131 186 8.2E-28 T 29-03-2018 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.1E-23 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Gene3D G3DSA:2.30.30.30 4 63 4.1E-24 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 SUPERFAMILY SSF50249 70 128 1.33E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 SUPERFAMILY SSF50249 130 187 7.2E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.646 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 SMART SM00841 131 186 2.7E-33 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 SUPERFAMILY SSF50104 6 63 2.11E-17 T 29-03-2018 IPR008991 Translation protein SH3-like domain CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 PIRSF PIRSF005901 2 188 3.1E-66 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 1.0E-21 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CKQ55_RS10650 028bfeec70493809851b9469a09dacb4 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.8E-26 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 PIRSF PIRSF000429 1 387 1.4E-134 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 Gene3D G3DSA:3.40.47.10 1 256 1.3E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 3.5E-51 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 4.1E-147 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 Gene3D G3DSA:3.40.47.10 257 384 4.8E-34 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 SUPERFAMILY SSF53901 1 259 5.61E-80 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 2.1E-86 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 3.6E-238 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.38 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CKQ55_RS11690 7b7f2cc77547f8219c07997a2875cb33 387 SUPERFAMILY SSF53901 262 386 5.0E-44 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20415 1bbe49dff327951c9bedb7fc201cfbc9 67 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 1.9E-33 T 29-03-2018 IPR020910 Uncharacterised protein family UPF0370 CKQ55_RS20415 1bbe49dff327951c9bedb7fc201cfbc9 67 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 26.23 T 29-03-2018 IPR020910 Uncharacterised protein family UPF0370 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 1.6E-109 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 Pfam PF08245 Mur ligase middle domain 54 196 4.7E-9 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 SUPERFAMILY SSF53244 286 413 4.06E-33 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 354 1.2E-6 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 PIRSF PIRSF001563 7 418 8.2E-107 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 Gene3D G3DSA:3.90.190.20 288 421 1.6E-29 T 29-03-2018 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 Gene3D G3DSA:3.40.1190.10 2 287 1.5E-77 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS20940 59a1aadd7b245f686e0db169428ec96a 422 SUPERFAMILY SSF53623 13 284 8.24E-86 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 SUPERFAMILY SSF53335 3 207 2.18E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 7.3E-23 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 7.3E-23 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 7.3E-23 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 7.3E-23 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 7.3E-23 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 Gene3D G3DSA:3.40.50.150 2 220 1.8E-42 T 29-03-2018 CKQ55_RS30950 acf45ecc3ff99c508a214cd6e46a70e0 225 Pfam PF01555 DNA methylase 21 200 5.1E-33 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CKQ55_RS21655 ad21e2d6fbb1f12271f2aac7a64648ea 520 Gene3D G3DSA:3.20.20.450 261 515 7.4E-74 T 29-03-2018 IPR001633 EAL domain CKQ55_RS21655 ad21e2d6fbb1f12271f2aac7a64648ea 520 SUPERFAMILY SSF141868 266 509 2.09E-71 T 29-03-2018 IPR001633 EAL domain CKQ55_RS21655 ad21e2d6fbb1f12271f2aac7a64648ea 520 SMART SM00052 260 505 2.2E-91 T 29-03-2018 IPR001633 EAL domain CKQ55_RS21655 ad21e2d6fbb1f12271f2aac7a64648ea 520 Pfam PF12792 CSS motif domain associated with EAL 40 236 2.7E-36 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CKQ55_RS21655 ad21e2d6fbb1f12271f2aac7a64648ea 520 Pfam PF00563 EAL domain 267 500 2.0E-64 T 29-03-2018 IPR001633 EAL domain CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 Gene3D G3DSA:2.60.120.10 73 184 2.1E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 Pfam PF07883 Cupin domain 111 178 1.1E-16 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 SUPERFAMILY SSF47413 7 72 2.57E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 Gene3D G3DSA:1.10.260.40 3 72 8.3E-17 T 29-03-2018 CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 SUPERFAMILY SSF51182 51 183 8.91E-30 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 Pfam PF01381 Helix-turn-helix 13 66 2.9E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS01175 5add4638d87a63ecf8cf01ffe779e6e7 185 SMART SM00530 11 66 1.2E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS24815 b9678fc2ab181a0c557d944a822d8ac2 266 Gene3D G3DSA:3.40.190.10 121 266 2.6E-43 T 29-03-2018 CKQ55_RS24815 b9678fc2ab181a0c557d944a822d8ac2 266 Gene3D G3DSA:3.40.190.10 20 120 1.5E-19 T 29-03-2018 CKQ55_RS24815 b9678fc2ab181a0c557d944a822d8ac2 266 PIRSF PIRSF002854 1 266 1.5E-92 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS24815 b9678fc2ab181a0c557d944a822d8ac2 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 266 7.8E-101 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS24815 b9678fc2ab181a0c557d944a822d8ac2 266 SUPERFAMILY SSF53850 27 266 1.33E-74 T 29-03-2018 CKQ55_RS24815 b9678fc2ab181a0c557d944a822d8ac2 266 Pfam PF03180 NLPA lipoprotein 28 266 2.1E-86 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 Gene3D G3DSA:1.10.260.40 7 60 1.4E-17 T 29-03-2018 CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 Gene3D G3DSA:3.40.50.2300 177 321 7.4E-28 T 29-03-2018 CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 Gene3D G3DSA:3.40.50.2300 61 176 2.2E-22 T 29-03-2018 CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 SMART SM00354 6 76 9.6E-15 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 SUPERFAMILY SSF47413 6 64 2.0E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 SUPERFAMILY SSF53822 64 325 5.72E-46 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 Pfam PF13377 Periplasmic binding protein-like domain 174 327 1.8E-17 T 29-03-2018 CKQ55_RS04330 68d48d7d2c26d64da86e51df2df3dc20 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 2.4E-13 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 SUPERFAMILY SSF51604 103 399 6.29E-68 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 Pfam PF13378 Enolase C-terminal domain-like 206 390 3.4E-40 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 220 251 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 19 115 5.9E-21 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 SUPERFAMILY SSF54826 5 120 6.75E-28 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 Gene3D G3DSA:3.30.390.10 2 127 5.1E-30 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 90 115 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 Gene3D G3DSA:3.20.20.120 128 384 8.9E-65 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18945 f5a5697ca6b9fd8a645af5b9fa3e7127 417 SMART SM00922 133 270 1.8E-12 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS06030 d550ea93350d288f3b9c14d4a5bc46c0 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 1.8E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06030 d550ea93350d288f3b9c14d4a5bc46c0 283 Gene3D G3DSA:1.10.3720.10 4 270 3.4E-44 T 29-03-2018 CKQ55_RS06030 d550ea93350d288f3b9c14d4a5bc46c0 283 SUPERFAMILY SSF161098 9 283 5.33E-68 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19755 f4b395a555d5d003e4c00bfe07af75af 145 Pfam PF11162 Protein of unknown function (DUF2946) 17 137 2.5E-17 T 29-03-2018 IPR021333 Protein of unknown function DUF2946 CKQ55_RS28855 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS28855 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS28855 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS09000 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS09000 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS09000 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS07110 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07110 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS07110 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS03700 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS03700 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS03700 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS18270 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS18270 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS18270 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS04865 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS04865 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS04865 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS19505 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS19505 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS19505 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS16540 362ff98e85423d0b94e139f742ec9a7c 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS16540 362ff98e85423d0b94e139f742ec9a7c 402 Gene3D G3DSA:3.90.350.10 50 313 6.3E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS16540 362ff98e85423d0b94e139f742ec9a7c 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 SUPERFAMILY SSF49584 137 214 2.22E-20 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 Gene3D G3DSA:2.60.40.10 137 220 5.1E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 SUPERFAMILY SSF49354 18 134 1.13E-38 T 29-03-2018 IPR008962 PapD-like CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 135 4.4E-40 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 PRINTS PR00969 Pili chaperone signature 23 32 7.0E-23 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 PRINTS PR00969 Pili chaperone signature 152 167 7.0E-23 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 PRINTS PR00969 Pili chaperone signature 117 132 7.0E-23 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 PRINTS PR00969 Pili chaperone signature 92 109 7.0E-23 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 91 108 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 157 212 1.8E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS21190 d592b04aecde0567bdb8db2cf1e067af 220 Gene3D G3DSA:2.60.40.10 23 133 8.1E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS13145 1e9604d62da89bb638585d5238954c7b 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 8.8E-21 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CKQ55_RS13145 1e9604d62da89bb638585d5238954c7b 142 Gene3D G3DSA:2.60.40.790 6 135 2.5E-20 T 29-03-2018 IPR008978 HSP20-like chaperone CKQ55_RS13145 1e9604d62da89bb638585d5238954c7b 142 SUPERFAMILY SSF49764 30 134 4.88E-19 T 29-03-2018 IPR008978 HSP20-like chaperone CKQ55_RS13145 1e9604d62da89bb638585d5238954c7b 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 45.743 T 29-03-2018 IPR022848 Small heat shock protein IbpB CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 Gene3D G3DSA:3.40.50.2000 480 795 4.8E-144 T 29-03-2018 CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 Gene3D G3DSA:3.40.50.2000 6 479 6.3E-197 T 29-03-2018 CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 SUPERFAMILY SSF53756 9 814 0.0 T 29-03-2018 CKQ55_RS14950 b2f8ccc8bdb45debd0b1d8e54e5f7f34 815 PIRSF PIRSF000460 2 815 3.7E-237 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 Gene3D G3DSA:3.30.565.10 225 478 1.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 SMART SM00387 375 482 1.6E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 Pfam PF08918 PhoQ Sensor 10 188 4.3E-84 T 29-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 SUPERFAMILY SSF55874 337 478 2.36E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 9.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 9.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 SUPERFAMILY SSF47384 250 323 6.41E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS00540 0f18f580768363120a18afd52da14f08 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 474 2.5E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 SUPERFAMILY SSF55821 170 374 1.53E-41 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Gene3D G3DSA:3.30.70.100 1 92 8.2E-20 T 29-03-2018 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Gene3D G3DSA:3.90.870.10 189 377 1.2E-44 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 733 1.7E-274 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Pfam PF00708 Acylphosphatase 4 83 2.9E-15 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Pfam PF07503 HypF finger 103 136 3.9E-16 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Pfam PF07503 HypF finger 153 185 4.0E-16 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 SUPERFAMILY SSF54975 3 86 1.4E-19 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Gene3D G3DSA:3.30.420.40 561 711 2.7E-25 T 29-03-2018 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 Pfam PF01300 Telomere recombination 205 368 1.1E-43 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 PIRSF PIRSF006256 1 739 1.0E-264 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 SUPERFAMILY SSF53067 587 736 4.23E-5 T 29-03-2018 CKQ55_RS19150 ac375f5e6fe954dbdcbba7fda862c22c 739 SUPERFAMILY SSF53067 468 521 4.23E-5 T 29-03-2018 CKQ55_RS09225 d5afde70aa05dc04aa1182204bc13331 355 Gene3D G3DSA:1.10.287.470 114 194 1.6E-7 T 29-03-2018 CKQ55_RS09225 d5afde70aa05dc04aa1182204bc13331 355 SUPERFAMILY SSF111369 45 145 1.57E-15 T 29-03-2018 CKQ55_RS09225 d5afde70aa05dc04aa1182204bc13331 355 SUPERFAMILY SSF111369 186 247 1.57E-15 T 29-03-2018 CKQ55_RS09225 d5afde70aa05dc04aa1182204bc13331 355 Pfam PF13533 Biotin-lipoyl like 45 89 4.3E-11 T 29-03-2018 CKQ55_RS09225 d5afde70aa05dc04aa1182204bc13331 355 Gene3D G3DSA:2.40.50.100 195 295 0.032 T 29-03-2018 CKQ55_RS09225 d5afde70aa05dc04aa1182204bc13331 355 Gene3D G3DSA:2.40.50.100 45 113 1.4E-13 T 29-03-2018 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 SUPERFAMILY SSF46955 8 129 4.4E-29 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 Pfam PF00376 MerR family regulatory protein 9 46 8.9E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 Pfam PF09278 MerR, DNA binding 51 113 3.9E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 SMART SM00422 8 77 2.6E-28 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 3.6E-55 T 29-03-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 Gene3D G3DSA:1.10.1660.10 4 63 2.5E-20 T 29-03-2018 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 Gene3D G3DSA:1.10.1660.10 64 142 4.5E-20 T 29-03-2018 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 2.0E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 2.0E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02555 8cddeb3394d125256d9a19c0b17af202 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 2.0E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS13730 fa64c69e09edc552eef253d0ec8a9480 256 Gene3D G3DSA:3.90.550.10 1 216 3.4E-23 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS13730 fa64c69e09edc552eef253d0ec8a9480 256 SUPERFAMILY SSF53448 2 147 1.31E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS13730 fa64c69e09edc552eef253d0ec8a9480 256 Pfam PF00535 Glycosyl transferase family 2 6 142 6.1E-18 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 SUPERFAMILY SSF142754 29 341 5.89E-107 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.744 T 29-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 Gene3D G3DSA:3.40.50.10800 115 208 4.4E-19 T 29-03-2018 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 1.9E-102 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 24 341 3.6E-123 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 Gene3D G3DSA:3.40.50.10800 209 323 1.5E-31 T 29-03-2018 CKQ55_RS03530 b9366221be4ae02e1a1594082df87884 347 Gene3D G3DSA:3.40.50.10800 25 110 1.5E-17 T 29-03-2018 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 SUPERFAMILY SSF48498 82 192 5.59E-20 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 192 2.1E-32 T 29-03-2018 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 191 1.2E-77 T 29-03-2018 IPR017757 Transcriptional repressor BetI CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 7.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 Gene3D G3DSA:1.10.260.40 43 63 1.4E-5 T 29-03-2018 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.2E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 Gene3D G3DSA:1.10.357.10 64 197 2.4E-11 T 29-03-2018 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 SUPERFAMILY SSF46689 6 80 3.49E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 101.94 T 29-03-2018 IPR017757 Transcriptional repressor BetI CKQ55_RS04570 b39c411d7a529679227381c5734c9b22 197 Gene3D G3DSA:1.10.10.60 9 42 2.4E-13 T 29-03-2018 CKQ55_RS00605 45adcfbb0614947dd5ce157c403def27 339 Pfam PF03812 2-keto-3-deoxygluconate permease 5 308 1.6E-107 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CKQ55_RS00605 45adcfbb0614947dd5ce157c403def27 339 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 28 310 7.0E-66 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SMART SM00873 212 385 1.4E-97 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:3.30.56.10 1 53 4.5E-12 T 29-03-2018 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:2.40.50.140 54 139 8.0E-45 T 29-03-2018 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 49.186 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 2.1E-21 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SUPERFAMILY SSF54991 696 794 9.55E-31 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SUPERFAMILY SSF56037 195 394 3.14E-77 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 6.3E-299 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.5E-28 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SUPERFAMILY SSF55681 467 690 6.96E-55 T 29-03-2018 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:3.30.930.10 490 690 2.5E-37 T 29-03-2018 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.9E-28 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Pfam PF03483 B3/4 domain 212 385 2.0E-70 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SMART SM00896 701 794 9.4E-46 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:3.30.56.10 403 475 1.2E-25 T 29-03-2018 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:3.30.56.10 140 184 3.0E-8 T 29-03-2018 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SUPERFAMILY SSF50249 35 197 7.59E-52 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:3.50.40.10 195 395 1.5E-72 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 Gene3D G3DSA:3.30.70.380 698 794 2.6E-23 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SUPERFAMILY SSF46955 403 475 4.85E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS24800 064a307def7c1bc025de48879c8d1d9a 795 SMART SM00874 403 471 1.6E-31 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CKQ55_RS12350 1715dd4afe60471604d42279381bf9d9 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 46.373 T 29-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 CKQ55_RS12350 1715dd4afe60471604d42279381bf9d9 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 4.4E-110 T 29-03-2018 CKQ55_RS12350 1715dd4afe60471604d42279381bf9d9 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 343 8.4E-217 T 29-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 Pfam PF02310 B12 binding domain 586 701 1.1E-15 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 SUPERFAMILY SSF51703 4 542 2.22E-217 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 SUPERFAMILY SSF52242 556 711 1.96E-54 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 Pfam PF01642 Methylmalonyl-CoA mutase 28 539 4.2E-235 T 29-03-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 29-03-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 713 9.2E-65 T 29-03-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 Gene3D G3DSA:3.20.20.240 27 542 2.3E-241 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 Gene3D G3DSA:3.40.50.280 567 714 4.7E-35 T 29-03-2018 CKQ55_RS17295 cd4ae8181fab370953d85484694f318d 714 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 547 2.7E-279 T 29-03-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS09020 18972fb8d9a68b58b593f60c7068407d 287 SUPERFAMILY SSF46689 5 79 7.17E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS09020 18972fb8d9a68b58b593f60c7068407d 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 79 6.0E-15 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS09020 18972fb8d9a68b58b593f60c7068407d 287 Pfam PF01380 SIS domain 124 252 3.6E-19 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS09020 18972fb8d9a68b58b593f60c7068407d 287 SUPERFAMILY SSF53697 96 277 2.67E-37 T 29-03-2018 CKQ55_RS09020 18972fb8d9a68b58b593f60c7068407d 287 Gene3D G3DSA:1.10.10.10 1 81 8.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09020 18972fb8d9a68b58b593f60c7068407d 287 Gene3D G3DSA:3.40.50.10490 89 282 1.1E-32 T 29-03-2018 CKQ55_RS23595 d06d980ddc2d12ca45b9cdbe7d841b41 142 Gene3D G3DSA:3.40.50.620 2 137 8.3E-16 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS23595 d06d980ddc2d12ca45b9cdbe7d841b41 142 PIRSF PIRSF006276 1 141 1.2E-40 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS23595 d06d980ddc2d12ca45b9cdbe7d841b41 142 Pfam PF00582 Universal stress protein family 3 137 2.9E-11 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS23595 d06d980ddc2d12ca45b9cdbe7d841b41 142 SUPERFAMILY SSF52402 3 137 1.42E-22 T 29-03-2018 CKQ55_RS20280 9df982bbf60a56ccb75443a5696af45c 69 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 69 6.0E-23 T 29-03-2018 IPR022576 Protein of unknown function DUF2633 CKQ55_RS20280 9df982bbf60a56ccb75443a5696af45c 69 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 4.5E-30 T 29-03-2018 IPR022576 Protein of unknown function DUF2633 CKQ55_RS09095 ffbe72dd19e8237b63b94e5ef4b0162d 458 SUPERFAMILY SSF103473 22 455 7.59E-80 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS09095 ffbe72dd19e8237b63b94e5ef4b0162d 458 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 439 1.1E-258 T 29-03-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 CKQ55_RS09095 ffbe72dd19e8237b63b94e5ef4b0162d 458 Pfam PF07690 Major Facilitator Superfamily 40 413 1.2E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS09095 ffbe72dd19e8237b63b94e5ef4b0162d 458 Gene3D G3DSA:1.20.1250.20 247 454 3.8E-24 T 29-03-2018 CKQ55_RS09095 ffbe72dd19e8237b63b94e5ef4b0162d 458 Gene3D G3DSA:1.20.1250.20 14 243 1.3E-32 T 29-03-2018 CKQ55_RS19930 0f38adbceb3410ffcf903af028a9e72f 318 Pfam PF17188 MucB/RseB C-terminal domain 218 313 7.8E-28 T 29-03-2018 IPR033436 MucB/RseB, C-terminal CKQ55_RS19930 0f38adbceb3410ffcf903af028a9e72f 318 PIRSF PIRSF005427 1 318 1.9E-95 T 29-03-2018 IPR005588 MucB/RseB CKQ55_RS19930 0f38adbceb3410ffcf903af028a9e72f 318 Gene3D G3DSA:2.50.20.10 19 286 1.0E-21 T 29-03-2018 CKQ55_RS19930 0f38adbceb3410ffcf903af028a9e72f 318 Pfam PF03888 MucB/RseB N-terminal domain 28 208 1.4E-61 T 29-03-2018 IPR033434 MucB/RseB, N-terminal CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 SUPERFAMILY SSF54913 1 112 3.08E-42 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.7E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 PIRSF PIRSF039144 1 112 8.3E-53 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 SMART SM00938 4 105 3.5E-61 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 Gene3D G3DSA:3.30.70.120 1 108 4.5E-46 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 PRINTS PR00340 P-II protein signature 83 103 5.0E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 PRINTS PR00340 P-II protein signature 2 17 5.0E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 PRINTS PR00340 P-II protein signature 23 41 5.0E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS06120 948e1a2f91131a3087c99354eff28388 112 PRINTS PR00340 P-II protein signature 52 75 5.0E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 SUPERFAMILY SSF51419 9 233 1.62E-65 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 1.1E-65 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 Gene3D G3DSA:2.40.37.10 202 356 2.7E-62 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 1.1E-127 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 SUPERFAMILY SSF50621 227 355 2.79E-46 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 2.9E-42 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 248 263 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 27 43 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 190 217 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 286 303 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 121 133 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 265 280 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 338 351 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 61 79 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 PRINTS PR00992 Alanine racemase signature 155 166 1.2E-74 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 Gene3D G3DSA:3.20.20.10 5 201 8.1E-40 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 Hamap MF_01201 Alanine racemase. 2 356 34.188 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS24125 4108a66fe8a2a0d003f091abe9649dad 356 SMART SM01005 232 356 2.0E-65 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS08755 03da93cf5d62d690be6d1df0c2bdf303 323 Pfam PF12710 haloacid dehalogenase-like hydrolase 150 281 1.8E-18 T 29-03-2018 CKQ55_RS08755 03da93cf5d62d690be6d1df0c2bdf303 323 SUPERFAMILY SSF56784 110 317 2.17E-50 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS08755 03da93cf5d62d690be6d1df0c2bdf303 323 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 3.1E-93 T 29-03-2018 CKQ55_RS08755 03da93cf5d62d690be6d1df0c2bdf303 323 Gene3D G3DSA:3.40.50.1000 171 316 5.7E-29 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS08755 03da93cf5d62d690be6d1df0c2bdf303 323 Gene3D G3DSA:1.10.150.210 124 170 5.6E-22 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CKQ55_RS08755 03da93cf5d62d690be6d1df0c2bdf303 323 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 284 1.4E-26 T 29-03-2018 CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 SUPERFAMILY SSF56235 2 259 2.74E-75 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 6.9E-8 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 Gene3D G3DSA:3.60.20.10 45 278 1.9E-55 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 SUPERFAMILY SSF53271 252 485 2.1E-72 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.025 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 Pfam PF13522 Glutamine amidotransferase domain 63 202 6.7E-16 T 29-03-2018 CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.2E-163 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 PIRSF PIRSF000485 1 483 1.5E-173 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CKQ55_RS20955 ea3b172d43fd5a6545c2a8c2b033f2da 505 Gene3D G3DSA:3.40.50.2020 279 446 3.8E-38 T 29-03-2018 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 Gene3D G3DSA:2.60.120.10 15 231 1.6E-22 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 SMART SM00342 185 268 2.9E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 Gene3D G3DSA:1.10.10.60 232 273 5.9E-13 T 29-03-2018 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 SUPERFAMILY SSF51182 12 190 4.27E-10 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 SUPERFAMILY SSF46689 221 271 2.04E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 Pfam PF02311 AraC-like ligand binding domain 19 73 1.3E-10 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 264 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 Pfam PF12833 Helix-turn-helix domain 191 270 8.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 6.6E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS27795 04db9fe8e68dd77fb7979082cac48d54 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 6.6E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 SMART SM00839 190 420 1.9E-89 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 42 170 2.1E-54 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 SUPERFAMILY SSF51735 188 423 5.69E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 PIRSF PIRSF000185 9 423 6.7E-158 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 188 420 1.1E-72 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 SUPERFAMILY SSF53223 10 190 6.4E-69 T 29-03-2018 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 221 241 1.5E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 201 1.5E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 99 113 1.5E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 1.5E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 Gene3D G3DSA:3.40.50.10860 40 175 3.3E-52 T 29-03-2018 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 Gene3D G3DSA:3.40.50.720 188 423 3.3E-73 T 29-03-2018 CKQ55_RS28240 af4a3ce560ac155e0c84c8f57755c4e7 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 107 120 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS11005 95894cfa0925dfe7628081721d3b5ee9 449 Pfam PF00860 Permease family 26 409 1.2E-88 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 Gene3D G3DSA:3.40.930.10 145 278 1.8E-5 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 Gene3D G3DSA:3.40.930.10 3 143 1.5E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 Gene3D G3DSA:3.30.1340.10 282 369 1.3E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 2.0E-29 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 1.0E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.3E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 SUPERFAMILY SSF55594 287 375 2.49E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 SUPERFAMILY SSF55804 150 275 6.28E-13 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS21695 8690563c2b926cfe41c0087a29fa08de 376 SUPERFAMILY SSF55804 2 140 2.62E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 PIRSF PIRSF036298 1 300 6.9E-166 T 29-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Gene3D G3DSA:3.30.70.20 43 113 2.3E-21 T 29-03-2018 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 1.4E-21 T 29-03-2018 IPR015246 Formate dehydrogenase, transmembrane CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 3.0E-25 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 SUPERFAMILY SSF54862 28 272 2.72E-73 T 29-03-2018 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 2.0E-146 T 29-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Gene3D G3DSA:3.30.70.20 153 257 3.0E-23 T 29-03-2018 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Gene3D G3DSA:3.30.70.20 114 152 3.4E-16 T 29-03-2018 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Gene3D G3DSA:3.30.70.20 14 42 0.0044 T 29-03-2018 CKQ55_RS12670 95653b8097f9f1c588db181ba690ea7b 300 Gene3D G3DSA:1.20.5.480 258 291 3.1E-22 T 29-03-2018 CKQ55_RS09560 6ebb58f6e2e88f2362a230b77686c4c6 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 9.0E-26 T 29-03-2018 IPR009329 Protein of unknown function DUF987 CKQ55_RS09560 6ebb58f6e2e88f2362a230b77686c4c6 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 2.7E-39 T 29-03-2018 IPR009329 Protein of unknown function DUF987 CKQ55_RS16300 3af3000fe6f933d492d689af00d5f1ac 381 PIRSF PIRSF006078 1 377 1.3E-136 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS16300 3af3000fe6f933d492d689af00d5f1ac 381 Gene3D G3DSA:3.90.1510.10 42 276 4.7E-95 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CKQ55_RS16300 3af3000fe6f933d492d689af00d5f1ac 381 Pfam PF02595 Glycerate kinase family 3 373 5.1E-147 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS16300 3af3000fe6f933d492d689af00d5f1ac 381 SUPERFAMILY SSF110738 1 375 5.36E-139 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS16300 3af3000fe6f933d492d689af00d5f1ac 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 7.3E-168 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 SUPERFAMILY SSF52540 195 344 9.83E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 SUPERFAMILY SSF52540 385 673 9.83E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 Gene3D G3DSA:3.40.50.300 498 681 7.3E-25 T 29-03-2018 CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 Gene3D G3DSA:3.40.50.300 196 496 1.3E-44 T 29-03-2018 CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 163 1.0E-60 T 29-03-2018 IPR022161 DNA helicase IV, N-terminal domain CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 489 7.9E-43 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CKQ55_RS01875 a552659e5cc53fe0054305b3ba225ec6 684 Pfam PF13361 UvrD-like helicase C-terminal domain 563 663 5.5E-13 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CKQ55_RS12790 cdbfc5cb482a6791e5ef0173d5a50a6e 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-41 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 CKQ55_RS12790 cdbfc5cb482a6791e5ef0173d5a50a6e 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.9E-46 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 SUPERFAMILY SSF56601 29 287 2.82E-76 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 Pfam PF13354 Beta-lactamase enzyme family 53 261 4.1E-39 T 29-03-2018 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 Gene3D G3DSA:3.40.710.10 26 287 1.8E-33 T 29-03-2018 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 141 165 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 32 56 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 105 130 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 63 80 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 203 218 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 167 192 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS30370 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 220 235 4.3E-72 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS13790 a82a37e6bd5ab1daa0173a30ea394c88 314 SUPERFAMILY SSF51735 1 306 8.57E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13790 a82a37e6bd5ab1daa0173a30ea394c88 314 Gene3D G3DSA:3.90.25.10 183 312 3.8E-18 T 29-03-2018 CKQ55_RS13790 a82a37e6bd5ab1daa0173a30ea394c88 314 Gene3D G3DSA:3.40.50.720 1 182 5.2E-23 T 29-03-2018 CKQ55_RS13790 a82a37e6bd5ab1daa0173a30ea394c88 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 7.3E-137 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CKQ55_RS13790 a82a37e6bd5ab1daa0173a30ea394c88 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 6.3E-45 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS13790 a82a37e6bd5ab1daa0173a30ea394c88 314 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.658 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 Pfam PF07702 UTRA domain 96 235 2.2E-27 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 5.2E-93 T 29-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 SUPERFAMILY SSF46785 8 82 2.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 SMART SM00345 17 75 1.1E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 Gene3D G3DSA:3.40.1410.10 79 241 3.0E-29 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 SUPERFAMILY SSF64288 63 240 1.33E-35 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 SMART SM00866 96 236 1.1E-20 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 1.2E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS10830 49a2c68a7757bb303066a25e4c94a71e 241 Gene3D G3DSA:1.10.10.10 4 76 8.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 SUPERFAMILY SSF69279 15 191 4.12E-49 T 29-03-2018 CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 1.3E-71 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 491 593 9.3E-36 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 Gene3D G3DSA:3.55.50.10 111 207 1.5E-26 T 29-03-2018 CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 SUPERFAMILY SSF69255 383 473 3.14E-26 T 29-03-2018 CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 Pfam PF05954 Phage late control gene D protein (GPD) 34 356 5.8E-61 T 29-03-2018 CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 613 755 1.1E-43 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 517 1.7E-142 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 Gene3D G3DSA:4.10.180.10 297 312 7.8E-8 T 29-03-2018 CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 SUPERFAMILY SSF69279 203 383 4.42E-42 T 29-03-2018 CKQ55_RS25205 d2fca9bd0b06c438baa610be416bf646 780 Gene3D G3DSA:2.40.50.230 389 473 2.6E-22 T 29-03-2018 IPR006531 Gp5 N-terminal CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 258 7.8E-35 T 29-03-2018 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 Gene3D G3DSA:3.40.190.10 33 127 0.031 T 29-03-2018 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 Gene3D G3DSA:3.40.190.10 128 279 1.3E-16 T 29-03-2018 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 SUPERFAMILY SSF55874 430 573 9.17E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 SUPERFAMILY SSF53850 66 216 4.94E-16 T 29-03-2018 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 Gene3D G3DSA:3.30.565.10 427 589 1.3E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 Gene3D G3DSA:1.10.287.130 338 417 5.4E-7 T 29-03-2018 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 573 1.6E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 SUPERFAMILY SSF47384 344 418 7.46E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 533 5.7E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 5.7E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 5.7E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 SMART SM00388 354 423 0.0021 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS27010 4925e3b942b60477b6edee8b48a8a038 590 SMART SM00387 470 578 5.7E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS31080 616485518ad68d7ad351597dc66877c5 101 PIRSF PIRSF003259 1 101 5.2E-53 T 29-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 CKQ55_RS31080 616485518ad68d7ad351597dc66877c5 101 Pfam PF07178 TraL protein 9 100 9.1E-32 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CKQ55_RS31080 616485518ad68d7ad351597dc66877c5 101 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 7 100 3.8E-21 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CKQ55_RS21810 0b0220dd60454b4efdad90c459ffa720 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 9.0E-105 T 29-03-2018 IPR005261 Conserved hypothetical protein CHP00659 CKQ55_RS21810 0b0220dd60454b4efdad90c459ffa720 231 Pfam PF04172 LrgB-like family 12 224 4.1E-79 T 29-03-2018 IPR007300 CidB/LrgB family CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:3.40.50.980 453 605 3.1E-43 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:3.30.559.10 1 215 1.7E-18 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SUPERFAMILY SSF52777 190 426 1.01E-33 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SUPERFAMILY SSF56801 423 988 2.62E-147 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:3.40.50.1820 1055 1293 1.2E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SUPERFAMILY SSF53474 1050 1292 7.01E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 886 2.4E-127 T 29-03-2018 IPR010071 Amino acid adenylation domain CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SMART SM00824 Thioesterase 1070 1288 2.6E-4 T 29-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1000 1015 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SUPERFAMILY SSF47336 970 1042 1.83E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:3.30.300.30 857 979 2.5E-28 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Pfam PF00668 Condensation domain 3 442 8.2E-87 T 29-03-2018 IPR001242 Condensation domain CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:3.40.50.980 606 765 1.2E-41 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SMART SM00823 Phosphopantetheine attachment site 976 1045 0.0013 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:1.10.1200.10 980 1054 2.5E-17 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Pfam PF13193 AMP-binding enzyme C-terminal domain 883 951 1.3E-6 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Pfam PF00550 Phosphopantetheine attachment site 979 1041 8.9E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Pfam PF00975 Thioesterase domain 1068 1283 5.4E-46 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 SUPERFAMILY SSF52777 9 183 6.23E-30 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Gene3D G3DSA:2.30.38.10 775 854 3.1E-22 T 29-03-2018 CKQ55_RS04470 a160f61ed09b0eabe531cbb0585b7c58 1293 Pfam PF00501 AMP-binding enzyme 462 862 5.8E-97 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 Gene3D G3DSA:3.40.50.300 324 577 4.9E-67 T 29-03-2018 CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 SMART SM00382 361 547 3.8E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 SUPERFAMILY SSF90123 7 327 1.44E-70 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 SUPERFAMILY SSF52540 329 572 2.87E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 Pfam PF00664 ABC transporter transmembrane region 21 291 1.4E-35 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 Pfam PF00005 ABC transporter 352 500 6.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 Gene3D G3DSA:1.20.1560.10 1 323 1.1E-56 T 29-03-2018 CKQ55_RS06135 97819913a657e5464d23f9d0fc9e07d4 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS05765 cba2e7b3308d4119b15a27679960febd 102 Pfam PF08803 Putative mono-oxygenase ydhR 5 99 1.7E-40 T 29-03-2018 IPR014910 Putative monooxygenase YdhR CKQ55_RS05765 cba2e7b3308d4119b15a27679960febd 102 SUPERFAMILY SSF54909 4 98 1.3E-32 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 Gene3D G3DSA:3.40.228.10 1 270 2.6E-69 T 29-03-2018 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 Pfam PF00384 Molybdopterin oxidoreductase 2 377 3.9E-20 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 Gene3D G3DSA:2.40.40.20 629 804 2.9E-41 T 29-03-2018 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 29-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 2.7E-17 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 SUPERFAMILY SSF53706 1 639 4.83E-232 T 29-03-2018 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 SUPERFAMILY SSF50692 618 648 2.69E-43 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 SUPERFAMILY SSF50692 675 804 2.69E-43 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 Gene3D G3DSA:3.40.50.740 271 449 6.5E-26 T 29-03-2018 CKQ55_RS12665 3633389c4736a8ebd39f2cf52e474127 804 Gene3D G3DSA:3.40.228.10 549 628 5.4E-14 T 29-03-2018 CKQ55_RS18425 da2f131c69258dd5c5f80709685671e3 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 1.0E-215 T 29-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CKQ55_RS18425 da2f131c69258dd5c5f80709685671e3 401 SUPERFAMILY SSF53383 8 397 2.78E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS18425 da2f131c69258dd5c5f80709685671e3 401 Gene3D G3DSA:3.40.640.10 32 278 3.1E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS18425 da2f131c69258dd5c5f80709685671e3 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CKQ55_RS18425 da2f131c69258dd5c5f80709685671e3 401 Pfam PF00266 Aminotransferase class-V 21 388 1.5E-135 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS18425 da2f131c69258dd5c5f80709685671e3 401 Gene3D G3DSA:3.90.1150.10 279 395 3.2E-36 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS05845 8fbe5eee3b6dd698292cf411d2bc22e6 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 146 1.3E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05845 8fbe5eee3b6dd698292cf411d2bc22e6 746 Gene3D G3DSA:2.40.170.20 164 746 2.3E-63 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05845 8fbe5eee3b6dd698292cf411d2bc22e6 746 SUPERFAMILY SSF56935 23 746 6.23E-95 T 29-03-2018 CKQ55_RS05845 8fbe5eee3b6dd698292cf411d2bc22e6 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS05845 8fbe5eee3b6dd698292cf411d2bc22e6 746 Gene3D G3DSA:2.170.130.10 21 163 4.7E-15 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05845 8fbe5eee3b6dd698292cf411d2bc22e6 746 Pfam PF00593 TonB dependent receptor 236 744 1.6E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27255 d413f451a8d1cd37c0d183b108fced44 217 Gene3D G3DSA:1.10.472.20 1 107 3.4E-38 T 29-03-2018 CKQ55_RS27255 d413f451a8d1cd37c0d183b108fced44 217 PIRSF PIRSF001427 1 217 8.5E-78 T 29-03-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27255 d413f451a8d1cd37c0d183b108fced44 217 Pfam PF02211 Nitrile hydratase beta subunit 1 215 2.0E-75 T 29-03-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27255 d413f451a8d1cd37c0d183b108fced44 217 TIGRFAM TIGR03888 nitrile_beta: nitrile hydratase, beta subunit 1 217 6.5E-87 T 29-03-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27255 d413f451a8d1cd37c0d183b108fced44 217 Gene3D G3DSA:2.30.30.50 109 216 2.3E-34 T 29-03-2018 CKQ55_RS27255 d413f451a8d1cd37c0d183b108fced44 217 SUPERFAMILY SSF50090 1 217 2.86E-75 T 29-03-2018 IPR008990 Electron transport accessory protein-like domain CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Gene3D G3DSA:2.70.98.10 710 857 3.2E-26 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Gene3D G3DSA:2.60.120.260 1 206 4.1E-62 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Pfam PF02929 Beta galactosidase small chain 729 854 8.1E-13 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 43 208 5.3E-46 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 SUPERFAMILY SSF49303 209 318 5.47E-22 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 29-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 SUPERFAMILY SSF74650 713 856 4.39E-26 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Gene3D G3DSA:2.60.40.10 600 707 9.5E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 SMART SM01038 727 856 1.1E-5 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 603 3.0E-116 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 SUPERFAMILY SSF51445 320 598 1.38E-81 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 1.0E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 1.0E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 1.0E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 1.0E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 1.0E-32 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Pfam PF16353 Domain of unknown function(DUF4981) 614 699 1.7E-13 T 29-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Gene3D G3DSA:3.20.20.80 319 599 1.5E-62 T 29-03-2018 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 SUPERFAMILY SSF49303 607 703 6.12E-21 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Pfam PF00703 Glycosyl hydrolases family 2 210 318 3.7E-15 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 SUPERFAMILY SSF49785 1 207 2.98E-63 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS16545 f36bd96d05feef80389733aebf3a4157 857 Gene3D G3DSA:2.60.40.10 208 318 9.8E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS19310 ab28ca91d6d5e53c5b397c02a1626cdd 518 SUPERFAMILY SSF55931 4 514 6.47E-202 T 29-03-2018 CKQ55_RS19310 ab28ca91d6d5e53c5b397c02a1626cdd 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 516 2.3E-272 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CKQ55_RS19310 ab28ca91d6d5e53c5b397c02a1626cdd 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 230.076 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CKQ55_RS19310 ab28ca91d6d5e53c5b397c02a1626cdd 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 6.2E-172 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 SUPERFAMILY SSF53850 89 294 1.33E-40 T 29-03-2018 CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 Gene3D G3DSA:3.40.190.10 89 176 1.2E-17 T 29-03-2018 CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 SUPERFAMILY SSF46785 1 112 2.13E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 Pfam PF03466 LysR substrate binding domain 89 294 3.4E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 Gene3D G3DSA:3.40.190.10 177 265 3.2E-19 T 29-03-2018 CKQ55_RS18765 944b0eb202995e727c5c3ec21f47d09b 295 Gene3D G3DSA:1.10.10.10 1 84 2.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28625 fa51e3b9b0d30b8dc868c528d6dcee33 180 Pfam PF09374 Predicted Peptidoglycan domain 96 177 4.9E-23 T 29-03-2018 IPR018537 Peptidoglycan binding domain CKQ55_RS28625 fa51e3b9b0d30b8dc868c528d6dcee33 180 Gene3D G3DSA:1.20.141.10 1 180 3.3E-43 T 29-03-2018 CKQ55_RS28625 fa51e3b9b0d30b8dc868c528d6dcee33 180 Pfam PF05838 Glycosyl hydrolase 108 7 90 1.6E-25 T 29-03-2018 IPR008565 Protein of unknown function DUF847 CKQ55_RS28625 fa51e3b9b0d30b8dc868c528d6dcee33 180 SUPERFAMILY SSF53955 2 175 3.94E-45 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS10875 1a342209d39f5971324ed2b87c4b3fe4 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 4 248 1.2E-118 T 29-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS10875 1a342209d39f5971324ed2b87c4b3fe4 252 Pfam PF12706 Beta-lactamase superfamily domain 72 223 1.8E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS10875 1a342209d39f5971324ed2b87c4b3fe4 252 SUPERFAMILY SSF56281 5 251 1.47E-33 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS10875 1a342209d39f5971324ed2b87c4b3fe4 252 Gene3D G3DSA:3.60.15.10 1 252 5.3E-46 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 SUPERFAMILY SSF46785 4 58 1.15E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 SMART SM01134 74 234 3.1E-45 T 29-03-2018 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 Pfam PF08220 DeoR-like helix-turn-helix domain 5 59 5.0E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 Gene3D G3DSA:1.10.10.10 1 64 6.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 SMART SM00420 5 57 8.3E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 Gene3D G3DSA:3.40.50.1360 66 233 6.0E-27 T 29-03-2018 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.8E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.8E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 SUPERFAMILY SSF100950 76 234 3.87E-25 T 29-03-2018 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS15685 6995eaab0fb037adf317cca95db4c3f1 248 Pfam PF00455 DeoR C terminal sensor domain 76 232 7.3E-42 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS29460 5bc1d230134908df990dda6acd9f2977 348 Pfam PF01343 Peptidase family S49 160 308 1.8E-42 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CKQ55_RS29460 5bc1d230134908df990dda6acd9f2977 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 5.7E-59 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CKQ55_RS29460 5bc1d230134908df990dda6acd9f2977 348 SUPERFAMILY SSF52096 98 208 1.25E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS29460 5bc1d230134908df990dda6acd9f2977 348 SUPERFAMILY SSF52096 239 298 1.25E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS29460 5bc1d230134908df990dda6acd9f2977 348 Gene3D G3DSA:3.90.226.10 28 306 1.4E-30 T 29-03-2018 CKQ55_RS30420 d0ca201510ed739b489b86b1e4228af7 597 SUPERFAMILY SSF52540 146 313 6.75E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30420 d0ca201510ed739b489b86b1e4228af7 597 SUPERFAMILY SSF52540 375 568 6.75E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30420 d0ca201510ed739b489b86b1e4228af7 597 Pfam PF01935 Domain of unknown function DUF87 149 417 2.4E-32 T 29-03-2018 IPR002789 Helicase HerA, central domain CKQ55_RS30420 d0ca201510ed739b489b86b1e4228af7 597 Pfam PF05872 Bacterial protein of unknown function (DUF853) 430 541 4.3E-7 T 29-03-2018 IPR033186 Helicase HerA-like C-terminal CKQ55_RS30420 d0ca201510ed739b489b86b1e4228af7 597 Gene3D G3DSA:3.40.50.300 83 527 1.4E-29 T 29-03-2018 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 SUPERFAMILY SSF56059 481 686 8.11E-29 T 29-03-2018 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Gene3D G3DSA:3.40.50.720 1 129 4.8E-28 T 29-03-2018 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Pfam PF13380 CoA binding domain 13 129 1.1E-19 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Pfam PF00583 Acetyltransferase (GNAT) family 762 863 8.9E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 SUPERFAMILY SSF51735 2 136 1.93E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Gene3D G3DSA:3.30.1490.20 500 561 5.9E-26 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Gene3D G3DSA:3.40.630.30 717 891 6.8E-24 T 29-03-2018 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Pfam PF13549 ATP-grasp domain 473 694 1.8E-75 T 29-03-2018 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Gene3D G3DSA:3.40.50.261 130 284 6.4E-38 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Gene3D G3DSA:3.40.50.261 285 452 1.2E-32 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 SUPERFAMILY SSF55729 615 866 1.48E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Gene3D G3DSA:3.30.470.20 562 697 4.5E-25 T 29-03-2018 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 SMART SM00881 9 104 4.4E-24 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 SUPERFAMILY SSF52210 125 286 1.28E-34 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.5E-45 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CKQ55_RS19870 a50a27489df821bd9a3472ee965f8a63 892 SUPERFAMILY SSF52210 287 447 5.63E-36 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS17290 bdf7506e899d6e28bf0ad57c2735dc11 331 Gene3D G3DSA:1.10.287.130 264 325 6.7E-12 T 29-03-2018 CKQ55_RS17290 bdf7506e899d6e28bf0ad57c2735dc11 331 Pfam PF03308 ArgK protein 22 292 2.5E-107 T 29-03-2018 CKQ55_RS17290 bdf7506e899d6e28bf0ad57c2735dc11 331 SUPERFAMILY SSF52540 4 322 7.67E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17290 bdf7506e899d6e28bf0ad57c2735dc11 331 Gene3D G3DSA:1.20.5.170 6 50 4.0E-15 T 29-03-2018 CKQ55_RS17290 bdf7506e899d6e28bf0ad57c2735dc11 331 Gene3D G3DSA:3.40.50.300 52 262 1.1E-29 T 29-03-2018 CKQ55_RS17290 bdf7506e899d6e28bf0ad57c2735dc11 331 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 323 1.8E-121 T 29-03-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Gene3D G3DSA:3.40.50.1010 7 180 7.7E-68 T 29-03-2018 IPR029060 PIN domain-like CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SMART SM00474 331 518 6.1E-47 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 876 889 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 1.5E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Pfam PF01612 3'-5' exonuclease 331 518 7.3E-44 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Pfam PF00476 DNA polymerase family A 553 926 2.2E-159 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 TIGRFAM TIGR00593 pola: DNA polymerase I 9 929 4.2E-287 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Gene3D G3DSA:3.30.420.10 321 543 3.6E-50 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SUPERFAMILY SSF47807 171 291 2.24E-29 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SUPERFAMILY SSF56672 524 929 1.45E-162 T 29-03-2018 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SMART SM00475 7 268 5.4E-139 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Gene3D G3DSA:1.10.150.20 181 250 6.3E-24 T 29-03-2018 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 270 3.6E-29 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Gene3D G3DSA:1.20.1060.10 544 657 1.6E-33 T 29-03-2018 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 8.7E-54 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SUPERFAMILY SSF88723 7 170 3.93E-57 T 29-03-2018 IPR029060 PIN domain-like CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SUPERFAMILY SSF53098 328 519 2.89E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SMART SM00482 687 893 1.4E-125 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Gene3D G3DSA:3.30.70.370 658 754 5.5E-18 T 29-03-2018 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 Gene3D G3DSA:3.30.70.370 755 929 1.6E-52 T 29-03-2018 CKQ55_RS12770 43f4778b46919f77fc8ef0b32bff0550 929 SMART SM00279 173 208 1.2E-13 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CKQ55_RS27570 5103d9ad29c4c9b7b7b1a99e0433569a 624 Pfam PF00384 Molybdopterin oxidoreductase 114 489 4.9E-23 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS27570 5103d9ad29c4c9b7b7b1a99e0433569a 624 Gene3D G3DSA:3.40.50.740 333 614 3.3E-47 T 29-03-2018 CKQ55_RS27570 5103d9ad29c4c9b7b7b1a99e0433569a 624 SUPERFAMILY SSF53706 52 624 3.8E-143 T 29-03-2018 CKQ55_RS27570 5103d9ad29c4c9b7b7b1a99e0433569a 624 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 624 2.5E-244 T 29-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 CKQ55_RS27570 5103d9ad29c4c9b7b7b1a99e0433569a 624 Gene3D G3DSA:3.40.50.740 115 327 9.0E-34 T 29-03-2018 CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 300 1.5E-163 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.115 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.9E-109 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 SUPERFAMILY SSF54211 3 124 6.6E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 SUPERFAMILY SSF54211 134 278 3.26E-54 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 Gene3D G3DSA:3.30.1700.10 129 299 2.8E-70 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS08105 e585aea3114824b47f38a10fe1b2caf0 305 Gene3D G3DSA:3.30.230.20 1 128 1.1E-48 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 SUPERFAMILY SSF82689 181 278 2.09E-32 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 SUPERFAMILY SSF50182 114 179 1.21E-16 T 29-03-2018 IPR010920 LSM domain CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 Gene3D G3DSA:2.30.30.60 129 179 3.3E-15 T 29-03-2018 CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 Pfam PF00924 Mechanosensitive ion channel 72 267 9.7E-57 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 Gene3D G3DSA:3.30.70.100 180 273 4.4E-28 T 29-03-2018 CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 Pfam PF05552 Conserved TM helix 16 64 1.6E-14 T 29-03-2018 IPR008910 Conserved TM helix CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CKQ55_RS17260 b9f84222a419e65a162aff5e90590d48 285 SUPERFAMILY SSF82861 28 112 9.29E-18 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 Pfam PF00732 GMC oxidoreductase 3 300 4.4E-102 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 SUPERFAMILY SSF51905 2 293 1.81E-85 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 SUPERFAMILY SSF51905 476 535 1.81E-85 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 60.789 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 Gene3D G3DSA:4.10.450.10 38 103 3.4E-25 T 29-03-2018 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 SUPERFAMILY SSF54373 295 477 4.32E-66 T 29-03-2018 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 Pfam PF05199 GMC oxidoreductase 393 527 2.3E-42 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 PIRSF PIRSF000137 1 540 1.2E-138 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 7.7E-299 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CKQ55_RS04580 40dfafd61b769da60740e23b39b51c53 554 Gene3D G3DSA:3.30.560.10 104 490 1.5E-100 T 29-03-2018 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 SMART SM01130 4 293 1.5E-93 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 PIRSF PIRSF001365 1 292 4.0E-70 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 Gene3D G3DSA:3.20.20.70 1 293 3.0E-80 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.7E-19 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 SUPERFAMILY SSF51569 5 276 6.8E-76 T 29-03-2018 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 Pfam PF00701 Dihydrodipicolinate synthetase family 6 272 6.5E-62 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS26485 f81e5e6c0a8937fac765829536b47a47 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 PIRSF PIRSF000193 1 262 1.3E-62 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 155 259 5.4E-24 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 259 20.76 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 95 6.2E-6 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 SUPERFAMILY SSF48179 154 261 1.68E-25 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 Gene3D G3DSA:1.10.3730.10 158 262 1.9E-28 T 29-03-2018 CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 SUPERFAMILY SSF51735 3 152 2.1E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26720 c4a0ad6a7fdd08d6573e40e105bfd1e4 262 Gene3D G3DSA:3.40.50.720 1 157 1.5E-16 T 29-03-2018 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 SMART SM00342 194 277 3.9E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 SUPERFAMILY SSF51215 8 163 4.18E-35 T 29-03-2018 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 Gene3D G3DSA:2.60.120.280 7 170 9.3E-26 T 29-03-2018 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 Gene3D G3DSA:1.10.10.60 230 280 3.0E-12 T 29-03-2018 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 Pfam PF02311 AraC-like ligand binding domain 24 160 9.7E-24 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 SUPERFAMILY SSF46689 231 279 3.27E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 Pfam PF12833 Helix-turn-helix domain 200 278 4.1E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 Gene3D G3DSA:1.10.10.60 176 229 2.9E-11 T 29-03-2018 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 SUPERFAMILY SSF46689 176 227 9.86E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS08300 7292ba30c9a3e6c25ad18abe182536ed 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS25165 c455b3f484a432adef8504cd84bd307c 360 Gene3D G3DSA:1.20.5.460 282 309 6.9E-18 T 29-03-2018 CKQ55_RS25165 c455b3f484a432adef8504cd84bd307c 360 SUPERFAMILY SSF89733 6 348 8.37E-100 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CKQ55_RS25165 c455b3f484a432adef8504cd84bd307c 360 Gene3D G3DSA:3.30.1370.60 78 280 8.6E-73 T 29-03-2018 CKQ55_RS25165 c455b3f484a432adef8504cd84bd307c 360 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 8.5E-109 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CKQ55_RS25165 c455b3f484a432adef8504cd84bd307c 360 Gene3D G3DSA:1.10.1530.10 5 77 1.6E-22 T 29-03-2018 CKQ55_RS21445 24cfd861a712ab06e1ffca800a1dcad7 415 Pfam PF00916 Sulfate permease family 157 344 3.6E-22 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CKQ55_RS21445 24cfd861a712ab06e1ffca800a1dcad7 415 Pfam PF00916 Sulfate permease family 29 152 2.9E-16 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 Gene3D G3DSA:3.55.40.10 35 162 2.0E-18 T 29-03-2018 CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 2 148 1.2E-16 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 SUPERFAMILY SSF54523 6 140 6.67E-13 T 29-03-2018 CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 1.6E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 9.8E-20 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 PRINTS PR00885 Bacterial general secretion pathway protein H signature 131 146 9.8E-20 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07770 c8876449c30dbd912b97d5e3a0333ce3 170 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 9.8E-20 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS25280 d25894f549fad02ce671aea54872cda0 1156 Pfam PF06761 Intracellular multiplication and human macrophage-killing 431 748 2.4E-71 T 29-03-2018 IPR009612 ImcF-related CKQ55_RS25280 d25894f549fad02ce671aea54872cda0 1156 Gene3D G3DSA:1.20.1250.20 2 421 1.6E-4 T 29-03-2018 CKQ55_RS25280 d25894f549fad02ce671aea54872cda0 1156 Pfam PF06744 Type VI secretion protein IcmF C-terminal 882 1079 5.6E-55 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 Pfam PF12221 Bacterial membrane protein N terminal 1 60 5.7E-15 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 PRINTS PR00721 Stomatin signature 184 201 9.1E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 PRINTS PR00721 Stomatin signature 102 124 9.1E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 PRINTS PR00721 Stomatin signature 149 170 9.1E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 SUPERFAMILY SSF117892 128 259 1.83E-20 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 Pfam PF01145 SPFH domain / Band 7 family 99 270 3.4E-30 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 SMART SM00244 95 255 3.4E-43 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS10510 7c0364ad164330d417350e13d1f0d44c 418 TIGRFAM TIGR01933 hflK: HflK protein 97 356 4.6E-124 T 29-03-2018 IPR010201 HflK GO:0016021 CKQ55_RS06915 6d6987fabb39d8ac910b63a7dbb83005 389 Gene3D G3DSA:1.10.150.130 88 204 1.5E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS06915 6d6987fabb39d8ac910b63a7dbb83005 389 SUPERFAMILY SSF56349 100 380 2.0E-63 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS06915 6d6987fabb39d8ac910b63a7dbb83005 389 Pfam PF00589 Phage integrase family 206 370 3.8E-25 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS06915 6d6987fabb39d8ac910b63a7dbb83005 389 Gene3D G3DSA:1.10.443.10 205 388 1.2E-27 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS06915 6d6987fabb39d8ac910b63a7dbb83005 389 Pfam PF13356 Arm DNA-binding domain 3 88 6.5E-20 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CKQ55_RS10355 d2adc239398ee34e8c54c70f7e89c3eb 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.1E-19 T 29-03-2018 IPR019903 Repair of iron centres family CKQ55_RS10355 d2adc239398ee34e8c54c70f7e89c3eb 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 51.092 T 29-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 CKQ55_RS10355 d2adc239398ee34e8c54c70f7e89c3eb 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 7.2E-81 T 29-03-2018 IPR019903 Repair of iron centres family CKQ55_RS10355 d2adc239398ee34e8c54c70f7e89c3eb 220 Gene3D G3DSA:1.20.120.520 61 218 5.2E-32 T 29-03-2018 CKQ55_RS10355 d2adc239398ee34e8c54c70f7e89c3eb 220 Gene3D G3DSA:1.10.3910.10 4 60 9.4E-12 T 29-03-2018 CKQ55_RS10355 d2adc239398ee34e8c54c70f7e89c3eb 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 7.8E-27 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 Gene3D G3DSA:1.10.10.60 53 106 2.8E-11 T 29-03-2018 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 Gene3D G3DSA:3.40.50.1390 1 35 3.8E-8 T 29-03-2018 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 Gene3D G3DSA:1.20.5.40 36 52 2.1E-13 T 29-03-2018 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 Pfam PF02796 Helix-turn-helix domain of resolvase 66 106 3.1E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 SUPERFAMILY SSF53041 2 63 3.66E-13 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 Pfam PF00239 Resolvase, N terminal domain 2 62 2.2E-14 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS02495 eb4d6da741801a4a345ce1402346de44 110 SUPERFAMILY SSF46689 66 106 8.96E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 5.6E-81 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 Pfam PF01578 Cytochrome C assembly protein 28 184 7.4E-32 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 2.3E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.3E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.3E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.3E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.3E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19525 cb59af255471fc8edb40ced95191aefb 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.3E-61 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19535 73bcf9dff5a5257d72fe1bcab8205665 159 SUPERFAMILY SSF82093 30 143 1.44E-39 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CKQ55_RS19535 73bcf9dff5a5257d72fe1bcab8205665 159 Gene3D G3DSA:2.40.50.140 27 131 7.4E-33 T 29-03-2018 CKQ55_RS19535 73bcf9dff5a5257d72fe1bcab8205665 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.321 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CKQ55_RS19535 73bcf9dff5a5257d72fe1bcab8205665 159 Pfam PF03100 CcmE 4 137 9.7E-45 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CKQ55_RS12200 d66f05de2feb993e0f125cf3d8359e01 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 7.8E-77 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12200 d66f05de2feb993e0f125cf3d8359e01 258 SUPERFAMILY SSF53633 1 256 3.93E-62 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS12200 d66f05de2feb993e0f125cf3d8359e01 258 Pfam PF00696 Amino acid kinase family 5 235 2.9E-40 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS12200 d66f05de2feb993e0f125cf3d8359e01 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 27.391 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12200 d66f05de2feb993e0f125cf3d8359e01 258 PIRSF PIRSF000728 1 258 2.7E-74 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12200 d66f05de2feb993e0f125cf3d8359e01 258 Gene3D G3DSA:3.40.1160.10 1 258 9.4E-47 T 29-03-2018 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.2E-20 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 2.4E-71 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 Gene3D G3DSA:3.40.50.720 1 167 2.1E-21 T 29-03-2018 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 169 289 5.9E-35 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 Gene3D G3DSA:1.10.1040.10 168 298 7.0E-38 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 SUPERFAMILY SSF48179 168 289 1.33E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS06325 96135e033e267ea9ebeb19bb89c383c8 303 SUPERFAMILY SSF51735 1 167 5.19E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15495 f8fdef2d50ed19d780e96710dc056585 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 2.6E-59 T 29-03-2018 IPR007456 Smg CKQ55_RS15495 f8fdef2d50ed19d780e96710dc056585 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.235 T 29-03-2018 IPR007456 Smg CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 3.8E-164 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 SUPERFAMILY SSF51658 1 133 2.75E-78 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 SUPERFAMILY SSF51658 163 383 2.75E-78 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 PIRSF PIRSF016049 1 392 4.1E-184 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 224.618 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 Gene3D G3DSA:3.20.20.150 1 173 5.1E-65 T 29-03-2018 CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 Gene3D G3DSA:3.20.20.150 174 391 3.7E-48 T 29-03-2018 CKQ55_RS07150 550287c87ca2002f9c964084419d98c6 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 8.8E-233 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 SUPERFAMILY SSF52335 5 151 2.62E-58 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 29-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 2.4E-71 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 Pfam PF02142 MGS-like domain 26 118 7.6E-18 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 SMART SM00851 25 118 3.3E-24 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 Gene3D G3DSA:3.40.50.1380 1 152 6.4E-44 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 PIRSF PIRSF006614 8 151 6.2E-65 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CKQ55_RS01870 29552285cb5c8b32d20d82ef77d45420 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 39.622 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CKQ55_RS16930 ae537b5a5c587d628c21d9bb076b2ba5 295 Gene3D G3DSA:3.40.50.1820 68 295 4.5E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS16930 ae537b5a5c587d628c21d9bb076b2ba5 295 Pfam PF01738 Dienelactone hydrolase family 85 293 1.2E-51 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CKQ55_RS16930 ae537b5a5c587d628c21d9bb076b2ba5 295 SUPERFAMILY SSF53474 70 293 6.51E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 Gene3D G3DSA:1.10.3660.10 249 372 5.2E-33 T 29-03-2018 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 SMART SM00830 9 89 6.5E-30 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 PIRSF PIRSF001499 1 373 7.5E-185 T 29-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 Gene3D G3DSA:3.40.50.720 91 247 2.2E-27 T 29-03-2018 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 SUPERFAMILY SSF48600 4 88 6.96E-23 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 6.4E-45 T 29-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 Gene3D G3DSA:1.20.59.10 2 90 1.2E-23 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 Pfam PF01817 Chorismate mutase type II 9 86 1.2E-20 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 SUPERFAMILY SSF51735 91 238 1.3E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 SUPERFAMILY SSF48179 241 366 1.03E-42 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS19785 16cc0d48ae103c1319f080f69ebd7cca 373 Pfam PF02153 Prephenate dehydrogenase 138 344 4.9E-30 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CKQ55_RS02695 05aa61d9aa02fee07ee7c58f8878cbff 234 Pfam PF13610 DDE domain 75 212 1.8E-49 T 29-03-2018 IPR032874 DDE domain CKQ55_RS02695 05aa61d9aa02fee07ee7c58f8878cbff 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02695 05aa61d9aa02fee07ee7c58f8878cbff 234 Gene3D G3DSA:3.30.420.10 72 210 6.4E-13 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02695 05aa61d9aa02fee07ee7c58f8878cbff 234 SUPERFAMILY SSF53098 75 191 1.52E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 Pfam PF13899 Thioredoxin-like 562 642 9.2E-12 T 29-03-2018 CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 280 482 1.7E-9 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 Pfam PF11412 Disulphide bond corrector protein DsbC 35 143 1.6E-16 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 Gene3D G3DSA:2.60.40.1250 29 153 2.0E-4 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 ProSitePatterns PS00194 Thioredoxin family active site. 581 599 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 Gene3D G3DSA:3.40.30.10 547 654 4.6E-8 T 29-03-2018 CKQ55_RS01430 077decc33a9e84bad04005c181eed719 674 SUPERFAMILY SSF52833 560 669 5.49E-12 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Gene3D G3DSA:2.40.30.10 295 406 2.0E-29 T 29-03-2018 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SUPERFAMILY SSF52540 6 288 1.3E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.97 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 29-03-2018 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Gene3D G3DSA:3.30.70.870 407 500 3.4E-36 T 29-03-2018 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SUPERFAMILY SSF50447 271 411 6.85E-35 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Pfam PF00679 Elongation factor G C-terminus 611 696 8.1E-29 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SUPERFAMILY SSF54980 611 700 2.95E-27 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Gene3D G3DSA:3.30.70.240 625 702 7.2E-29 T 29-03-2018 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Gene3D G3DSA:3.40.50.300 1 293 2.6E-58 T 29-03-2018 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.8E-67 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Gene3D G3DSA:3.30.230.10 501 624 4.0E-39 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SMART SM00838 611 698 2.2E-50 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SMART SM00889 487 609 4.6E-71 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.7E-44 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 4.8E-32 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 SUPERFAMILY SSF54211 486 610 1.82E-39 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS15275 0a1295886beab551536c3aeea93f3503 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.4E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 Pfam PF07690 Major Facilitator Superfamily 29 282 2.6E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 7 403 3.1E-134 T 29-03-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 SUPERFAMILY SSF103473 12 437 5.75E-84 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 Gene3D G3DSA:1.20.1250.20 237 449 1.5E-25 T 29-03-2018 CKQ55_RS14080 898744113b3e241f7df000f66844425a 452 Gene3D G3DSA:1.20.1250.20 13 214 2.9E-41 T 29-03-2018 CKQ55_RS17265 95b036ef51e761ca0f636e66d8321da1 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.772 T 29-03-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 CKQ55_RS17265 95b036ef51e761ca0f636e66d8321da1 211 Pfam PF01810 LysE type translocator 14 201 2.2E-54 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS17265 95b036ef51e761ca0f636e66d8321da1 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 1.0E-70 T 29-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 CKQ55_RS00905 29deae445a3494033fdc806bedd25d7f 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 4.8E-148 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CKQ55_RS00905 29deae445a3494033fdc806bedd25d7f 306 PIRSF PIRSF026649 2 306 1.7E-109 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CKQ55_RS00905 29deae445a3494033fdc806bedd25d7f 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 4.8E-115 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CKQ55_RS00905 29deae445a3494033fdc806bedd25d7f 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.539 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 338 221.033 T 29-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 Gene3D G3DSA:1.10.8.60 276 337 7.8E-32 T 29-03-2018 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 SUPERFAMILY SSF89000 288 336 8.24E-18 T 29-03-2018 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 336 9.0E-28 T 29-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 Gene3D G3DSA:3.20.20.70 2 275 6.0E-58 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 335 1.4E-177 T 29-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 Pfam PF07836 DmpG-like communication domain 274 333 4.5E-30 T 29-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 SUPERFAMILY SSF51569 3 276 5.13E-67 T 29-03-2018 CKQ55_RS25040 eafeb4a70265b65beae56e52717209f9 338 Pfam PF00682 HMGL-like 6 262 1.4E-73 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 Pfam PF13091 PLD-like domain 257 394 1.1E-21 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 Gene3D G3DSA:3.30.870.10 250 418 1.3E-17 T 29-03-2018 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 PIRSF PIRSF000850 1 451 4.2E-259 T 29-03-2018 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 SMART SM00155 352 379 1.1E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 SMART SM00155 133 159 0.012 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 SUPERFAMILY SSF56024 253 393 2.45E-18 T 29-03-2018 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 SUPERFAMILY SSF56024 9 215 7.59E-27 T 29-03-2018 CKQ55_RS19865 d9bf41da910d0e51784874fc5e9fae08 451 Gene3D G3DSA:3.30.870.10 14 231 1.3E-17 T 29-03-2018 CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 Gene3D G3DSA:3.40.50.300 1 323 5.4E-78 T 29-03-2018 CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 295 2.3E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 SUPERFAMILY SSF52540 3 250 6.07E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 315 1.1E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 SMART SM00382 29 237 1.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS22505 af5b6f3bc902083654bea0508eac7109 324 Pfam PF00005 ABC transporter 20 179 1.0E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 6.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 6.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 6.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 Gene3D G3DSA:3.40.50.720 1 45 9.7E-7 T 29-03-2018 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 Gene3D G3DSA:3.40.50.720 46 251 3.3E-55 T 29-03-2018 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 8.7E-67 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 8.7E-67 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 227 246 8.7E-67 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 201 220 8.7E-67 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 77 94 8.7E-67 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 97 117 8.7E-67 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 248 1.3E-50 T 29-03-2018 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 SUPERFAMILY SSF51735 5 249 6.99E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 250 8.7E-106 T 29-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CKQ55_RS04420 cd4d0e17fabb81641061db8bbec00adf 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 180 0.0017 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 7.3E-80 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82693 146 191 1.09E-21 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82693 277 333 1.09E-21 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82866 801 1024 1.44E-45 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.669 T 29-03-2018 IPR022831 Multidrug resistance protein MdtB CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82693 565 660 1.29E-17 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Gene3D G3DSA:3.30.70.1430 567 666 8.9E-16 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82693 49 138 1.44E-23 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Gene3D G3DSA:3.30.2090.10 190 276 9.0E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Gene3D G3DSA:3.30.2090.10 717 803 2.3E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82866 299 498 5.89E-45 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Gene3D G3DSA:3.30.70.1430 49 150 2.0E-24 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Gene3D G3DSA:1.20.1640.10 824 1025 4.6E-36 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 Gene3D G3DSA:1.20.1640.10 277 501 8.5E-44 T 29-03-2018 CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82714 192 275 2.62E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22440 cb0e6fcaafb9eed6e606aef06df69d3f 1040 SUPERFAMILY SSF82714 719 800 1.03E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Gene3D G3DSA:2.40.50.140 49 116 6.0E-32 T 29-03-2018 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 SMART SM00382 170 355 5.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Gene3D G3DSA:1.10.720.10 1 43 4.6E-13 T 29-03-2018 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 SUPERFAMILY SSF68912 1 46 5.49E-12 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 SMART SM00959 5 47 2.8E-17 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.9E-16 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 SMART SM00357 52 118 9.6E-19 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.853 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 9.5E-223 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Gene3D G3DSA:3.40.50.300 129 419 5.9E-58 T 29-03-2018 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS11995 e350b95a8abdb5805e0e2d553c848264 419 SUPERFAMILY SSF52540 90 371 1.22E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15845 ec4c4063715b0be350a14f2d4ea37d0a 290 Pfam PF00480 ROK family 4 287 1.5E-80 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS15845 ec4c4063715b0be350a14f2d4ea37d0a 290 Gene3D G3DSA:3.30.420.40 1 114 3.6E-21 T 29-03-2018 CKQ55_RS15845 ec4c4063715b0be350a14f2d4ea37d0a 290 SUPERFAMILY SSF53067 1 287 1.69E-51 T 29-03-2018 CKQ55_RS15845 ec4c4063715b0be350a14f2d4ea37d0a 290 Gene3D G3DSA:3.30.420.40 115 289 2.9E-45 T 29-03-2018 CKQ55_RS15845 ec4c4063715b0be350a14f2d4ea37d0a 290 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 45.898 T 29-03-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 CKQ55_RS15845 ec4c4063715b0be350a14f2d4ea37d0a 290 ProSitePatterns PS01125 ROK family signature. 129 156 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Gene3D G3DSA:1.10.150.20 174 245 5.9E-17 T 29-03-2018 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Gene3D G3DSA:3.30.1490.100 246 361 1.1E-22 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Pfam PF11798 IMS family HHH motif 168 199 2.4E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Pfam PF13438 Domain of unknown function (DUF4113) 370 419 1.4E-17 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 SUPERFAMILY SSF56672 1 236 1.6E-66 T 29-03-2018 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Pfam PF00817 impB/mucB/samB family 5 150 4.3E-34 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 350 1.4E-13 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Gene3D G3DSA:3.30.70.270 116 173 9.3E-10 T 29-03-2018 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 Gene3D G3DSA:3.30.70.270 37 115 2.9E-15 T 29-03-2018 CKQ55_RS28720 946b99a3f724185c0c3a7342e426bb69 421 SUPERFAMILY SSF100879 248 344 9.16E-6 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 SUPERFAMILY SSF141868 400 636 8.76E-93 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 Gene3D G3DSA:3.30.70.270 215 385 9.1E-49 T 29-03-2018 CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 Pfam PF00563 EAL domain 401 632 1.9E-78 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 379 6.5E-39 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 384 4.8E-37 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 SMART SM00052 395 637 6.3E-113 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 Gene3D G3DSA:3.20.20.450 386 640 4.9E-100 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 SMART SM00267 215 385 2.2E-48 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS23000 3446f5b2259ca60a7b8396dc3aa7ccdf 641 SUPERFAMILY SSF55073 231 387 3.22E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 Gene3D G3DSA:2.60.120.10 16 218 3.1E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 SUPERFAMILY SSF46689 160 211 7.89E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 SUPERFAMILY SSF46689 213 264 7.62E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 Pfam PF12833 Helix-turn-helix domain 183 262 8.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 SUPERFAMILY SSF51011 622 765 2.12E-6 T 29-03-2018 CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 Gene3D G3DSA:2.60.40.1500 626 767 1.1E-18 T 29-03-2018 CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 SUPERFAMILY SSF51445 327 634 1.43E-16 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 Gene3D G3DSA:1.10.10.60 219 267 3.2E-12 T 29-03-2018 CKQ55_RS29340 f81c09827094d98250bc4097f2c204de 768 SMART SM00342 177 260 2.2E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 SMART SM00563 77 194 3.9E-10 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 Pfam PF01553 Acyltransferase 65 191 6.6E-12 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 Pfam PF13444 Acetyltransferase (GNAT) domain 322 422 6.6E-24 T 29-03-2018 CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 SUPERFAMILY SSF55729 308 481 1.32E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 Gene3D G3DSA:3.40.630.30 301 486 1.3E-24 T 29-03-2018 CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 SUPERFAMILY SSF69593 57 258 6.28E-15 T 29-03-2018 CKQ55_RS06655 90d502629b5d9404334be11436a69e9b 572 Gene3D G3DSA:3.40.1130.10 19 278 4.8E-34 T 29-03-2018 CKQ55_RS23570 4981b45da87d97378828bcc70b101f37 326 Gene3D G3DSA:3.40.50.2300 21 145 3.2E-12 T 29-03-2018 CKQ55_RS23570 4981b45da87d97378828bcc70b101f37 326 SUPERFAMILY SSF53822 26 324 7.74E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS23570 4981b45da87d97378828bcc70b101f37 326 PIRSF PIRSF002816 1 326 3.2E-153 T 29-03-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 CKQ55_RS23570 4981b45da87d97378828bcc70b101f37 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 25 319 4.7E-89 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS23570 4981b45da87d97378828bcc70b101f37 326 Gene3D G3DSA:3.40.50.2300 146 293 5.1E-17 T 29-03-2018 CKQ55_RS30040 9946cc836562d58d09f829e9bc65c694 317 Pfam PF01032 FecCD transport family 12 315 1.4E-90 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS30040 9946cc836562d58d09f829e9bc65c694 317 Gene3D G3DSA:1.10.3470.10 2 317 2.7E-69 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS30040 9946cc836562d58d09f829e9bc65c694 317 SUPERFAMILY SSF81345 5 315 7.19E-79 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS27400 1f403f76f4950355ddc9fe1681d49866 231 Gene3D G3DSA:1.20.910.10 4 229 1.0E-59 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CKQ55_RS27400 1f403f76f4950355ddc9fe1681d49866 231 Pfam PF03070 TENA/THI-4/PQQC family 17 224 8.0E-46 T 29-03-2018 IPR004305 Thiaminase-2/PQQC CKQ55_RS27400 1f403f76f4950355ddc9fe1681d49866 231 SUPERFAMILY SSF48613 4 222 1.29E-66 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 Gene3D G3DSA:1.20.200.10 139 417 1.7E-88 T 29-03-2018 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 SUPERFAMILY SSF48557 5 459 8.8E-159 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 9.0E-249 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 9.2E-5 T 29-03-2018 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 9.2E-5 T 29-03-2018 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 92.113 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 Pfam PF00206 Lyase 12 342 2.0E-122 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 Gene3D G3DSA:1.10.40.30 418 462 8.0E-26 T 29-03-2018 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 5.4E-34 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 5.4E-34 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.4E-34 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 5.4E-34 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 Gene3D G3DSA:1.10.275.10 2 138 9.4E-61 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS25830 61bc9cc8bf570aa7e7dc8dc68128cc86 466 Pfam PF10415 Fumarase C C-terminus 408 461 1.7E-25 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 Pfam PF00005 ABC transporter 272 426 2.9E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 Pfam PF00005 ABC transporter 21 172 6.2E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 Gene3D G3DSA:3.40.50.300 255 498 7.9E-33 T 29-03-2018 CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 SUPERFAMILY SSF52540 6 232 2.19E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 SMART SM00382 30 220 2.8E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 SMART SM00382 281 482 8.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 Gene3D G3DSA:3.40.50.300 3 246 6.5E-49 T 29-03-2018 CKQ55_RS04380 9a4b8eec72cafa1e327e0efb2f2b06e2 500 SUPERFAMILY SSF52540 270 487 1.16E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 Pfam PF14310 Fibronectin type III-like domain 319 394 3.2E-18 T 29-03-2018 IPR026891 Fibronectin type III-like domain CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 498 789 3.7E-59 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 Gene3D G3DSA:3.40.50.1700 11 285 5.9E-48 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 SUPERFAMILY SSF52279 126 288 9.81E-27 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 SUPERFAMILY SSF52279 26 94 9.81E-27 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 26 264 4.1E-28 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 SUPERFAMILY SSF51445 489 800 5.58E-76 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 Gene3D G3DSA:2.60.40.10 286 401 8.4E-26 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 Gene3D G3DSA:3.20.20.300 486 840 1.6E-84 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 PRINTS PR00133 Glycosyl hydrolase family 3 signature 636 652 8.5E-28 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 PRINTS PR00133 Glycosyl hydrolase family 3 signature 605 621 8.5E-28 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 PRINTS PR00133 Glycosyl hydrolase family 3 signature 533 549 8.5E-28 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 PRINTS PR00133 Glycosyl hydrolase family 3 signature 559 578 8.5E-28 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 PRINTS PR00133 Glycosyl hydrolase family 3 signature 706 724 8.5E-28 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 SMART SM01217 319 395 8.8E-24 T 29-03-2018 IPR026891 Fibronectin type III-like domain CKQ55_RS24160 bb5a3b4ba2cd4b37bcb571add1299f14 926 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 706 723 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 PIRSF PIRSF000429 1 401 1.0E-135 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 SUPERFAMILY SSF53901 3 271 2.65E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 1.2E-215 T 29-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 SUPERFAMILY SSF53901 277 400 5.11E-46 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 2.6E-46 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 4.7E-74 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 Gene3D G3DSA:3.40.47.10 275 398 3.3E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 4.0E-137 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 Gene3D G3DSA:3.40.47.10 1 274 1.1E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS28300 8ab7ff38375899746e392c30e4bf7297 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CKQ55_RS19710 31e12e54f24d16dda1b522783611b143 292 Pfam PF01513 ATP-NAD kinase 8 271 3.9E-75 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CKQ55_RS19710 31e12e54f24d16dda1b522783611b143 292 Gene3D G3DSA:2.60.200.30 142 264 9.0E-41 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CKQ55_RS19710 31e12e54f24d16dda1b522783611b143 292 SUPERFAMILY SSF111331 7 289 1.96E-91 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CKQ55_RS19710 31e12e54f24d16dda1b522783611b143 292 Gene3D G3DSA:3.40.50.10330 1 141 4.9E-38 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CKQ55_RS19710 31e12e54f24d16dda1b522783611b143 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.186 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CKQ55_RS26205 14189b3b31aed906e6b1934927c1b201 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 1.6E-41 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 CKQ55_RS26205 14189b3b31aed906e6b1934927c1b201 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 3.0E-50 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 CKQ55_RS26205 14189b3b31aed906e6b1934927c1b201 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 26.957 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 CKQ55_RS23270 fb116190473c0a4c7a3c590461dab08a 85 Pfam PF11183 Polymyxin resistance protein PmrD 1 78 1.4E-23 T 29-03-2018 CKQ55_RS23270 fb116190473c0a4c7a3c590461dab08a 85 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 76 1.0E-7 T 29-03-2018 IPR020146 Signal transduction protein PmrD CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 SUPERFAMILY SSF53448 108 405 1.13E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 487 511 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 4.8E-57 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 Pfam PF07238 PilZ domain 550 645 1.1E-6 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 SUPERFAMILY SSF141371 552 642 2.94E-7 T 29-03-2018 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 Pfam PF03552 Cellulose synthase 302 432 5.3E-7 T 29-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 Gene3D G3DSA:3.90.550.10 127 364 2.7E-48 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 2 675 6.4E-256 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 Gene3D G3DSA:2.40.10.220 544 660 3.6E-11 T 29-03-2018 CKQ55_RS14205 5a6be280a90ab425f10aa1f1d8e1f286 703 Pfam PF00535 Glycosyl transferase family 2 130 300 3.2E-32 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 416 3.0E-13 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.4E-12 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 SUPERFAMILY SSF55124 13 142 5.07E-25 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.583 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Gene3D G3DSA:3.30.413.10 425 560 3.8E-25 T 29-03-2018 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 549 0.07 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 1.5E-47 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 2.1E-299 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 SUPERFAMILY SSF56014 428 559 6.15E-35 T 29-03-2018 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 SUPERFAMILY SSF56014 150 344 2.88E-61 T 29-03-2018 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 Gene3D G3DSA:3.30.413.10 141 345 6.4E-46 T 29-03-2018 CKQ55_RS18630 db49b48eac8f446569837ee529076730 570 SUPERFAMILY SSF55124 346 422 2.45E-21 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS26840 68c2f0356f8539b9d65cb182704cf8ed 317 Gene3D G3DSA:3.40.50.2300 154 316 1.7E-36 T 29-03-2018 CKQ55_RS26840 68c2f0356f8539b9d65cb182704cf8ed 317 Pfam PF13407 Periplasmic binding protein domain 40 292 3.1E-58 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS26840 68c2f0356f8539b9d65cb182704cf8ed 317 Gene3D G3DSA:3.40.50.2300 24 153 2.6E-26 T 29-03-2018 CKQ55_RS26840 68c2f0356f8539b9d65cb182704cf8ed 317 SUPERFAMILY SSF53822 39 314 1.99E-76 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS18410 756a94d0d872f46cf0cf897d76497a6f 365 SMART SM00925 125 257 1.6E-66 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CKQ55_RS18410 756a94d0d872f46cf0cf897d76497a6f 365 SUPERFAMILY SSF50685 25 353 6.98E-114 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CKQ55_RS18410 756a94d0d872f46cf0cf897d76497a6f 365 Pfam PF03562 MltA specific insert domain 94 257 1.4E-39 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CKQ55_RS18410 756a94d0d872f46cf0cf897d76497a6f 365 PIRSF PIRSF019422 1 365 1.7E-89 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CKQ55_RS18410 756a94d0d872f46cf0cf897d76497a6f 365 Pfam PF06725 3D domain 277 354 4.1E-24 T 29-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CKQ55_RS18410 756a94d0d872f46cf0cf897d76497a6f 365 Gene3D G3DSA:2.40.240.50 58 259 1.8E-62 T 29-03-2018 CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 160 1.4E-17 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.436 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 SUPERFAMILY SSF46565 1 75 2.09E-18 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 Gene3D G3DSA:1.10.287.110 1 79 1.3E-11 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 SMART SM00271 1 66 3.4E-9 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 SUPERFAMILY SSF47144 77 170 3.79E-25 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 Gene3D G3DSA:1.20.1280.20 81 170 2.7E-24 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS20135 aa94a770114c49ae5e4f1a70194014b7 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 7.7E-63 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 1.0E-165 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.742 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Gene3D G3DSA:2.170.220.10 181 248 7.9E-16 T 29-03-2018 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 SUPERFAMILY SSF50249 570 676 6.37E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 3.5E-205 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Gene3D G3DSA:2.20.28.20 142 175 2.0E-15 T 29-03-2018 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Gene3D G3DSA:3.40.50.620 4 82 1.4E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Gene3D G3DSA:3.40.50.620 249 372 2.7E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Gene3D G3DSA:2.40.50.140 567 677 9.5E-24 T 29-03-2018 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 SUPERFAMILY SSF47323 391 548 3.55E-46 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.9E-46 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Gene3D G3DSA:1.10.730.10 374 537 4.2E-36 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 7.1E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 7.1E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 7.1E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 7.1E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 7.1E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 7.1E-26 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 Pfam PF01588 Putative tRNA binding domain 581 674 8.3E-21 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 SUPERFAMILY SSF52374 176 388 3.84E-106 T 29-03-2018 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 SUPERFAMILY SSF52374 6 141 3.84E-106 T 29-03-2018 CKQ55_RS21965 5b0ff449221650d0f8f464d83edd0518 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Pfam PF00912 Transglycosylase 207 381 1.8E-54 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 69 795 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Gene3D G3DSA:1.20.5.100 58 96 1.8E-16 T 29-03-2018 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Gene3D G3DSA:3.30.2060.10 113 199 3.3E-28 T 29-03-2018 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Gene3D G3DSA:3.40.710.10 405 839 7.0E-99 T 29-03-2018 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 SUPERFAMILY SSF53955 198 404 2.62E-65 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 PIRSF PIRSF002799 20 848 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 474 714 4.7E-26 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 SUPERFAMILY SSF56601 363 385 5.45E-106 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 SUPERFAMILY SSF56601 413 790 5.45E-106 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Gene3D G3DSA:1.10.3810.10 200 398 5.1E-62 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 80 9.2E-30 T 29-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CKQ55_RS07720 bb9019f25709122a3817867a7f2e9ce7 851 Pfam PF14814 Bifunctional transglycosylase second domain 114 198 9.7E-29 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82693 575 678 1.31E-21 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82866 813 1037 1.7E-42 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82714 185 275 5.23E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82866 299 499 9.29E-51 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:1.20.1640.10 278 501 5.1E-51 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:1.20.1640.10 853 1038 4.0E-38 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82693 277 333 6.54E-27 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82693 139 184 6.54E-27 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:3.30.70.1320 774 852 2.5E-7 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.1E-91 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82693 41 134 1.18E-26 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:3.30.70.1430 578 678 2.1E-15 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:3.30.2090.10 183 277 7.3E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1046 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 SUPERFAMILY SSF82714 729 815 3.92E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:3.30.70.1440 679 773 9.6E-20 T 29-03-2018 CKQ55_RS28460 91bea4789971af1710ec998bb7604c7b 1050 Gene3D G3DSA:3.30.70.1430 40 142 1.0E-26 T 29-03-2018 CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 Gene3D G3DSA:3.20.20.120 118 373 3.4E-58 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 SUPERFAMILY SSF54826 1 112 2.4E-34 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 SUPERFAMILY SSF51604 98 388 2.23E-80 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 Pfam PF13378 Enolase C-terminal domain-like 142 379 3.8E-43 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 SMART SM00922 128 259 2.7E-16 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 110 8.3E-35 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 Gene3D G3DSA:3.30.390.10 3 117 1.9E-35 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS26215 ab7f697a243e4e4a7181de14cbf808f6 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 SUPERFAMILY SSF52540 3 189 7.91E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.301 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 Gene3D G3DSA:3.40.50.300 82 188 5.6E-36 T 29-03-2018 CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 Gene3D G3DSA:3.40.50.300 3 48 7.7E-4 T 29-03-2018 CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 Gene3D G3DSA:3.30.63.10 49 81 7.6E-27 T 29-03-2018 CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 SMART SM00072 3 187 6.3E-84 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 Pfam PF00625 Guanylate kinase 5 185 9.9E-69 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CKQ55_RS13655 9f26dfc868afa9514672ce91d63569f1 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 5.2E-75 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CKQ55_RS01215 c05bf97307116d2d1c5193814734f283 765 Pfam PF01228 Glycine radical 646 747 2.8E-25 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CKQ55_RS01215 c05bf97307116d2d1c5193814734f283 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CKQ55_RS01215 c05bf97307116d2d1c5193814734f283 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 3.2E-201 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CKQ55_RS01215 c05bf97307116d2d1c5193814734f283 765 SUPERFAMILY SSF51998 1 764 5.19E-216 T 29-03-2018 CKQ55_RS01215 c05bf97307116d2d1c5193814734f283 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CKQ55_RS01215 c05bf97307116d2d1c5193814734f283 765 Gene3D G3DSA:3.20.70.20 1 765 2.5E-271 T 29-03-2018 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 2.6E-18 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 SUPERFAMILY SSF54680 337 439 4.32E-31 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 9.3E-235 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 9.3E-24 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 SMART SM00941 350 424 7.7E-29 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 7.8E-167 T 29-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 PIRSF PIRSF000478 1 439 1.5E-151 T 29-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Gene3D G3DSA:1.20.970.10 3 67 8.7E-21 T 29-03-2018 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 46.995 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 29-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Gene3D G3DSA:3.90.1170.30 343 429 1.5E-27 T 29-03-2018 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 8.7E-53 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 SUPERFAMILY SSF52418 74 334 5.63E-88 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 Gene3D G3DSA:3.40.1030.10 69 342 7.4E-83 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08785 77a548390596833791a869ec4c5274f4 440 SUPERFAMILY SSF47648 3 70 3.14E-21 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 SUPERFAMILY SSF46689 80 131 1.05E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 Gene3D G3DSA:1.10.10.60 81 133 1.2E-11 T 29-03-2018 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 SUPERFAMILY SSF46689 28 78 4.07E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 78 123 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 Gene3D G3DSA:1.10.10.60 4 80 7.9E-15 T 29-03-2018 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 SMART SM00342 44 127 2.6E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28900 836aab181a05409dfc52eab57592e5af 136 Pfam PF12833 Helix-turn-helix domain 50 129 1.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS18205 a9eb974bb2811014f3afa8e049017ccf 463 Gene3D G3DSA:3.40.605.10 31 253 3.1E-35 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS18205 a9eb974bb2811014f3afa8e049017ccf 463 PIRSF PIRSF036410 1 463 4.0E-217 T 29-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CKQ55_RS18205 a9eb974bb2811014f3afa8e049017ccf 463 Gene3D G3DSA:3.40.309.10 254 421 1.2E-24 T 29-03-2018 CKQ55_RS18205 a9eb974bb2811014f3afa8e049017ccf 463 Pfam PF00171 Aldehyde dehydrogenase family 35 417 1.1E-30 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS18205 a9eb974bb2811014f3afa8e049017ccf 463 SUPERFAMILY SSF53720 34 454 1.57E-62 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01365 60778816e8c8951d9ed50d5807bb35f0 460 Pfam PF00860 Permease family 23 408 8.3E-85 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS01365 60778816e8c8951d9ed50d5807bb35f0 460 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS01365 60778816e8c8951d9ed50d5807bb35f0 460 TIGRFAM TIGR03173 pbuX: xanthine permease 26 439 7.9E-132 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CKQ55_RS01365 60778816e8c8951d9ed50d5807bb35f0 460 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 438 9.0E-108 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SUPERFAMILY SSF55785 142 267 5.06E-20 T 29-03-2018 IPR000014 PAS domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Pfam PF00072 Response regulator receiver domain 529 640 1.0E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.5E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 4.5E-15 T 29-03-2018 IPR000014 PAS domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Pfam PF01627 Hpt domain 687 761 1.2E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Gene3D G3DSA:3.30.565.10 342 507 3.5E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SMART SM00091 155 221 1.5E-6 T 29-03-2018 IPR000014 PAS domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Gene3D G3DSA:1.10.287.970 3 88 8.4E-40 T 29-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SMART SM00388 282 347 6.3E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SUPERFAMILY SSF47384 269 347 5.69E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Gene3D G3DSA:1.10.287.130 278 341 2.5E-17 T 29-03-2018 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Gene3D G3DSA:3.30.450.20 140 277 3.3E-23 T 29-03-2018 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 PIRSF PIRSF003182 1 779 0.0 T 29-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SUPERFAMILY SSF55874 336 504 4.71E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SMART SM00448 527 640 1.5E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Gene3D G3DSA:3.40.50.2300 514 645 9.2E-29 T 29-03-2018 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SUPERFAMILY SSF47226 663 773 6.02E-27 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Pfam PF00989 PAS fold 156 266 3.1E-17 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 4.8E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SMART SM00387 394 508 3.7E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SUPERFAMILY SSF52172 527 648 3.42E-27 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 5.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 5.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 5.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 5.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 Gene3D G3DSA:1.20.120.160 646 764 1.5E-15 T 29-03-2018 CKQ55_RS15880 1bf1ebb11d9fe437219ebd7d1cf7acf1 779 SMART SM00073 676 773 5.8E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 SMART SM00346 1 87 0.0052 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 Pfam PF09339 IclR helix-turn-helix domain 9 56 4.5E-9 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 SUPERFAMILY SSF55781 83 247 1.57E-38 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 SUPERFAMILY SSF46785 8 75 6.4E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 Gene3D G3DSA:1.10.10.10 5 67 1.6E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 Pfam PF01614 Bacterial transcriptional regulator 121 242 7.3E-23 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS14845 d6009fb810b5b9f727101909f24cb17f 255 Gene3D G3DSA:3.30.450.40 82 253 3.9E-39 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS18420 703b15617587d3f85df4a27e5a70ae2d 145 SUPERFAMILY SSF82649 3 141 1.15E-41 T 29-03-2018 CKQ55_RS18420 703b15617587d3f85df4a27e5a70ae2d 145 Pfam PF02657 Fe-S metabolism associated domain 18 135 4.8E-36 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CKQ55_RS18420 703b15617587d3f85df4a27e5a70ae2d 145 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 140 4.4E-67 T 29-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CKQ55_RS18420 703b15617587d3f85df4a27e5a70ae2d 145 Gene3D G3DSA:3.90.1010.10 1 143 2.6E-43 T 29-03-2018 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.0E-57 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 147 1.0E-69 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 SUPERFAMILY SSF54611 3 141 6.54E-54 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.356 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS13835 4bad5a275275dbf6c498b23bd50de158 155 Gene3D G3DSA:3.10.420.10 1 153 1.4E-56 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 47.51 T 29-03-2018 IPR023721 Multidrug resistance protein MdtD, putative CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.0E-9 T 29-03-2018 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 3.0E-9 T 29-03-2018 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.0E-9 T 29-03-2018 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.0E-9 T 29-03-2018 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.0E-9 T 29-03-2018 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 428 3.0E-70 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 SUPERFAMILY SSF103473 244 452 9.02E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 SUPERFAMILY SSF103473 7 194 9.02E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 Pfam PF07690 Major Facilitator Superfamily 15 405 1.5E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 Gene3D G3DSA:1.20.1250.20 255 470 6.1E-26 T 29-03-2018 CKQ55_RS22430 fcf84a793f9fa1d40f2547509950a910 471 Gene3D G3DSA:1.20.1250.20 4 196 2.0E-32 T 29-03-2018 CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 Gene3D G3DSA:1.10.10.10 8 63 6.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 SUPERFAMILY SSF54909 74 157 4.29E-22 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 29-03-2018 CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.2E-24 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 SMART SM00344 12 121 3.6E-55 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 Gene3D G3DSA:3.30.70.920 64 158 2.0E-27 T 29-03-2018 CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS02220 bea9bb00dab424e8c87ceec721a586ac 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS28150 3b82544c85164650233d698edd11e1e4 206 Gene3D G3DSA:2.60.130.10 2 206 1.4E-55 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CKQ55_RS28150 3b82544c85164650233d698edd11e1e4 206 Pfam PF00775 Dioxygenase 42 196 2.2E-18 T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CKQ55_RS28150 3b82544c85164650233d698edd11e1e4 206 SUPERFAMILY SSF49482 4 206 7.59E-65 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CKQ55_RS28150 3b82544c85164650233d698edd11e1e4 206 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 51 79 - T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CKQ55_RS28150 3b82544c85164650233d698edd11e1e4 206 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 206 5.0E-80 T 29-03-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 SUPERFAMILY SSF48498 85 200 1.29E-11 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 1.0E-49 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.1E-20 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.1E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.1E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 SUPERFAMILY SSF46689 1 67 8.21E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS05950 30003b5cd639a7d9b35b9b9b1797e163 216 Gene3D G3DSA:1.10.357.10 1 215 9.2E-40 T 29-03-2018 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 Gene3D G3DSA:3.40.190.10 178 267 2.7E-12 T 29-03-2018 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 Pfam PF03466 LysR substrate binding domain 91 290 1.2E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 Gene3D G3DSA:1.10.10.10 1 83 3.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.8E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 SUPERFAMILY SSF53850 91 297 1.09E-30 T 29-03-2018 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 Gene3D G3DSA:3.40.190.10 88 177 6.5E-15 T 29-03-2018 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29150 8e1dc4b8edc7508f6d1139a04137a1dc 307 SUPERFAMILY SSF46785 1 83 9.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 410 472 8.1E-23 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 Pfam PF01464 Transglycosylase SLT domain 488 596 1.7E-33 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 SUPERFAMILY SSF53955 479 641 3.44E-52 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 SUPERFAMILY SSF48435 28 477 4.71E-132 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 Gene3D G3DSA:1.10.1240.20 405 472 5.2E-18 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 Gene3D G3DSA:1.25.20.10 28 390 2.7E-49 T 29-03-2018 CKQ55_RS08735 9042a86d24e159626f6489e864073407 645 Gene3D G3DSA:1.10.530.10 473 645 3.2E-42 T 29-03-2018 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 SUPERFAMILY SSF52402 253 365 6.7E-8 T 29-03-2018 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Gene3D G3DSA:1.10.287.130 653 724 9.9E-11 T 29-03-2018 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 778 883 2.8E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Gene3D G3DSA:3.40.50.620 227 372 2.6E-13 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Gene3D G3DSA:3.30.450.40 500 652 1.8E-5 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 SMART SM00387 774 884 3.2E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 868 881 4.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 811 825 4.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 839 4.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 862 4.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 2.6E-97 T 29-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 SMART SM00388 663 730 2.5E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Pfam PF13492 GAF domain 530 644 1.6E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 SUPERFAMILY SSF47384 658 731 1.45E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 3.5E-28 T 29-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Gene3D G3DSA:1.20.120.620 401 499 9.6E-26 T 29-03-2018 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 SUPERFAMILY SSF55874 719 886 2.49E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Gene3D G3DSA:3.30.565.10 725 884 1.3E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Gene3D G3DSA:3.40.50.300 21 148 1.2E-22 T 29-03-2018 CKQ55_RS03840 253899218dace3b9ba2ad008d1d8f6da 895 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 9.7E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS18060 e671cf76bfde9daa41d2c130e6082f46 346 Gene3D G3DSA:3.20.20.100 1 346 8.1E-94 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS18060 e671cf76bfde9daa41d2c130e6082f46 346 Pfam PF00248 Aldo/keto reductase family 16 337 1.9E-72 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS18060 e671cf76bfde9daa41d2c130e6082f46 346 SUPERFAMILY SSF51430 1 344 9.3E-106 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS18060 e671cf76bfde9daa41d2c130e6082f46 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.3E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS18060 e671cf76bfde9daa41d2c130e6082f46 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.3E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 SUPERFAMILY SSF46689 137 178 2.48E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 SMART SM00857 3 135 2.8E-52 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 SUPERFAMILY SSF53041 1 135 1.06E-42 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 Pfam PF00239 Resolvase, N terminal domain 4 135 4.4E-40 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 Gene3D G3DSA:1.20.5.40 104 124 4.6E-15 T 29-03-2018 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 Gene3D G3DSA:1.10.10.60 125 179 5.7E-8 T 29-03-2018 CKQ55_RS17040 95917451bd6b0cd67a49ae9a5a55b37c 183 Gene3D G3DSA:3.40.50.1390 1 103 2.8E-32 T 29-03-2018 CKQ55_RS16195 e272f7d650eb3811757bb1e95b102633 128 SUPERFAMILY SSF52980 16 123 5.36E-24 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS16195 e272f7d650eb3811757bb1e95b102633 128 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 15 126 3.6E-53 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CKQ55_RS16195 e272f7d650eb3811757bb1e95b102633 128 Hamap MF_00048 UPF0102 protein YraN [yraN]. 15 127 24.689 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CKQ55_RS16195 e272f7d650eb3811757bb1e95b102633 128 Pfam PF02021 Uncharacterised protein family UPF0102 23 113 4.0E-27 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CKQ55_RS16195 e272f7d650eb3811757bb1e95b102633 128 Gene3D G3DSA:3.40.1350.10 21 128 2.0E-36 T 29-03-2018 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.738 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Pfam PF00817 impB/mucB/samB family 7 154 9.8E-48 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 341 1.8E-9 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 SUPERFAMILY SSF100879 241 349 2.75E-26 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Gene3D G3DSA:3.30.70.270 41 116 9.0E-26 T 29-03-2018 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Gene3D G3DSA:3.30.70.270 117 170 1.5E-20 T 29-03-2018 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Gene3D G3DSA:3.30.1490.100 243 351 1.5E-28 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Gene3D G3DSA:1.10.150.20 171 242 3.7E-21 T 29-03-2018 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 SUPERFAMILY SSF56672 1 234 6.49E-94 T 29-03-2018 CKQ55_RS07280 3bf5c8ca83550528b13ce0e718b246bb 351 Pfam PF11798 IMS family HHH motif 169 197 5.6E-7 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 4.0E-48 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 Gene3D G3DSA:3.10.129.10 2 134 2.0E-34 T 29-03-2018 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 4.2E-50 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 PIRSF PIRSF003230 1 134 5.6E-49 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 Pfam PF03061 Thioesterase superfamily 20 103 8.0E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 29-03-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CKQ55_RS03595 6c8840bd1a53f9fe689b19bea2dde9b1 134 SUPERFAMILY SSF54637 4 133 1.47E-37 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS30195 360a075640d88f11a92dc760189c7b8a 334 Pfam PF01548 Transposase 7 147 1.0E-18 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CKQ55_RS30195 360a075640d88f11a92dc760189c7b8a 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 1.0E-19 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CKQ55_RS24075 ced103de767611809143966534863bb9 232 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 129 228 1.9E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CKQ55_RS24075 ced103de767611809143966534863bb9 232 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 1.3E-33 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CKQ55_RS24075 ced103de767611809143966534863bb9 232 SUPERFAMILY SSF63848 126 231 9.02E-31 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CKQ55_RS24075 ced103de767611809143966534863bb9 232 Gene3D G3DSA:2.160.20.70 112 232 4.0E-30 T 29-03-2018 CKQ55_RS24075 ced103de767611809143966534863bb9 232 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 232 29.003 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CKQ55_RS24075 ced103de767611809143966534863bb9 232 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 231 6.3E-70 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 3.3E-29 T 29-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 473 63.697 T 29-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 SUPERFAMILY SSF53335 8 310 2.07E-66 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 Gene3D G3DSA:3.40.50.150 101 317 1.6E-61 T 29-03-2018 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 3.3E-108 T 29-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 Gene3D G3DSA:3.30.70.1170 29 100 8.1E-21 T 29-03-2018 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 Pfam PF01189 16S rRNA methyltransferase RsmB/F 119 309 1.1E-47 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 1.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 1.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 1.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 1.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 1.0E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS23850 eda7c5a72dcef26719cc56bcb8eea28a 477 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 4.7E-11 T 29-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS20150 b5bb5c562dc505ceed4dca1c6c9253c0 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.2E-32 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CKQ55_RS20150 b5bb5c562dc505ceed4dca1c6c9253c0 66 Gene3D G3DSA:1.10.10.600 2 64 2.9E-34 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CKQ55_RS20150 b5bb5c562dc505ceed4dca1c6c9253c0 66 SUPERFAMILY SSF140319 3 64 4.32E-27 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CKQ55_RS20150 b5bb5c562dc505ceed4dca1c6c9253c0 66 PIRSF PIRSF039003 3 66 8.1E-33 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CKQ55_RS20150 b5bb5c562dc505ceed4dca1c6c9253c0 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 2.1E-32 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 SUPERFAMILY SSF46689 221 272 6.27E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 SUPERFAMILY SSF46689 170 218 4.42E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 2.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 2.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 Gene3D G3DSA:2.60.120.10 44 222 1.4E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 SMART SM00342 185 268 3.8E-32 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 Gene3D G3DSA:1.10.10.60 223 277 9.7E-18 T 29-03-2018 CKQ55_RS01235 c739acf97486006f9b3f3ca8e3c95c19 277 Pfam PF12833 Helix-turn-helix domain 191 269 8.9E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS30365 f4f4d105791313392f2db4574584db89 326 Gene3D G3DSA:3.30.420.10 132 315 5.3E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS30365 f4f4d105791313392f2db4574584db89 326 SUPERFAMILY SSF53098 136 307 4.3E-35 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS30365 f4f4d105791313392f2db4574584db89 326 Pfam PF00665 Integrase core domain 139 260 6.9E-22 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CKQ55_RS30365 f4f4d105791313392f2db4574584db89 326 Gene3D G3DSA:1.10.260.40 13 78 5.3E-6 T 29-03-2018 CKQ55_RS29315 69751eeb00a6305dfac374afcdf490bf 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.3E-31 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CKQ55_RS29315 69751eeb00a6305dfac374afcdf490bf 74 Pfam PF06667 Phage shock protein B 3 73 4.0E-31 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 SUPERFAMILY SSF46689 214 264 2.69E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 Pfam PF02311 AraC-like ligand binding domain 29 141 4.0E-6 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 SMART SM00342 177 260 4.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 Gene3D G3DSA:1.10.10.60 159 213 8.8E-6 T 29-03-2018 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 SUPERFAMILY SSF51215 20 142 2.62E-13 T 29-03-2018 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 260 4.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 244 4.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 Gene3D G3DSA:1.10.10.60 214 271 5.8E-14 T 29-03-2018 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 Gene3D G3DSA:2.60.120.280 20 154 1.2E-11 T 29-03-2018 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 256 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS13930 904283d45c622d9661c9807742fe8110 271 Pfam PF12833 Helix-turn-helix domain 183 262 4.2E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08290 55ce0a40840243c7ead5a2aa0ec42c9b 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS08290 55ce0a40840243c7ead5a2aa0ec42c9b 233 SUPERFAMILY SSF52540 1 221 4.75E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08290 55ce0a40840243c7ead5a2aa0ec42c9b 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 9.6E-108 T 29-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 CKQ55_RS08290 55ce0a40840243c7ead5a2aa0ec42c9b 233 Gene3D G3DSA:3.40.50.300 1 230 5.6E-58 T 29-03-2018 CKQ55_RS08290 55ce0a40840243c7ead5a2aa0ec42c9b 233 SMART SM00382 24 209 2.2E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS08290 55ce0a40840243c7ead5a2aa0ec42c9b 233 Pfam PF00005 ABC transporter 18 157 8.5E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03925 c45305806e9967b8528def711da53405 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03925 c45305806e9967b8528def711da53405 308 Gene3D G3DSA:1.10.10.10 1 81 2.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03925 c45305806e9967b8528def711da53405 308 SUPERFAMILY SSF53850 87 296 3.8E-32 T 29-03-2018 CKQ55_RS03925 c45305806e9967b8528def711da53405 308 Pfam PF03466 LysR substrate binding domain 86 282 6.1E-32 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS03925 c45305806e9967b8528def711da53405 308 Gene3D G3DSA:3.40.190.10 86 180 2.4E-16 T 29-03-2018 CKQ55_RS03925 c45305806e9967b8528def711da53405 308 SUPERFAMILY SSF46785 1 84 1.63E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03925 c45305806e9967b8528def711da53405 308 Gene3D G3DSA:3.40.190.10 181 261 1.3E-13 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-93 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Gene3D G3DSA:1.20.1640.10 286 508 4.8E-43 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Gene3D G3DSA:3.30.70.1430 38 140 7.5E-24 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82693 565 665 2.35E-23 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82866 296 498 1.02E-45 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Gene3D G3DSA:3.30.2090.10 180 275 8.0E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82693 668 717 2.88E-24 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82693 804 852 2.88E-24 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82693 38 130 5.49E-23 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82714 720 803 1.83E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82866 837 1021 6.41E-41 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Gene3D G3DSA:3.30.70.1430 567 667 3.2E-17 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Gene3D G3DSA:1.20.1640.10 805 1025 8.2E-37 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82714 183 271 1.83E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 Gene3D G3DSA:3.30.70.1440 668 764 1.1E-16 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82693 135 182 2.88E-23 T 29-03-2018 CKQ55_RS01480 1a31331cb3e9bae2d3fe619ecce6e381 1039 SUPERFAMILY SSF82693 274 329 2.88E-23 T 29-03-2018 CKQ55_RS00505 a1cb27d591ed09aff0146b038538d996 158 Pfam PF00293 NUDIX domain 4 116 3.1E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS00505 a1cb27d591ed09aff0146b038538d996 158 Gene3D G3DSA:3.90.79.10 1 147 3.0E-29 T 29-03-2018 CKQ55_RS00505 a1cb27d591ed09aff0146b038538d996 158 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.8E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS00505 a1cb27d591ed09aff0146b038538d996 158 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.8E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS00505 a1cb27d591ed09aff0146b038538d996 158 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS00505 a1cb27d591ed09aff0146b038538d996 158 SUPERFAMILY SSF55811 2 117 1.06E-28 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 441 459 - T 29-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 Gene3D G3DSA:3.40.50.150 87 310 3.0E-57 T 29-03-2018 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 178 190 - T 29-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 Gene3D G3DSA:3.90.120.10 313 447 1.2E-25 T 29-03-2018 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 458 7.6E-114 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 457 2.3E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 280 293 1.4E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 1.4E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 226 240 1.4E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS30320 9296c20d1faa892fdb0627ac9b381240 477 SUPERFAMILY SSF53335 96 460 3.52E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS17320 4fb55f1624fc23bfaac97095b9a30c5a 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 1.4E-44 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CKQ55_RS17320 4fb55f1624fc23bfaac97095b9a30c5a 198 PIRSF PIRSF006806 6 195 2.3E-36 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CKQ55_RS17320 4fb55f1624fc23bfaac97095b9a30c5a 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 1.7E-54 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CKQ55_RS17320 4fb55f1624fc23bfaac97095b9a30c5a 198 Gene3D G3DSA:3.40.50.10420 3 198 7.4E-61 T 29-03-2018 CKQ55_RS17320 4fb55f1624fc23bfaac97095b9a30c5a 198 SUPERFAMILY SSF100950 10 198 9.63E-58 T 29-03-2018 CKQ55_RS27245 ed0040b7f4f0d72ae75bf899e93398e4 504 ProSitePatterns PS00571 Amidases signature. 169 200 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CKQ55_RS27245 ed0040b7f4f0d72ae75bf899e93398e4 504 Pfam PF01425 Amidase 77 488 6.7E-104 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS27245 ed0040b7f4f0d72ae75bf899e93398e4 504 SUPERFAMILY SSF75304 38 503 4.45E-116 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS27245 ed0040b7f4f0d72ae75bf899e93398e4 504 Gene3D G3DSA:3.90.1300.10 73 503 6.7E-120 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 SUPERFAMILY SSF51556 57 329 1.36E-48 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 Gene3D G3DSA:3.20.20.140 68 318 3.0E-32 T 29-03-2018 CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 Pfam PF01979 Amidohydrolase family 53 363 3.4E-10 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 Gene3D G3DSA:2.30.40.10 319 387 0.0046 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 Gene3D G3DSA:2.30.40.10 2 67 1.4E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 SUPERFAMILY SSF51338 3 57 7.56E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS14490 2ebe4d68b916fdc9a338dad1a1713305 387 SUPERFAMILY SSF51338 334 382 7.56E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 SMART SM01134 87 247 6.2E-52 T 29-03-2018 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 Pfam PF00455 DeoR C terminal sensor domain 89 245 1.0E-40 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 SUPERFAMILY SSF46785 5 58 9.34E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 SMART SM00420 6 58 2.9E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 SUPERFAMILY SSF100950 89 246 1.88E-23 T 29-03-2018 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.3E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 Gene3D G3DSA:3.40.50.1360 79 265 1.7E-29 T 29-03-2018 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 Gene3D G3DSA:1.10.10.10 4 64 1.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-10 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17725 e204e843c0f3cafcb67719fd327a1c4f 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-10 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17005 d04351ffaef7a7d292da15f60ca68e6d 380 Pfam PF02661 Fic/DOC family 110 210 2.8E-20 T 29-03-2018 IPR003812 Fido domain CKQ55_RS17005 d04351ffaef7a7d292da15f60ca68e6d 380 Gene3D G3DSA:1.10.10.10 289 357 0.0037 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17005 d04351ffaef7a7d292da15f60ca68e6d 380 SUPERFAMILY SSF140931 87 273 3.53E-35 T 29-03-2018 IPR003812 Fido domain CKQ55_RS17005 d04351ffaef7a7d292da15f60ca68e6d 380 Gene3D G3DSA:1.10.3290.10 22 282 2.9E-49 T 29-03-2018 IPR003812 Fido domain CKQ55_RS09140 3ca634c2e678c15f89823109d4d321c1 456 Gene3D G3DSA:3.40.605.10 1 244 3.5E-66 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09140 3ca634c2e678c15f89823109d4d321c1 456 Pfam PF00171 Aldehyde dehydrogenase family 3 452 6.6E-140 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09140 3ca634c2e678c15f89823109d4d321c1 456 SUPERFAMILY SSF53720 3 454 4.84E-145 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09140 3ca634c2e678c15f89823109d4d321c1 456 Gene3D G3DSA:3.40.309.10 245 438 2.8E-70 T 29-03-2018 CKQ55_RS09140 3ca634c2e678c15f89823109d4d321c1 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09140 3ca634c2e678c15f89823109d4d321c1 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 SUPERFAMILY SSF53041 4 148 1.44E-39 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 Gene3D G3DSA:1.20.5.40 119 146 5.1E-15 T 29-03-2018 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 SUPERFAMILY SSF46689 156 199 6.27E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 SMART SM00857 5 148 5.7E-52 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 Gene3D G3DSA:3.40.50.1390 1 118 1.7E-34 T 29-03-2018 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 Gene3D G3DSA:1.10.10.60 148 198 2.1E-10 T 29-03-2018 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 Pfam PF13384 Homeodomain-like domain 166 198 1.3E-5 T 29-03-2018 CKQ55_RS30235 6fed3e749ad0da9877d1682752df1832 201 Pfam PF00239 Resolvase, N terminal domain 5 147 5.6E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS00715 be6fe45722674a44f8f6563d4a4992de 124 Pfam PF07233 Protein of unknown function (DUF1425) 33 123 3.8E-24 T 29-03-2018 IPR010824 Protein of unknown function DUF1425 CKQ55_RS00230 d2632293f4a5cbe9f213c95aae8cc19e 236 SUPERFAMILY SSF48726 156 231 4.0E-9 T 29-03-2018 IPR007110 Immunoglobulin-like domain CKQ55_RS00230 d2632293f4a5cbe9f213c95aae8cc19e 236 SMART SM00409 156 236 0.0047 T 29-03-2018 IPR003599 Immunoglobulin subtype CKQ55_RS00230 d2632293f4a5cbe9f213c95aae8cc19e 236 Gene3D G3DSA:2.60.40.1180 156 236 3.0E-9 T 29-03-2018 CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 SUPERFAMILY SSF53850 93 297 6.88E-41 T 29-03-2018 CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 SUPERFAMILY SSF46785 6 115 5.72E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 Gene3D G3DSA:1.10.10.10 1 88 9.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 Pfam PF03466 LysR substrate binding domain 92 296 3.9E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 Gene3D G3DSA:3.40.190.10 181 269 1.7E-24 T 29-03-2018 CKQ55_RS26875 6823f3bc7dac9ff2f88c852550297146 302 Gene3D G3DSA:3.40.190.10 96 180 1.1E-10 T 29-03-2018 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 Gene3D G3DSA:3.50.50.60 5 362 3.6E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 8.6E-130 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 Pfam PF01494 FAD binding domain 7 340 1.6E-32 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.5E-18 T 29-03-2018 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-18 T 29-03-2018 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.5E-18 T 29-03-2018 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.5E-18 T 29-03-2018 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 SUPERFAMILY SSF51905 267 383 1.65E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04035 0da6341592f8a4092bc5f15d89f4a3d1 391 SUPERFAMILY SSF51905 7 178 1.65E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26815 cc52f7f270bc348658e4fc5b1c682dd0 263 Gene3D G3DSA:3.20.20.70 1 257 3.5E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS26815 cc52f7f270bc348658e4fc5b1c682dd0 263 SMART SM01133 17 233 2.3E-6 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS26815 cc52f7f270bc348658e4fc5b1c682dd0 263 Pfam PF01791 DeoC/LacD family aldolase 32 232 3.6E-19 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS26815 cc52f7f270bc348658e4fc5b1c682dd0 263 SUPERFAMILY SSF51569 3 249 1.1E-48 T 29-03-2018 CKQ55_RS26815 cc52f7f270bc348658e4fc5b1c682dd0 263 PIRSF PIRSF038992 1 263 6.4E-53 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 Pfam PF03466 LysR substrate binding domain 100 305 1.5E-34 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 Gene3D G3DSA:3.40.190.10 97 187 2.3E-19 T 29-03-2018 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 Gene3D G3DSA:3.40.190.10 188 275 2.9E-12 T 29-03-2018 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 Gene3D G3DSA:1.10.10.10 6 93 1.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 SUPERFAMILY SSF46785 10 121 2.42E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28155 a1ed7062c8e1596a06fdcd5006688746 307 SUPERFAMILY SSF53850 101 305 1.58E-33 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF50022 1243 1346 5.95E-31 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 220 247 0.21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00397 Sirohaem Fe-binding site signature 1033 1051 2.5E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00397 Sirohaem Fe-binding site signature 1076 1094 2.5E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF51905 3 182 4.34E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 101 219 4.9E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 1 100 4.2E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF51905 143 295 5.18E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 522 643 1.0E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF04324 BFD-like [2Fe-2S] binding domain 821 868 2.3E-9 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF04324 BFD-like [2Fe-2S] binding domain 882 930 1.6E-4 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 957 1020 5.8E-11 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 1076 1092 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 248 301 1.7E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 645 719 4.7E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 1.3E-14 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.3E-14 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 223 239 1.3E-14 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.3E-14 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.3E-14 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 1029 1165 2.0E-17 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.50.50.60 388 521 2.4E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.30.413.10 1028 1203 2.0E-38 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF13806 Rieske-like [2Fe-2S] domain 1244 1344 7.8E-30 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF55124 899 1038 1.45E-25 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:2.102.10.10 1239 1353 4.4E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 1244 1345 1.3E-34 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Gene3D G3DSA:3.90.480.10 842 1026 7.5E-10 T 29-03-2018 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF51905 403 537 1.32E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF51905 503 706 2.18E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 405 695 4.8E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 272 1.1E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 405 1198 0.0 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CKQ55_RS24495 12a5648bdd7d457dec41ff99ddfc7495 1356 SUPERFAMILY SSF56014 1030 1202 4.19E-49 T 29-03-2018 CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 Gene3D G3DSA:1.10.10.200 1 78 4.6E-29 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 SUPERFAMILY SSF75625 3 244 4.45E-96 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.175 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 Pfam PF01709 Transcriptional regulator 5 235 1.8E-93 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 Gene3D G3DSA:3.30.70.980 83 176 3.8E-32 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.0E-105 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS23670 17b7cee17e2a6698506ea931c18d1c8f 246 Gene3D G3DSA:3.30.70.980 177 246 2.8E-12 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS12535 3fb0d209f4ae1a99d3199565c9b5d6e4 419 Pfam PF07690 Major Facilitator Superfamily 25 372 2.8E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS12535 3fb0d209f4ae1a99d3199565c9b5d6e4 419 Gene3D G3DSA:1.20.1250.20 220 418 3.6E-14 T 29-03-2018 CKQ55_RS12535 3fb0d209f4ae1a99d3199565c9b5d6e4 419 Gene3D G3DSA:1.20.1250.20 4 206 1.6E-30 T 29-03-2018 CKQ55_RS12535 3fb0d209f4ae1a99d3199565c9b5d6e4 419 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS12535 3fb0d209f4ae1a99d3199565c9b5d6e4 419 SUPERFAMILY SSF103473 8 408 1.44E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS31870 2228a2e0f5e608573e9ff24422f4037f 80 SUPERFAMILY SSF47413 6 41 2.56E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS31870 2228a2e0f5e608573e9ff24422f4037f 80 Gene3D G3DSA:1.10.260.40 3 68 5.6E-7 T 29-03-2018 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 352 4.2E-77 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 Pfam PF07687 Peptidase dimerisation domain 167 264 8.4E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 Gene3D G3DSA:3.40.630.10 2 250 1.5E-47 T 29-03-2018 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 SUPERFAMILY SSF53187 279 366 1.73E-58 T 29-03-2018 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 SUPERFAMILY SSF53187 4 180 1.73E-58 T 29-03-2018 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 PIRSF PIRSF005962 2 367 2.3E-85 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 SUPERFAMILY SSF55031 167 278 4.97E-20 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 Gene3D G3DSA:3.40.630.10 251 367 1.3E-15 T 29-03-2018 CKQ55_RS09200 05ad441f5028bbe318f74a656a37e5e5 367 Pfam PF01546 Peptidase family M20/M25/M40 64 363 1.1E-20 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS08875 0ae77f3da3b6f305c22f5776ddce23c2 447 PIRSF PIRSF006351 9 444 7.3E-141 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS08875 0ae77f3da3b6f305c22f5776ddce23c2 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 20 434 1.9E-111 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS08875 0ae77f3da3b6f305c22f5776ddce23c2 447 Pfam PF02378 Phosphotransferase system, EIIC 36 359 3.4E-57 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 8.7E-13 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 Gene3D G3DSA:1.10.166.10 3 69 4.1E-28 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 Gene3D G3DSA:2.160.10.10 87 257 1.0E-36 T 29-03-2018 CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 SUPERFAMILY SSF51161 1 256 2.63E-79 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.1E-162 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.556 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CKQ55_RS07635 99b26e28cad3b2554a7b93d3eb2af785 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 3.5E-25 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CKQ55_RS07360 4dae7b7c6578d7b41ec253beed227753 243 Pfam PF00929 Exonuclease 9 175 1.4E-39 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS07360 4dae7b7c6578d7b41ec253beed227753 243 SUPERFAMILY SSF53098 7 183 6.15E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07360 4dae7b7c6578d7b41ec253beed227753 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 1.2E-94 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS07360 4dae7b7c6578d7b41ec253beed227753 243 Gene3D G3DSA:3.30.420.10 1 190 3.9E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07360 4dae7b7c6578d7b41ec253beed227753 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 5.0E-93 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS07360 4dae7b7c6578d7b41ec253beed227753 243 SMART SM00479 7 184 3.9E-50 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS17955 9c974d9df97f4ee160dc265c44a17697 300 Gene3D G3DSA:1.10.3720.10 17 287 1.8E-43 T 29-03-2018 CKQ55_RS17955 9c974d9df97f4ee160dc265c44a17697 300 SUPERFAMILY SSF161098 23 300 1.4E-71 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS17955 9c974d9df97f4ee160dc265c44a17697 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 294 8.5E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25030 cdbc775142ab1f9333c6ff98e40af26d 268 SUPERFAMILY SSF56529 1 260 3.14E-81 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS25030 cdbc775142ab1f9333c6ff98e40af26d 268 Hamap MF_01655 2-keto-4-pentenoate hydratase [mhpD]. 1 260 54.649 T 29-03-2018 IPR023793 2-keto-4-pentenoate hydratase GO:0008684|GO:0019439|GO:0030145 KEGG: 00360+4.2.1.80|KEGG: 00362+4.2.1.80|KEGG: 00621+4.2.1.80|KEGG: 00622+4.2.1.80|MetaCyc: PWY-5162|MetaCyc: PWY-5645 CKQ55_RS25030 cdbc775142ab1f9333c6ff98e40af26d 268 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 45 259 2.7E-18 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS25030 cdbc775142ab1f9333c6ff98e40af26d 268 Gene3D G3DSA:3.90.850.10 1 268 2.6E-56 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS21220 26229be46606f0c00f2795d959b94651 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 2.5E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS21220 26229be46606f0c00f2795d959b94651 153 SUPERFAMILY SSF55729 1 150 1.34E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS21220 26229be46606f0c00f2795d959b94651 153 Gene3D G3DSA:3.40.630.30 1 153 7.1E-33 T 29-03-2018 CKQ55_RS19430 6b595e078d2d067d3eac4b59da00318c 173 Pfam PF11127 Protein of unknown function (DUF2892) 115 166 4.6E-11 T 29-03-2018 IPR021309 Protein of unknown function DUF2892 CKQ55_RS19430 6b595e078d2d067d3eac4b59da00318c 173 Pfam PF00581 Rhodanese-like domain 7 99 3.8E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS19430 6b595e078d2d067d3eac4b59da00318c 173 SUPERFAMILY SSF52821 2 154 3.14E-30 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS19430 6b595e078d2d067d3eac4b59da00318c 173 ProSitePatterns PS00380 Rhodanese signature 1. 30 41 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS19430 6b595e078d2d067d3eac4b59da00318c 173 Gene3D G3DSA:3.40.250.10 2 121 1.6E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS19430 6b595e078d2d067d3eac4b59da00318c 173 SMART SM00450 6 102 3.2E-18 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS03455 8cecbc0ea182972c806f00af631c7018 229 SUPERFAMILY SSF161098 3 220 6.41E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS03455 8cecbc0ea182972c806f00af631c7018 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 3.1E-73 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CKQ55_RS03455 8cecbc0ea182972c806f00af631c7018 229 Gene3D G3DSA:1.10.3720.10 4 227 2.6E-39 T 29-03-2018 CKQ55_RS03455 8cecbc0ea182972c806f00af631c7018 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 3.6E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 Gene3D G3DSA:3.30.1660.10 22 90 3.9E-20 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 PIRSF PIRSF014774 1 316 3.8E-177 T 29-03-2018 IPR025539 YdgH protein CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 SUPERFAMILY SSF159871 4 94 3.53E-22 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 SUPERFAMILY SSF159871 108 177 4.84E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 Gene3D G3DSA:3.30.1660.10 249 316 2.1E-20 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 Gene3D G3DSA:3.30.1660.10 107 174 1.0E-17 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 SUPERFAMILY SSF159871 241 316 2.49E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 Pfam PF07338 Protein of unknown function (DUF1471) 261 316 1.3E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 8.2E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS25900 d0bd7125f88bf8f5a2df2144b6346fe4 316 Pfam PF07338 Protein of unknown function (DUF1471) 118 174 4.0E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS02175 ba1b9a79399543915776a3c9eb519633 145 Gene3D G3DSA:3.40.930.10 7 145 4.4E-21 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS02175 ba1b9a79399543915776a3c9eb519633 145 SUPERFAMILY SSF55804 10 142 1.01E-21 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS02175 ba1b9a79399543915776a3c9eb519633 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 11 143 1.6E-17 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS27405 001a022ba81f3893669fdace2c90e920 242 Gene3D G3DSA:3.40.50.300 2 213 1.3E-55 T 29-03-2018 CKQ55_RS27405 001a022ba81f3893669fdace2c90e920 242 Pfam PF00005 ABC transporter 22 156 1.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27405 001a022ba81f3893669fdace2c90e920 242 SMART SM00382 30 203 5.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27405 001a022ba81f3893669fdace2c90e920 242 SUPERFAMILY SSF52540 5 201 9.08E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27405 001a022ba81f3893669fdace2c90e920 242 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.6E-126 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 Gene3D G3DSA:3.40.50.720 1 162 3.2E-43 T 29-03-2018 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 SMART SM00859 3 146 2.0E-52 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 SUPERFAMILY SSF55347 154 308 1.14E-50 T 29-03-2018 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 1.4E-32 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.6E-17 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 Gene3D G3DSA:3.30.360.10 163 308 7.2E-50 T 29-03-2018 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.682 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS12205 1efc91604a368c27aacb41c9e77ffc1a 334 SUPERFAMILY SSF51735 1 172 3.16E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS07840 f83d3735e7a71806d54435b5ceb527a2 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.1E-45 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CKQ55_RS07840 f83d3735e7a71806d54435b5ceb527a2 159 Gene3D G3DSA:3.30.70.560 1 158 4.9E-55 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CKQ55_RS07840 f83d3735e7a71806d54435b5ceb527a2 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.6E-35 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CKQ55_RS07840 f83d3735e7a71806d54435b5ceb527a2 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CKQ55_RS07840 f83d3735e7a71806d54435b5ceb527a2 159 SUPERFAMILY SSF55083 1 153 2.62E-53 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.5E-73 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 SUPERFAMILY SSF52540 2 636 4.71E-161 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.815 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 Gene3D G3DSA:3.40.50.300 274 376 5.6E-21 T 29-03-2018 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 Gene3D G3DSA:3.40.50.300 1 271 2.7E-52 T 29-03-2018 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 Gene3D G3DSA:1.10.486.10 377 552 6.3E-36 T 29-03-2018 CKQ55_RS12035 668d49a8a2f7987a89aab62a3630e413 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 7.6E-71 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.129 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 SUPERFAMILY SSF53671 4 306 5.37E-100 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.1E-123 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 Gene3D G3DSA:3.40.50.1370 147 292 3.5E-48 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.5E-29 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.8E-47 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CKQ55_RS10060 c5e94689ef148f41ae278c99ee4e44f6 311 Gene3D G3DSA:3.40.50.1370 1 146 2.9E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Pfam PF00271 Helicase conserved C-terminal domain 802 906 1.4E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SMART SM00487 597 787 4.8E-35 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SUPERFAMILY SSF141259 467 545 3.01E-23 T 29-03-2018 IPR003711 CarD-like/TRCF domain CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SMART SM01058 476 573 1.7E-48 T 29-03-2018 IPR003711 CarD-like/TRCF domain CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SUPERFAMILY SSF52540 779 987 7.38E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SUPERFAMILY SSF52540 351 463 1.75E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Gene3D G3DSA:3.40.50.300 786 953 2.5E-25 T 29-03-2018 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Gene3D G3DSA:3.40.50.300 289 785 1.7E-43 T 29-03-2018 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SMART SM00490 823 907 3.2E-19 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SMART SM00982 1005 1105 4.2E-51 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Gene3D G3DSA:3.30.2060.10 130 196 3.0E-5 T 29-03-2018 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 2.9E-24 T 29-03-2018 IPR003711 CarD-like/TRCF domain CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SUPERFAMILY SSF52540 9 340 5.31E-100 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.746 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SUPERFAMILY SSF143517 992 1144 9.94E-46 T 29-03-2018 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 SUPERFAMILY SSF52540 520 780 1.78E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Pfam PF03461 TRCF domain 1006 1097 1.6E-29 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CKQ55_RS00655 ac28d877500dfc807d108d1cd47485fb 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 6.3E-20 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 Pfam PF01817 Chorismate mutase type II 29 97 5.9E-10 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 Gene3D G3DSA:1.20.59.10 20 105 1.4E-17 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 PIRSF PIRSF026640 3 179 3.5E-48 T 29-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 Gene3D G3DSA:1.20.59.10 107 164 0.4 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 29 133 9.3E-38 T 29-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 SMART SM00830 19 99 1.5E-13 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS29120 51a2e27ec407bc3ce75d661d32128bd8 180 SUPERFAMILY SSF48600 29 172 6.83E-33 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS24915 9f77a76b1a2e5b15d007c9bead3e029a 170 Gene3D G3DSA:2.60.40.1090 24 170 3.8E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS24915 9f77a76b1a2e5b15d007c9bead3e029a 170 SUPERFAMILY SSF49401 25 170 1.44E-25 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS16360 2e5873e9c2af0759d499ac8533419cda 127 Pfam PF13721 SecD export protein N-terminal TM region 19 105 1.5E-14 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CKQ55_RS16360 2e5873e9c2af0759d499ac8533419cda 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 28.114 T 29-03-2018 IPR026574 Modulator protein MzrA CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 Pfam PF04055 Radical SAM superfamily 57 228 1.7E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 5.1E-230 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 SUPERFAMILY SSF102114 6 444 3.92E-145 T 29-03-2018 CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 PIRSF PIRSF000167 3 454 3.1E-177 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 Pfam PF06969 HemN C-terminal domain 363 431 1.5E-9 T 29-03-2018 IPR010723 HemN, C-terminal CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 SMART SM00729 52 272 8.5E-56 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS12745 f05618325d60fdbc2e5daf63c193a7c0 457 Gene3D G3DSA:3.20.20.70 38 353 1.6E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 Gene3D G3DSA:3.20.20.70 1 282 9.8E-72 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 Gene3D G3DSA:2.40.50.100 520 589 2.5E-18 T 29-03-2018 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 SUPERFAMILY SSF51569 3 298 4.21E-88 T 29-03-2018 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 SUPERFAMILY SSF51230 514 588 1.15E-20 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 Pfam PF02436 Conserved carboxylase domain 290 489 1.4E-56 T 29-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 Gene3D G3DSA:1.10.10.60 397 451 4.2E-13 T 29-03-2018 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 5 585 2.9E-297 T 29-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 545 562 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 SUPERFAMILY SSF89000 295 458 2.2E-48 T 29-03-2018 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 Pfam PF00682 HMGL-like 3 268 9.4E-70 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CKQ55_RS15765 4a45da906890ff958c9ad2b2eb78adba 589 Pfam PF00364 Biotin-requiring enzyme 523 587 1.4E-16 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 Gene3D G3DSA:3.20.20.70 1 282 9.8E-72 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 Gene3D G3DSA:2.40.50.100 520 589 2.5E-18 T 29-03-2018 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 SUPERFAMILY SSF51569 3 298 4.21E-88 T 29-03-2018 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 SUPERFAMILY SSF51230 514 588 1.15E-20 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 Pfam PF02436 Conserved carboxylase domain 290 489 1.4E-56 T 29-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 Gene3D G3DSA:1.10.10.60 397 451 4.2E-13 T 29-03-2018 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 5 585 2.9E-297 T 29-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 545 562 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 SUPERFAMILY SSF89000 295 458 2.2E-48 T 29-03-2018 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 Pfam PF00682 HMGL-like 3 268 9.4E-70 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CKQ55_RS08470 4a45da906890ff958c9ad2b2eb78adba 589 Pfam PF00364 Biotin-requiring enzyme 523 587 1.4E-16 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS07105 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07105 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS07105 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS22065 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS22065 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS22065 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS04860 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS04860 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS04860 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS18275 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS18275 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS18275 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS28905 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS28905 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS28905 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS16535 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS16535 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS16535 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS04760 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS04760 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS04760 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS27945 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS27945 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS27945 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS03695 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS03695 adc3de19ffb9fd0b2cdfc03e50f59466 402 Gene3D G3DSA:3.90.350.10 50 313 4.7E-21 T 29-03-2018 IPR014736 Transposase, Tn5-like, core CKQ55_RS03695 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS00365 0f2f3d421c4c02e25880d1e04b8e1aa8 132 SUPERFAMILY SSF103084 2 120 1.57E-27 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CKQ55_RS00365 0f2f3d421c4c02e25880d1e04b8e1aa8 132 Gene3D G3DSA:3.30.1330.70 1 124 1.0E-28 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CKQ55_RS00365 0f2f3d421c4c02e25880d1e04b8e1aa8 132 PIRSF PIRSF001007 1 125 3.7E-43 T 29-03-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 CKQ55_RS00365 0f2f3d421c4c02e25880d1e04b8e1aa8 132 Pfam PF05866 Endodeoxyribonuclease RusA 6 119 7.4E-19 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.732 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 Gene3D G3DSA:3.30.1130.10 89 221 1.4E-46 T 29-03-2018 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 Pfam PF01227 GTP cyclohydrolase I 41 218 4.7E-63 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 SUPERFAMILY SSF55620 4 221 2.15E-76 T 29-03-2018 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 Gene3D G3DSA:1.10.286.10 7 85 2.9E-20 T 29-03-2018 CKQ55_RS21765 af5a5dd2a20b7de768049b5e24235aaf 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 2.0E-85 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 Gene3D G3DSA:3.40.50.300 2 241 4.1E-77 T 29-03-2018 CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 Pfam PF08402 TOBE domain 273 344 4.6E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 Gene3D G3DSA:2.40.50.140 276 337 7.1E-8 T 29-03-2018 CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 SUPERFAMILY SSF52540 7 244 1.45E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 Pfam PF00005 ABC transporter 23 164 7.7E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 SMART SM00382 31 214 4.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 SUPERFAMILY SSF50331 240 344 7.78E-15 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS06705 2984d2dd6f18500dc45f316b646d24af 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27395 b5c19278552c937b74acdc8aa8108bf2 390 Gene3D G3DSA:3.30.360.10 158 390 2.8E-35 T 29-03-2018 CKQ55_RS27395 b5c19278552c937b74acdc8aa8108bf2 390 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 9.0E-27 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS27395 b5c19278552c937b74acdc8aa8108bf2 390 SUPERFAMILY SSF51735 8 173 1.41E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27395 b5c19278552c937b74acdc8aa8108bf2 390 Gene3D G3DSA:3.40.50.720 7 157 1.4E-28 T 29-03-2018 CKQ55_RS27395 b5c19278552c937b74acdc8aa8108bf2 390 SUPERFAMILY SSF55347 150 327 8.9E-31 T 29-03-2018 CKQ55_RS27395 b5c19278552c937b74acdc8aa8108bf2 390 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 277 9.1E-11 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS30665 0a558f5ced51407b83b1cefa72acf5dd 130 SUPERFAMILY SSF47729 2 56 1.41E-23 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS30665 0a558f5ced51407b83b1cefa72acf5dd 130 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 123 2.0E-47 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CKQ55_RS30665 0a558f5ced51407b83b1cefa72acf5dd 130 Gene3D G3DSA:1.10.10.450 3 56 2.2E-27 T 29-03-2018 CKQ55_RS30665 0a558f5ced51407b83b1cefa72acf5dd 130 Pfam PF05261 TraM protein, DNA-binding 2 125 5.0E-57 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CKQ55_RS30665 0a558f5ced51407b83b1cefa72acf5dd 130 SUPERFAMILY SSF140581 60 126 9.55E-27 T 29-03-2018 CKQ55_RS15720 4d5529ff76d8051e246dc9e5380aae04 87 SUPERFAMILY SSF159871 3 87 2.09E-27 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS15720 4d5529ff76d8051e246dc9e5380aae04 87 Gene3D G3DSA:3.30.1660.10 21 87 1.2E-24 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS15720 4d5529ff76d8051e246dc9e5380aae04 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 5.5E-22 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS29770 d19f01d4c4deb9d0b4d5a5a99a0421d0 136 Pfam PF00293 NUDIX domain 6 126 2.3E-18 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS29770 d19f01d4c4deb9d0b4d5a5a99a0421d0 136 Gene3D G3DSA:3.90.79.10 2 135 2.8E-29 T 29-03-2018 CKQ55_RS29770 d19f01d4c4deb9d0b4d5a5a99a0421d0 136 SUPERFAMILY SSF55811 3 127 2.98E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS29770 d19f01d4c4deb9d0b4d5a5a99a0421d0 136 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.0E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS29770 d19f01d4c4deb9d0b4d5a5a99a0421d0 136 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.0E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 SUPERFAMILY SSF52540 49 316 7.1E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 Pfam PF00005 ABC transporter 40 196 4.6E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 Gene3D G3DSA:3.40.50.300 18 333 2.5E-73 T 29-03-2018 CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 SMART SM00382 48 254 6.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 4.3E-21 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS24645 7dcfabecc34e06ae7ac700ff3c64a31b 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 2.6E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS13000 bb1633c125f207a31fa661b95dc3d94e 221 Gene3D G3DSA:1.10.150.240 19 76 1.2E-17 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS13000 bb1633c125f207a31fa661b95dc3d94e 221 SUPERFAMILY SSF56784 4 211 2.61E-46 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13000 bb1633c125f207a31fa661b95dc3d94e 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 169 4.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS13000 bb1633c125f207a31fa661b95dc3d94e 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 4.4E-22 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13000 bb1633c125f207a31fa661b95dc3d94e 221 Gene3D G3DSA:3.40.50.1000 77 218 3.9E-19 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13000 bb1633c125f207a31fa661b95dc3d94e 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 183 4.1E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 5.6E-50 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 Gene3D G3DSA:3.40.50.1240 1 208 1.5E-47 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 SMART SM00855 2 156 8.0E-21 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 PIRSF PIRSF000709 1 193 1.5E-16 T 29-03-2018 CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 180 5.3E-55 T 29-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS04120 57a2636dabcf05875e25a2949623d963 209 SUPERFAMILY SSF53254 1 197 2.62E-53 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 SMART SM00342 28 112 1.6E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 Gene3D G3DSA:1.10.10.60 65 124 5.0E-13 T 29-03-2018 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 Pfam PF12833 Helix-turn-helix domain 34 114 5.8E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 Gene3D G3DSA:3.20.80.10 125 289 2.3E-30 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 Gene3D G3DSA:1.10.10.60 4 64 2.5E-12 T 29-03-2018 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 4.4E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 4.4E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 SMART SM00871 135 289 4.1E-42 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 Pfam PF06445 GyrI-like small molecule binding domain 135 289 5.3E-35 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 SUPERFAMILY SSF46689 64 121 1.16E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 SUPERFAMILY SSF46689 12 62 6.72E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16850 b33c364af2a29a08c749fc2e90da704d 289 SUPERFAMILY SSF55136 135 289 8.63E-36 T 29-03-2018 CKQ55_RS17605 e77f4d6e2a897a65a950752170a29d47 380 SUPERFAMILY SSF51430 48 356 2.62E-83 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17605 e77f4d6e2a897a65a950752170a29d47 380 Pfam PF00248 Aldo/keto reductase family 58 353 6.7E-64 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17605 e77f4d6e2a897a65a950752170a29d47 380 Gene3D G3DSA:3.20.20.100 46 379 1.1E-84 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.1E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 SUPERFAMILY SSF55874 6 216 1.32E-67 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Gene3D G3DSA:3.40.50.670 397 628 2.0E-78 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Pfam PF00204 DNA gyrase B 219 385 1.3E-39 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 SMART SM00387 28 174 1.5E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 5.5E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Gene3D G3DSA:3.30.230.10 218 392 9.3E-40 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 SMART SM00433 35 625 7.5E-210 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Gene3D G3DSA:3.30.565.10 18 217 2.0E-64 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 SUPERFAMILY SSF54211 218 383 7.78E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Pfam PF01751 Toprim domain 414 522 2.8E-12 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 3.9E-24 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.092 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 3.8E-152 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16820 f83d9e792e9a47eb34257e5f183eb919 631 SUPERFAMILY SSF56719 389 622 9.42E-78 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 SMART SM00895 98 227 6.0E-22 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 SMART SM00345 14 73 1.0E-26 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 Pfam PF07729 FCD domain 98 226 2.4E-20 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 Gene3D G3DSA:1.10.10.10 1 74 5.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 SUPERFAMILY SSF46785 3 77 7.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 2.5E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 SUPERFAMILY SSF48008 96 235 3.92E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS07160 313443b56e4ffd0d8635b58238e48691 258 Gene3D G3DSA:1.20.120.530 96 240 1.5E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS26065 2faa5cc716901e210194579ff6cd86a0 319 TIGRFAM TIGR00946 2a69: auxin efflux carrier 1 317 6.5E-77 T 29-03-2018 IPR014024 Auxin efflux carrier, plant type CKQ55_RS26065 2faa5cc716901e210194579ff6cd86a0 319 Pfam PF03547 Membrane transport protein 5 164 1.1E-36 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CKQ55_RS26065 2faa5cc716901e210194579ff6cd86a0 319 Pfam PF03547 Membrane transport protein 165 313 8.3E-27 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 SUPERFAMILY SSF48208 55 547 4.0E-149 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 Pfam PF01204 Trehalase 71 546 2.4E-162 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 77.41 T 29-03-2018 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 Gene3D G3DSA:1.50.10.10 56 550 4.5E-137 T 29-03-2018 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 2.7E-46 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS14360 dc00919ebd3d9b8864ece8522a89a430 550 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS09060 9974a57fdd843065a8630bb80cc34e9f 210 SUPERFAMILY SSF56529 2 206 4.71E-55 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09060 9974a57fdd843065a8630bb80cc34e9f 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 7.4E-41 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09060 9974a57fdd843065a8630bb80cc34e9f 210 Gene3D G3DSA:3.90.850.10 1 209 2.0E-46 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09060 9974a57fdd843065a8630bb80cc34e9f 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 1.1E-85 T 29-03-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.9E-34 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:2.40.50.140 1 114 4.0E-48 T 29-03-2018 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 PIRSF PIRSF002158 12 273 5.2E-100 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 SMART SM01383 42 118 1.9E-48 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 29-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.3E-131 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 SMART SM01382 124 251 5.1E-89 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 SUPERFAMILY SSF50249 3 125 5.48E-50 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.056 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.4E-55 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:2.30.30.30 119 195 2.5E-31 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:4.10.950.10 197 272 3.3E-35 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 CKQ55_RS15330 1222dfa2ea921910843a6bba597e2009 273 SUPERFAMILY SSF50104 127 269 1.87E-59 T 29-03-2018 IPR008991 Translation protein SH3-like domain CKQ55_RS05035 8a476e417d7dac1bbcfa3ac96ad316b0 372 Pfam PF01497 Periplasmic binding protein 101 316 1.0E-20 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS05035 8a476e417d7dac1bbcfa3ac96ad316b0 372 Gene3D G3DSA:3.40.50.1980 20 163 5.6E-18 T 29-03-2018 CKQ55_RS05035 8a476e417d7dac1bbcfa3ac96ad316b0 372 Gene3D G3DSA:3.40.50.1980 164 347 3.6E-35 T 29-03-2018 CKQ55_RS05035 8a476e417d7dac1bbcfa3ac96ad316b0 372 SUPERFAMILY SSF53807 31 360 1.84E-51 T 29-03-2018 CKQ55_RS25610 985f7b70cfc446fe7d02da4c67a130a8 115 Gene3D G3DSA:3.40.30.10 3 115 2.4E-30 T 29-03-2018 CKQ55_RS25610 985f7b70cfc446fe7d02da4c67a130a8 115 Pfam PF00462 Glutaredoxin 17 81 1.1E-18 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CKQ55_RS25610 985f7b70cfc446fe7d02da4c67a130a8 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.5E-47 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related CKQ55_RS25610 985f7b70cfc446fe7d02da4c67a130a8 115 PIRSF PIRSF005894 1 108 1.5E-52 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CKQ55_RS25610 985f7b70cfc446fe7d02da4c67a130a8 115 SUPERFAMILY SSF52833 2 104 1.77E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS13590 ad3c6970a587f9ea4ec1e1f8a1c1463d 81 Pfam PF06005 Cell division protein ZapB 3 80 5.2E-26 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CKQ55_RS13590 ad3c6970a587f9ea4ec1e1f8a1c1463d 81 Hamap MF_01196 Cell division protein ZapB [zapB]. 3 81 18.369 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CKQ55_RS13590 ad3c6970a587f9ea4ec1e1f8a1c1463d 81 Gene3D G3DSA:1.20.5.370 48 81 1.6E-10 T 29-03-2018 CKQ55_RS13590 ad3c6970a587f9ea4ec1e1f8a1c1463d 81 Gene3D G3DSA:1.20.5.370 15 47 7.9E-13 T 29-03-2018 CKQ55_RS13590 ad3c6970a587f9ea4ec1e1f8a1c1463d 81 SUPERFAMILY SSF47661 8 79 2.59E-5 T 29-03-2018 IPR010989 SNARE GO:0016020|GO:0016192 CKQ55_RS07815 f1ef7b88fae3aa7a07fc2f38ffca021d 178 Gene3D G3DSA:3.90.1140.10 1 178 3.0E-30 T 29-03-2018 CKQ55_RS07815 f1ef7b88fae3aa7a07fc2f38ffca021d 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 21.853 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CKQ55_RS07815 f1ef7b88fae3aa7a07fc2f38ffca021d 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 173 2.5E-39 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CKQ55_RS07815 f1ef7b88fae3aa7a07fc2f38ffca021d 178 Pfam PF02834 LigT like Phosphoesterase 92 166 7.6E-8 T 29-03-2018 IPR014051 Phosphoesterase, HXTX CKQ55_RS07815 f1ef7b88fae3aa7a07fc2f38ffca021d 178 Pfam PF02834 LigT like Phosphoesterase 11 89 1.9E-11 T 29-03-2018 IPR014051 Phosphoesterase, HXTX CKQ55_RS07815 f1ef7b88fae3aa7a07fc2f38ffca021d 178 SUPERFAMILY SSF55144 5 175 1.33E-43 T 29-03-2018 IPR009097 Cyclic phosphodiesterase CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 3.8E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 374 3.8E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 3.8E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 3.8E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 425 3.8E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 SUPERFAMILY SSF51445 8 467 5.96E-155 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 Gene3D G3DSA:3.20.20.80 6 474 4.0E-149 T 29-03-2018 CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 366 374 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CKQ55_RS05090 e1bc24e9ef609d33b9619d28d5030dc6 474 Pfam PF00232 Glycosyl hydrolase family 1 6 467 1.9E-139 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 SMART SM00382 288 483 0.91 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 SMART SM00382 38 233 2.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 SUPERFAMILY SSF52540 252 487 6.39E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 Gene3D G3DSA:3.40.50.300 246 498 6.2E-32 T 29-03-2018 CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 SUPERFAMILY SSF52540 12 236 1.62E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 Gene3D G3DSA:3.40.50.300 2 240 1.7E-52 T 29-03-2018 CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 Pfam PF00005 ABC transporter 29 178 6.5E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS21790 5a26352a3397bf0d395dee7bffe126a4 506 Pfam PF00005 ABC transporter 280 434 5.1E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 SUPERFAMILY SSF52540 188 501 1.54E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 SMART SM00382 209 389 1.7E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 Gene3D G3DSA:3.40.50.300 188 435 3.8E-24 T 29-03-2018 CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.1E-43 T 29-03-2018 CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 8.3E-222 T 29-03-2018 IPR004482 Mg chelatase-related protein CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 8.8E-90 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 SUPERFAMILY SSF54211 9 169 1.74E-29 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 2.8E-26 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CKQ55_RS12105 fc831dbcf496d4462cdc22c510403942 506 Gene3D G3DSA:3.30.230.10 2 187 2.8E-37 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 Gene3D G3DSA:3.20.20.80 4 371 4.6E-63 T 29-03-2018 CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 SUPERFAMILY SSF51445 5 379 1.45E-67 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 Pfam PF02449 Beta-galactosidase 10 376 1.6E-79 T 29-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 Pfam PF08532 Beta-galactosidase trimerisation domain 390 598 1.0E-29 T 29-03-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 SUPERFAMILY SSF52317 388 599 1.79E-29 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 PIRSF PIRSF001084 1 669 1.7E-132 T 29-03-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 Gene3D G3DSA:2.60.40.1180 611 669 3.9E-4 T 29-03-2018 CKQ55_RS10305 bd03848c0af1bcdca7049b5ef8bd6354 669 Gene3D G3DSA:3.40.50.880 386 603 1.7E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.1E-63 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 5.4E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 5.4E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 5.4E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 Gene3D G3DSA:2.40.50.100 4 155 3.6E-21 T 29-03-2018 CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 Pfam PF00364 Biotin-requiring enzyme 81 153 1.2E-24 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS29195 e9e0cc8fdadaee411a59d59a5b21afd4 155 SUPERFAMILY SSF51230 79 154 1.57E-25 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 Gene3D G3DSA:1.10.10.10 4 91 2.0E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 Pfam PF03466 LysR substrate binding domain 97 296 4.0E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 SUPERFAMILY SSF46785 9 88 3.99E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 Gene3D G3DSA:3.40.190.10 186 269 3.9E-17 T 29-03-2018 CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 SUPERFAMILY SSF53850 98 297 4.52E-29 T 29-03-2018 CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 65 4.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26050 3b29b3986fcfae3df378f11e670b3e3d 308 Gene3D G3DSA:3.40.190.10 97 185 1.7E-13 T 29-03-2018 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 4.1E-44 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 SUPERFAMILY SSF53901 4 274 7.79E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 PIRSF PIRSF000429 1 400 2.8E-128 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 Gene3D G3DSA:3.40.47.10 278 397 9.1E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 Pfam PF00108 Thiolase, N-terminal domain 5 268 6.1E-73 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 SUPERFAMILY SSF53901 276 399 7.33E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 Gene3D G3DSA:3.40.47.10 156 277 4.3E-20 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 Gene3D G3DSA:3.40.47.10 1 148 3.8E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 1.5E-218 T 29-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.2E-133 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS25980 cd3d107d4e3d5b65a8680503a14184b0 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CKQ55_RS19770 117ee1f13f2a3370636ff4ecb853a372 407 SMART SM00267 237 407 4.0E-47 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS19770 117ee1f13f2a3370636ff4ecb853a372 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 401 6.4E-41 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS19770 117ee1f13f2a3370636ff4ecb853a372 407 Gene3D G3DSA:3.30.70.270 236 406 1.1E-45 T 29-03-2018 CKQ55_RS19770 117ee1f13f2a3370636ff4ecb853a372 407 SUPERFAMILY SSF55073 253 401 2.82E-36 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS19770 117ee1f13f2a3370636ff4ecb853a372 407 Pfam PF17152 Periplasmic sensor domain 44 144 6.8E-28 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 CKQ55_RS19770 117ee1f13f2a3370636ff4ecb853a372 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 401 1.3E-33 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 Gene3D G3DSA:3.55.40.10 31 179 3.2E-23 T 29-03-2018 CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 2 171 8.4E-19 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 5.7E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 2.3E-19 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 PRINTS PR00885 Bacterial general secretion pathway protein H signature 138 153 2.3E-19 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 2.3E-19 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04820 936bdc6a74449683b352c9b161995e29 183 SUPERFAMILY SSF54523 6 100 1.49E-9 T 29-03-2018 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 Gene3D G3DSA:1.10.10.60 9 62 1.5E-17 T 29-03-2018 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 Gene3D G3DSA:1.10.357.10 63 179 1.0E-12 T 29-03-2018 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 SUPERFAMILY SSF46689 3 74 5.64E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.8E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.8E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.2E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01650 5971d0a5542312ce5185278ba5c5f579 186 SUPERFAMILY SSF48498 79 178 8.9E-22 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.559 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 Gene3D G3DSA:3.90.230.10 2 264 3.3E-88 T 29-03-2018 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 8.4E-111 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.6E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.6E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.6E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.6E-22 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 SUPERFAMILY SSF55920 3 255 3.01E-91 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS07620 f70fb2ecd7a7bf32eaf057d9d8205b0d 264 Pfam PF00557 Metallopeptidase family M24 12 242 1.3E-53 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS18200 e0b665f3725cf444abe623bc16754efc 370 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 361 1.8E-106 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS18200 e0b665f3725cf444abe623bc16754efc 370 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS18200 e0b665f3725cf444abe623bc16754efc 370 SUPERFAMILY SSF56796 3 368 2.75E-105 T 29-03-2018 CKQ55_RS18200 e0b665f3725cf444abe623bc16754efc 370 Gene3D G3DSA:1.20.1090.10 166 370 6.2E-56 T 29-03-2018 CKQ55_RS18200 e0b665f3725cf444abe623bc16754efc 370 Gene3D G3DSA:3.40.50.1970 1 163 1.3E-37 T 29-03-2018 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 SUPERFAMILY SSF55021 280 376 6.26E-21 T 29-03-2018 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 6.0E-41 T 29-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 SMART SM00830 11 91 3.2E-26 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 Pfam PF00800 Prephenate dehydratase 106 286 7.6E-60 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 PIRSF PIRSF001500 1 380 1.9E-140 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 Gene3D G3DSA:3.40.190.10 113 197 7.7E-32 T 29-03-2018 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 SUPERFAMILY SSF48600 6 93 6.04E-23 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 Gene3D G3DSA:3.30.70.260 289 383 2.4E-23 T 29-03-2018 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 Pfam PF01817 Chorismate mutase type II 11 89 1.2E-17 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 SUPERFAMILY SSF53850 105 291 8.36E-54 T 29-03-2018 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 Gene3D G3DSA:1.20.59.10 1 112 9.6E-31 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 Gene3D G3DSA:3.40.190.10 198 273 9.8E-23 T 29-03-2018 CKQ55_RS19795 245841887bf7a09d25d449f0db95d490 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CKQ55_RS13305 6b1e95f468a6f51d7475e75adbf29de1 265 Gene3D G3DSA:1.10.3720.10 11 265 7.0E-36 T 29-03-2018 CKQ55_RS13305 6b1e95f468a6f51d7475e75adbf29de1 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 262 6.5E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS13305 6b1e95f468a6f51d7475e75adbf29de1 265 TIGRFAM TIGR03255 PhnV: 2-aminoethylphosphonate ABC transport system, membrane component PhnV 2 264 2.5E-120 T 29-03-2018 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV GO:0006810|GO:0016020 CKQ55_RS13305 6b1e95f468a6f51d7475e75adbf29de1 265 SUPERFAMILY SSF161098 18 253 1.2E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19495 e98aacb777f8a0caa33d635ef7bfbd51 397 Gene3D G3DSA:1.20.1250.20 12 203 3.0E-14 T 29-03-2018 CKQ55_RS19495 e98aacb777f8a0caa33d635ef7bfbd51 397 Pfam PF07690 Major Facilitator Superfamily 20 356 9.6E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS19495 e98aacb777f8a0caa33d635ef7bfbd51 397 Gene3D G3DSA:1.20.1250.20 204 395 1.2E-19 T 29-03-2018 CKQ55_RS19495 e98aacb777f8a0caa33d635ef7bfbd51 397 SUPERFAMILY SSF103473 11 394 4.97E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 Gene3D G3DSA:1.10.10.10 4 91 5.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 Gene3D G3DSA:3.40.190.10 92 176 1.5E-17 T 29-03-2018 CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.3E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.3E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.3E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 Pfam PF03466 LysR substrate binding domain 91 292 2.8E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 SUPERFAMILY SSF46785 3 87 2.0E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 Gene3D G3DSA:3.40.190.10 177 263 1.5E-23 T 29-03-2018 CKQ55_RS18435 1c90f4654decb1c2f042415099076aa3 305 SUPERFAMILY SSF53850 93 296 4.5E-42 T 29-03-2018 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 Pfam PF00682 HMGL-like 31 311 3.1E-71 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 SUPERFAMILY SSF110921 443 548 1.96E-24 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 SUPERFAMILY SSF89000 387 434 2.08E-12 T 29-03-2018 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 553 50.963 T 29-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 549 4.6E-231 T 29-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 SUPERFAMILY SSF51569 20 328 8.97E-97 T 29-03-2018 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 Gene3D G3DSA:3.20.20.70 8 374 1.1E-109 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 549 3.7E-21 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 SMART SM00917 420 552 1.4E-20 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS19325 105f54318c60e3551b992bd29723b924 558 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS03425 47bc7c10429f3009dc4edb00496bfc31 88 Pfam PF10798 Biofilm development protein YmgB/AriR 30 87 2.1E-22 T 29-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CKQ55_RS03425 47bc7c10429f3009dc4edb00496bfc31 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 40 88 9.0E-6 T 29-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 23 446 6.1E-193 T 29-03-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 50 61 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 Gene3D G3DSA:3.20.20.70 18 307 1.7E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 351 451 3.4E-17 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 SUPERFAMILY SSF53146 338 464 3.4E-26 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 Gene3D G3DSA:3.30.420.130 335 464 1.9E-24 T 29-03-2018 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 SMART SM00729 44 274 0.0022 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 SUPERFAMILY SSF102114 38 274 2.62E-38 T 29-03-2018 CKQ55_RS22790 7c99db47492632c94bff59fb7e768c5a 468 Pfam PF04055 Radical SAM superfamily 49 228 2.3E-25 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 PRINTS PR00112 Acylphosphatase signature 26 51 5.9E-6 T 29-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 PRINTS PR00112 Acylphosphatase signature 5 20 5.9E-6 T 29-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 PRINTS PR00112 Acylphosphatase signature 61 81 5.9E-6 T 29-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 Gene3D G3DSA:3.30.70.100 1 93 5.4E-29 T 29-03-2018 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 SUPERFAMILY SSF54975 3 92 1.05E-29 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 Pfam PF00708 Acylphosphatase 8 91 5.8E-25 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 30.772 T 29-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS01805 5ed3b9e61f250782ba897741622f4af7 93 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS29155 6504cb439b0511e0654cc02432030563 400 Gene3D G3DSA:3.90.1150.10 275 400 6.3E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS29155 6504cb439b0511e0654cc02432030563 400 SUPERFAMILY SSF53383 1 398 4.79E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS29155 6504cb439b0511e0654cc02432030563 400 Pfam PF00155 Aminotransferase class I and II 32 392 4.0E-73 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS29155 6504cb439b0511e0654cc02432030563 400 Gene3D G3DSA:3.40.640.10 45 274 6.7E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS29155 6504cb439b0511e0654cc02432030563 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 Gene3D G3DSA:1.20.1250.20 6 200 1.4E-33 T 29-03-2018 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 Pfam PF07690 Major Facilitator Superfamily 21 411 1.1E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 Gene3D G3DSA:1.20.1250.20 261 473 4.2E-20 T 29-03-2018 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 9.3E-5 T 29-03-2018 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 9.3E-5 T 29-03-2018 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 9.3E-5 T 29-03-2018 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 9.3E-5 T 29-03-2018 CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 SUPERFAMILY SSF103473 13 200 5.36E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23540 a33394eac6b275b8a41e353fb8d2a55a 473 SUPERFAMILY SSF103473 250 462 5.36E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 Gene3D G3DSA:1.10.260.40 2 54 3.4E-23 T 29-03-2018 CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 Pfam PF13377 Periplasmic binding protein-like domain 169 329 6.0E-32 T 29-03-2018 CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 SMART SM00354 1 71 2.8E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.2E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 SUPERFAMILY SSF53822 61 333 2.19E-74 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 Gene3D G3DSA:3.40.50.2300 176 313 1.8E-42 T 29-03-2018 CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 SUPERFAMILY SSF47413 1 59 1.81E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS18010 41bb010a1a5cce12d246a122821e4fc6 336 Gene3D G3DSA:3.40.50.2300 55 175 1.5E-30 T 29-03-2018 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 SUPERFAMILY SSF50249 4 69 6.64E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 Gene3D G3DSA:2.40.50.140 3 70 1.9E-13 T 29-03-2018 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 SMART SM00357 6 70 1.7E-8 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.7E-19 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 PIRSF PIRSF002599 1 70 5.7E-12 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-5 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-5 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS25350 e2b33b2daf03c916987b613e92f62e7e 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-5 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 Gene3D G3DSA:3.30.70.120 227 298 1.6E-25 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 4.9E-33 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.5E-47 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 Gene3D G3DSA:3.40.190.10 1 128 1.2E-36 T 29-03-2018 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 SUPERFAMILY SSF54913 226 298 7.78E-22 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 Gene3D G3DSA:3.40.190.10 129 223 4.6E-23 T 29-03-2018 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.1E-24 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.226 T 29-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 5.8E-58 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CKQ55_RS22765 d404e019468b0f3b145e6f7a6af70739 299 SUPERFAMILY SSF53850 6 224 1.29E-69 T 29-03-2018 CKQ55_RS26590 d1ae866defb2338dcd8debbadaa3fc94 489 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 210 392 1.2E-42 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS26590 d1ae866defb2338dcd8debbadaa3fc94 489 Pfam PF11604 Copper binding periplasmic protein CusF 418 480 5.0E-17 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF CKQ55_RS26590 d1ae866defb2338dcd8debbadaa3fc94 489 Gene3D G3DSA:2.40.50.100 127 192 0.0045 T 29-03-2018 CKQ55_RS26590 d1ae866defb2338dcd8debbadaa3fc94 489 Gene3D G3DSA:2.40.50.100 204 464 2.2E-8 T 29-03-2018 CKQ55_RS26590 d1ae866defb2338dcd8debbadaa3fc94 489 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 316 8.4E-63 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS26590 d1ae866defb2338dcd8debbadaa3fc94 489 SUPERFAMILY SSF111369 131 322 4.05E-17 T 29-03-2018 CKQ55_RS22565 61e4fa43a99b0c619386ed6a9f302e05 615 Pfam PF05170 AsmA family 2 211 1.2E-14 T 29-03-2018 IPR007844 AsmA CKQ55_RS22565 61e4fa43a99b0c619386ed6a9f302e05 615 Pfam PF13502 AsmA-like C-terminal region 356 539 3.1E-19 T 29-03-2018 IPR032712 AsmA-like, C-terminal CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 Pfam PF00294 pfkB family carbohydrate kinase 9 324 8.6E-47 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 636 1.2E-139 T 29-03-2018 IPR018659 Protein of unknown function DUF2090 CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 SUPERFAMILY SSF53613 6 332 3.74E-71 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 Gene3D G3DSA:3.40.1190.20 8 337 3.4E-64 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 8.1E-126 T 29-03-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS09960 d21a7c577c40742f2253a60fcd69d4a7 637 Gene3D G3DSA:3.20.20.70 343 637 2.7E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS16600 ada60dfedea98432dfb1c3fab47aa1d7 356 Gene3D G3DSA:3.30.1180.20 184 356 1.2E-54 T 29-03-2018 CKQ55_RS16600 ada60dfedea98432dfb1c3fab47aa1d7 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 6.2E-153 T 29-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CKQ55_RS16600 ada60dfedea98432dfb1c3fab47aa1d7 356 SUPERFAMILY SSF82549 10 355 2.35E-125 T 29-03-2018 CKQ55_RS16600 ada60dfedea98432dfb1c3fab47aa1d7 356 Pfam PF02733 Dak1 domain 18 351 9.0E-127 T 29-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16600 ada60dfedea98432dfb1c3fab47aa1d7 356 Gene3D G3DSA:3.40.50.10440 11 183 1.3E-66 T 29-03-2018 CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 251 2.7E-60 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 250 2.9E-82 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 Gene3D G3DSA:3.40.190.10 10 136 1.1E-33 T 29-03-2018 CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 Gene3D G3DSA:3.40.190.10 137 257 3.0E-14 T 29-03-2018 CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 SUPERFAMILY SSF53850 1 254 9.75E-65 T 29-03-2018 CKQ55_RS05010 3fdb076695247fed435b45a8b738a070 258 SMART SM00062 24 253 3.2E-61 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Pfam PF02310 B12 binding domain 748 840 2.6E-18 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 SUPERFAMILY SSF47644 653 739 2.48E-28 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 SUPERFAMILY SSF56507 902 1226 7.59E-134 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Gene3D G3DSA:3.40.50.280 732 903 1.1E-55 T 29-03-2018 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 TIGRFAM TIGR02082 metH: methionine synthase 13 1192 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 SUPERFAMILY SSF82282 7 399 1.31E-118 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Pfam PF00809 Pterin binding enzyme 360 598 2.7E-62 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 SMART SM01018 657 740 8.5E-44 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Pfam PF02607 B12 binding domain 660 733 6.1E-24 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 7.0E-78 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Gene3D G3DSA:3.20.20.20 345 644 6.9E-75 T 29-03-2018 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 6.2E-126 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 SUPERFAMILY SSF51717 356 630 1.96E-88 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 PIRSF PIRSF000381 1 1195 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Gene3D G3DSA:1.10.1240.10 652 731 5.3E-37 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Gene3D G3DSA:3.20.20.330 2 337 1.1E-110 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Gene3D G3DSA:3.10.196.10 956 1080 3.2E-44 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 Gene3D G3DSA:3.10.196.10 1081 1227 1.2E-65 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11365 343570ba3661a1a80029d0aa2a177840 1227 SUPERFAMILY SSF52242 742 894 7.59E-48 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 SUPERFAMILY SSF55904 563 711 1.57E-45 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Gene3D G3DSA:3.40.640.10 101 412 5.5E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Gene3D G3DSA:3.40.50.220 3 100 4.6E-24 T 29-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 SUPERFAMILY SSF52172 1 100 6.46E-26 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 PIRSF PIRSF009393 1 712 3.0E-286 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 1.6E-195 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 SUPERFAMILY SSF53383 101 558 2.63E-122 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 2.6E-47 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 70 5.2E-14 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Gene3D G3DSA:3.90.1150.10 413 592 4.3E-54 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS17060 461c239d5eaebd8c53f11a24684d0a1c 712 Gene3D G3DSA:3.90.100.10 593 712 8.5E-35 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS05865 2e346ccbb031b6fbe1d9f8712e7e8e6f 159 PIRSF PIRSF006181 1 159 3.7E-59 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CKQ55_RS05865 2e346ccbb031b6fbe1d9f8712e7e8e6f 159 Gene3D G3DSA:3.90.960.10 1 159 1.4E-43 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS05865 2e346ccbb031b6fbe1d9f8712e7e8e6f 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 8.4E-57 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CKQ55_RS05865 2e346ccbb031b6fbe1d9f8712e7e8e6f 159 SUPERFAMILY SSF55826 2 155 5.36E-45 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS05865 2e346ccbb031b6fbe1d9f8712e7e8e6f 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 4.2E-23 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 2.1E-185 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.607 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.9E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 Pfam PF00871 Acetokinase family 6 393 3.2E-176 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 SUPERFAMILY SSF53067 4 199 2.52E-62 T 29-03-2018 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 Gene3D G3DSA:3.30.420.40 199 400 1.6E-76 T 29-03-2018 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 PIRSF PIRSF000722 2 400 2.0E-142 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 SUPERFAMILY SSF53067 160 398 4.17E-84 T 29-03-2018 CKQ55_RS21070 db45926fd570b248a70aa11efc572ab7 400 Gene3D G3DSA:3.30.420.40 5 198 1.1E-66 T 29-03-2018 CKQ55_RS29275 d2f37700d4dc7decef4ea54aab8826df 168 Pfam PF08534 Redoxin 20 163 5.8E-30 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CKQ55_RS29275 d2f37700d4dc7decef4ea54aab8826df 168 SUPERFAMILY SSF52833 4 164 1.78E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS29275 d2f37700d4dc7decef4ea54aab8826df 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 29-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CKQ55_RS29275 d2f37700d4dc7decef4ea54aab8826df 168 Gene3D G3DSA:3.40.30.10 6 168 1.7E-23 T 29-03-2018 CKQ55_RS29275 d2f37700d4dc7decef4ea54aab8826df 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.54 T 29-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 Pfam PF03466 LysR substrate binding domain 90 290 1.2E-32 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 Gene3D G3DSA:3.40.190.10 88 177 3.9E-15 T 29-03-2018 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.6E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 SUPERFAMILY SSF46785 1 84 9.65E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 SUPERFAMILY SSF53850 92 291 8.15E-33 T 29-03-2018 CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 Gene3D G3DSA:1.10.10.10 1 83 5.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08255 d5d66d6531896367b20ba16d174513cc 298 Gene3D G3DSA:3.40.190.10 178 263 8.9E-14 T 29-03-2018 CKQ55_RS18350 4837a9773d9388f6ca88968c9872ac54 264 Gene3D G3DSA:3.40.50.1400 1 124 5.7E-14 T 29-03-2018 CKQ55_RS18350 4837a9773d9388f6ca88968c9872ac54 264 PIRSF PIRSF033579 1 264 4.2E-107 T 29-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CKQ55_RS18350 4837a9773d9388f6ca88968c9872ac54 264 SUPERFAMILY SSF53800 2 256 1.19E-82 T 29-03-2018 CKQ55_RS18350 4837a9773d9388f6ca88968c9872ac54 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 1.4E-103 T 29-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CKQ55_RS18350 4837a9773d9388f6ca88968c9872ac54 264 Gene3D G3DSA:3.40.50.1400 125 236 2.3E-23 T 29-03-2018 CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 Gene3D G3DSA:3.10.580.10 283 434 3.0E-27 T 29-03-2018 CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 SUPERFAMILY SSF56176 437 522 3.54E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 SUPERFAMILY SSF54631 290 424 1.59E-25 T 29-03-2018 CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 Gene3D G3DSA:3.30.465.10 435 517 3.1E-23 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 SMART SM01091 439 518 1.7E-26 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 Pfam PF00571 CBS domain 371 422 2.2E-7 T 29-03-2018 IPR000644 CBS domain CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 Pfam PF00571 CBS domain 302 358 0.0011 T 29-03-2018 IPR000644 CBS domain CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 Pfam PF03471 Transporter associated domain 440 516 3.0E-19 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS22570 9ab70ce125bdbc415b8425c314d2b96d 528 Pfam PF03741 Integral membrane protein TerC family 14 203 5.7E-50 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 Gene3D G3DSA:2.40.30.10 297 383 2.1E-28 T 29-03-2018 CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 Gene3D G3DSA:2.30.30.280 228 295 1.2E-28 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 21 375 1.3E-158 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 21 376 40.726 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 Pfam PF03054 tRNA methyl transferase 21 375 3.6E-144 T 29-03-2018 CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 Gene3D G3DSA:3.40.50.620 12 227 7.9E-66 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS00510 aa84a58671cc50e82da3acde7dbfd4dc 383 SUPERFAMILY SSF52402 18 310 6.62E-58 T 29-03-2018 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 5.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 5.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 5.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 5.1E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 SUPERFAMILY SSF52374 4 328 5.63E-109 T 29-03-2018 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 Gene3D G3DSA:3.10.290.10 331 424 1.3E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.546 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 2.3E-147 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 2.2E-91 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 Pfam PF01479 S4 domain 359 396 5.2E-5 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 Gene3D G3DSA:1.10.240.10 228 330 2.1E-32 T 29-03-2018 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 Gene3D G3DSA:3.40.50.620 1 227 6.0E-70 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 SUPERFAMILY SSF55174 327 423 4.45E-20 T 29-03-2018 CKQ55_RS25695 63b3dc736921ad73414c63251ee83e99 424 SMART SM00363 358 419 2.4E-4 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Gene3D G3DSA:3.30.70.1430 558 660 1.1E-14 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82714 190 271 2.22E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Gene3D G3DSA:3.30.70.1430 45 149 2.5E-28 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82866 794 1017 1.44E-42 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Gene3D G3DSA:1.20.1640.10 803 1026 2.5E-35 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Gene3D G3DSA:1.20.1640.10 300 501 5.6E-31 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Gene3D G3DSA:3.30.2090.10 186 272 4.7E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82693 273 329 2.01E-14 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82693 144 187 2.01E-14 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Pfam PF00873 AcrB/AcrD/AcrF family 9 1011 1.4E-154 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.9E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 5.9E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.9E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.9E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.9E-17 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82714 710 795 1.96E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 Gene3D G3DSA:3.30.2090.10 709 796 8.1E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82866 301 493 2.75E-34 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82693 557 605 6.8E-6 T 29-03-2018 CKQ55_RS01625 1a69fe149a94c24f1e6ff13acb98ca15 1026 SUPERFAMILY SSF82693 45 141 4.01E-18 T 29-03-2018 CKQ55_RS18825 6fd815e6d2f1d00948f81ca83543077a 350 Pfam PF00419 Fimbrial protein 205 350 2.4E-22 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS18825 6fd815e6d2f1d00948f81ca83543077a 350 SUPERFAMILY SSF49401 211 350 4.42E-17 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS18825 6fd815e6d2f1d00948f81ca83543077a 350 Gene3D G3DSA:2.60.40.1090 200 350 8.7E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS08140 f0456cae784ab3c96b2d51b48b386cff 419 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 364 388 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CKQ55_RS08140 f0456cae784ab3c96b2d51b48b386cff 419 Pfam PF01098 Cell cycle protein 52 407 1.3E-128 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CKQ55_RS08140 f0456cae784ab3c96b2d51b48b386cff 419 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 50 405 5.8E-135 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CKQ55_RS08140 f0456cae784ab3c96b2d51b48b386cff 419 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 48 415 42.067 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.2E-103 T 29-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 Gene3D G3DSA:3.30.1020.10 154 183 1.6E-9 T 29-03-2018 CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 SUPERFAMILY SSF52833 1 186 1.71E-53 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 Gene3D G3DSA:3.40.30.10 5 153 8.7E-32 T 29-03-2018 CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 Pfam PF00578 AhpC/TSA family 10 133 1.5E-32 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS04235 413a0f7572e9c0012a50576adc19ec97 187 PIRSF PIRSF000239 1 187 3.6E-50 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS03330 57afabb95819d9652e4e6b7e87377962 240 Pfam PF00005 ABC transporter 19 165 2.2E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03330 57afabb95819d9652e4e6b7e87377962 240 Gene3D G3DSA:3.40.50.300 1 227 9.1E-43 T 29-03-2018 CKQ55_RS03330 57afabb95819d9652e4e6b7e87377962 240 SMART SM00382 26 214 8.8E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03330 57afabb95819d9652e4e6b7e87377962 240 SUPERFAMILY SSF52540 2 225 1.75E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 4.2E-142 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 SUPERFAMILY SSF54534 96 241 2.95E-37 T 29-03-2018 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 Gene3D G3DSA:3.30.70.1050 1 118 1.8E-34 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 PIRSF PIRSF003095 1 432 1.1E-129 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 4.0E-42 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 SUPERFAMILY SSF109998 248 429 3.79E-47 T 29-03-2018 IPR027304 Trigger factor/SurA domain CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 232 3.7E-14 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 SUPERFAMILY SSF102735 1 131 4.05E-39 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 2.0E-40 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.041 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CKQ55_RS06205 2fcae2899f1114426b934e82a7d52bbd 432 Gene3D G3DSA:1.10.3120.10 211 389 8.0E-47 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 Gene3D G3DSA:1.10.10.10 2 96 1.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 SMART SM00418 16 95 5.9E-21 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 SUPERFAMILY SSF46785 13 98 6.34E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.5E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.5E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.5E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS19435 63a916e6d757818407a91f365a98f3cb 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 3.6E-15 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 1.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 1.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 SMART SM00866 107 243 3.8E-30 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 1.7E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 Gene3D G3DSA:3.40.1410.10 93 247 7.4E-34 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 Gene3D G3DSA:1.10.10.10 9 89 4.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 SUPERFAMILY SSF46785 19 90 1.72E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 SUPERFAMILY SSF64288 75 246 8.17E-39 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 SMART SM00345 28 87 3.7E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS22100 4cfe7af4c812a425b3ef16882d10b438 248 Pfam PF07702 UTRA domain 108 242 2.4E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 1.8E-27 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 5.1E-83 T 29-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 PIRSF PIRSF004983 1 556 1.9E-180 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.477 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 SUPERFAMILY SSF52518 7 174 1.02E-31 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Gene3D G3DSA:3.40.50.1220 217 367 4.6E-17 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Gene3D G3DSA:3.40.50.970 368 551 3.6E-23 T 29-03-2018 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 4.2E-138 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 534 2.3E-10 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 Gene3D G3DSA:3.40.50.970 1 204 2.7E-54 T 29-03-2018 CKQ55_RS21230 ad75b132d214e922e1a588232fdfe43f 556 SUPERFAMILY SSF52518 366 553 1.71E-34 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.7E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.7E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.7E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.7E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.7E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.7E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 3.5E-53 T 29-03-2018 CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 182 3.5E-7 T 29-03-2018 CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 SUPERFAMILY SSF51735 4 242 1.04E-70 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 Gene3D G3DSA:3.40.50.720 1 40 3.2E-6 T 29-03-2018 CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 Gene3D G3DSA:3.40.50.720 41 243 1.3E-59 T 29-03-2018 CKQ55_RS18890 18481c5a306aa60282c03a80e110783e 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 Gene3D G3DSA:3.20.20.80 3 495 3.7E-72 T 29-03-2018 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 SUPERFAMILY SSF51445 49 358 4.11E-62 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 SUPERFAMILY SSF51445 439 468 4.11E-62 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 SMART SM00495 652 702 7.8E-4 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 SUPERFAMILY SSF54556 370 437 5.8E-11 T 29-03-2018 IPR029070 Chitinase insertion domain CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 Pfam PF00704 Glycosyl hydrolases family 18 54 467 6.5E-64 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 Gene3D G3DSA:2.10.10.20 648 705 4.1E-10 T 29-03-2018 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 SMART SM00636 53 467 3.4E-59 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 Gene3D G3DSA:3.40.1850.10 530 629 1.5E-10 T 29-03-2018 CKQ55_RS04445 a6140ce9c3340f23bd24c27eb5a5fa48 705 SUPERFAMILY SSF51055 649 703 7.46E-8 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CKQ55_RS29085 fd3c72e86a07ce641c8457b342ae1753 142 SUPERFAMILY SSF102712 1 132 3.92E-25 T 29-03-2018 CKQ55_RS29085 fd3c72e86a07ce641c8457b342ae1753 142 Gene3D G3DSA:3.40.140.10 1 142 8.4E-22 T 29-03-2018 CKQ55_RS29085 fd3c72e86a07ce641c8457b342ae1753 142 SMART SM00232 1 129 0.0016 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 CKQ55_RS29085 fd3c72e86a07ce641c8457b342ae1753 142 Pfam PF14464 Prokaryotic homologs of the JAB domain 8 126 4.0E-23 T 29-03-2018 IPR028090 JAB domain, prokaryotic CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 SUPERFAMILY SSF100920 384 539 2.35E-61 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 5.7E-292 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.1E-80 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 SUPERFAMILY SSF53067 187 382 2.07E-68 T 29-03-2018 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 Gene3D G3DSA:2.60.34.10 390 531 9.2E-65 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 SUPERFAMILY SSF53067 4 183 2.94E-65 T 29-03-2018 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 Gene3D G3DSA:3.30.420.40 1 196 3.7E-80 T 29-03-2018 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 SUPERFAMILY SSF100934 507 602 7.85E-29 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.983 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 Pfam PF00012 Hsp70 protein 4 602 3.9E-268 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 Gene3D G3DSA:3.30.420.40 197 366 7.3E-46 T 29-03-2018 CKQ55_RS08615 939efb888aff72842f6e02b729193046 638 Gene3D G3DSA:1.20.1270.10 532 618 6.4E-21 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 310 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 Pfam PF14525 AraC-binding-like domain 27 199 5.4E-18 T 29-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 Gene3D G3DSA:1.10.10.60 207 267 9.2E-6 T 29-03-2018 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 SUPERFAMILY SSF46689 267 313 1.34E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 314 7.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 298 7.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 SMART SM00342 231 314 9.3E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 Pfam PF12833 Helix-turn-helix domain 237 312 1.5E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27230 3335a3db33b8262c23405c4f887b8144 332 Gene3D G3DSA:1.10.10.60 268 327 1.9E-9 T 29-03-2018 CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 Gene3D G3DSA:3.40.50.720 159 237 2.2E-10 T 29-03-2018 CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 Gene3D G3DSA:3.40.50.720 5 158 6.7E-45 T 29-03-2018 CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 SUPERFAMILY SSF51735 2 194 7.86E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 Pfam PF00106 short chain dehydrogenase 8 193 4.5E-48 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.7E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 184 2.3E-4 T 29-03-2018 CKQ55_RS04970 61527e383efc1a83322747436a3a889f 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 Gene3D G3DSA:3.40.50.300 312 547 3.8E-42 T 29-03-2018 CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 SMART SM00382 348 535 2.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 SUPERFAMILY SSF52540 313 535 6.26E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 SUPERFAMILY SSF90123 5 299 3.01E-26 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 Gene3D G3DSA:1.20.1560.10 1 311 6.6E-22 T 29-03-2018 CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 Pfam PF00005 ABC transporter 341 477 1.3E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 1.2E-110 T 29-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CKQ55_RS21435 f61a851e9c4612e5bc2258deb303eee1 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 SUPERFAMILY SSF53649 311 510 1.01E-72 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 SUPERFAMILY SSF53649 5 79 1.01E-72 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 Gene3D G3DSA:3.40.1450.10 79 302 4.8E-95 T 29-03-2018 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 7.8E-82 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 Pfam PF01676 Metalloenzyme superfamily 6 500 2.1E-82 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 SUPERFAMILY SSF64158 79 310 1.83E-84 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.492 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 PIRSF PIRSF001492 1 514 6.6E-204 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 Gene3D G3DSA:3.40.720.10 303 513 8.3E-34 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS13820 af188fa99df0e2569ba3ec90d216f94f 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 3.5E-243 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.2E-100 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.181 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 Gene3D G3DSA:3.30.300.20 17 107 1.2E-27 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 SUPERFAMILY SSF54814 2 106 1.65E-37 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 29-03-2018 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 Pfam PF07650 KH domain 38 111 5.9E-19 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 SMART SM00322 60 125 1.7E-6 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15345 2ec119082dafeb5ac62acb2f2ffc8916 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS19075 0a37c99de9b1bf4525ea90b59ac046ec 290 SUPERFAMILY SSF52540 93 286 3.86E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19075 0a37c99de9b1bf4525ea90b59ac046ec 290 PIRSF PIRSF005624 70 290 3.9E-93 T 29-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CKQ55_RS19075 0a37c99de9b1bf4525ea90b59ac046ec 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 8.8E-35 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CKQ55_RS19075 0a37c99de9b1bf4525ea90b59ac046ec 290 Gene3D G3DSA:3.40.50.300 104 269 3.1E-22 T 29-03-2018 CKQ55_RS19075 0a37c99de9b1bf4525ea90b59ac046ec 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 1.5E-97 T 29-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 6 166 1.0E-43 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 SUPERFAMILY SSF48179 263 451 8.5E-45 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 196 439 1.5E-86 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 Gene3D G3DSA:3.40.50.720 2 260 1.0E-83 T 29-03-2018 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 Gene3D G3DSA:1.10.1040.10 262 454 1.5E-45 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 SUPERFAMILY SSF51735 4 260 2.48E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 1.4E-16 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 1.4E-16 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 1.4E-16 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS22145 67bee1e3c31eb11a503edfd3d8e20856 455 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 1.4E-16 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.865 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 SUPERFAMILY SSF53383 5 390 1.61E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.1E-234 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 Gene3D G3DSA:3.90.1150.10 234 404 2.6E-52 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 PIRSF PIRSF005572 2 384 1.2E-143 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 Pfam PF00266 Aminotransferase class-V 5 368 5.8E-89 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS20120 e615528bbe3e83fcf057cde67fa20628 404 Gene3D G3DSA:3.40.640.10 1 233 1.4E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 Gene3D G3DSA:3.40.50.980 96 257 1.8E-22 T 29-03-2018 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 Gene3D G3DSA:3.30.300.30 326 433 2.6E-8 T 29-03-2018 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 Gene3D G3DSA:3.40.50.980 9 95 0.39 T 29-03-2018 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 11 432 9.7E-235 T 29-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 SUPERFAMILY SSF56801 15 395 1.7E-61 T 29-03-2018 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 Pfam PF00501 AMP-binding enzyme 78 289 2.2E-16 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 Pfam PF14535 AMP-binding enzyme C-terminal domain 336 432 5.4E-26 T 29-03-2018 IPR028154 AMP-dependent ligase, C-terminal CKQ55_RS28295 632366c4453948f586d423baa7e25c79 438 PIRSF PIRSF006444 1 434 2.2E-207 T 29-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 SUPERFAMILY SSF52540 932 1111 5.33E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 Pfam PF08751 TrwC relaxase 10 283 2.2E-75 T 29-03-2018 IPR014862 TrwC relaxase CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1459 0.0 T 29-03-2018 IPR014129 Conjugative transfer relaxase protein TraI CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 Pfam PF13604 AAA domain 967 1150 4.4E-34 T 29-03-2018 CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 Gene3D G3DSA:3.40.50.300 1131 1458 0.0024 T 29-03-2018 CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 SUPERFAMILY SSF52540 1084 1146 1.22E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 SUPERFAMILY SSF52540 1219 1251 1.22E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 SUPERFAMILY SSF52540 1328 1465 1.22E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 SUPERFAMILY SSF55464 1 303 3.94E-104 T 29-03-2018 CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 Pfam PF07057 DNA helicase TraI 1430 1548 5.5E-46 T 29-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 2.9E-106 T 29-03-2018 IPR014059 Conjugative relaxase, N-terminal CKQ55_RS31205 92c03c50d57216dab58c598e16ae1aec 1746 Gene3D G3DSA:3.40.50.300 814 1130 1.6E-17 T 29-03-2018 CKQ55_RS29360 398c0b12280869f2226f066ff4b15345 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 4.5E-10 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS29360 398c0b12280869f2226f066ff4b15345 296 Gene3D G3DSA:1.10.3720.10 15 285 5.6E-29 T 29-03-2018 CKQ55_RS29360 398c0b12280869f2226f066ff4b15345 296 SUPERFAMILY SSF161098 90 277 6.67E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29360 398c0b12280869f2226f066ff4b15345 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.6E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS03390 01d4b82eb4c7cc9aedce63939f26fbba 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 29-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CKQ55_RS03390 01d4b82eb4c7cc9aedce63939f26fbba 427 SUPERFAMILY SSF51126 76 157 7.97E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS03390 01d4b82eb4c7cc9aedce63939f26fbba 427 SUPERFAMILY SSF51126 192 420 7.97E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS03390 01d4b82eb4c7cc9aedce63939f26fbba 427 Pfam PF01095 Pectinesterase 195 341 2.1E-10 T 29-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CKQ55_RS03390 01d4b82eb4c7cc9aedce63939f26fbba 427 Gene3D G3DSA:2.160.20.10 74 426 2.9E-46 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Pfam PF01966 HD domain 231 328 1.0E-11 T 29-03-2018 IPR006674 HD domain CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 52.954 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 SUPERFAMILY SSF81891 120 402 1.22E-54 T 29-03-2018 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 PIRSF PIRSF000813 1 408 2.6E-202 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 SUPERFAMILY SSF81301 2 119 1.53E-31 T 29-03-2018 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Pfam PF01743 Poly A polymerase head domain 3 122 4.3E-19 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Gene3D G3DSA:3.30.460.10 1 118 8.3E-30 T 29-03-2018 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 4.9E-15 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 45.725 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CKQ55_RS16715 dd96dcef79bfa3d62dd2d05c03eb77f9 413 Gene3D G3DSA:1.10.3090.10 119 408 1.0E-56 T 29-03-2018 CKQ55_RS30490 15bf835541f8844eb8f24a900ceef660 263 Pfam PF13462 Thioredoxin 94 231 1.7E-7 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS30490 15bf835541f8844eb8f24a900ceef660 263 Gene3D G3DSA:3.40.30.10 79 263 5.8E-18 T 29-03-2018 CKQ55_RS30490 15bf835541f8844eb8f24a900ceef660 263 SUPERFAMILY SSF52833 83 259 1.12E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 Gene3D G3DSA:3.40.50.300 2 279 9.5E-52 T 29-03-2018 CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 SUPERFAMILY SSF52540 119 253 2.42E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 SUPERFAMILY SSF52540 2 92 2.42E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 Gene3D G3DSA:3.40.50.300 309 610 5.8E-51 T 29-03-2018 CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 SMART SM00382 337 506 4.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 SMART SM00382 26 223 4.4E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 Pfam PF00005 ABC transporter 328 459 9.8E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 Pfam PF00005 ABC transporter 17 178 7.6E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 SUPERFAMILY SSF52540 294 515 2.67E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15205 8e28eea0e46c0a32e0649a93d27d51df 634 Pfam PF12848 ABC transporter 217 297 1.7E-28 T 29-03-2018 IPR032781 ABC-transporter extension domain CKQ55_RS27240 73b0f99a82c02914d790dbf8d5da3a8b 160 Pfam PF01152 Bacterial-like globin 9 123 7.2E-9 T 29-03-2018 IPR001486 Truncated hemoglobin GO:0019825 CKQ55_RS27240 73b0f99a82c02914d790dbf8d5da3a8b 160 SUPERFAMILY SSF46458 4 121 2.47E-20 T 29-03-2018 IPR009050 Globin-like CKQ55_RS27240 73b0f99a82c02914d790dbf8d5da3a8b 160 Gene3D G3DSA:1.10.490.10 1 134 8.0E-23 T 29-03-2018 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 Gene3D G3DSA:1.10.10.10 1 87 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 Pfam PF03466 LysR substrate binding domain 91 293 5.2E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 SUPERFAMILY SSF53850 92 293 2.53E-38 T 29-03-2018 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 Gene3D G3DSA:3.40.190.10 92 179 3.3E-11 T 29-03-2018 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 Gene3D G3DSA:3.40.190.10 180 268 3.8E-24 T 29-03-2018 CKQ55_RS28790 4f043db9c92b17a783cdbebdb0ae3ec5 294 SUPERFAMILY SSF46785 6 89 3.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.889 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 SUPERFAMILY SSF53383 2 425 9.5E-140 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 Gene3D G3DSA:3.90.1150.10 1 181 6.4E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.0E-204 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 Pfam PF00202 Aminotransferase class-III 32 395 8.0E-80 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 Gene3D G3DSA:3.40.640.10 182 304 1.8E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS07690 6b65ed7c0a4d29ba03021e01129ce05a 426 Gene3D G3DSA:3.90.1150.10 305 426 1.3E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS12460 1cb9ef3a5f74dede6617f35bd490c843 556 Pfam PF04932 O-Antigen ligase 202 351 1.0E-14 T 29-03-2018 IPR007016 O-antigen ligase-related CKQ55_RS12460 1cb9ef3a5f74dede6617f35bd490c843 556 Gene3D G3DSA:1.25.40.10 254 556 8.9E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS12460 1cb9ef3a5f74dede6617f35bd490c843 556 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 371 553 1.7E-19 T 29-03-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 Pfam PF01476 LysM domain 51 89 5.4E-7 T 29-03-2018 IPR018392 LysM domain CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 SUPERFAMILY SSF141523 101 238 9.42E-27 T 29-03-2018 CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 Gene3D G3DSA:2.40.440.10 98 240 1.1E-27 T 29-03-2018 CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 Pfam PF03734 L,D-transpeptidase catalytic domain 102 238 3.7E-18 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 Gene3D G3DSA:3.10.350.10 39 97 3.9E-8 T 29-03-2018 CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 SUPERFAMILY SSF54106 45 89 9.42E-5 T 29-03-2018 IPR018392 LysM domain CKQ55_RS00660 3cd65f452ad9b170bc4fd843920f936e 319 SMART SM00257 44 89 2.0E-5 T 29-03-2018 IPR018392 LysM domain CKQ55_RS01610 9c9a20a74f1e6e43744f0d3270c8476b 379 Gene3D G3DSA:1.20.1250.20 190 379 0.0015 T 29-03-2018 CKQ55_RS01610 9c9a20a74f1e6e43744f0d3270c8476b 379 Pfam PF07690 Major Facilitator Superfamily 8 328 1.2E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS01610 9c9a20a74f1e6e43744f0d3270c8476b 379 Gene3D G3DSA:1.20.1250.20 2 186 1.9E-21 T 29-03-2018 CKQ55_RS01610 9c9a20a74f1e6e43744f0d3270c8476b 379 SUPERFAMILY SSF103473 3 370 3.66E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 Gene3D G3DSA:1.10.455.10 6 156 1.8E-61 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.334 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.7E-65 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 PIRSF PIRSF002122 3 156 1.4E-63 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 SUPERFAMILY SSF47973 6 149 2.75E-60 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.7E-71 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15270 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS17505 43e641a45feac97d54e39fed4913281e 241 Gene3D G3DSA:3.10.350.10 22 103 2.9E-17 T 29-03-2018 CKQ55_RS17505 43e641a45feac97d54e39fed4913281e 241 SUPERFAMILY SSF51261 29 232 7.85E-46 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS17505 43e641a45feac97d54e39fed4913281e 241 SMART SM00257 29 73 4.7E-17 T 29-03-2018 IPR018392 LysM domain CKQ55_RS17505 43e641a45feac97d54e39fed4913281e 241 Pfam PF01476 LysM domain 30 72 1.6E-16 T 29-03-2018 IPR018392 LysM domain CKQ55_RS17505 43e641a45feac97d54e39fed4913281e 241 Gene3D G3DSA:2.70.70.10 104 240 4.1E-35 T 29-03-2018 CKQ55_RS17505 43e641a45feac97d54e39fed4913281e 241 Pfam PF01551 Peptidase family M23 135 228 5.1E-29 T 29-03-2018 IPR016047 Peptidase M23 CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 Gene3D G3DSA:3.40.50.2300 2 131 1.7E-25 T 29-03-2018 CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 Gene3D G3DSA:1.10.10.10 132 238 6.4E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 SMART SM00862 155 231 2.1E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 SUPERFAMILY SSF52172 2 187 3.65E-29 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 6.0E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS25865 c3117e007c71bd69c7f82375dd831d03 238 SMART SM00448 2 112 3.6E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.6E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 124 137 4.6E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 171 4.6E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 193 4.6E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 Gene3D G3DSA:3.40.50.1000 4 33 0.097 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 241 35.816 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 Gene3D G3DSA:1.10.150.240 34 97 7.8E-22 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 SUPERFAMILY SSF56784 3 62 4.08E-57 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 SUPERFAMILY SSF56784 93 238 4.08E-57 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 210 2.1E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 Gene3D G3DSA:3.40.50.1000 98 240 9.2E-37 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 9.5E-92 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 210 2.9E-36 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15085 3910b6127b352ee2d1733825e4b57508 249 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 125 205 1.4E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS04210 6105e958e1fbc8da282f4c1d31f2b005 264 SUPERFAMILY SSF55895 30 257 1.7E-27 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CKQ55_RS04210 6105e958e1fbc8da282f4c1d31f2b005 264 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 145 156 - T 29-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 CKQ55_RS04210 6105e958e1fbc8da282f4c1d31f2b005 264 Gene3D G3DSA:3.90.730.10 27 264 2.8E-33 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CKQ55_RS04210 6105e958e1fbc8da282f4c1d31f2b005 264 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 72 79 - T 29-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CKQ55_RS04210 6105e958e1fbc8da282f4c1d31f2b005 264 Pfam PF00445 Ribonuclease T2 family 35 232 4.9E-13 T 29-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 1.2E-17 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 SUPERFAMILY SSF50331 235 350 1.63E-22 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 Pfam PF03459 TOBE domain 290 350 1.4E-15 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 Gene3D G3DSA:2.40.50.100 285 349 1.2E-20 T 29-03-2018 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 SMART SM00382 23 206 1.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 Gene3D G3DSA:3.40.50.300 16 284 2.2E-54 T 29-03-2018 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 Pfam PF00005 ABC transporter 20 156 2.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 8.3E-156 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CKQ55_RS03450 4e30c4e84be17648eb2462e3ba47efc1 352 SUPERFAMILY SSF52540 13 220 2.61E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 SUPERFAMILY SSF49584 146 231 1.14E-19 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 Gene3D G3DSA:2.60.40.10 153 236 1.3E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 151 3.8E-39 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 Gene3D G3DSA:2.60.40.10 34 149 3.1E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 PRINTS PR00969 Pili chaperone signature 78 99 8.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 PRINTS PR00969 Pili chaperone signature 168 183 8.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 PRINTS PR00969 Pili chaperone signature 107 124 8.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 PRINTS PR00969 Pili chaperone signature 34 43 8.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 PRINTS PR00969 Pili chaperone signature 133 148 8.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 228 4.6E-10 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS23055 114527a300fd546b4d2aa2c45b3dc63f 236 SUPERFAMILY SSF49354 33 151 2.88E-39 T 29-03-2018 IPR008962 PapD-like CKQ55_RS17360 97ba5fbcb5c5935f184ca2343c24d4d7 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 42.845 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CKQ55_RS17360 97ba5fbcb5c5935f184ca2343c24d4d7 129 SUPERFAMILY SSF51230 4 128 5.45E-45 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS17360 97ba5fbcb5c5935f184ca2343c24d4d7 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CKQ55_RS17360 97ba5fbcb5c5935f184ca2343c24d4d7 129 Pfam PF01597 Glycine cleavage H-protein 8 128 4.7E-49 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CKQ55_RS17360 97ba5fbcb5c5935f184ca2343c24d4d7 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 1.3E-58 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CKQ55_RS17360 97ba5fbcb5c5935f184ca2343c24d4d7 129 Gene3D G3DSA:2.40.50.100 6 129 1.9E-48 T 29-03-2018 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 Gene3D G3DSA:3.40.190.10 179 267 7.6E-7 T 29-03-2018 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 SUPERFAMILY SSF53850 93 292 8.87E-16 T 29-03-2018 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 SUPERFAMILY SSF46785 6 91 8.71E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 Pfam PF03466 LysR substrate binding domain 93 291 5.8E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 Gene3D G3DSA:3.40.190.10 90 178 7.0E-4 T 29-03-2018 CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 Gene3D G3DSA:1.10.10.10 1 86 1.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24240 58cfcf62b74c09d8603be1012f24c2b9 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 65 1.8E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04630 8e39873629d74ff5537690090852f3ae 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 209 1.7E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04630 8e39873629d74ff5537690090852f3ae 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 108 1.2E-27 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS04630 8e39873629d74ff5537690090852f3ae 221 Gene3D G3DSA:1.10.3720.10 2 217 7.1E-35 T 29-03-2018 CKQ55_RS04630 8e39873629d74ff5537690090852f3ae 221 SUPERFAMILY SSF161098 12 205 2.22E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS10740 3a44a780e573344caf5dabca7fdb1c74 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 7.4E-154 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS10740 3a44a780e573344caf5dabca7fdb1c74 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.3E-197 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS10740 3a44a780e573344caf5dabca7fdb1c74 433 PIRSF PIRSF004539 1 433 1.2E-180 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 8.4E-31 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.3E-126 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 SMART SM01400 4 121 5.7E-76 T 29-03-2018 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 Gene3D G3DSA:3.40.50.2020 1 156 8.5E-66 T 29-03-2018 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 SUPERFAMILY SSF53271 69 306 7.61E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 Gene3D G3DSA:3.40.50.2020 157 307 3.6E-42 T 29-03-2018 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.729 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CKQ55_RS24400 dbc2eee2e296a36d3ee84c79ce20845f 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 SUPERFAMILY SSF52540 320 505 2.48E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 SMART SM00382 322 487 3.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 SMART SM00382 29 205 1.7E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 Gene3D G3DSA:3.40.50.300 318 537 1.5E-32 T 29-03-2018 CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 Gene3D G3DSA:3.40.50.300 1 282 1.4E-40 T 29-03-2018 CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 SUPERFAMILY SSF52540 17 203 2.07E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 Pfam PF00005 ABC transporter 21 153 7.8E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27620 1b7ea72ddc7e96a1250e77cad9aaccee 570 Pfam PF00005 ABC transporter 320 443 1.2E-12 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS30675 c1f6bbd744e87b14a3082d2a4b4ce895 180 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 90 180 8.0E-12 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS30675 c1f6bbd744e87b14a3082d2a4b4ce895 180 Pfam PF03230 Antirestriction protein 92 180 7.0E-17 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Gene3D G3DSA:3.40.50.720 3 120 5.5E-18 T 29-03-2018 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 1.9E-18 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 3.2E-48 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 SUPERFAMILY SSF75615 114 201 5.89E-26 T 29-03-2018 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Gene3D G3DSA:3.30.160.110 121 148 1.2E-16 T 29-03-2018 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Gene3D G3DSA:3.40.1010.10 215 340 1.2E-34 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 PIRSF PIRSF036426 1 457 3.2E-202 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Pfam PF13241 Putative NAD(P)-binding 6 115 5.2E-25 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Gene3D G3DSA:1.10.8.210 151 209 5.2E-19 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 SUPERFAMILY SSF51735 2 112 3.03E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 6.7E-70 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 SUPERFAMILY SSF53790 215 456 2.36E-77 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.0E-89 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.3E-8 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.634 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS15095 80dffb3f87a52d7365baecdb91d886d5 457 Gene3D G3DSA:3.30.950.10 341 457 6.7E-38 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS16800 6ceb17dcd6f15b7abbf50adb2d251ca8 210 Gene3D G3DSA:3.90.79.10 1 209 1.0E-45 T 29-03-2018 CKQ55_RS16800 6ceb17dcd6f15b7abbf50adb2d251ca8 210 Pfam PF00293 NUDIX domain 59 180 1.2E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS16800 6ceb17dcd6f15b7abbf50adb2d251ca8 210 SUPERFAMILY SSF55811 4 208 2.3E-53 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS16800 6ceb17dcd6f15b7abbf50adb2d251ca8 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS16800 6ceb17dcd6f15b7abbf50adb2d251ca8 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 6.3E-82 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CKQ55_RS13365 3f7a687ca74be40f4e5cb519d1f5390f 477 SUPERFAMILY SSF55604 8 81 8.89E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS13365 3f7a687ca74be40f4e5cb519d1f5390f 477 Gene3D G3DSA:3.30.1360.60 6 83 1.8E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS13365 3f7a687ca74be40f4e5cb519d1f5390f 477 Pfam PF02378 Phosphotransferase system, EIIC 122 404 4.1E-31 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS13365 3f7a687ca74be40f4e5cb519d1f5390f 477 Pfam PF00367 phosphotransferase system, EIIB 11 43 4.5E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS13365 3f7a687ca74be40f4e5cb519d1f5390f 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS25670 5ca99bf4b5f80f8d8917eb45bdd89eff 450 SMART SM00267 278 448 8.1E-62 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS25670 5ca99bf4b5f80f8d8917eb45bdd89eff 450 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 444 1.3E-47 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS25670 5ca99bf4b5f80f8d8917eb45bdd89eff 450 SUPERFAMILY SSF55073 296 449 3.77E-47 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS25670 5ca99bf4b5f80f8d8917eb45bdd89eff 450 Gene3D G3DSA:3.30.70.270 274 449 1.2E-54 T 29-03-2018 CKQ55_RS25670 5ca99bf4b5f80f8d8917eb45bdd89eff 450 Pfam PF17158 Membrane-associated sensor, integral membrane domain 40 277 9.9E-74 T 29-03-2018 IPR033424 Membrane-associated sensor domain CKQ55_RS25670 5ca99bf4b5f80f8d8917eb45bdd89eff 450 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 290 447 4.8E-48 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS27090 c16636329736b25edcea52a471834ffe 149 Pfam PF01476 LysM domain 99 147 2.4E-12 T 29-03-2018 IPR018392 LysM domain CKQ55_RS27090 c16636329736b25edcea52a471834ffe 149 SUPERFAMILY SSF54106 97 147 2.22E-8 T 29-03-2018 IPR018392 LysM domain CKQ55_RS27090 c16636329736b25edcea52a471834ffe 149 SMART SM00257 98 147 1.7E-12 T 29-03-2018 IPR018392 LysM domain CKQ55_RS27090 c16636329736b25edcea52a471834ffe 149 Gene3D G3DSA:3.10.350.10 92 149 1.1E-16 T 29-03-2018 CKQ55_RS27090 c16636329736b25edcea52a471834ffe 149 Pfam PF04972 BON domain 26 90 5.6E-10 T 29-03-2018 IPR007055 BON domain CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 Gene3D G3DSA:3.40.190.10 180 265 1.2E-12 T 29-03-2018 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 SUPERFAMILY SSF53850 87 276 4.34E-27 T 29-03-2018 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 Gene3D G3DSA:3.40.190.10 87 179 2.0E-11 T 29-03-2018 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 SUPERFAMILY SSF46785 1 109 2.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 Gene3D G3DSA:1.10.10.10 1 84 3.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25070 82e8857c5df8a942990faba7328367cd 297 Pfam PF03466 LysR substrate binding domain 86 274 1.2E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 265 286 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 320 339 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 289 315 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 150 168 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 351 371 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 73 102 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 108 130 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 PRINTS PR00174 LacY proton/sugar symporter family signature 219 247 2.9E-99 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 69 83 - T 29-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 SUPERFAMILY SSF103473 9 405 7.32E-48 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 Gene3D G3DSA:1.20.1250.20 9 204 3.6E-23 T 29-03-2018 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 Pfam PF01306 LacY proton/sugar symporter 9 410 3.2E-195 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 Gene3D G3DSA:1.20.1250.20 211 418 9.7E-21 T 29-03-2018 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 11 406 2.9E-201 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS12520 2a96b26904d255e923981ddabe17dac7 421 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 285 299 - T 29-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 CKQ55_RS19860 3d8ba43991c9ad4e80d079a6b78cdfc1 108 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 25 100 1.7E-9 T 29-03-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein CKQ55_RS19860 3d8ba43991c9ad4e80d079a6b78cdfc1 108 PIRSF PIRSF034456 1 107 2.5E-56 T 29-03-2018 IPR017028 Uncharacterised conserved protein UCP034456 CKQ55_RS14060 2321ec2ad6648861461aa8813f779a5a 70 Pfam PF01848 Hok/gef family 25 66 1.1E-22 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS14060 2321ec2ad6648861461aa8813f779a5a 70 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 CKQ55_RS14060 2321ec2ad6648861461aa8813f779a5a 70 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 21 66 6.0E-15 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS14060 2321ec2ad6648861461aa8813f779a5a 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 6.7E-14 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS14060 2321ec2ad6648861461aa8813f779a5a 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 6.7E-14 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS06220 88a4c6b1a6558108d13f17edcd19aa87 105 PIRSF PIRSF003113 1 100 1.9E-31 T 29-03-2018 IPR002634 BolA protein CKQ55_RS06220 88a4c6b1a6558108d13f17edcd19aa87 105 SUPERFAMILY SSF82657 1 89 5.89E-30 T 29-03-2018 IPR002634 BolA protein CKQ55_RS06220 88a4c6b1a6558108d13f17edcd19aa87 105 Pfam PF01722 BolA-like protein 11 84 1.0E-27 T 29-03-2018 IPR002634 BolA protein CKQ55_RS06220 88a4c6b1a6558108d13f17edcd19aa87 105 Gene3D G3DSA:3.30.300.90 1 91 9.9E-27 T 29-03-2018 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 54.208 T 29-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 Gene3D G3DSA:3.50.50.60 1 430 1.9E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.8E-73 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 SUPERFAMILY SSF51905 107 271 4.14E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 SUPERFAMILY SSF51905 1 54 4.14E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 SUPERFAMILY SSF51905 359 419 4.14E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24120 aa6e24266ab029fbf93d03a075bbdb92 432 SUPERFAMILY SSF54373 269 359 2.75E-16 T 29-03-2018 CKQ55_RS14990 f1b3a990e3812964b822ee1ef4b4d22a 697 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 101 686 1.5E-273 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CKQ55_RS14990 f1b3a990e3812964b822ee1ef4b4d22a 697 SUPERFAMILY SSF51445 128 561 1.37E-145 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS14990 f1b3a990e3812964b822ee1ef4b4d22a 697 SUPERFAMILY SSF51445 600 687 1.37E-145 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS14990 f1b3a990e3812964b822ee1ef4b4d22a 697 Pfam PF02446 4-alpha-glucanotransferase 149 665 1.1E-130 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CKQ55_RS14990 f1b3a990e3812964b822ee1ef4b4d22a 697 Gene3D G3DSA:3.20.20.80 139 687 7.7E-157 T 29-03-2018 CKQ55_RS19660 12b62411ef8af224f52142f7bda072a1 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.5E-19 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CKQ55_RS08935 6ae698739eae90ef10bfc48674a41b4c 324 Gene3D G3DSA:1.10.10.60 246 320 0.0024 T 29-03-2018 CKQ55_RS08935 6ae698739eae90ef10bfc48674a41b4c 324 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 271 1.1E-48 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS08935 6ae698739eae90ef10bfc48674a41b4c 324 Pfam PF04754 Putative transposase, YhgA-like 8 209 1.1E-86 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 SMART SM00490 532 615 2.1E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 Pfam PF00271 Helicase conserved C-terminal domain 513 615 6.0E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 SMART SM00487 93 294 5.8E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 Gene3D G3DSA:3.40.50.10810 75 321 2.1E-31 T 29-03-2018 CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 SUPERFAMILY SSF52540 213 282 2.33E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 SUPERFAMILY SSF52540 491 655 2.33E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 Gene3D G3DSA:3.40.50.300 490 653 1.1E-25 T 29-03-2018 CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 Pfam PF00176 SNF2 family N-terminal domain 117 286 8.6E-19 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CKQ55_RS30435 7bcc58bb5271cdb90a28ce0f31c7f143 935 SUPERFAMILY SSF52540 74 290 5.96E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25375 395ca100650c160d634fc717a9b54a4d 183 SUPERFAMILY SSF56349 2 178 5.59E-43 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS25375 395ca100650c160d634fc717a9b54a4d 183 Pfam PF00589 Phage integrase family 5 174 9.8E-43 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS25375 395ca100650c160d634fc717a9b54a4d 183 Gene3D G3DSA:1.10.443.10 4 183 1.2E-36 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS27590 2e986f6d0b711d936fdef5b271beda01 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 1.3E-58 T 29-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 CKQ55_RS27590 2e986f6d0b711d936fdef5b271beda01 143 SUPERFAMILY SSF82784 1 141 2.62E-38 T 29-03-2018 IPR003718 OsmC/Ohr family CKQ55_RS27590 2e986f6d0b711d936fdef5b271beda01 143 Gene3D G3DSA:3.30.300.20 2 142 5.6E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS27590 2e986f6d0b711d936fdef5b271beda01 143 Pfam PF02566 OsmC-like protein 44 138 9.5E-18 T 29-03-2018 IPR003718 OsmC/Ohr family CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 SUPERFAMILY SSF51735 1 145 4.6E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 29-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 PIRSF PIRSF000102 1 309 8.8E-61 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 SUPERFAMILY SSF56327 146 311 1.85E-42 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 Gene3D G3DSA:3.90.110.10 148 312 1.0E-43 T 29-03-2018 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 60.482 T 29-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.3E-51 T 29-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 Gene3D G3DSA:3.40.50.720 2 147 3.8E-40 T 29-03-2018 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 2.0E-139 T 29-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CKQ55_RS15730 65387a05d2232962597e0b471398b867 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.7E-46 T 29-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 54 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 SUPERFAMILY SSF56935 47 753 1.57E-130 T 29-03-2018 CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 736 753 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 753 8.2E-119 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 Gene3D G3DSA:2.40.170.20 190 753 1.3E-81 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 Pfam PF00593 TonB dependent receptor 288 750 5.8E-53 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 176 3.4E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS11055 3def993bd9aedfb08aff9c500adc02b8 753 Gene3D G3DSA:2.170.130.10 56 189 1.5E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 SUPERFAMILY SSF52922 492 619 1.02E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 7.7E-26 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Gene3D G3DSA:3.40.50.970 3 296 1.6E-73 T 29-03-2018 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.182 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Gene3D G3DSA:3.40.50.920 495 620 5.0E-34 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 SUPERFAMILY SSF52518 317 504 2.88E-58 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 2.3E-39 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 SUPERFAMILY SSF52518 10 199 8.15E-76 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 SUPERFAMILY SSF52518 243 381 8.15E-76 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 SMART SM00861 319 484 7.5E-69 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Gene3D G3DSA:3.40.50.970 297 485 4.6E-63 T 29-03-2018 CKQ55_RS06350 f2a6445766df907ca2f13fd20b8e4858 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 1.6E-115 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 SUPERFAMILY SSF63380 93 199 1.11E-32 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 Pfam PF00677 Lumazine binding domain 100 185 6.9E-23 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 Pfam PF00677 Lumazine binding domain 3 87 1.2E-21 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 Gene3D G3DSA:2.40.30.20 94 192 5.9E-28 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 1.9E-86 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 SUPERFAMILY SSF63380 1 93 1.19E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 Gene3D G3DSA:2.40.30.20 1 93 1.7E-27 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS25565 e1da6827de82952884c783a2155cfa1e 211 PIRSF PIRSF000498 1 211 1.0E-74 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.3E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 SMART SM00342 233 316 2.6E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 Gene3D G3DSA:1.10.10.60 273 318 5.2E-14 T 29-03-2018 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 SUPERFAMILY SSF46689 270 317 1.79E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27125 be506a5e18b90e70da52f21d6ca12793 319 Gene3D G3DSA:1.10.10.60 219 272 0.0072 T 29-03-2018 CKQ55_RS27535 371a3777f8a213e5a9e87c25954407de 387 Gene3D G3DSA:1.20.1250.20 4 194 4.6E-25 T 29-03-2018 CKQ55_RS27535 371a3777f8a213e5a9e87c25954407de 387 Pfam PF07690 Major Facilitator Superfamily 12 194 5.2E-22 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS27535 371a3777f8a213e5a9e87c25954407de 387 Gene3D G3DSA:1.20.1250.20 195 380 1.5E-8 T 29-03-2018 CKQ55_RS27535 371a3777f8a213e5a9e87c25954407de 387 SUPERFAMILY SSF103473 7 380 2.49E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 Gene3D G3DSA:1.10.10.10 164 229 1.9E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 SUPERFAMILY SSF51206 36 152 3.54E-25 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 Gene3D G3DSA:2.60.120.10 18 163 6.6E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 SUPERFAMILY SSF46785 161 231 8.77E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 Pfam PF00027 Cyclic nucleotide-binding domain 45 126 8.3E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 Pfam PF13545 Crp-like helix-turn-helix domain 163 229 1.2E-8 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12050 959dbdfe9ef347155879073146c85097 234 SMART SM00100 25 143 1.4E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CKQ55_RS13675 4463f696397047ef05ebe2f87a9b6a12 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 4.5E-34 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 CKQ55_RS13675 4463f696397047ef05ebe2f87a9b6a12 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.5E-136 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 CKQ55_RS13675 4463f696397047ef05ebe2f87a9b6a12 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.6E-43 T 29-03-2018 IPR013527 YicC-like, N-terminal CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 SUPERFAMILY SSF46785 4 110 8.18E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 Gene3D G3DSA:3.40.190.10 179 262 1.4E-9 T 29-03-2018 CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 Gene3D G3DSA:1.10.10.10 2 83 1.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 3.0E-113 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 Gene3D G3DSA:3.40.190.10 92 178 1.0E-35 T 29-03-2018 CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.351 T 29-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 Pfam PF03466 LysR substrate binding domain 93 287 1.4E-13 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 SUPERFAMILY SSF53850 92 289 5.79E-20 T 29-03-2018 CKQ55_RS17305 029db3a50499eceb3c0fbbf2398628e2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04135 856bae7cc73d1832b3d470aeaf6bdf04 155 Gene3D G3DSA:3.40.1280.10 2 154 2.9E-49 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS04135 856bae7cc73d1832b3d470aeaf6bdf04 155 SUPERFAMILY SSF75217 2 153 1.94E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS04135 856bae7cc73d1832b3d470aeaf6bdf04 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 2.1E-46 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS04135 856bae7cc73d1832b3d470aeaf6bdf04 155 PIRSF PIRSF004505 1 154 1.5E-40 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS04135 856bae7cc73d1832b3d470aeaf6bdf04 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.217 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS04135 856bae7cc73d1832b3d470aeaf6bdf04 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 2.7E-85 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 SUPERFAMILY SSF46785 1 112 1.71E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 Gene3D G3DSA:1.10.10.10 3 87 3.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 Gene3D G3DSA:3.40.190.10 88 184 1.6E-16 T 29-03-2018 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 Pfam PF03466 LysR substrate binding domain 90 297 3.5E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 SUPERFAMILY SSF53850 91 297 2.02E-24 T 29-03-2018 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 Gene3D G3DSA:3.40.190.10 185 266 8.2E-10 T 29-03-2018 CKQ55_RS06885 76de362b9efd2fe7ceabed4a7a4a7a17 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.7E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 Gene3D G3DSA:3.50.30.20 2 151 3.0E-63 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 SUPERFAMILY SSF52317 153 378 2.29E-64 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 Gene3D G3DSA:3.40.50.880 152 379 5.7E-69 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.5E-40 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.5E-40 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.5E-40 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.5E-40 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.5E-40 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.852 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 SUPERFAMILY SSF52021 3 144 2.88E-57 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 6.5E-50 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 SMART SM01097 3 133 4.4E-91 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.1E-153 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.7E-52 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 29-03-2018 CKQ55_RS08425 9e2c40aea914a712c9812365572b2127 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 29-03-2018 CKQ55_RS27630 27df68fcc72f7a1605cc8bfb9a8a63d3 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 2.3E-35 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS27630 27df68fcc72f7a1605cc8bfb9a8a63d3 159 SUPERFAMILY SSF141452 3 155 5.75E-35 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS27630 27df68fcc72f7a1605cc8bfb9a8a63d3 159 Gene3D G3DSA:2.30.110.20 1 158 4.8E-41 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS27630 27df68fcc72f7a1605cc8bfb9a8a63d3 159 Pfam PF05638 Type VI secretion system effector, Hcp 8 142 2.5E-29 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.637 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 2.8E-53 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 Gene3D G3DSA:4.10.520.10 1 93 4.7E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 Pfam PF00216 Bacterial DNA-binding protein 1 91 3.0E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 SUPERFAMILY SSF47729 1 91 6.92E-30 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS02100 04985c9906c0be53847c4e6e463ef0cf 95 SMART SM00411 1 91 1.6E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 PIRSF PIRSF001362 1 434 5.3E-230 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 Gene3D G3DSA:3.20.20.60 1 417 2.1E-155 T 29-03-2018 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 SUPERFAMILY SSF51621 4 417 2.2E-157 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 8.0E-93 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 9.4E-122 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 Pfam PF00463 Isocitrate lyase family 256 434 1.9E-50 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CKQ55_RS11385 e5c09b786f87b181c2385a0a76560f1f 434 Pfam PF00463 Isocitrate lyase family 8 255 6.1E-62 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 SUPERFAMILY SSF46689 338 388 2.82E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 Gene3D G3DSA:1.10.10.60 281 340 5.6E-8 T 29-03-2018 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 SUPERFAMILY SSF53822 10 298 2.36E-47 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 Gene3D G3DSA:3.40.50.2300 108 280 3.1E-31 T 29-03-2018 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 1.1E-36 T 29-03-2018 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 Pfam PF12833 Helix-turn-helix domain 309 386 4.0E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 Gene3D G3DSA:3.40.50.2300 1 107 3.5E-8 T 29-03-2018 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 SUPERFAMILY SSF46689 285 331 4.66E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 3.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 3.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 SMART SM00342 301 384 5.9E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS14005 b63bedcb539bf022bec8dfab59f3435e 392 Gene3D G3DSA:1.10.10.60 341 389 6.3E-13 T 29-03-2018 CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 54 5.0E-10 T 29-03-2018 CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 SUPERFAMILY SSF143414 3 91 1.27E-23 T 29-03-2018 CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 Pfam PF00936 BMC domain 4 79 3.0E-21 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 Gene3D G3DSA:1.10.10.10 101 158 6.4E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 104 157 5.7E-32 T 29-03-2018 IPR032298 Ethanolamine utilization protein EutK, C-terminal CKQ55_RS20535 7f7522a8c51f81ef93ac959bac51babe 160 SMART SM00877 3 79 1.3E-25 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09645 f28dc3f68eb6dda14fc843e9ac945671 345 SUPERFAMILY SSF49401 33 167 9.44E-5 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS09645 f28dc3f68eb6dda14fc843e9ac945671 345 SUPERFAMILY SSF49401 191 345 1.34E-26 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS09645 f28dc3f68eb6dda14fc843e9ac945671 345 Gene3D G3DSA:2.60.40.1090 32 169 2.0E-5 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS09645 f28dc3f68eb6dda14fc843e9ac945671 345 Gene3D G3DSA:2.60.40.1090 187 345 2.2E-32 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS09645 f28dc3f68eb6dda14fc843e9ac945671 345 Pfam PF00419 Fimbrial protein 190 344 4.2E-17 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 PRINTS PR00721 Stomatin signature 171 192 8.0E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 PRINTS PR00721 Stomatin signature 73 94 8.0E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 PRINTS PR00721 Stomatin signature 152 170 8.0E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 PRINTS PR00721 Stomatin signature 128 151 8.0E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 PRINTS PR00721 Stomatin signature 108 125 8.0E-27 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 Pfam PF01145 SPFH domain / Band 7 family 22 202 3.0E-33 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 29-03-2018 IPR018080 Band 7/stomatin-like, conserved site CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 SUPERFAMILY SSF117892 49 183 1.7E-41 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS05805 556939c2174d5b0984370b38b9b3059c 305 SMART SM00244 18 176 9.7E-59 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS06430 37d2a9f8379845a8d629cb683b74c1a9 110 SMART SM01323 19 102 4.8E-37 T 29-03-2018 IPR003849 Preprotein translocase YajC CKQ55_RS06430 37d2a9f8379845a8d629cb683b74c1a9 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.1E-26 T 29-03-2018 IPR003849 Preprotein translocase YajC CKQ55_RS06430 37d2a9f8379845a8d629cb683b74c1a9 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 3.0E-34 T 29-03-2018 IPR003849 Preprotein translocase YajC CKQ55_RS06430 37d2a9f8379845a8d629cb683b74c1a9 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 29-03-2018 IPR003849 Preprotein translocase YajC CKQ55_RS06430 37d2a9f8379845a8d629cb683b74c1a9 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 29-03-2018 IPR003849 Preprotein translocase YajC CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 SMART SM00345 7 66 2.6E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 Gene3D G3DSA:3.40.640.10 122 371 7.3E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 Pfam PF00155 Aminotransferase class I and II 120 456 1.6E-33 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 Gene3D G3DSA:3.90.1150.10 372 469 4.0E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 SUPERFAMILY SSF53383 60 461 1.03E-91 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 Gene3D G3DSA:1.10.10.10 1 74 3.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 SUPERFAMILY SSF46785 1 70 3.69E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09245 580fff79ae3ed51463098e475bccc32d 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15850 93bd2a7ee3eaa2183f923b98b3a6e41b 155 SUPERFAMILY SSF51197 1 153 1.35E-40 T 29-03-2018 CKQ55_RS15850 93bd2a7ee3eaa2183f923b98b3a6e41b 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 3.3E-53 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS15850 93bd2a7ee3eaa2183f923b98b3a6e41b 155 Gene3D G3DSA:2.60.120.370 1 153 1.3E-41 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS15850 93bd2a7ee3eaa2183f923b98b3a6e41b 155 Pfam PF04074 Domain of unknown function (DUF386) 1 149 3.5E-38 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Gene3D G3DSA:3.30.2090.10 182 268 5.7E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Gene3D G3DSA:3.30.70.1430 40 144 8.8E-31 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Gene3D G3DSA:1.20.1640.10 820 1014 3.2E-40 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Gene3D G3DSA:1.20.1640.10 269 493 2.2E-32 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82714 184 266 8.11E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Gene3D G3DSA:3.30.70.1430 559 706 2.2E-12 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82714 714 790 2.22E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Gene3D G3DSA:3.30.2090.10 710 791 6.6E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82866 794 1015 2.35E-44 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82866 292 490 7.46E-37 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82693 136 182 4.45E-19 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82693 270 325 4.45E-19 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 Pfam PF00873 AcrB/AcrD/AcrF family 3 1012 4.9E-164 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 SUPERFAMILY SSF82693 40 135 2.44E-21 T 29-03-2018 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23295 9a64bfed556978f1809ea4103073d220 1020 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS25730 e945f9ec5a44b7456e40a631ccc8ba6f 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.407 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CKQ55_RS25730 e945f9ec5a44b7456e40a631ccc8ba6f 350 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 2.5E-106 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CKQ55_RS25730 e945f9ec5a44b7456e40a631ccc8ba6f 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 7.5E-146 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.5E-116 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 Gene3D G3DSA:1.10.10.10 126 228 1.7E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.4E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 Gene3D G3DSA:3.40.50.2300 2 125 5.5E-37 T 29-03-2018 CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 SMART SM00448 3 116 3.2E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 SUPERFAMILY SSF52172 3 184 2.41E-43 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 Pfam PF00072 Response regulator receiver domain 5 117 5.4E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS06505 955060d18685a2ad250f3f0f838fa405 229 SMART SM00862 150 225 3.1E-27 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS01325 5c69bc83672a8acb1b9b2ba725eef4b5 128 SUPERFAMILY SSF54427 2 127 9.99E-40 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS01325 5c69bc83672a8acb1b9b2ba725eef4b5 128 Pfam PF11533 Protein of unknown function (DUF3225) 6 127 7.7E-62 T 29-03-2018 IPR024507 Protein of unknown function DUF3225 CKQ55_RS01325 5c69bc83672a8acb1b9b2ba725eef4b5 128 Gene3D G3DSA:3.10.450.50 4 128 1.9E-22 T 29-03-2018 CKQ55_RS02470 b011179a93a02e5cb6a9f01c549fb8e2 197 Gene3D G3DSA:1.20.144.10 2 177 1.9E-26 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS02470 b011179a93a02e5cb6a9f01c549fb8e2 197 SUPERFAMILY SSF48317 2 195 3.79E-35 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS02470 b011179a93a02e5cb6a9f01c549fb8e2 197 SMART SM00014 57 164 1.0E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS02470 b011179a93a02e5cb6a9f01c549fb8e2 197 Pfam PF01569 PAP2 superfamily 58 164 3.2E-13 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS03060 aafc22dcc5739c8a1339b058ba2b1a92 260 Pfam PF13350 Tyrosine phosphatase family 12 259 5.8E-60 T 29-03-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CKQ55_RS03060 aafc22dcc5739c8a1339b058ba2b1a92 260 SUPERFAMILY SSF52799 11 258 2.83E-45 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CKQ55_RS03060 aafc22dcc5739c8a1339b058ba2b1a92 260 Gene3D G3DSA:3.90.190.10 25 200 5.9E-17 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CKQ55_RS29705 340c82830eb06b64d204708c47df745a 441 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 440 1.2E-227 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CKQ55_RS29705 340c82830eb06b64d204708c47df745a 441 SUPERFAMILY SSF55909 3 441 5.1E-202 T 29-03-2018 CKQ55_RS29705 340c82830eb06b64d204708c47df745a 441 Gene3D G3DSA:3.75.10.20 2 441 1.8E-215 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CKQ55_RS29705 340c82830eb06b64d204708c47df745a 441 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 57.282 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CKQ55_RS29705 340c82830eb06b64d204708c47df745a 441 Pfam PF04996 Succinylarginine dihydrolase 3 440 8.7E-209 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 Gene3D G3DSA:3.40.190.10 178 268 1.8E-24 T 29-03-2018 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 Gene3D G3DSA:1.10.10.10 3 81 4.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 Pfam PF03466 LysR substrate binding domain 90 292 2.5E-50 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.8E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 Gene3D G3DSA:3.40.190.10 90 177 6.7E-22 T 29-03-2018 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 SUPERFAMILY SSF53850 92 297 2.6E-50 T 29-03-2018 CKQ55_RS01560 2bae81e41a9c307cf135bdc1b59e1161 308 SUPERFAMILY SSF46785 2 113 1.62E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28920 96dd797fe9dd2dbccb325a8cb621006f 444 Gene3D G3DSA:1.20.58.60 106 444 0.02 T 29-03-2018 CKQ55_RS28920 96dd797fe9dd2dbccb325a8cb621006f 444 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 112 5.1E-19 T 29-03-2018 IPR010657 ImpA, N-terminal CKQ55_RS28920 96dd797fe9dd2dbccb325a8cb621006f 444 Pfam PF12486 Type VI secretion system, EvfB, or VasL 295 439 8.8E-51 T 29-03-2018 IPR021069 ImpA, C-terminal CKQ55_RS01080 3a700ae981d8176308f4383725f625e4 131 Pfam PF07007 Lysozyme inhibitor LprI 22 108 8.8E-19 T 29-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Pfam PF02824 TGS domain 4 61 7.2E-13 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 7.9E-51 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 8.7E-55 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 8.7E-55 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 8.7E-55 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 8.7E-55 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 8.7E-55 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Pfam PF03129 Anticodon binding domain 541 630 6.8E-23 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.7E-247 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 SUPERFAMILY SSF55681 243 525 1.81E-97 T 29-03-2018 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Gene3D G3DSA:3.40.50.800 532 642 1.4E-29 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 SUPERFAMILY SSF52954 530 636 1.51E-33 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 SUPERFAMILY SSF55186 63 241 5.1E-65 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.1E-14 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 SUPERFAMILY SSF81271 3 61 3.27E-16 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.169 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Gene3D G3DSA:3.10.20.30 1 64 2.5E-19 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Gene3D G3DSA:3.30.930.10 223 531 2.1E-121 T 29-03-2018 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Gene3D G3DSA:3.30.980.10 146 222 4.1E-17 T 29-03-2018 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 Gene3D G3DSA:3.30.980.10 65 145 2.2E-22 T 29-03-2018 CKQ55_RS24775 c4b45b3714285135144980bd4e9c9b1c 642 SMART SM00863 170 219 1.4E-19 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 Gene3D G3DSA:3.40.50.80 94 237 1.9E-30 T 29-03-2018 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 299 307 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 Pfam PF00175 Oxidoreductase NAD-binding domain 118 225 7.2E-19 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 Gene3D G3DSA:2.40.30.10 1 93 2.4E-19 T 29-03-2018 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 267 342 2.3E-16 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 SUPERFAMILY SSF54292 234 349 2.16E-28 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 Gene3D G3DSA:3.10.20.30 238 356 1.3E-31 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 Pfam PF00970 Oxidoreductase FAD-binding domain 7 105 1.2E-11 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 SUPERFAMILY SSF63380 2 107 4.92E-23 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 9.9E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 9.9E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 9.9E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 1.3E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 1.3E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 1.3E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 1.3E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 1.3E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 SUPERFAMILY SSF52343 94 242 1.83E-34 T 29-03-2018 CKQ55_RS28325 18ff36d7db525a15b60d277dd0c77b22 356 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 351 7.3E-158 T 29-03-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 Pfam PF02541 Ppx/GppA phosphatase family 20 300 2.1E-99 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 Gene3D G3DSA:3.30.420.40 1 119 6.6E-40 T 29-03-2018 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 SUPERFAMILY SSF109604 306 493 7.53E-43 T 29-03-2018 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 493 54.758 T 29-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 Gene3D G3DSA:3.30.420.150 120 298 4.0E-34 T 29-03-2018 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 SUPERFAMILY SSF53067 6 127 4.21E-37 T 29-03-2018 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 SUPERFAMILY SSF53067 131 299 1.12E-40 T 29-03-2018 CKQ55_RS12010 3ad77b975162e816d8a5b25dcb969c4d 495 PIRSF PIRSF001267 1 495 1.1E-182 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CKQ55_RS06665 9f20d7a0d5da22450b67e88220438341 275 Gene3D G3DSA:1.10.3720.10 21 273 5.6E-32 T 29-03-2018 CKQ55_RS06665 9f20d7a0d5da22450b67e88220438341 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 2.8E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06665 9f20d7a0d5da22450b67e88220438341 275 SUPERFAMILY SSF161098 75 258 3.14E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Pfam PF05193 Peptidase M16 inactive domain 681 856 4.7E-12 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Pfam PF05193 Peptidase M16 inactive domain 215 392 1.0E-16 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Gene3D G3DSA:3.30.830.10 272 502 1.9E-57 T 29-03-2018 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Gene3D G3DSA:3.30.830.10 503 739 2.3E-29 T 29-03-2018 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 SUPERFAMILY SSF63411 504 729 6.98E-47 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 1.3E-38 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 SUPERFAMILY SSF63411 736 957 2.44E-44 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 SUPERFAMILY SSF63411 265 501 2.93E-65 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 SUPERFAMILY SSF63411 33 263 1.41E-51 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Gene3D G3DSA:3.30.830.10 22 268 1.9E-67 T 29-03-2018 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Gene3D G3DSA:3.30.830.10 740 955 7.7E-28 T 29-03-2018 CKQ55_RS18140 bea896b0c74ad414b864db5ee61626fe 961 Pfam PF16187 Middle or third domain of peptidase_M16 400 675 6.4E-53 T 29-03-2018 IPR032632 Peptidase M16, middle/third domain CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 356 550 5.9E-23 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 SUPERFAMILY SSF55816 355 597 7.06E-40 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 Gene3D G3DSA:3.60.21.10 13 344 3.7E-78 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 SUPERFAMILY SSF56300 19 353 4.52E-87 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 9.9E-14 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 29-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 Gene3D G3DSA:3.90.780.10 345 605 1.6E-51 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 PRINTS PR01607 Apyrase family signature 243 266 8.4E-33 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 PRINTS PR01607 Apyrase family signature 530 549 8.4E-33 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 PRINTS PR01607 Apyrase family signature 283 303 8.4E-33 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 PRINTS PR01607 Apyrase family signature 22 40 8.4E-33 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 PRINTS PR01607 Apyrase family signature 215 232 8.4E-33 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS10330 90678ce0e7aacbfafd51785b5b16aa6a 647 PRINTS PR01607 Apyrase family signature 428 451 8.4E-33 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS15355 ad144132a2d1365c3117af3fa157e542 63 Gene3D G3DSA:1.10.287.310 1 63 1.9E-22 T 29-03-2018 CKQ55_RS15355 ad144132a2d1365c3117af3fa157e542 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.849 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15355 ad144132a2d1365c3117af3fa157e542 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.6E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15355 ad144132a2d1365c3117af3fa157e542 63 SUPERFAMILY SSF46561 1 61 5.23E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15355 ad144132a2d1365c3117af3fa157e542 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.9E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15355 ad144132a2d1365c3117af3fa157e542 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 29-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS26925 ef32d66ed672cc52a531d5d1ea77a0da 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 2 141 1.3E-29 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS26925 ef32d66ed672cc52a531d5d1ea77a0da 147 SUPERFAMILY SSF55804 2 141 1.01E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS26925 ef32d66ed672cc52a531d5d1ea77a0da 147 Gene3D G3DSA:3.40.930.10 1 143 1.1E-32 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS26925 ef32d66ed672cc52a531d5d1ea77a0da 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 1.1E-135 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.2E-132 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS23520 82cdfc320e75a4c7aedfa9d3f7cd131f 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.9E-88 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 29-03-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 1.1E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 1.1E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 1.1E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 1.1E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 SUPERFAMILY SSF51338 2 177 5.52E-64 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 57.075 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 2.9E-55 T 29-03-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 Gene3D G3DSA:3.20.20.140 143 421 5.8E-165 T 29-03-2018 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 Gene3D G3DSA:3.20.20.140 422 553 3.3E-43 T 29-03-2018 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 Pfam PF01979 Amidohydrolase family 125 453 3.8E-84 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 SUPERFAMILY SSF51338 422 477 1.38E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 29-03-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 SUPERFAMILY SSF51556 130 431 1.15E-197 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 SUPERFAMILY SSF51556 480 567 1.15E-197 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 Gene3D G3DSA:2.30.40.10 65 142 1.7E-17 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS16680 8bb00fbac853a840ef69a24f37c6d6cf 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 1.8E-293 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS25800 3dff9490f8e5298035bb6bafd45f845f 390 Pfam PF00155 Aminotransferase class I and II 30 380 1.2E-52 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS25800 3dff9490f8e5298035bb6bafd45f845f 390 Gene3D G3DSA:3.40.640.10 42 274 2.1E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS25800 3dff9490f8e5298035bb6bafd45f845f 390 SUPERFAMILY SSF53383 1 388 5.85E-89 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS25800 3dff9490f8e5298035bb6bafd45f845f 390 Gene3D G3DSA:3.90.1150.10 275 389 3.8E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS25800 3dff9490f8e5298035bb6bafd45f845f 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 7.5E-115 T 29-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CKQ55_RS22310 bc60b25bf3289b43ac2d90614927105b 165 Hamap MF_04109 Endolysin. 1 165 38.071 T 29-03-2018 IPR034691 Endolysin lambda type GO:0003796|GO:0009253|GO:0019076|GO:0044659 CKQ55_RS22310 bc60b25bf3289b43ac2d90614927105b 165 Pfam PF00959 Phage lysozyme 34 152 2.4E-19 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CKQ55_RS22310 bc60b25bf3289b43ac2d90614927105b 165 Gene3D G3DSA:1.10.530.10 3 165 7.1E-47 T 29-03-2018 CKQ55_RS22310 bc60b25bf3289b43ac2d90614927105b 165 SUPERFAMILY SSF53955 6 162 3.54E-46 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS23605 4164e6d9925a208275016f8740bb6fb6 527 Gene3D G3DSA:1.20.1250.20 233 453 5.3E-10 T 29-03-2018 CKQ55_RS23605 4164e6d9925a208275016f8740bb6fb6 527 Pfam PF13347 MFS/sugar transport protein 13 451 2.4E-53 T 29-03-2018 CKQ55_RS23605 4164e6d9925a208275016f8740bb6fb6 527 SUPERFAMILY SSF103473 10 445 9.55E-32 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23605 4164e6d9925a208275016f8740bb6fb6 527 Gene3D G3DSA:1.20.1250.20 2 223 3.8E-20 T 29-03-2018 CKQ55_RS17070 b31f63a5c550d78cbfe3f3cf1a8acc7f 361 Gene3D G3DSA:1.10.530.10 184 358 1.2E-34 T 29-03-2018 CKQ55_RS17070 b31f63a5c550d78cbfe3f3cf1a8acc7f 361 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 2 360 64.158 T 29-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 CKQ55_RS17070 b31f63a5c550d78cbfe3f3cf1a8acc7f 361 Pfam PF11873 Domain of unknown function (DUF3393) 4 193 3.3E-76 T 29-03-2018 IPR024570 Murein transglycosylase-C, N-terminal CKQ55_RS17070 b31f63a5c550d78cbfe3f3cf1a8acc7f 361 Pfam PF01464 Transglycosylase SLT domain 198 320 5.0E-31 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS17070 b31f63a5c550d78cbfe3f3cf1a8acc7f 361 SUPERFAMILY SSF53955 193 359 7.51E-36 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS17070 b31f63a5c550d78cbfe3f3cf1a8acc7f 361 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 215 243 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Gene3D G3DSA:2.30.42.10 262 366 8.0E-27 T 29-03-2018 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 5.0E-31 T 29-03-2018 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 3.0E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Gene3D G3DSA:2.40.10.10 29 138 9.2E-33 T 29-03-2018 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 SUPERFAMILY SSF50156 383 454 3.29E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Gene3D G3DSA:2.30.42.10 367 455 8.2E-16 T 29-03-2018 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 SMART SM00228 267 349 8.1E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 SMART SM00228 374 447 1.4E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Gene3D G3DSA:2.40.10.10 139 257 7.8E-41 T 29-03-2018 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 Pfam PF13180 PDZ domain 289 358 9.9E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 1.2E-158 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 SUPERFAMILY SSF50156 249 358 3.59E-21 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 5.7E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 5.7E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 5.7E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 5.7E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 5.7E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 5.7E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 SUPERFAMILY SSF50494 89 276 2.7E-62 T 29-03-2018 IPR009003 Peptidase S1, PA clan CKQ55_RS15785 aa01b744672087e63164300af57374aa 455 SUPERFAMILY SSF50494 20 60 2.7E-62 T 29-03-2018 IPR009003 Peptidase S1, PA clan CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 Pfam PF13533 Biotin-lipoyl like 69 104 2.9E-6 T 29-03-2018 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 Pfam PF13437 HlyD family secretion protein 264 355 2.3E-10 T 29-03-2018 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 ProSitePatterns PS00543 HlyD family secretion proteins signature. 390 412 - T 29-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 333 8.1E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 8.1E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 8.1E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 Gene3D G3DSA:2.40.50.100 68 174 4.9E-9 T 29-03-2018 CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 SUPERFAMILY SSF51230 67 105 4.36E-6 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS10690 752d1144f82b750d98902e9a8384f2ab 428 Gene3D G3DSA:2.40.50.100 261 380 7.4E-5 T 29-03-2018 CKQ55_RS09985 eaa2ead0c4036c1533d1f72dfb61fec0 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 1.9E-248 T 29-03-2018 IPR033186 Helicase HerA-like C-terminal CKQ55_RS09985 eaa2ead0c4036c1533d1f72dfb61fec0 500 SUPERFAMILY SSF52540 17 369 2.73E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09985 eaa2ead0c4036c1533d1f72dfb61fec0 500 Gene3D G3DSA:3.40.50.300 9 437 8.5E-28 T 29-03-2018 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 SUPERFAMILY SSF51556 57 415 5.78E-84 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 Gene3D G3DSA:2.30.40.10 2 65 7.3E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 Pfam PF07969 Amidohydrolase family 317 459 5.5E-19 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 Pfam PF07969 Amidohydrolase family 45 251 1.4E-22 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 Gene3D G3DSA:3.20.20.140 66 396 2.5E-73 T 29-03-2018 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 Gene3D G3DSA:2.30.40.10 397 462 2.8E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 SUPERFAMILY SSF51338 4 71 7.41E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS09045 9da3b7328d152ac50c0f89e141b48c61 479 SUPERFAMILY SSF51338 417 476 9.3E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS23625 eab30390c70bbcfa6e435204040d5f2b 247 Pfam PF03932 CutC family 3 200 2.0E-78 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CKQ55_RS23625 eab30390c70bbcfa6e435204040d5f2b 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.556 T 29-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 CKQ55_RS23625 eab30390c70bbcfa6e435204040d5f2b 247 Gene3D G3DSA:3.20.20.380 1 247 4.2E-94 T 29-03-2018 CKQ55_RS23625 eab30390c70bbcfa6e435204040d5f2b 247 SUPERFAMILY SSF110395 3 243 9.68E-77 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 Pfam PF02814 UreE urease accessory protein, N-terminal domain 11 62 3.9E-12 T 29-03-2018 IPR004029 UreE urease accessory, N-terminal CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 Gene3D G3DSA:2.60.260.20 1 71 7.9E-20 T 29-03-2018 CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 SUPERFAMILY SSF69737 71 138 1.05E-21 T 29-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 SMART SM00988 1 65 2.9E-18 T 29-03-2018 IPR004029 UreE urease accessory, N-terminal CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 SUPERFAMILY SSF69287 1 71 9.81E-17 T 29-03-2018 IPR004029 UreE urease accessory, N-terminal CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 23.747 T 29-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 157 3.0E-30 T 29-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 Gene3D G3DSA:3.30.70.790 72 157 7.6E-32 T 29-03-2018 CKQ55_RS16675 81870604993c361684da204cd4fbd972 157 PIRSF PIRSF036402 3 152 6.2E-47 T 29-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CKQ55_RS29845 5024c36f17173a16a353dbf51c67ffcb 278 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 277 2.6E-95 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS29845 5024c36f17173a16a353dbf51c67ffcb 278 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 276 1.9E-88 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS29845 5024c36f17173a16a353dbf51c67ffcb 278 Gene3D G3DSA:3.20.20.70 2 278 3.5E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS29845 5024c36f17173a16a353dbf51c67ffcb 278 PIRSF PIRSF001359 1 277 8.7E-78 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS29845 5024c36f17173a16a353dbf51c67ffcb 278 SUPERFAMILY SSF51569 2 277 5.86E-84 T 29-03-2018 CKQ55_RS16340 cf6f457839b80661652434a2495f890d 99 Pfam PF13997 YqjK-like protein 15 87 1.1E-26 T 29-03-2018 IPR025612 YqjK-like protein CKQ55_RS28930 d129780efa1d5b6050d34f556bf402d0 179 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 157 3.5E-20 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CKQ55_RS28930 d129780efa1d5b6050d34f556bf402d0 179 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 167 3.2E-34 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CKQ55_RS15925 cd22e4f493f5aa2146028e5ac0f8dea7 181 Pfam PF03968 OstA-like protein 37 149 5.9E-33 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CKQ55_RS15925 cd22e4f493f5aa2146028e5ac0f8dea7 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 27 166 2.5E-52 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CKQ55_RS15925 cd22e4f493f5aa2146028e5ac0f8dea7 181 Gene3D G3DSA:2.60.450.10 27 164 2.2E-29 T 29-03-2018 CKQ55_RS15925 cd22e4f493f5aa2146028e5ac0f8dea7 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.102 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CKQ55_RS18055 ef91e8f15a9a779bdeed6ae12a83ed34 397 Gene3D G3DSA:1.20.1250.20 202 397 9.8E-4 T 29-03-2018 CKQ55_RS18055 ef91e8f15a9a779bdeed6ae12a83ed34 397 Pfam PF07690 Major Facilitator Superfamily 19 356 9.5E-15 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS18055 ef91e8f15a9a779bdeed6ae12a83ed34 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 38.853 T 29-03-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 CKQ55_RS18055 ef91e8f15a9a779bdeed6ae12a83ed34 397 SUPERFAMILY SSF103473 17 395 2.75E-24 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18055 ef91e8f15a9a779bdeed6ae12a83ed34 397 Gene3D G3DSA:1.20.1250.20 2 195 7.5E-16 T 29-03-2018 CKQ55_RS01090 a7680c76b55e77471ee7bac1927ad9a8 363 Gene3D G3DSA:3.20.20.30 1 362 1.9E-70 T 29-03-2018 CKQ55_RS01090 a7680c76b55e77471ee7bac1927ad9a8 363 SUPERFAMILY SSF51679 1 352 1.62E-81 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS01090 a7680c76b55e77471ee7bac1927ad9a8 363 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 355 9.7E-218 T 29-03-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 CKQ55_RS01090 a7680c76b55e77471ee7bac1927ad9a8 363 Pfam PF00296 Luciferase-like monooxygenase 1 320 4.3E-73 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS01090 a7680c76b55e77471ee7bac1927ad9a8 363 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 70.835 T 29-03-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 Pfam PF00107 Zinc-binding dehydrogenase 158 276 2.5E-17 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 2.3E-141 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 Gene3D G3DSA:3.90.180.10 1 151 5.1E-30 T 29-03-2018 CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 SUPERFAMILY SSF51735 115 287 8.95E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 SMART SM00829 12 321 1.5E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 SUPERFAMILY SSF50129 1 144 4.11E-45 T 29-03-2018 IPR011032 GroES-like CKQ55_RS15640 6220502a02118a8db7ec269388449a3e 324 Gene3D G3DSA:3.40.50.720 152 293 1.8E-18 T 29-03-2018 CKQ55_RS16685 1d74889e52c93f4ba42f585128dec640 106 Gene3D G3DSA:2.10.150.10 1 101 4.8E-46 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16685 1d74889e52c93f4ba42f585128dec640 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 30.81 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16685 1d74889e52c93f4ba42f585128dec640 106 Pfam PF00699 Urease beta subunit 3 99 2.7E-44 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16685 1d74889e52c93f4ba42f585128dec640 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 4.6E-45 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16685 1d74889e52c93f4ba42f585128dec640 106 SUPERFAMILY SSF51278 1 104 5.1E-47 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS29350 3d19c02c727bcfe0a1f31bd234c1c4b6 547 Gene3D G3DSA:3.90.76.10 45 209 1.6E-33 T 29-03-2018 CKQ55_RS29350 3d19c02c727bcfe0a1f31bd234c1c4b6 547 PIRSF PIRSF002741 1 543 1.8E-93 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS29350 3d19c02c727bcfe0a1f31bd234c1c4b6 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 2.3E-82 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS29350 3d19c02c727bcfe0a1f31bd234c1c4b6 547 Gene3D G3DSA:3.10.105.10 305 510 4.1E-53 T 29-03-2018 CKQ55_RS29350 3d19c02c727bcfe0a1f31bd234c1c4b6 547 Gene3D G3DSA:3.40.190.10 210 304 2.4E-23 T 29-03-2018 CKQ55_RS29350 3d19c02c727bcfe0a1f31bd234c1c4b6 547 SUPERFAMILY SSF53850 36 537 5.79E-133 T 29-03-2018 CKQ55_RS25130 abee99f521160cc8915e488b3af3f937 299 SUPERFAMILY SSF46689 17 86 1.76E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS25130 abee99f521160cc8915e488b3af3f937 299 Gene3D G3DSA:1.10.10.10 13 109 3.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25130 abee99f521160cc8915e488b3af3f937 299 Pfam PF01380 SIS domain 140 245 1.0E-9 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS25130 abee99f521160cc8915e488b3af3f937 299 Gene3D G3DSA:3.40.50.10490 110 293 1.5E-22 T 29-03-2018 CKQ55_RS25130 abee99f521160cc8915e488b3af3f937 299 SUPERFAMILY SSF53697 130 270 4.67E-21 T 29-03-2018 CKQ55_RS25130 abee99f521160cc8915e488b3af3f937 299 Pfam PF01418 Helix-turn-helix domain, rpiR family 22 83 5.5E-8 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 SMART SM00304 180 232 5.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 3.2E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 Pfam PF00672 HAMP domain 182 225 2.4E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 SUPERFAMILY SSF47384 227 289 9.42E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 Gene3D G3DSA:3.30.565.10 294 445 1.2E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 SUPERFAMILY SSF55874 292 440 1.44E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 3.5E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 Gene3D G3DSA:1.10.287.130 223 289 1.9E-12 T 29-03-2018 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 SMART SM00387 332 440 1.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS14390 5f89381d3c5b5ac2b7513130a30919c1 453 SMART SM00388 233 293 7.0E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS24440 e7e006222225337ee5a171eee1e9bfde 270 Pfam PF13369 Transglutaminase-like superfamily 34 185 2.6E-40 T 29-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CKQ55_RS24440 e7e006222225337ee5a171eee1e9bfde 270 Pfam PF13371 Tetratricopeptide repeat 188 260 1.6E-26 T 29-03-2018 CKQ55_RS24440 e7e006222225337ee5a171eee1e9bfde 270 Gene3D G3DSA:1.25.40.10 36 266 2.9E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.505 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 PIRSF PIRSF000450 1 308 1.9E-146 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 Gene3D G3DSA:3.40.50.880 34 301 2.1E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 SUPERFAMILY SSF52317 17 297 4.23E-99 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.3E-163 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.3E-131 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CKQ55_RS11395 0c187afab0a47ef34b5cd4d3bf855097 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-142 T 29-03-2018 CKQ55_RS29235 64eb5541b5cc28c39e3feecb9c47063c 473 SUPERFAMILY SSF103473 32 466 1.83E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29235 64eb5541b5cc28c39e3feecb9c47063c 473 Gene3D G3DSA:1.20.1250.20 262 471 2.4E-15 T 29-03-2018 CKQ55_RS29235 64eb5541b5cc28c39e3feecb9c47063c 473 Pfam PF00083 Sugar (and other) transporter 12 457 5.0E-34 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS29235 64eb5541b5cc28c39e3feecb9c47063c 473 Gene3D G3DSA:1.20.1250.20 30 239 1.2E-27 T 29-03-2018 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 PIRSF PIRSF000538 3 506 5.3E-95 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 Gene3D G3DSA:3.30.420.40 1 249 4.6E-61 T 29-03-2018 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 Gene3D G3DSA:3.30.420.40 250 511 7.1E-45 T 29-03-2018 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 SUPERFAMILY SSF53067 5 254 7.45E-57 T 29-03-2018 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 SUPERFAMILY SSF53067 261 495 9.58E-49 T 29-03-2018 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 2.0E-63 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS26805 4e2b687d20f21d728e8c6d6295dd991a 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 454 2.0E-27 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 8.5E-32 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 Pfam PF04542 Sigma-70 region 2 25 91 1.1E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 Gene3D G3DSA:1.10.10.10 116 187 1.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 Pfam PF08281 Sigma-70, region 4 129 180 2.9E-19 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 8.6E-98 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 Gene3D G3DSA:1.10.1740.10 1 115 6.0E-30 T 29-03-2018 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 SUPERFAMILY SSF88659 122 183 7.29E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS19920 3fdad04708f4884319e2f8acd2d4d6f0 191 SUPERFAMILY SSF88946 2 104 3.77E-31 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 SUPERFAMILY SSF46626 175 313 2.05E-38 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 1.9E-45 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 SUPERFAMILY SSF46626 20 174 5.34E-45 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 Pfam PF00034 Cytochrome c 194 307 9.1E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 PIRSF PIRSF000294 3 316 1.2E-94 T 29-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 Gene3D G3DSA:1.10.760.10 27 189 8.0E-41 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CKQ55_RS19510 f66b1b562708b4c835e089291275336c 318 Gene3D G3DSA:1.10.760.10 190 315 4.4E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 Pfam PF00005 ABC transporter 27 184 8.8E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 SMART SM00382 35 234 1.6E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 1.5E-24 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 1.8E-18 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 Gene3D G3DSA:3.40.50.300 3 335 1.1E-76 T 29-03-2018 CKQ55_RS04680 a3b74edd0cdbf0e2939b56f302fc8b73 336 SUPERFAMILY SSF52540 7 255 4.06E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 Gene3D G3DSA:3.40.50.720 161 448 2.9E-85 T 29-03-2018 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 SUPERFAMILY SSF53223 10 161 3.09E-54 T 29-03-2018 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 SUPERFAMILY SSF51735 163 453 1.07E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 SMART SM01274 18 151 9.6E-83 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 PIRSF PIRSF036684 1 758 0.0 T 29-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 Gene3D G3DSA:3.40.50.10380 5 160 1.7E-36 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.5E-100 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 SMART SM00919 163 401 9.6E-142 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.5E-20 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 Gene3D G3DSA:3.40.50.10750 573 727 1.3E-50 T 29-03-2018 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 SUPERFAMILY SSF53659 430 754 1.56E-92 T 29-03-2018 CKQ55_RS20455 72b644ae08e3c1c96808d66ef332a3dd 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 7.3E-29 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS29700 7d74da4026faa7d8dc7fc9ec44bccdaf 321 SUPERFAMILY SSF53187 2 318 9.26E-88 T 29-03-2018 CKQ55_RS29700 7d74da4026faa7d8dc7fc9ec44bccdaf 321 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 318 3.1E-64 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CKQ55_RS29700 7d74da4026faa7d8dc7fc9ec44bccdaf 321 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 317 3.4E-128 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CKQ55_RS29700 7d74da4026faa7d8dc7fc9ec44bccdaf 321 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 321 146.963 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CKQ55_RS29700 7d74da4026faa7d8dc7fc9ec44bccdaf 321 PIRSF PIRSF017020 1 321 3.7E-113 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CKQ55_RS29700 7d74da4026faa7d8dc7fc9ec44bccdaf 321 Gene3D G3DSA:3.40.630.10 35 297 7.6E-29 T 29-03-2018 CKQ55_RS24070 287a0d28e698a897862d270cba67d631 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 8.8E-112 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CKQ55_RS24070 287a0d28e698a897862d270cba67d631 270 SUPERFAMILY SSF52540 1 268 1.12E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24070 287a0d28e698a897862d270cba67d631 270 Gene3D G3DSA:3.40.50.300 1 260 2.2E-55 T 29-03-2018 CKQ55_RS24070 287a0d28e698a897862d270cba67d631 270 Pfam PF13614 AAA domain 3 157 2.4E-21 T 29-03-2018 IPR025669 AAA domain CKQ55_RS24070 287a0d28e698a897862d270cba67d631 270 PIRSF PIRSF003092 1 270 1.8E-100 T 29-03-2018 IPR025501 ATP binding protein MinD CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Gene3D G3DSA:3.30.300.20 278 347 1.9E-12 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Gene3D G3DSA:2.40.50.140 129 198 2.6E-13 T 29-03-2018 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SUPERFAMILY SSF54814 201 278 1.11E-28 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Pfam PF08529 NusA N-terminal domain 4 123 2.0E-37 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Gene3D G3DSA:3.30.300.20 199 276 1.5E-32 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 4.6E-9 T 29-03-2018 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SMART SM00316 133 200 3.7E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SUPERFAMILY SSF47794 355 415 2.98E-17 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.3E-129 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.7E-20 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.2E-18 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Gene3D G3DSA:3.30.1480.10 1 128 9.7E-46 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SUPERFAMILY SSF69705 1 126 1.96E-41 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Pfam PF13184 NusA-like KH domain 230 297 1.6E-27 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Gene3D G3DSA:1.10.150.20 352 421 1.5E-15 T 29-03-2018 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Gene3D G3DSA:1.10.150.20 427 495 5.3E-17 T 29-03-2018 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SUPERFAMILY SSF47794 429 492 1.07E-17 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Pfam PF00575 S1 RNA binding domain 134 195 9.3E-5 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.147 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CKQ55_RS16080 f27b96a79c9d0d57eff61a43f768ab5b 495 SUPERFAMILY SSF50249 132 199 2.81E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 62.452 T 29-03-2018 IPR023938 HMP-PP phosphatase GO:0016818 CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 29-03-2018 CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.9E-45 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 Gene3D G3DSA:3.40.50.1000 172 266 2.0E-12 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 SUPERFAMILY SSF56784 1 262 2.76E-63 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 2.8E-54 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 Gene3D G3DSA:3.30.1240.10 82 171 9.7E-19 T 29-03-2018 CKQ55_RS06150 0d8a213f3cface7b550e1e08b09402f1 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.2E-59 T 29-03-2018 IPR000150 Cof family GO:0016787 CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 Pfam PF00266 Aminotransferase class-V 4 350 3.2E-68 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 3.4E-153 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 PIRSF PIRSF000525 1 362 5.6E-147 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 Gene3D G3DSA:3.40.640.10 16 259 2.3E-21 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.658 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 SUPERFAMILY SSF53383 3 362 6.63E-110 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS02120 39a4669712b9f8d51ffc4d7378ee1bf0 362 Gene3D G3DSA:3.90.1150.10 260 360 1.9E-36 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS25195 96680af03e6529553845a62bc3c7479e 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.7E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS25195 96680af03e6529553845a62bc3c7479e 163 SUPERFAMILY SSF141452 2 160 3.4E-44 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS25195 96680af03e6529553845a62bc3c7479e 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS25195 96680af03e6529553845a62bc3c7479e 163 Gene3D G3DSA:2.30.110.20 1 163 7.2E-52 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 Pfam PF03958 Bacterial type II/III secretion system short domain 182 252 3.5E-14 T 29-03-2018 IPR005644 NolW-like CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 Pfam PF03958 Bacterial type II/III secretion system short domain 257 334 1.2E-17 T 29-03-2018 IPR005644 NolW-like CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 Pfam PF03958 Bacterial type II/III secretion system short domain 117 178 3.4E-10 T 29-03-2018 IPR005644 NolW-like CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 570 584 1.8E-44 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 334 344 1.8E-44 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 414 438 1.8E-44 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 459 1.8E-44 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 547 565 1.8E-44 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 21 590 4.4E-166 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 Pfam PF00263 Bacterial type II and III secretion system protein 418 583 2.7E-50 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CKQ55_RS07750 5db7b60b77370b9dca73f48820b57244 648 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 528 561 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CKQ55_RS18895 576a3ba19e5ff7330cc24e216caa5939 412 Pfam PF01966 HD domain 40 152 9.6E-11 T 29-03-2018 IPR006674 HD domain CKQ55_RS18895 576a3ba19e5ff7330cc24e216caa5939 412 SUPERFAMILY SSF109604 236 340 3.34E-5 T 29-03-2018 CKQ55_RS18895 576a3ba19e5ff7330cc24e216caa5939 412 SUPERFAMILY SSF109604 31 189 3.77E-12 T 29-03-2018 CKQ55_RS18895 576a3ba19e5ff7330cc24e216caa5939 412 Gene3D G3DSA:1.10.3210.10 226 410 1.1E-6 T 29-03-2018 CKQ55_RS18895 576a3ba19e5ff7330cc24e216caa5939 412 Gene3D G3DSA:1.10.3210.10 10 204 2.5E-17 T 29-03-2018 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 1.4E-10 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 131 28.124 T 29-03-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 Gene3D G3DSA:3.30.70.1150 37 127 6.4E-32 T 29-03-2018 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 SUPERFAMILY SSF55021 53 132 1.42E-26 T 29-03-2018 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 SUPERFAMILY SSF47598 1 46 4.5E-12 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 Gene3D G3DSA:1.10.1220.10 2 36 1.7E-13 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 130 7.5E-67 T 29-03-2018 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 CKQ55_RS14525 50cc6407c1ed002d096efcdb910a561a 138 Pfam PF08753 NikR C terminal nickel binding domain 54 127 5.4E-28 T 29-03-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 SUPERFAMILY SSF53850 22 323 1.76E-63 T 29-03-2018 CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 Gene3D G3DSA:3.40.190.10 135 275 3.1E-32 T 29-03-2018 CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 290 4.5E-18 T 29-03-2018 CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 Gene3D G3DSA:3.40.190.10 18 134 1.3E-4 T 29-03-2018 CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 7 327 3.6E-178 T 29-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CKQ55_RS08280 308dc26f60518be61ac3783054339aa4 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 4.9E-150 T 29-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 CKQ55_RS29355 74bfe112740237d16aa3a4484fab4177 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.4E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29355 74bfe112740237d16aa3a4484fab4177 321 SUPERFAMILY SSF161098 70 138 3.4E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29355 74bfe112740237d16aa3a4484fab4177 321 SUPERFAMILY SSF161098 178 300 3.4E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29355 74bfe112740237d16aa3a4484fab4177 321 Gene3D G3DSA:1.10.3720.10 4 303 2.2E-41 T 29-03-2018 CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 Pfam PF00654 Voltage gated chloride channel 67 360 2.2E-18 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 Gene3D G3DSA:1.10.3080.10 4 399 9.1E-29 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 SUPERFAMILY SSF81340 9 398 3.14E-37 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 9 410 37.152 T 29-03-2018 IPR022969 Chloride channel YfeO CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 PRINTS PR00762 Chloride channel signature 153 172 3.0E-5 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 PRINTS PR00762 Chloride channel signature 320 340 3.0E-5 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS20770 6bde9f23e059bcda422facf2f70dbedb 411 PRINTS PR00762 Chloride channel signature 103 122 3.0E-5 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 Gene3D G3DSA:3.40.50.300 270 326 4.5E-8 T 29-03-2018 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 Gene3D G3DSA:3.40.50.300 114 269 7.1E-26 T 29-03-2018 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 Gene3D G3DSA:3.30.450.90 1 97 5.4E-13 T 29-03-2018 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 SUPERFAMILY SSF52540 4 324 2.56E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 Pfam PF00437 Type II/IV secretion system protein 75 258 5.6E-41 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 325 2.6E-130 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CKQ55_RS17140 05883d4319a2b0a01a517e068618b09c 326 SMART SM00382 119 247 0.0096 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27105 dc810e8bbbd3ea16bc8a5a875d166727 267 Pfam PF00975 Thioesterase domain 20 247 3.0E-60 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CKQ55_RS27105 dc810e8bbbd3ea16bc8a5a875d166727 267 SUPERFAMILY SSF53474 9 244 2.1E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27105 dc810e8bbbd3ea16bc8a5a875d166727 267 Gene3D G3DSA:3.40.50.1820 2 249 5.7E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27105 dc810e8bbbd3ea16bc8a5a875d166727 267 SMART SM00824 Thioesterase 23 249 6.6E-5 T 29-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 SUPERFAMILY SSF53633 12 299 2.23E-57 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 Gene3D G3DSA:3.40.1160.10 9 319 2.3E-50 T 29-03-2018 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 SUPERFAMILY SSF51735 457 630 4.33E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 1.4E-64 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 4.4E-24 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 Gene3D G3DSA:3.30.360.10 630 787 4.9E-50 T 29-03-2018 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 Pfam PF00742 Homoserine dehydrogenase 608 803 2.7E-43 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 PIRSF PIRSF000727 12 810 2.1E-295 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 Pfam PF00696 Amino acid kinase family 12 284 4.6E-43 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 SUPERFAMILY SSF55347 608 791 1.57E-46 T 29-03-2018 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 Gene3D G3DSA:3.40.50.720 455 629 1.1E-23 T 29-03-2018 CKQ55_RS12260 843f167113b6f6ea1c2641ea81ff1ecd 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 Gene3D G3DSA:3.40.190.10 197 285 3.0E-18 T 29-03-2018 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 2.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 SUPERFAMILY SSF46785 17 126 2.01E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 4.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 Gene3D G3DSA:3.40.190.10 107 196 3.4E-19 T 29-03-2018 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 SUPERFAMILY SSF53850 110 309 7.24E-30 T 29-03-2018 CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 Gene3D G3DSA:1.10.10.10 5 104 1.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22000 f0320761421d6977ce6711e61f5c6069 311 Pfam PF03466 LysR substrate binding domain 107 310 1.7E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS03615 6d23e1e9c044a012fdea3125dd2186e3 379 PIRSF PIRSF000267 2 378 6.6E-133 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS03615 6d23e1e9c044a012fdea3125dd2186e3 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.5E-201 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS03615 6d23e1e9c044a012fdea3125dd2186e3 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.1E-111 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 Pfam PF13407 Periplasmic binding protein domain 72 317 1.4E-14 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 SUPERFAMILY SSF47413 9 65 1.8E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 SMART SM00354 7 80 2.0E-12 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 Gene3D G3DSA:3.40.50.2300 64 172 6.4E-25 T 29-03-2018 CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 Gene3D G3DSA:3.40.50.2300 173 337 2.9E-20 T 29-03-2018 CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 Gene3D G3DSA:1.10.260.40 6 63 1.8E-13 T 29-03-2018 CKQ55_RS09510 da8529d3c58d4534682c14c5c88a8064 342 SUPERFAMILY SSF53822 67 329 3.21E-42 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS12875 19e003ce91fae9d57f24f293604ea7b8 330 PIRSF PIRSF001555 1 329 1.5E-151 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CKQ55_RS12875 19e003ce91fae9d57f24f293604ea7b8 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.79 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CKQ55_RS12875 19e003ce91fae9d57f24f293604ea7b8 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 2.3E-192 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CKQ55_RS12875 19e003ce91fae9d57f24f293604ea7b8 330 Gene3D G3DSA:3.30.930.10 1 329 7.9E-40 T 29-03-2018 CKQ55_RS12875 19e003ce91fae9d57f24f293604ea7b8 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 3.7E-94 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CKQ55_RS12875 19e003ce91fae9d57f24f293604ea7b8 330 SUPERFAMILY SSF55681 7 325 5.33E-98 T 29-03-2018 CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 SMART SM00345 13 71 2.9E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 Pfam PF07729 FCD domain 117 189 1.9E-6 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 7.0E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 7.0E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 SUPERFAMILY SSF48008 107 201 2.2E-7 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 Gene3D G3DSA:1.10.10.10 1 72 1.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 Gene3D G3DSA:1.20.120.530 73 210 2.6E-11 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 SUPERFAMILY SSF46785 5 75 1.14E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15735 0988e756d625fe5e6c361167541eadd6 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 67 2.5E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 SUPERFAMILY SSF52540 6 269 4.49E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 Pfam PF00154 recA bacterial DNA recombination protein 9 270 4.1E-142 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 PRINTS PR00142 RecA protein signature 129 158 2.2E-83 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 PRINTS PR00142 RecA protein signature 95 124 2.2E-83 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 PRINTS PR00142 RecA protein signature 167 196 2.2E-83 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 PRINTS PR00142 RecA protein signature 245 274 2.2E-83 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 PRINTS PR00142 RecA protein signature 299 316 2.2E-83 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 PRINTS PR00142 RecA protein signature 212 240 2.2E-83 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.4E-172 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 ProSitePatterns PS00321 recA signature. 215 223 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 Gene3D G3DSA:3.40.50.300 28 270 9.7E-47 T 29-03-2018 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 SMART SM00382 59 230 4.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 SUPERFAMILY SSF54752 272 327 7.98E-21 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 Hamap MF_00268 Protein RecA [recA]. 7 331 50.94 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CKQ55_RS19250 415b155eb658981c27dfde790e6bcbb9 352 Gene3D G3DSA:3.30.250.10 272 328 5.5E-25 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 SUPERFAMILY SSF52821 165 278 1.2E-35 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 SUPERFAMILY SSF52821 1 145 9.56E-43 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 Pfam PF00581 Rhodanese-like domain 166 270 6.7E-12 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 Pfam PF00581 Rhodanese-like domain 9 128 2.3E-18 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 SMART SM00450 155 275 1.4E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 SMART SM00450 7 132 6.5E-29 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 Gene3D G3DSA:3.40.250.10 1 154 5.2E-35 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 Gene3D G3DSA:3.40.250.10 157 281 1.4E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS20165 67bd48f6b9e286d6f0a7effd724ef65d 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 Gene3D G3DSA:1.20.120.530 97 241 9.6E-24 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 SUPERFAMILY SSF48008 97 233 4.97E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 9.8E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 SMART SM00345 16 75 5.5E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 Gene3D G3DSA:1.10.10.10 7 76 3.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 SMART SM00895 98 225 1.4E-17 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 SUPERFAMILY SSF46785 10 79 8.53E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18025 52345003ef23e2640bf4f155a9e7099a 257 Pfam PF07729 FCD domain 98 224 1.6E-19 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS06640 2155aaa0026593714e0080b2232df586 386 SUPERFAMILY SSF56601 32 357 1.48E-66 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS06640 2155aaa0026593714e0080b2232df586 386 Gene3D G3DSA:3.40.710.10 26 375 6.6E-69 T 29-03-2018 CKQ55_RS06640 2155aaa0026593714e0080b2232df586 386 Pfam PF00144 Beta-lactamase 46 356 1.5E-61 T 29-03-2018 IPR001466 Beta-lactamase-related CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 Pfam PF04055 Radical SAM superfamily 146 323 1.5E-30 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 SUPERFAMILY SSF102114 105 371 2.62E-54 T 29-03-2018 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.1E-21 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 Gene3D G3DSA:3.80.30.20 137 379 1.3E-48 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 6.4E-111 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 SMART SM00729 140 365 1.9E-54 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 8.6E-199 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.013 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CKQ55_RS02980 2baf2d8f5d2fff2bc5932d31563c2bea 441 Gene3D G3DSA:2.40.50.140 380 441 1.1E-22 T 29-03-2018 CKQ55_RS30035 d66afb2b1f9556c4a07778c8a542376f 332 Pfam PF01032 FecCD transport family 21 330 1.4E-88 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS30035 d66afb2b1f9556c4a07778c8a542376f 332 Gene3D G3DSA:1.10.3470.10 3 332 2.8E-60 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS30035 d66afb2b1f9556c4a07778c8a542376f 332 SUPERFAMILY SSF81345 4 331 6.28E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS18980 21e9be8f0672843ede16e1ad0a2e28e9 116 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 1.9E-40 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA CKQ55_RS18980 21e9be8f0672843ede16e1ad0a2e28e9 116 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 2.0E-42 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:1.10.1200.10 20 98 2.1E-11 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Pfam PF00668 Condensation domain 1530 1905 3.0E-24 T 29-03-2018 IPR001242 Condensation domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Pfam PF00668 Condensation domain 149 533 7.2E-23 T 29-03-2018 IPR001242 Condensation domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF52777 1490 1680 2.11E-20 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF52777 1669 1911 6.89E-42 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Pfam PF00501 AMP-binding enzyme 575 965 1.6E-93 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SMART SM00823 Phosphopantetheine attachment site 1408 1478 0.15 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SMART SM00823 Phosphopantetheine attachment site 1946 2014 0.0052 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF47336 21 125 9.42E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF47336 1946 2011 1.57E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF56801 1344 1422 2.62E-135 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF56801 548 1018 2.62E-135 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:3.30.559.10 99 300 1.2E-19 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:3.30.559.10 1479 1673 3.4E-20 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:1.10.1200.10 1418 1478 5.9E-16 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:2.30.38.10 879 956 1.4E-22 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:3.40.50.980 715 875 1.6E-37 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF52777 117 289 4.67E-19 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Pfam PF00550 Phosphopantetheine attachment site 22 83 3.4E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Pfam PF00550 Phosphopantetheine attachment site 1949 2010 2.6E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Pfam PF00550 Phosphopantetheine attachment site 1413 1473 1.2E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:3.40.50.980 564 714 1.1E-39 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 5.7E-120 T 29-03-2018 IPR010071 Amino acid adenylation domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF47336 1405 1475 1.7E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF53335 1165 1290 1.12E-11 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:1.10.1200.10 1930 2023 8.7E-10 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 Gene3D G3DSA:3.30.300.30 961 1417 7.4E-29 T 29-03-2018 CKQ55_RS27120 98db06f2c178a42115b5adcc5042ae29 2032 SUPERFAMILY SSF52777 296 536 4.45E-38 T 29-03-2018 CKQ55_RS15520 886fe385f53cb959a471a7564c42d9e7 184 SUPERFAMILY SSF51161 5 175 6.1E-44 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS15520 886fe385f53cb959a471a7564c42d9e7 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.9E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS15520 886fe385f53cb959a471a7564c42d9e7 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 47 8.3E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS15520 886fe385f53cb959a471a7564c42d9e7 184 Gene3D G3DSA:2.160.10.10 2 184 3.8E-41 T 29-03-2018 CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 SUPERFAMILY SSF51735 7 264 1.52E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.7E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.7E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.7E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 2.9E-64 T 29-03-2018 CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 Gene3D G3DSA:3.40.50.720 40 265 3.3E-65 T 29-03-2018 CKQ55_RS04545 4d26caf8a89449e9acd6ab04207649e9 265 Gene3D G3DSA:3.40.50.720 1 39 2.9E-8 T 29-03-2018 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 Gene3D G3DSA:1.10.10.60 227 280 9.2E-19 T 29-03-2018 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 SUPERFAMILY SSF46689 174 221 7.97E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 6.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 6.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 SUPERFAMILY SSF46689 224 276 1.43E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 SMART SM00342 188 271 7.4E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 Gene3D G3DSA:2.60.120.10 42 226 1.1E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12225 26eaba57eb32d4e5313357d5353870a3 287 Pfam PF12833 Helix-turn-helix domain 194 273 5.6E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 SUPERFAMILY SSF75217 75 242 3.3E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 Gene3D G3DSA:2.40.240.20 1 73 7.2E-21 T 29-03-2018 CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 PIRSF PIRSF015601 3 242 1.6E-51 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 Gene3D G3DSA:3.40.1280.10 74 243 3.7E-55 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 3.2E-88 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 SUPERFAMILY SSF88697 2 68 1.07E-16 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS17165 a64c828b3d97927d948fec14a324f5ce 243 Pfam PF04452 RNA methyltransferase 19 236 2.1E-71 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS13965 9e690a944a04e9875602b6fce4b74233 154 SUPERFAMILY SSF51197 1 153 5.49E-45 T 29-03-2018 CKQ55_RS13965 9e690a944a04e9875602b6fce4b74233 154 Gene3D G3DSA:2.60.120.370 1 154 1.4E-48 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS13965 9e690a944a04e9875602b6fce4b74233 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 3.4E-61 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS13965 9e690a944a04e9875602b6fce4b74233 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.2E-44 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS01360 189ce46bafa07e6180d416fa03c1d226 166 SUPERFAMILY SSF158694 4 162 1.02E-43 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CKQ55_RS01360 189ce46bafa07e6180d416fa03c1d226 166 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 7 164 1.8E-57 T 29-03-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 CKQ55_RS01360 189ce46bafa07e6180d416fa03c1d226 166 Pfam PF09349 OHCU decarboxylase 8 161 9.8E-41 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CKQ55_RS01360 189ce46bafa07e6180d416fa03c1d226 166 Gene3D G3DSA:1.10.3330.10 1 166 5.2E-49 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CKQ55_RS00120 a71013d10a4f12bd24176154c9502239 380 Gene3D G3DSA:1.10.443.10 195 372 6.8E-21 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS00120 a71013d10a4f12bd24176154c9502239 380 Pfam PF00589 Phage integrase family 195 366 1.5E-19 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS00120 a71013d10a4f12bd24176154c9502239 380 Gene3D G3DSA:3.30.160.60 1 62 1.9E-19 T 29-03-2018 CKQ55_RS00120 a71013d10a4f12bd24176154c9502239 380 SUPERFAMILY SSF56349 84 368 5.3E-49 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS00120 a71013d10a4f12bd24176154c9502239 380 Gene3D G3DSA:1.10.150.130 79 194 1.8E-12 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS00120 a71013d10a4f12bd24176154c9502239 380 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 1 72 1.2E-32 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CKQ55_RS00490 a71013d10a4f12bd24176154c9502239 380 Gene3D G3DSA:1.10.443.10 195 372 6.8E-21 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS00490 a71013d10a4f12bd24176154c9502239 380 Pfam PF00589 Phage integrase family 195 366 1.5E-19 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS00490 a71013d10a4f12bd24176154c9502239 380 Gene3D G3DSA:3.30.160.60 1 62 1.9E-19 T 29-03-2018 CKQ55_RS00490 a71013d10a4f12bd24176154c9502239 380 SUPERFAMILY SSF56349 84 368 5.3E-49 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS00490 a71013d10a4f12bd24176154c9502239 380 Gene3D G3DSA:1.10.150.130 79 194 1.8E-12 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS00490 a71013d10a4f12bd24176154c9502239 380 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 1 72 1.2E-32 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CKQ55_RS09015 0eb35b476188bd00e245cf6293cd30b2 177 SUPERFAMILY SSF55729 11 149 3.49E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS09015 0eb35b476188bd00e245cf6293cd30b2 177 Pfam PF00583 Acetyltransferase (GNAT) family 44 141 4.7E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS09015 0eb35b476188bd00e245cf6293cd30b2 177 Gene3D G3DSA:3.40.630.30 72 159 2.2E-19 T 29-03-2018 CKQ55_RS09015 0eb35b476188bd00e245cf6293cd30b2 177 Gene3D G3DSA:3.40.630.30 6 71 0.021 T 29-03-2018 CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 Gene3D G3DSA:1.10.10.10 2 73 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 Gene3D G3DSA:3.40.1410.10 89 227 8.5E-32 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 SMART SM00345 6 65 1.6E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.5E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 SMART SM00866 86 225 4.6E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 Pfam PF07702 UTRA domain 90 224 3.9E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 SUPERFAMILY SSF46785 2 69 3.01E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23015 a714f2962c628936cf13c16b881fc9c6 232 SUPERFAMILY SSF64288 54 227 2.36E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 Gene3D G3DSA:1.10.10.60 3 19 0.078 T 29-03-2018 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 SUPERFAMILY SSF47413 6 63 2.94E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 55 3.4E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 Pfam PF13377 Periplasmic binding protein-like domain 179 332 6.2E-13 T 29-03-2018 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 Gene3D G3DSA:3.40.50.2300 173 333 1.3E-24 T 29-03-2018 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 SUPERFAMILY SSF53822 65 329 5.3E-48 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 SMART SM00354 5 78 1.0E-38 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 4.5E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 4.5E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 Gene3D G3DSA:1.10.260.40 20 61 5.5E-23 T 29-03-2018 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 Gene3D G3DSA:3.40.50.2300 62 172 2.3E-22 T 29-03-2018 CKQ55_RS05070 3748a4b9bbfc9acb429adaaa3fdcedf4 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 7 333 6.3E-146 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CKQ55_RS08675 17c3b70406f19ee781e341bd74e0ebd3 22 Hamap MF_01907 thr operon leader peptide [thrL]. 1 22 11.501 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CKQ55_RS08675 17c3b70406f19ee781e341bd74e0ebd3 22 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 22 5.8E-7 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CKQ55_RS08675 17c3b70406f19ee781e341bd74e0ebd3 22 Pfam PF08254 Threonine leader peptide 1 22 3.9E-12 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 SUPERFAMILY SSF53067 7 255 2.35E-61 T 29-03-2018 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 Gene3D G3DSA:3.30.420.40 3 249 8.6E-60 T 29-03-2018 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 PIRSF PIRSF000538 5 498 5.0E-99 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 253 3.6E-84 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 443 1.2E-19 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 SUPERFAMILY SSF53067 256 492 1.12E-54 T 29-03-2018 CKQ55_RS13950 4b63f1b9d54ad6031d52e25814dbeb94 501 Gene3D G3DSA:3.30.420.40 250 492 6.8E-48 T 29-03-2018 CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 Gene3D G3DSA:3.40.50.980 165 322 6.8E-38 T 29-03-2018 CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 Gene3D G3DSA:2.30.38.10 323 404 3.1E-19 T 29-03-2018 CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 SUPERFAMILY SSF56801 7 508 1.2E-125 T 29-03-2018 CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 495 2.7E-15 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 Pfam PF00501 AMP-binding enzyme 16 411 4.7E-79 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 Gene3D G3DSA:3.40.50.980 7 164 1.9E-34 T 29-03-2018 CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS17700 1750ab4d652928cdf35e403e97817654 518 Gene3D G3DSA:3.30.300.30 405 511 4.7E-24 T 29-03-2018 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 Gene3D G3DSA:3.40.30.10 1 109 2.1E-36 T 29-03-2018 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 SUPERFAMILY SSF52833 2 108 2.55E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 PIRSF PIRSF000077 2 108 1.4E-44 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 PRINTS PR00421 Thioredoxin family signature 24 32 8.5E-10 T 29-03-2018 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 PRINTS PR00421 Thioredoxin family signature 72 83 8.5E-10 T 29-03-2018 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 PRINTS PR00421 Thioredoxin family signature 32 41 8.5E-10 T 29-03-2018 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 5.8E-39 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CKQ55_RS12000 0ac673c32c8aa01304b765ab7bb70899 109 Pfam PF00085 Thioredoxin 5 106 1.8E-34 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Gene3D G3DSA:3.30.950.10 340 469 5.1E-39 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Gene3D G3DSA:3.30.160.110 121 148 1.1E-15 T 29-03-2018 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Gene3D G3DSA:1.10.8.210 151 208 3.7E-21 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 PIRSF PIRSF036426 1 465 1.2E-195 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.7E-8 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 3.3E-78 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Gene3D G3DSA:3.40.1010.10 215 339 2.2E-38 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 49.845 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.9E-21 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Pfam PF13241 Putative NAD(P)-binding 6 115 1.0E-28 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 SUPERFAMILY SSF51735 2 113 1.84E-22 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 SUPERFAMILY SSF75615 114 207 5.36E-28 T 29-03-2018 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 5.9E-52 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 Gene3D G3DSA:3.40.50.720 3 120 2.5E-20 T 29-03-2018 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 SUPERFAMILY SSF53790 211 458 3.66E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18690 08e4f9ba2d4c6dabf78dfbdcf4b13b8e 471 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 5.2E-88 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS19200 8edf7626219e3efaaec19261e0e66cbd 120 SUPERFAMILY SSF141530 4 118 7.98E-37 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS19200 8edf7626219e3efaaec19261e0e66cbd 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 113 7.7E-39 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS19200 8edf7626219e3efaaec19261e0e66cbd 120 Gene3D G3DSA:2.40.33.40 3 118 3.2E-39 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS19200 8edf7626219e3efaaec19261e0e66cbd 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 2.0E-46 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS21215 0e64ccc2a23a0726f325abf4b3671487 306 Gene3D G3DSA:3.60.15.10 1 306 6.5E-59 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS21215 0e64ccc2a23a0726f325abf4b3671487 306 Pfam PF12706 Beta-lactamase superfamily domain 36 153 2.2E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS21215 0e64ccc2a23a0726f325abf4b3671487 306 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 39.448 T 29-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CKQ55_RS21215 0e64ccc2a23a0726f325abf4b3671487 306 SUPERFAMILY SSF56281 1 304 1.79E-83 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS21215 0e64ccc2a23a0726f325abf4b3671487 306 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 9.7E-103 T 29-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 SUPERFAMILY SSF48008 98 230 5.23E-27 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 SMART SM00345 12 71 1.4E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 Pfam PF07729 FCD domain 100 222 1.6E-24 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 SMART SM00895 100 224 6.0E-21 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 SUPERFAMILY SSF46785 7 75 7.71E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 4.4E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 Gene3D G3DSA:1.20.120.530 83 244 6.0E-31 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 Gene3D G3DSA:1.10.10.10 4 73 1.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.3E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13860 dafe4b83a0a1c1122510e53a42dcd018 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.3E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13240 13610c2b3e7659e77aa14e53679b8bb1 500 Gene3D G3DSA:3.30.565.10 367 500 2.0E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13240 13610c2b3e7659e77aa14e53679b8bb1 500 SMART SM00387 409 499 1.1E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13240 13610c2b3e7659e77aa14e53679b8bb1 500 Pfam PF05231 MASE1 15 275 1.3E-12 T 29-03-2018 IPR007895 MASE1 CKQ55_RS13240 13610c2b3e7659e77aa14e53679b8bb1 500 Pfam PF07730 Histidine kinase 305 370 1.2E-14 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CKQ55_RS13240 13610c2b3e7659e77aa14e53679b8bb1 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 498 5.9E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13240 13610c2b3e7659e77aa14e53679b8bb1 500 SUPERFAMILY SSF55874 386 497 6.71E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08080 4464dd3b6a8e4453eb745a1f7494e87e 247 Pfam PF07072 Cell division protein 19 225 2.1E-79 T 29-03-2018 IPR009777 Cell division protein ZapD CKQ55_RS08080 4464dd3b6a8e4453eb745a1f7494e87e 247 SUPERFAMILY SSF160950 4 247 2.09E-92 T 29-03-2018 IPR009777 Cell division protein ZapD CKQ55_RS08080 4464dd3b6a8e4453eb745a1f7494e87e 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.934 T 29-03-2018 IPR009777 Cell division protein ZapD CKQ55_RS08080 4464dd3b6a8e4453eb745a1f7494e87e 247 Gene3D G3DSA:2.60.440.10 175 247 1.1E-27 T 29-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain CKQ55_RS08080 4464dd3b6a8e4453eb745a1f7494e87e 247 Gene3D G3DSA:1.10.3900.10 13 174 4.6E-64 T 29-03-2018 CKQ55_RS17100 ddadfd405f14b919eb453bfea2b2a7f8 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 2.1E-140 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CKQ55_RS17100 ddadfd405f14b919eb453bfea2b2a7f8 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.2E-111 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CKQ55_RS17100 ddadfd405f14b919eb453bfea2b2a7f8 433 PIRSF PIRSF006066 4 433 1.9E-163 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 Pfam PF07729 FCD domain 108 225 2.1E-20 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 SUPERFAMILY SSF46785 11 81 1.47E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 Gene3D G3DSA:1.20.120.530 100 228 2.9E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 SMART SM00895 106 227 3.8E-16 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 Gene3D G3DSA:1.10.10.10 1 79 3.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 SMART SM00345 18 77 1.8E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 6.8E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 6.8E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 9.1E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12820 2bcbb3485ff3018da0f588b277f1eeff 233 SUPERFAMILY SSF48008 107 225 6.8E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS17495 d59fec25b50014be1a440127a34446ae 497 SUPERFAMILY SSF50475 13 327 1.02E-62 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS17495 d59fec25b50014be1a440127a34446ae 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 27 439 2.8E-105 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CKQ55_RS17495 d59fec25b50014be1a440127a34446ae 497 SUPERFAMILY SSF143968 332 487 7.72E-34 T 29-03-2018 CKQ55_RS17495 d59fec25b50014be1a440127a34446ae 497 Gene3D G3DSA:3.40.1670.10 329 483 3.1E-34 T 29-03-2018 CKQ55_RS14430 a2748c7faab570abeab1ffea99d79cc1 260 Gene3D G3DSA:3.40.50.1820 2 255 1.1E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS14430 a2748c7faab570abeab1ffea99d79cc1 260 Pfam PF00561 alpha/beta hydrolase fold 15 242 3.4E-26 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS14430 a2748c7faab570abeab1ffea99d79cc1 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.617 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CKQ55_RS14430 a2748c7faab570abeab1ffea99d79cc1 260 SUPERFAMILY SSF53474 3 251 9.13E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS14430 a2748c7faab570abeab1ffea99d79cc1 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 3.8E-111 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CKQ55_RS16500 72cc6f0e62cb09c7c1bdd84add96ef1d 783 SUPERFAMILY SSF48208 558 780 2.08E-84 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS16500 72cc6f0e62cb09c7c1bdd84add96ef1d 783 SUPERFAMILY SSF48208 306 530 2.08E-84 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS16500 72cc6f0e62cb09c7c1bdd84add96ef1d 783 Gene3D G3DSA:1.50.10.10 295 783 3.0E-99 T 29-03-2018 CKQ55_RS16500 72cc6f0e62cb09c7c1bdd84add96ef1d 783 Gene3D G3DSA:1.10.287.100 257 293 7.6E-15 T 29-03-2018 CKQ55_RS16500 72cc6f0e62cb09c7c1bdd84add96ef1d 783 Pfam PF01204 Trehalase 414 761 3.6E-10 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS16500 72cc6f0e62cb09c7c1bdd84add96ef1d 783 Gene3D G3DSA:2.70.98.50 26 254 1.0E-84 T 29-03-2018 CKQ55_RS23700 211669487e92bcb33f191b205e139dee 314 SUPERFAMILY SSF53807 27 312 2.35E-78 T 29-03-2018 CKQ55_RS23700 211669487e92bcb33f191b205e139dee 314 Gene3D G3DSA:3.40.50.1980 194 312 1.3E-25 T 29-03-2018 CKQ55_RS23700 211669487e92bcb33f191b205e139dee 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 308 2.1E-58 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CKQ55_RS23700 211669487e92bcb33f191b205e139dee 314 Gene3D G3DSA:3.40.50.1980 27 193 2.1E-45 T 29-03-2018 CKQ55_RS20425 d44e10c144437c861db2fb9f2553b15b 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 3.2E-32 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CKQ55_RS20425 d44e10c144437c861db2fb9f2553b15b 117 SUPERFAMILY SSF52833 1 114 2.61E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS20425 d44e10c144437c861db2fb9f2553b15b 117 Gene3D G3DSA:3.40.30.10 1 114 3.7E-35 T 29-03-2018 CKQ55_RS20425 d44e10c144437c861db2fb9f2553b15b 117 Pfam PF03960 ArsC family 5 114 5.1E-16 T 29-03-2018 IPR006660 Arsenate reductase-like CKQ55_RS03500 479bcd0bb93eea81248e9af45b385672 347 Gene3D G3DSA:2.70.98.10 5 347 6.6E-105 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS03500 479bcd0bb93eea81248e9af45b385672 347 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 344 4.9E-139 T 29-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CKQ55_RS03500 479bcd0bb93eea81248e9af45b385672 347 PIRSF PIRSF005096 1 347 2.3E-122 T 29-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CKQ55_RS03500 479bcd0bb93eea81248e9af45b385672 347 SUPERFAMILY SSF74650 6 344 1.32E-105 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS03500 479bcd0bb93eea81248e9af45b385672 347 Pfam PF01263 Aldose 1-epimerase 17 342 5.0E-88 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CKQ55_RS03500 479bcd0bb93eea81248e9af45b385672 347 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 172 181 - T 29-03-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.268 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 SUPERFAMILY SSF53067 5 256 1.57E-96 T 29-03-2018 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 Gene3D G3DSA:3.30.420.40 250 503 3.1E-80 T 29-03-2018 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 SUPERFAMILY SSF53067 256 498 1.4E-87 T 29-03-2018 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 1.9E-93 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.5E-62 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 Gene3D G3DSA:3.30.420.40 1 249 3.5E-89 T 29-03-2018 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 PIRSF PIRSF000538 4 503 3.5E-179 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS13580 ee886553758a7f4c4cdc012653d06b0d 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.3E-231 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 Gene3D G3DSA:3.40.50.7700 1 165 1.1E-65 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 SMART SM01001 8 159 8.5E-102 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 Pfam PF00731 AIR carboxylase 10 157 1.3E-63 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 SUPERFAMILY SSF52255 9 165 1.11E-65 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 4.4E-65 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 PIRSF PIRSF001338 5 166 5.2E-67 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CKQ55_RS05745 0f2295a44fa0590788349c7a1b7e8dc5 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.369 T 29-03-2018 IPR033747 Class I PurE CKQ55_RS10535 360b9dd18683046bf562a78d629e3d78 443 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 193 412 8.7E-49 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CKQ55_RS10535 360b9dd18683046bf562a78d629e3d78 443 SUPERFAMILY SSF53187 339 415 1.82E-54 T 29-03-2018 CKQ55_RS10535 360b9dd18683046bf562a78d629e3d78 443 SUPERFAMILY SSF53187 191 287 1.82E-54 T 29-03-2018 CKQ55_RS10535 360b9dd18683046bf562a78d629e3d78 443 Gene3D G3DSA:3.40.630.40 188 419 3.4E-59 T 29-03-2018 CKQ55_RS10535 360b9dd18683046bf562a78d629e3d78 443 SMART SM00646 253 412 1.2E-74 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CKQ55_RS10365 92798ec0fb79e5e61974c05e7873ecab 206 Gene3D G3DSA:1.10.287.460 1 89 2.0E-19 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CKQ55_RS10365 92798ec0fb79e5e61974c05e7873ecab 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 2.2E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CKQ55_RS10365 92798ec0fb79e5e61974c05e7873ecab 206 SUPERFAMILY SSF54534 8 205 7.86E-56 T 29-03-2018 CKQ55_RS10365 92798ec0fb79e5e61974c05e7873ecab 206 Gene3D G3DSA:3.10.50.40 90 206 9.3E-41 T 29-03-2018 CKQ55_RS10365 92798ec0fb79e5e61974c05e7873ecab 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 5.0E-24 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 SMART SM00155 399 426 8.2E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 SMART SM00155 219 246 1.6E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.807 T 29-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 Gene3D G3DSA:3.30.870.10 316 477 1.6E-27 T 29-03-2018 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 Gene3D G3DSA:3.30.870.10 99 288 2.1E-26 T 29-03-2018 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 SUPERFAMILY SSF56024 274 473 2.92E-47 T 29-03-2018 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 SUPERFAMILY SSF56024 66 315 1.07E-44 T 29-03-2018 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 7.1E-7 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 Pfam PF13091 PLD-like domain 134 244 4.0E-12 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 Pfam PF13091 PLD-like domain 332 445 9.3E-23 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS24665 fac646334fbf5ffdc7d82d8eca9ac9e2 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 9.7E-219 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CKQ55_RS13515 3f1259c74a7400c682c483327a144822 156 SUPERFAMILY SSF55804 1 149 1.05E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS13515 3f1259c74a7400c682c483327a144822 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 9.5E-37 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CKQ55_RS13515 3f1259c74a7400c682c483327a144822 156 Gene3D G3DSA:3.40.930.10 1 151 1.6E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS13515 3f1259c74a7400c682c483327a144822 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 4.7E-35 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS10755 f110db8bdea264161a4c9953cf9edd66 191 Gene3D G3DSA:1.10.10.60 2 56 2.7E-5 T 29-03-2018 CKQ55_RS10755 f110db8bdea264161a4c9953cf9edd66 191 SUPERFAMILY SSF46689 3 66 3.03E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10755 f110db8bdea264161a4c9953cf9edd66 191 Gene3D G3DSA:1.10.357.10 57 180 9.8E-14 T 29-03-2018 CKQ55_RS10755 f110db8bdea264161a4c9953cf9edd66 191 SUPERFAMILY SSF48498 88 179 6.0E-5 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS17465 d5c81f197c0b4e4060a7528894a68f3e 577 Pfam PF02272 DHHA1 domain 322 452 1.1E-26 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CKQ55_RS17465 d5c81f197c0b4e4060a7528894a68f3e 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 1.1E-164 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CKQ55_RS17465 d5c81f197c0b4e4060a7528894a68f3e 577 SUPERFAMILY SSF64182 48 465 1.83E-116 T 29-03-2018 CKQ55_RS17465 d5c81f197c0b4e4060a7528894a68f3e 577 Gene3D G3DSA:3.90.1640.10 52 246 2.0E-21 T 29-03-2018 CKQ55_RS17465 d5c81f197c0b4e4060a7528894a68f3e 577 Pfam PF01368 DHH family 74 201 4.6E-8 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS21270 6671af65c4efac97ae6b2d250ec7d24b 326 Gene3D G3DSA:3.40.190.10 124 234 4.0E-10 T 29-03-2018 CKQ55_RS21270 6671af65c4efac97ae6b2d250ec7d24b 326 PIRSF PIRSF017082 1 326 1.0E-77 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 CKQ55_RS21270 6671af65c4efac97ae6b2d250ec7d24b 326 SUPERFAMILY SSF53850 62 232 3.91E-6 T 29-03-2018 CKQ55_RS21270 6671af65c4efac97ae6b2d250ec7d24b 326 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 112 313 5.4E-18 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.9E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.9E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.9E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.9E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 Pfam PF00106 short chain dehydrogenase 3 197 1.2E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 Gene3D G3DSA:3.40.50.720 1 259 3.3E-53 T 29-03-2018 CKQ55_RS19195 f8d82a56b879d0f130c2dc6c3058debc 259 SUPERFAMILY SSF51735 2 258 1.89E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 SUPERFAMILY SSF52922 193 329 1.7E-30 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 SUPERFAMILY SSF52518 4 187 3.53E-48 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 Gene3D G3DSA:3.40.50.920 199 330 9.9E-32 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 Pfam PF02779 Transketolase, pyrimidine binding domain 24 186 7.1E-33 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 SMART SM00861 23 187 8.9E-44 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 Pfam PF02780 Transketolase, C-terminal domain 199 320 2.5E-27 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS03190 48bd909d1efe6f514cd2084c1bdffcdf 330 Gene3D G3DSA:3.40.50.970 3 198 3.9E-39 T 29-03-2018 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 SMART SM00387 347 462 1.2E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 SUPERFAMILY SSF55874 293 449 5.24E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 SMART SM00304 184 237 0.001 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 Gene3D G3DSA:1.10.287.130 228 300 4.1E-13 T 29-03-2018 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 454 1.5E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 Gene3D G3DSA:3.30.565.10 318 478 1.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 Pfam PF00672 HAMP domain 184 231 1.9E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 SMART SM00388 238 304 3.7E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 454 1.5E-121 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 1.4E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 SUPERFAMILY SSF158472 186 230 5.1E-5 T 29-03-2018 CKQ55_RS17595 77f8c8207c809f4122655b3b631c12d4 485 SUPERFAMILY SSF47384 221 304 6.87E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 4.2E-62 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 PIRSF PIRSF000723 1 310 1.5E-119 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 Gene3D G3DSA:3.40.1160.10 1 310 4.1E-57 T 29-03-2018 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 2.9E-113 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 SUPERFAMILY SSF53633 3 308 9.29E-82 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS24330 610ad25bbc2fd493aabd41eaac9c04e6 310 Pfam PF00696 Amino acid kinase family 3 283 2.0E-30 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS16190 fadbb9ea3c2b203b69c41f537a2620d4 196 Pfam PF13580 SIS domain 9 144 3.5E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS16190 fadbb9ea3c2b203b69c41f537a2620d4 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.911 T 29-03-2018 IPR023070 DnaA initiator-associating protein CKQ55_RS16190 fadbb9ea3c2b203b69c41f537a2620d4 196 SUPERFAMILY SSF53697 2 191 3.44E-52 T 29-03-2018 CKQ55_RS16190 fadbb9ea3c2b203b69c41f537a2620d4 196 Gene3D G3DSA:3.40.50.10490 1 196 5.5E-38 T 29-03-2018 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Gene3D G3DSA:2.40.50.140 2 56 1.9E-22 T 29-03-2018 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Pfam PF07499 RuvA, C-terminal domain 159 201 1.2E-14 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 8.9E-71 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Gene3D G3DSA:1.10.150.280 57 81 0.022 T 29-03-2018 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 SUPERFAMILY SSF46929 157 201 7.85E-11 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 SUPERFAMILY SSF50249 2 63 6.28E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 SMART SM00278 73 92 1.3 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 SMART SM00278 108 127 0.053 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.433 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Gene3D G3DSA:1.10.150.20 82 142 8.8E-15 T 29-03-2018 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Gene3D G3DSA:1.10.8.10 157 202 1.8E-14 T 29-03-2018 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 SUPERFAMILY SSF47781 66 137 1.18E-21 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Pfam PF01330 RuvA N terminal domain 2 62 1.1E-18 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CKQ55_RS23680 b6848829845fba1fb62e32c920078ec2 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.5E-16 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 SUPERFAMILY SSF47781 400 550 4.11E-24 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Gene3D G3DSA:1.10.150.20 481 540 6.3E-6 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 29 307 1.6E-21 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Pfam PF14520 Helix-hairpin-helix domain 423 473 0.0011 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 SUPERFAMILY SSF50249 311 389 1.88E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Hamap MF_01587 DNA ligase B [ligB]. 5 558 52.298 T 29-03-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Gene3D G3DSA:1.10.287.610 21 88 2.2E-12 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Gene3D G3DSA:1.10.150.20 409 480 2.2E-10 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Gene3D G3DSA:2.40.50.140 308 380 6.0E-16 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 SUPERFAMILY SSF56091 24 306 1.14E-62 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 387 1.7E-17 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 SMART SM00532 28 425 1.7E-64 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 Gene3D G3DSA:3.30.470.30 128 251 6.2E-16 T 29-03-2018 CKQ55_RS13660 96e9bf15625273a8df2d9af8ce839676 558 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 124 153 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site CKQ55_RS28660 bc92f99850ac49ce3c8d34b536132bdd 70 Pfam PF13619 KTSC domain 7 64 5.0E-21 T 29-03-2018 IPR025309 KTSC domain CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 Gene3D G3DSA:3.40.50.1360 89 252 2.9E-29 T 29-03-2018 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 SUPERFAMILY SSF46785 5 58 5.2E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 Gene3D G3DSA:1.10.10.10 2 63 3.7E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 7.6E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 SMART SM00420 6 58 3.5E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.9E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.9E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 SUPERFAMILY SSF100950 91 248 1.84E-27 T 29-03-2018 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 SMART SM01134 89 249 1.4E-59 T 29-03-2018 CKQ55_RS03885 5578f7a5a922e74c945bfd88d9610400 265 Pfam PF00455 DeoR C terminal sensor domain 91 247 6.6E-49 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 341 2.0E-71 T 29-03-2018 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 Gene3D G3DSA:3.40.50.620 136 343 7.9E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 Gene3D G3DSA:3.40.630.30 5 122 8.4E-7 T 29-03-2018 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 SUPERFAMILY SSF52374 308 340 1.32E-21 T 29-03-2018 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 SUPERFAMILY SSF52374 150 269 1.32E-21 T 29-03-2018 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 10 344 3.2E-113 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 153 207 1.7E-10 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 SMART SM00764 150 338 1.0E-113 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 PIRSF PIRSF005751 3 354 1.1E-121 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 Pfam PF08218 Citrate lyase ligase C-terminal domain 150 338 1.3E-77 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CKQ55_RS01540 a3fe71f26a471df43bfc0ba4e7329425 357 SUPERFAMILY SSF55729 40 115 1.48E-9 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 Gene3D G3DSA:1.10.10.60 184 230 2.5E-13 T 29-03-2018 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 SUPERFAMILY SSF46689 234 286 4.12E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 Pfam PF12833 Helix-turn-helix domain 206 283 1.5E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 Gene3D G3DSA:1.10.10.60 231 290 1.5E-13 T 29-03-2018 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 SUPERFAMILY SSF46689 183 231 1.37E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 Pfam PF02311 AraC-like ligand binding domain 43 159 7.4E-13 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 SUPERFAMILY SSF51215 44 148 1.44E-15 T 29-03-2018 CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 Gene3D G3DSA:2.60.120.10 11 183 4.8E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS29480 eab90bd81d774e413d9a2ebdf0ce44e3 324 SMART SM00342 198 281 3.8E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-33 T 29-03-2018 CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 SMART SM00448 2 112 3.9E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 Pfam PF00072 Response regulator receiver domain 4 112 2.8E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 SUPERFAMILY SSF52172 3 176 8.3E-37 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 2.5E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 Gene3D G3DSA:1.10.10.10 122 225 1.1E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03845 5e37b8becddf8c47346f1d254fe0cb53 225 SMART SM00862 147 223 6.8E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS14130 81c19213d9ec637c4b859a53b81a6700 189 SUPERFAMILY SSF48150 1 183 3.92E-81 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CKQ55_RS14130 81c19213d9ec637c4b859a53b81a6700 189 Pfam PF03352 Methyladenine glycosylase 6 181 4.8E-80 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CKQ55_RS14130 81c19213d9ec637c4b859a53b81a6700 189 Gene3D G3DSA:1.10.340.30 1 182 2.7E-83 T 29-03-2018 CKQ55_RS14130 81c19213d9ec637c4b859a53b81a6700 189 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 2.0E-89 T 29-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 SMART SM00833 224 317 4.3E-10 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 Gene3D G3DSA:3.40.50.300 1 202 1.3E-45 T 29-03-2018 CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 SUPERFAMILY SSF90002 224 315 8.89E-25 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 Gene3D G3DSA:3.30.1220.10 207 318 8.7E-20 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 SUPERFAMILY SSF52540 3 202 7.19E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 2.6E-18 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CKQ55_RS09125 fe87ecbafc1568e336ce4c659fd6da4b 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 183 6.2E-50 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 SUPERFAMILY SSF53137 14 129 6.47E-48 T 29-03-2018 CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.9E-55 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 PIRSF PIRSF002131 1 129 1.1E-52 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.669 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 Pfam PF00411 Ribosomal protein S11 19 128 2.3E-54 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15430 334126bb30cc7e3e36e6b81e8d6b434e 129 Gene3D G3DSA:3.30.420.80 5 129 2.7E-45 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 SUPERFAMILY SSF51445 7 372 1.58E-113 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 Pfam PF08533 Beta-galactosidase C-terminal domain 626 682 5.8E-13 T 29-03-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 Gene3D G3DSA:3.20.20.80 12 382 6.2E-86 T 29-03-2018 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 Pfam PF08532 Beta-galactosidase trimerisation domain 403 615 6.8E-75 T 29-03-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 PIRSF PIRSF001084 6 684 2.8E-245 T 29-03-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 Gene3D G3DSA:3.40.50.880 400 619 1.9E-58 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 Gene3D G3DSA:2.60.40.1180 624 683 4.3E-15 T 29-03-2018 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 Pfam PF02449 Beta-galactosidase 19 392 6.7E-154 T 29-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS06020 93293b5a554e06f1941e3fb34fcf0796 685 SUPERFAMILY SSF52317 401 615 9.61E-60 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SMART SM00341 529 608 3.6E-27 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SMART SM00487 22 218 1.7E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SUPERFAMILY SSF47819 530 605 1.44E-25 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Pfam PF09382 RQC domain 406 514 9.6E-36 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Pfam PF16124 RecQ zinc-binding 343 404 8.1E-15 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Gene3D G3DSA:1.10.150.80 525 608 3.4E-26 T 29-03-2018 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Pfam PF00270 DEAD/DEAH box helicase 28 187 1.6E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SMART SM00490 250 331 1.8E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SUPERFAMILY SSF52540 208 455 2.72E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 2.4E-274 T 29-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 3.3E-204 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Pfam PF00271 Helicase conserved C-terminal domain 223 330 1.3E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Gene3D G3DSA:1.10.10.10 404 524 8.1E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Gene3D G3DSA:3.40.50.300 210 403 1.0E-48 T 29-03-2018 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Pfam PF00570 HRDC domain 533 599 3.9E-24 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 Gene3D G3DSA:3.40.50.300 1 208 3.9E-39 T 29-03-2018 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SMART SM00956 411 514 2.5E-49 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CKQ55_RS11815 fce5833eb96d9944389a4781ba3226ea 608 SUPERFAMILY SSF52540 9 200 6.75E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 SUPERFAMILY SSF52518 357 557 1.97E-60 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 Gene3D G3DSA:3.40.50.970 339 535 2.2E-42 T 29-03-2018 CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.2E-41 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 Gene3D G3DSA:3.40.50.1220 190 338 2.0E-33 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 SUPERFAMILY SSF52467 182 352 1.01E-42 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 SUPERFAMILY SSF52518 2 176 9.82E-43 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 Gene3D G3DSA:3.40.50.970 1 189 2.7E-43 T 29-03-2018 CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 3.4E-29 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS02315 33c70ad38e764908c1d4c0a8edd75400 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.8E-40 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 19 514 2.2E-77 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 SUPERFAMILY SSF69255 383 473 2.38E-26 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 Gene3D G3DSA:4.10.180.10 297 312 1.5E-7 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 Pfam PF05954 Phage late control gene D protein (GPD) 33 354 1.9E-60 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 612 756 7.7E-38 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 517 4.0E-149 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 491 594 5.2E-35 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 SUPERFAMILY SSF69279 15 202 9.64E-50 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 SUPERFAMILY SSF69349 463 566 1.18E-5 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 SUPERFAMILY SSF69349 626 694 1.18E-5 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 Gene3D G3DSA:3.55.50.10 111 207 2.7E-26 T 29-03-2018 CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 Gene3D G3DSA:2.40.50.230 389 473 3.0E-22 T 29-03-2018 IPR006531 Gp5 N-terminal CKQ55_RS28970 50621e3fae3d635cc8160d476c09f903 831 SUPERFAMILY SSF69279 203 381 2.47E-43 T 29-03-2018 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.6E-12 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 93 107 7.6E-12 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.6E-12 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.6E-12 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 29-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 SUPERFAMILY SSF53597 2 156 7.07E-43 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 Pfam PF00186 Dihydrofolate reductase 2 155 5.0E-37 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS02680 cebb0ac768a7a9c6dd505ba4bc427163 157 Gene3D G3DSA:3.40.430.10 1 155 1.0E-31 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS03675 73391c142d963f65533422d69096f5f0 200 SUPERFAMILY SSF52540 11 200 2.21E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03675 73391c142d963f65533422d69096f5f0 200 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 200 8.9E-74 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS03675 73391c142d963f65533422d69096f5f0 200 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 200 3.0E-61 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS03675 73391c142d963f65533422d69096f5f0 200 Gene3D G3DSA:3.40.50.300 10 200 1.0E-71 T 29-03-2018 CKQ55_RS03675 73391c142d963f65533422d69096f5f0 200 PIRSF PIRSF015617 6 200 1.6E-68 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 Gene3D G3DSA:3.40.50.1000 73 215 1.6E-27 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.8E-25 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 Gene3D G3DSA:3.40.50.1000 1 32 0.097 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 Gene3D G3DSA:1.10.150.240 33 72 3.9E-15 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 1.2E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 1.2E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 1.2E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 181 2.4E-15 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS21085 870e7ab1f27e52d60acb0d86ae6d1e5c 219 SUPERFAMILY SSF56784 4 203 9.47E-45 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS02910 2038e530cece824788ada270267abcb8 141 Pfam PF06254 Putative bacterial toxin ydaT 49 95 2.3E-10 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT CKQ55_RS02910 2038e530cece824788ada270267abcb8 141 Gene3D G3DSA:1.10.3600.10 4 115 6.2E-32 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT CKQ55_RS31000 0e4dd2f284ad56e3737263f53143249e 669 Gene3D G3DSA:3.90.1530.10 25 133 5.8E-18 T 29-03-2018 CKQ55_RS31000 0e4dd2f284ad56e3737263f53143249e 669 SUPERFAMILY SSF110849 37 135 5.41E-13 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS31000 0e4dd2f284ad56e3737263f53143249e 669 Gene3D G3DSA:1.10.10.730 134 180 7.8E-8 T 29-03-2018 CKQ55_RS31000 0e4dd2f284ad56e3737263f53143249e 669 SMART SM00470 37 133 1.7E-22 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS31000 0e4dd2f284ad56e3737263f53143249e 669 SUPERFAMILY SSF109709 127 218 9.42E-18 T 29-03-2018 CKQ55_RS31000 0e4dd2f284ad56e3737263f53143249e 669 Pfam PF02195 ParB-like nuclease domain 38 132 4.0E-16 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS21455 86c6748b398001ccf2f766ce07cc868a 163 Hamap MF_00706 Ecotin [eco]. 1 163 39.093 T 29-03-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CKQ55_RS21455 86c6748b398001ccf2f766ce07cc868a 163 PIRSF PIRSF006865 2 163 1.7E-64 T 29-03-2018 IPR005658 Proteinase inhibitor I11, ecotin CKQ55_RS21455 86c6748b398001ccf2f766ce07cc868a 163 SUPERFAMILY SSF49772 27 162 4.19E-56 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CKQ55_RS21455 86c6748b398001ccf2f766ce07cc868a 163 Gene3D G3DSA:4.10.1230.10 106 160 1.7E-26 T 29-03-2018 IPR027438 Ecotin, C-terminal CKQ55_RS21455 86c6748b398001ccf2f766ce07cc868a 163 Gene3D G3DSA:2.60.40.550 28 100 5.9E-36 T 29-03-2018 CKQ55_RS21455 86c6748b398001ccf2f766ce07cc868a 163 Pfam PF03974 Ecotin 31 153 6.9E-53 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CKQ55_RS03440 b903d15150ceca465af7e382ae11c070 331 SUPERFAMILY SSF50974 3 73 2.62E-6 T 29-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CKQ55_RS03440 b903d15150ceca465af7e382ae11c070 331 SUPERFAMILY SSF50974 68 330 1.57E-50 T 29-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CKQ55_RS03440 b903d15150ceca465af7e382ae11c070 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 55.961 T 29-03-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CKQ55_RS03440 b903d15150ceca465af7e382ae11c070 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 6.4E-87 T 29-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CKQ55_RS03440 b903d15150ceca465af7e382ae11c070 331 Gene3D G3DSA:2.130.10.10 2 331 1.1E-49 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 Gene3D G3DSA:3.40.50.720 75 197 2.9E-28 T 29-03-2018 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 Gene3D G3DSA:3.40.50.720 1 74 3.2E-6 T 29-03-2018 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 SUPERFAMILY SSF48179 204 374 1.12E-45 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 SUPERFAMILY SSF51735 1 203 2.92E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 41.527 T 29-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 Gene3D G3DSA:1.10.1040.10 207 382 4.2E-48 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 5.7E-26 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS13885 e7fea179bee2ceedc4a16690f4e60524 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 149 372 1.3E-70 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 Gene3D G3DSA:1.10.340.30 25 116 1.0E-22 T 29-03-2018 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.378 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 PIRSF PIRSF001435 1 210 4.2E-50 T 29-03-2018 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 SMART SM00525 186 206 1.6E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.8E-7 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 Gene3D G3DSA:1.10.1670.10 117 210 1.3E-29 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 7.9E-19 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.3E-89 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 SMART SM00478 38 185 1.4E-52 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 4.3E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CKQ55_RS25715 4a8fb1450d1a34bf9b314ece469143dd 211 SUPERFAMILY SSF48150 2 208 2.98E-73 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.4E-46 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.4E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Gene3D G3DSA:2.40.30.10 281 387 3.0E-21 T 29-03-2018 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Gene3D G3DSA:3.40.50.300 8 280 7.0E-37 T 29-03-2018 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 SUPERFAMILY SSF54980 393 468 3.45E-17 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.609 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 SUPERFAMILY SSF50447 262 393 1.23E-27 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Gene3D G3DSA:3.30.70.870 394 469 9.2E-11 T 29-03-2018 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.4E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 SUPERFAMILY SSF52540 10 277 6.7E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08820 d41c701428154e63d0079219ad946298 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.4E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 Gene3D G3DSA:1.10.10.60 272 326 1.0E-12 T 29-03-2018 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 Gene3D G3DSA:3.40.50.880 1 235 5.6E-55 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 Pfam PF12833 Helix-turn-helix domain 240 319 4.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 SMART SM00342 234 317 2.4E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 SUPERFAMILY SSF46689 220 267 7.17E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 Gene3D G3DSA:1.10.10.60 236 271 8.8E-13 T 29-03-2018 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 SUPERFAMILY SSF46689 271 321 6.72E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 Pfam PF01965 DJ-1/PfpI family 2 179 5.4E-20 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS28405 5be3fd28f2c34176edd2c8ec8dd7643c 326 SUPERFAMILY SSF52317 1 199 1.48E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.0E-122 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 Gene3D G3DSA:3.40.630.10 170 500 1.2E-132 T 29-03-2018 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.21 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 SUPERFAMILY SSF52949 1 184 1.06E-51 T 29-03-2018 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 Gene3D G3DSA:3.40.220.10 1 157 1.3E-30 T 29-03-2018 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 8.8E-34 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS10010 655bf4de82af0f5917f3a9056dcd3407 503 SUPERFAMILY SSF53187 180 496 5.02E-124 T 29-03-2018 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 Gene3D G3DSA:3.40.50.1370 5 163 5.7E-56 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 SUPERFAMILY SSF53671 2 333 6.94E-100 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 2.1E-55 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.2E-135 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 Gene3D G3DSA:3.40.50.1370 164 334 5.2E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.1E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.1E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.1E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 2.1E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.008 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.3E-47 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS10045 4dbcfdbf757f6a98504d4bbb99fdaef7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.9E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS27960 acbae7e0217a1d225eea33cea206cfad 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 9.2E-19 T 29-03-2018 CKQ55_RS27960 acbae7e0217a1d225eea33cea206cfad 172 SUPERFAMILY SSF55729 3 166 3.72E-34 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS27960 acbae7e0217a1d225eea33cea206cfad 172 Gene3D G3DSA:3.40.630.30 1 169 6.2E-34 T 29-03-2018 CKQ55_RS05005 0a039f09f4aa945766d9fcc2d3c9c4b6 317 Pfam PF00248 Aldo/keto reductase family 15 315 9.2E-72 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS05005 0a039f09f4aa945766d9fcc2d3c9c4b6 317 Gene3D G3DSA:3.20.20.100 1 317 4.0E-84 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS05005 0a039f09f4aa945766d9fcc2d3c9c4b6 317 SUPERFAMILY SSF51430 1 315 5.76E-91 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.7E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 SMART SM00490 259 340 2.3E-31 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 SMART SM00487 20 223 2.0E-63 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 Gene3D G3DSA:3.40.50.300 7 223 4.7E-62 T 29-03-2018 CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 Gene3D G3DSA:3.40.50.300 224 448 3.6E-46 T 29-03-2018 CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 SUPERFAMILY SSF52540 1 210 3.38E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 Pfam PF00271 Helicase conserved C-terminal domain 235 339 8.0E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 SUPERFAMILY SSF52540 147 355 7.05E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03185 ec1bd50c07ff35c2aa8ec25e5680081c 449 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 445 51.912 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CKQ55_RS27990 f3f02121840d18fef2a7352838a1b65d 256 Gene3D G3DSA:3.40.50.1820 10 250 1.0E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27990 f3f02121840d18fef2a7352838a1b65d 256 Pfam PF12697 Alpha/beta hydrolase family 25 243 1.2E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS27990 f3f02121840d18fef2a7352838a1b65d 256 SUPERFAMILY SSF53474 17 248 5.8E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27990 f3f02121840d18fef2a7352838a1b65d 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 2.9E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS27990 f3f02121840d18fef2a7352838a1b65d 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.9E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS27500 812504da62c196ef19f4867a2b71f369 155 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 139 2.7E-33 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 SUPERFAMILY SSF55666 153 237 4.32E-26 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.9E-24 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.741 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 SUPERFAMILY SSF54211 1 181 3.95E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.5E-114 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 Gene3D G3DSA:3.30.230.70 1 238 1.2E-61 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS13680 8f7b9043320d6e68e581e5e8161cdca3 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 1.4E-12 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 Gene3D G3DSA:1.10.645.10 175 381 9.0E-45 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 8.0E-25 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 SUPERFAMILY SSF56762 193 537 7.06E-109 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 6.4E-13 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 468 537 7.4E-11 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 2.5E-34 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 SUPERFAMILY SSF143243 9 194 4.45E-47 T 29-03-2018 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 Gene3D G3DSA:1.10.645.10 382 535 9.9E-31 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19105 11c0259d3e2e3d064807fee664bfb15e 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 3.0E-27 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25775 1d2196d02a5c3ae3d8107d1164f1a739 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 7.2E-112 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CKQ55_RS25775 1d2196d02a5c3ae3d8107d1164f1a739 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.307 T 29-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CKQ55_RS25775 1d2196d02a5c3ae3d8107d1164f1a739 333 Gene3D G3DSA:3.20.20.140 4 333 1.2E-76 T 29-03-2018 CKQ55_RS25775 1d2196d02a5c3ae3d8107d1164f1a739 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.8E-100 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CKQ55_RS25775 1d2196d02a5c3ae3d8107d1164f1a739 333 SUPERFAMILY SSF51556 6 326 9.91E-78 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS16810 9e1c7501e9e1c3d4926ebc20463019d4 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 2.5E-20 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS16810 9e1c7501e9e1c3d4926ebc20463019d4 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 8.0E-23 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CKQ55_RS16810 9e1c7501e9e1c3d4926ebc20463019d4 275 Gene3D G3DSA:3.60.21.10 8 272 2.9E-40 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS16810 9e1c7501e9e1c3d4926ebc20463019d4 275 SUPERFAMILY SSF56300 16 270 3.01E-60 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS16810 9e1c7501e9e1c3d4926ebc20463019d4 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 41.674 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CKQ55_RS13440 8140c93c083471d26cc5599f7aa0d660 259 Gene3D G3DSA:3.60.15.10 1 259 3.6E-24 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS13440 8140c93c083471d26cc5599f7aa0d660 259 SMART SM00849 7 221 0.0097 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS13440 8140c93c083471d26cc5599f7aa0d660 259 Pfam PF12706 Beta-lactamase superfamily domain 20 222 2.0E-12 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS13440 8140c93c083471d26cc5599f7aa0d660 259 SUPERFAMILY SSF56281 1 242 9.7E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 449 4.5E-145 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 Pfam PF00696 Amino acid kinase family 4 277 2.6E-47 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 PIRSF PIRSF000726 2 449 2.7E-157 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 SUPERFAMILY SSF53633 4 292 1.57E-76 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 SUPERFAMILY SSF55021 297 393 1.15E-15 T 29-03-2018 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 Gene3D G3DSA:3.30.70.260 372 449 4.3E-15 T 29-03-2018 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 2.9E-134 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 SUPERFAMILY SSF55021 377 448 5.72E-14 T 29-03-2018 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 Gene3D G3DSA:3.30.70.260 284 368 6.0E-20 T 29-03-2018 CKQ55_RS11265 4fcf9e28500c1deab5f4dad9e41fbd37 449 Gene3D G3DSA:3.40.1160.10 1 283 6.0E-62 T 29-03-2018 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 Gene3D G3DSA:1.10.40.60 216 278 3.4E-19 T 29-03-2018 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 Gene3D G3DSA:1.10.40.60 100 214 4.2E-32 T 29-03-2018 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 SUPERFAMILY SSF158544 215 282 3.4E-16 T 29-03-2018 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 Pfam PF03934 Type II secretion system (T2SS), protein K 32 310 8.2E-81 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 SUPERFAMILY SSF158544 102 210 2.56E-30 T 29-03-2018 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 PIRSF PIRSF002786 1 324 4.5E-78 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 SUPERFAMILY SSF54523 281 319 5.02E-24 T 29-03-2018 CKQ55_RS07785 3780e2fb32c96d96a0340ee9760aabe0 326 SUPERFAMILY SSF54523 37 101 5.02E-24 T 29-03-2018 CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 Pfam PF08402 TOBE domain 281 353 5.2E-12 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 SUPERFAMILY SSF50331 236 364 1.46E-31 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 Gene3D G3DSA:2.40.50.140 294 346 7.3E-10 T 29-03-2018 CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 SMART SM00382 28 211 7.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 SUPERFAMILY SSF52540 4 243 2.73E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 Gene3D G3DSA:2.40.50.100 252 293 1.2E-11 T 29-03-2018 CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 Gene3D G3DSA:3.40.50.300 1 251 5.3E-70 T 29-03-2018 CKQ55_RS11190 ab7664548570abeb18eae75b73ba8f6a 369 Pfam PF00005 ABC transporter 20 161 5.4E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 Gene3D G3DSA:3.40.630.10 2 408 3.8E-45 T 29-03-2018 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 Pfam PF07687 Peptidase dimerisation domain 209 309 9.2E-5 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 8 403 2.4E-96 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 Pfam PF01546 Peptidase family M20/M25/M40 143 402 1.2E-10 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 SUPERFAMILY SSF53187 8 213 6.01E-71 T 29-03-2018 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 SUPERFAMILY SSF53187 325 406 6.01E-71 T 29-03-2018 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 PIRSF PIRSF037215 4 409 2.4E-144 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CKQ55_RS28105 9d80219d6b81357b43f903f752ffd1b4 409 SUPERFAMILY SSF55031 212 322 7.32E-31 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS31045 5f2c2cc1f108110096ed21151ed5001e 276 Pfam PF02384 N-6 DNA Methylase 137 238 1.1E-8 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CKQ55_RS31045 5f2c2cc1f108110096ed21151ed5001e 276 Gene3D G3DSA:3.40.50.150 137 261 6.7E-9 T 29-03-2018 CKQ55_RS31045 5f2c2cc1f108110096ed21151ed5001e 276 SUPERFAMILY SSF53335 118 236 2.22E-16 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS10840 135485191be83d7933fdac2d75b50bc3 194 PIRSF PIRSF020680 1 194 1.1E-64 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CKQ55_RS10840 135485191be83d7933fdac2d75b50bc3 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 7.1E-63 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CKQ55_RS10840 135485191be83d7933fdac2d75b50bc3 194 SUPERFAMILY SSF159709 13 193 1.44E-58 T 29-03-2018 CKQ55_RS10840 135485191be83d7933fdac2d75b50bc3 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 7.6E-59 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 SUPERFAMILY SSF47729 1 90 2.5E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.8E-32 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 Gene3D G3DSA:4.10.520.10 1 90 2.9E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 SMART SM00411 1 90 1.1E-41 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS06185 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS11785 a9d795c3dabc84e5694510c302226384 299 Pfam PF00892 EamA-like transporter family 139 274 2.2E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS11785 a9d795c3dabc84e5694510c302226384 299 Pfam PF00892 EamA-like transporter family 2 128 9.5E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS11785 a9d795c3dabc84e5694510c302226384 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.9E-87 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 CKQ55_RS11785 a9d795c3dabc84e5694510c302226384 299 SUPERFAMILY SSF103481 35 130 9.42E-6 T 29-03-2018 CKQ55_RS11785 a9d795c3dabc84e5694510c302226384 299 SUPERFAMILY SSF103481 182 278 9.68E-7 T 29-03-2018 CKQ55_RS08830 323654131f0465e2259e334c690a3065 148 SUPERFAMILY SSF55729 3 146 6.42E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS08830 323654131f0465e2259e334c690a3065 148 Pfam PF00583 Acetyltransferase (GNAT) family 24 120 6.5E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS08830 323654131f0465e2259e334c690a3065 148 Gene3D G3DSA:3.40.630.30 1 148 2.7E-32 T 29-03-2018 CKQ55_RS08830 323654131f0465e2259e334c690a3065 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 3.1E-43 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 Gene3D G3DSA:3.90.226.10 9 316 1.5E-68 T 29-03-2018 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.677 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 SUPERFAMILY SSF52096 5 318 8.18E-104 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 3.3E-173 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS07530 1b4e652725824353d3e5d506e6d341ce 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 7.9E-62 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 3.6E-20 T 29-03-2018 IPR025877 MobA-like NTP transferase CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 SUPERFAMILY SSF53448 5 252 2.09E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 SUPERFAMILY SSF51161 256 439 3.14E-53 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.132 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.001 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 3.0E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 0.0026 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.4E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 3.2E-205 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Gene3D G3DSA:2.160.10.10 312 440 6.2E-38 T 29-03-2018 CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Gene3D G3DSA:2.160.10.10 251 311 1.4E-10 T 29-03-2018 CKQ55_RS12950 eebe91616c2028dd8bfef7545c7280df 456 Gene3D G3DSA:3.90.550.10 1 250 2.5E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS02920 d2138aaabb67541e6f7b1441f4da6cc3 134 SMART SM00530 9 64 3.4E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS02920 d2138aaabb67541e6f7b1441f4da6cc3 134 Pfam PF01381 Helix-turn-helix 11 64 8.1E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS02920 d2138aaabb67541e6f7b1441f4da6cc3 134 SUPERFAMILY SSF47413 3 72 1.82E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS02920 d2138aaabb67541e6f7b1441f4da6cc3 134 Gene3D G3DSA:1.10.260.40 1 134 3.3E-19 T 29-03-2018 CKQ55_RS24135 4df909b677793de9212939debac3ffce 304 SUPERFAMILY SSF52317 5 159 2.98E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS24135 4df909b677793de9212939debac3ffce 304 Gene3D G3DSA:3.40.50.10740 2 141 4.8E-40 T 29-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CKQ55_RS24135 4df909b677793de9212939debac3ffce 304 SUPERFAMILY SSF141986 139 288 5.49E-42 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CKQ55_RS24135 4df909b677793de9212939debac3ffce 304 PIRSF PIRSF028757 1 300 7.8E-79 T 29-03-2018 IPR003507 Peptidase family S66 CKQ55_RS24135 4df909b677793de9212939debac3ffce 304 Gene3D G3DSA:3.50.30.60 142 299 1.2E-40 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CKQ55_RS24135 4df909b677793de9212939debac3ffce 304 Pfam PF02016 LD-carboxypeptidase 6 283 8.3E-68 T 29-03-2018 IPR003507 Peptidase family S66 CKQ55_RS08835 03b327f04b1650254f79640cec0878b2 137 PIRSF PIRSF029225 2 131 7.5E-46 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08835 03b327f04b1650254f79640cec0878b2 137 SUPERFAMILY SSF102220 27 135 4.32E-33 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08835 03b327f04b1650254f79640cec0878b2 137 Pfam PF03603 DNA polymerase III psi subunit 3 126 1.0E-43 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08835 03b327f04b1650254f79640cec0878b2 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 4.5E-49 T 29-03-2018 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08835 03b327f04b1650254f79640cec0878b2 137 Gene3D G3DSA:3.40.50.10220 35 129 4.3E-32 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08835 03b327f04b1650254f79640cec0878b2 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 3.0E-31 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 7.3E-24 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 Gene3D G3DSA:3.30.70.260 2 87 6.5E-24 T 29-03-2018 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 Gene3D G3DSA:3.30.70.1150 88 161 6.8E-25 T 29-03-2018 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 SUPERFAMILY SSF55021 2 74 1.36E-22 T 29-03-2018 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 SUPERFAMILY SSF55021 79 162 2.67E-26 T 29-03-2018 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 Pfam PF13710 ACT domain 12 73 3.1E-16 T 29-03-2018 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 9.0E-36 T 29-03-2018 CKQ55_RS08195 6716317a81d9f69edd708eee5c4c31a0 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.9E-68 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 SMART SM00861 354 524 5.6E-68 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 Gene3D G3DSA:3.40.50.970 364 539 6.3E-43 T 29-03-2018 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 1.6E-47 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 Gene3D G3DSA:3.40.50.970 1 363 3.5E-122 T 29-03-2018 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 SUPERFAMILY SSF52922 532 663 7.85E-41 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 4.4E-171 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 SUPERFAMILY SSF52518 334 524 6.22E-68 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 Gene3D G3DSA:3.40.50.920 540 659 2.7E-29 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 661 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 SUPERFAMILY SSF52518 4 328 1.79E-117 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS20450 378b8cedb865219e834eac4983e7630c 664 Pfam PF02780 Transketolase, C-terminal domain 541 654 8.5E-20 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 SUPERFAMILY SSF63520 311 417 2.09E-19 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Gene3D G3DSA:1.10.10.10 1 68 2.2E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Gene3D G3DSA:1.10.10.10 90 159 2.0E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Pfam PF08279 HTH domain 7 64 3.4E-10 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 SUPERFAMILY SSF52794 421 505 9.94E-12 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 SUPERFAMILY SSF46785 2 48 1.26E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Gene3D G3DSA:1.10.1790.10 199 298 1.4E-16 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Gene3D G3DSA:3.40.50.2300 418 508 3.3E-19 T 29-03-2018 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Gene3D G3DSA:1.10.1790.10 310 417 3.0E-23 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 SUPERFAMILY SSF63520 192 294 2.88E-17 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Pfam PF05043 Mga helix-turn-helix domain 92 169 4.3E-7 T 29-03-2018 IPR007737 Mga helix-turn-helix domain CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Pfam PF00874 PRD domain 209 294 2.7E-11 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS13510 829759fc7f186712cdb9f293ea7364f7 523 Pfam PF00874 PRD domain 323 413 1.3E-16 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 8.8E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 Gene3D G3DSA:3.40.190.10 172 272 7.8E-5 T 29-03-2018 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 Pfam PF03466 LysR substrate binding domain 136 297 1.4E-11 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 SUPERFAMILY SSF46785 8 88 1.84E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 9.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 9.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 9.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 SUPERFAMILY SSF53850 125 295 1.65E-17 T 29-03-2018 CKQ55_RS04240 8c7799815ce0105d95d5659f4768035b 303 Gene3D G3DSA:1.10.10.10 6 88 9.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 Gene3D G3DSA:3.30.930.10 7 327 4.2E-91 T 29-03-2018 CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 SUPERFAMILY SSF46589 14 99 2.09E-22 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.0E-118 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.5E-25 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 4.2E-107 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 SUPERFAMILY SSF55681 92 327 8.7E-82 T 29-03-2018 CKQ55_RS24795 7de8064b02ffc28ec65de75f40dbe97c 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.912 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 Pfam PF03472 Autoinducer binding domain 26 161 4.3E-31 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 SMART SM00421 177 234 7.1E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 SUPERFAMILY SSF75516 8 170 1.09E-33 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 SUPERFAMILY SSF46894 164 240 8.16E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 Gene3D G3DSA:1.10.10.10 176 240 1.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 7.4E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 Gene3D G3DSA:3.30.450.80 1 175 1.7E-40 T 29-03-2018 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 8.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 8.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 8.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23470 eee41f2efa814aa90a36d20d1404abd4 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24040 8bf0213dc171ad5a62a8096d624600fb 231 Pfam PF00814 Glycoprotease family 28 132 5.0E-28 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS24040 8bf0213dc171ad5a62a8096d624600fb 231 SUPERFAMILY SSF53067 108 217 4.14E-30 T 29-03-2018 CKQ55_RS24040 8bf0213dc171ad5a62a8096d624600fb 231 Gene3D G3DSA:3.30.420.40 144 231 2.1E-4 T 29-03-2018 CKQ55_RS24040 8bf0213dc171ad5a62a8096d624600fb 231 SUPERFAMILY SSF53067 3 106 1.25E-29 T 29-03-2018 CKQ55_RS24040 8bf0213dc171ad5a62a8096d624600fb 231 Gene3D G3DSA:3.30.420.40 1 138 2.7E-39 T 29-03-2018 CKQ55_RS24040 8bf0213dc171ad5a62a8096d624600fb 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 3.5E-69 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CKQ55_RS22925 e690a6be4a613a2e2e9f02230c234b3c 111 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 1.0E-42 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CKQ55_RS22925 e690a6be4a613a2e2e9f02230c234b3c 111 Pfam PF04363 Protein of unknown function (DUF496) 8 99 7.3E-46 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CKQ55_RS22925 e690a6be4a613a2e2e9f02230c234b3c 111 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.695 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CKQ55_RS22925 e690a6be4a613a2e2e9f02230c234b3c 111 PIRSF PIRSF028773 1 111 4.0E-54 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 Gene3D G3DSA:3.40.190.10 180 262 3.4E-10 T 29-03-2018 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 SUPERFAMILY SSF53850 89 294 4.81E-29 T 29-03-2018 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 SUPERFAMILY SSF46785 1 86 3.48E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.4E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 Gene3D G3DSA:3.40.190.10 91 179 3.1E-12 T 29-03-2018 CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 Gene3D G3DSA:1.10.10.10 1 83 1.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23090 f307ea8531e07e71edaa214156b930fd 305 Pfam PF03466 LysR substrate binding domain 87 288 6.8E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS30305 ee359cbd5694666246bee24496590f8d 221 Pfam PF00665 Integrase core domain 54 169 4.3E-28 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CKQ55_RS30305 ee359cbd5694666246bee24496590f8d 221 SUPERFAMILY SSF53098 47 209 1.05E-35 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS30305 ee359cbd5694666246bee24496590f8d 221 Gene3D G3DSA:3.30.420.10 45 220 5.3E-35 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS04095 9a11f4056ec3896cea5182f00cf11ed3 160 Gene3D G3DSA:2.20.25.10 140 157 0.014 T 29-03-2018 CKQ55_RS04095 9a11f4056ec3896cea5182f00cf11ed3 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 5.9E-53 T 29-03-2018 IPR009912 Zinc-ribbon containing domain CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 SUPERFAMILY SSF55604 7 80 2.75E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 Gene3D G3DSA:3.30.1360.60 4 80 2.6E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 1.6E-50 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 9.6E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 1.1E-94 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 448 3.2E-197 T 29-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS05060 33a5f33b78202e1ba173603de919df4a 456 Pfam PF00367 phosphotransferase system, EIIB 9 41 6.4E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS07225 b5ed007af3b1e42123771abec0e3ce21 341 SUPERFAMILY SSF53448 2 256 3.94E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS07225 b5ed007af3b1e42123771abec0e3ce21 341 Pfam PF00535 Glycosyl transferase family 2 9 164 1.3E-15 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS07225 b5ed007af3b1e42123771abec0e3ce21 341 Gene3D G3DSA:3.90.550.10 5 221 1.3E-33 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 2.5E-95 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 38 49 7.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 4.7E-153 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 SUPERFAMILY SSF51735 1 344 4.57E-94 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 Gene3D G3DSA:3.40.50.720 1 229 1.6E-61 T 29-03-2018 CKQ55_RS22665 ec7c94a3dc1e5324b1954f598007c195 354 Gene3D G3DSA:3.90.25.10 230 336 5.8E-28 T 29-03-2018 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 Gene3D G3DSA:3.20.19.10 652 890 5.4E-93 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 Pfam PF00694 Aconitase C-terminal domain 691 818 4.5E-49 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 2.0E-183 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 Gene3D G3DSA:3.30.499.10 30 239 5.2E-73 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 217 232 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 431 442 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 293 306 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 493 506 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 203 216 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 279 292 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 146 159 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 170 178 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 PRINTS PR00415 Aconitase family signature 372 386 3.5E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 Gene3D G3DSA:3.30.499.10 372 576 7.5E-63 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 29-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 SUPERFAMILY SSF53732 10 625 4.05E-225 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 Gene3D G3DSA:3.40.1060.10 240 371 6.4E-45 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 SUPERFAMILY SSF52016 630 889 6.08E-89 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS29435 dc4749a7873adcca2c7360683bdeb8d9 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.349 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 Pfam PF17384 RimP C-terminal SH3 domain 85 150 4.7E-22 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 SUPERFAMILY SSF74942 83 150 6.67E-17 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 Gene3D G3DSA:2.30.30.180 87 147 3.4E-18 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 Gene3D G3DSA:3.30.300.70 1 79 1.5E-26 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 SUPERFAMILY SSF75420 3 82 1.83E-24 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CKQ55_RS16075 7ab588771718744f8da17d9271ece7b8 150 Pfam PF02576 RimP N-terminal domain 13 82 8.6E-28 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 Pfam PF00162 Phosphoglycerate kinase 6 373 8.0E-140 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 Gene3D G3DSA:3.40.50.1260 175 371 1.3E-75 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 PIRSF PIRSF000724 1 387 1.5E-133 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 SUPERFAMILY SSF53748 3 383 1.18E-144 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.06 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17250 ba811be6f1929cec20ea51ad0b8dcccb 387 Gene3D G3DSA:3.40.50.1260 3 174 4.7E-61 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS20095 e6ed70f2b798d7ef101d4305ca64c60f 212 Pfam PF06226 Protein of unknown function (DUF1007) 10 211 1.5E-63 T 29-03-2018 IPR010412 Protein of unknown function DUF1007 CKQ55_RS20095 e6ed70f2b798d7ef101d4305ca64c60f 212 PIRSF PIRSF008159 1 212 3.2E-70 T 29-03-2018 IPR016537 Uncharacterised conserved protein UCP008159, CKQ55_RS20195 4003a4440ad9b701de15f11f71abe5c5 388 Pfam PF04055 Radical SAM superfamily 124 295 2.4E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS20195 4003a4440ad9b701de15f11f71abe5c5 388 Gene3D G3DSA:3.20.20.70 30 386 1.0E-38 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS20195 4003a4440ad9b701de15f11f71abe5c5 388 SUPERFAMILY SSF102114 120 338 7.32E-13 T 29-03-2018 CKQ55_RS20195 4003a4440ad9b701de15f11f71abe5c5 388 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 21 368 74.942 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS20195 4003a4440ad9b701de15f11f71abe5c5 388 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 18 373 1.4E-175 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS20195 4003a4440ad9b701de15f11f71abe5c5 388 PIRSF PIRSF006004 15 382 1.3E-146 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 Gene3D G3DSA:3.40.50.2300 61 177 1.7E-23 T 29-03-2018 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 Pfam PF13407 Periplasmic binding protein domain 67 275 3.0E-14 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 29-03-2018 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 53 8.2E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 SUPERFAMILY SSF53822 64 328 4.71E-30 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 Gene3D G3DSA:3.40.50.2300 178 316 2.5E-17 T 29-03-2018 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 Gene3D G3DSA:1.10.260.40 4 60 2.4E-14 T 29-03-2018 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 SUPERFAMILY SSF47413 4 61 2.18E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS22135 f7d01e78137b55cbd3fe7a854b025d05 333 SMART SM00354 3 76 1.8E-27 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11180 45c881efff9ee00795ecc0a9bf05fe67 305 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 2.1E-50 T 29-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 PIRSF PIRSF001495 1 481 5.1E-244 T 29-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 54.756 T 29-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 Gene3D G3DSA:3.20.20.240 1 416 3.5E-112 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 Pfam PF06368 Methylaspartate mutase E chain (MutE) 43 481 5.0E-216 T 29-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 Gene3D G3DSA:3.90.970.10 417 481 2.2E-27 T 29-03-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 3.9E-253 T 29-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS03635 fc43a59d031020cd845c44c54485fcf0 481 SUPERFAMILY SSF51703 1 481 1.14E-199 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 SUPERFAMILY SSF51338 363 437 2.45E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 SUPERFAMILY SSF51338 4 58 2.45E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 Gene3D G3DSA:2.30.40.10 2 70 1.8E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 Pfam PF01979 Amidohydrolase family 55 410 2.0E-48 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 SUPERFAMILY SSF51556 58 356 6.13E-57 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 Gene3D G3DSA:2.30.40.10 346 441 3.1E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 Gene3D G3DSA:3.20.20.140 71 345 5.6E-28 T 29-03-2018 CKQ55_RS24310 3b271d56d40c7b4688400ceab7375f93 445 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 4 440 4.1E-206 T 29-03-2018 IPR017700 Putative aminohydrolase SsnA CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 SUPERFAMILY SSF51246 319 390 2.67E-18 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 SUPERFAMILY SSF52440 3 112 4.89E-35 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 SUPERFAMILY SSF56059 113 314 4.24E-55 T 29-03-2018 CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 Pfam PF02222 ATP-grasp domain 123 295 9.6E-56 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 Gene3D G3DSA:3.30.470.20 198 391 1.4E-36 T 29-03-2018 CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 Gene3D G3DSA:3.30.1490.20 130 197 5.4E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.23 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 Gene3D G3DSA:3.40.50.20 8 129 1.7E-20 T 29-03-2018 CKQ55_RS23760 b18c565cb0a4b20c3a6756c5e190c82c 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 1.4E-188 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CKQ55_RS13910 c954209c0d7acc26f7bb0fb3f02c31d6 462 Gene3D G3DSA:3.40.640.10 102 347 1.1E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS13910 c954209c0d7acc26f7bb0fb3f02c31d6 462 Pfam PF12390 Selenocysteine synthase N terminal 11 48 7.1E-9 T 29-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CKQ55_RS13910 c954209c0d7acc26f7bb0fb3f02c31d6 462 Pfam PF03841 L-seryl-tRNA selenium transferase 83 450 6.9E-173 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CKQ55_RS13910 c954209c0d7acc26f7bb0fb3f02c31d6 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 250.775 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CKQ55_RS13910 c954209c0d7acc26f7bb0fb3f02c31d6 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 459 5.8E-184 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CKQ55_RS13910 c954209c0d7acc26f7bb0fb3f02c31d6 462 SUPERFAMILY SSF53383 74 460 1.09E-44 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 SUPERFAMILY SSF64288 55 229 1.73E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 SMART SM00345 8 67 1.6E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.8E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 Gene3D G3DSA:1.10.10.10 1 69 3.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 SMART SM00866 92 231 1.3E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 Pfam PF07702 UTRA domain 96 229 4.4E-29 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.5E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.5E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 Gene3D G3DSA:3.40.1410.10 89 231 2.1E-29 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS03070 839906bcdf984c233c5ab71b4db40af2 238 SUPERFAMILY SSF46785 4 70 1.78E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 SUPERFAMILY SSF55031 221 336 6.58E-27 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 PIRSF PIRSF001235 10 419 9.6E-135 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 24 407 3.9E-119 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 SUPERFAMILY SSF53187 6 231 4.19E-82 T 29-03-2018 CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 SUPERFAMILY SSF53187 344 416 4.19E-82 T 29-03-2018 CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 Gene3D G3DSA:3.40.630.10 8 251 2.2E-40 T 29-03-2018 CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 Pfam PF01546 Peptidase family M20/M25/M40 85 414 5.6E-30 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS01275 45a8f34bb66b2a702cdc40001b4e2697 420 Gene3D G3DSA:3.40.630.10 252 420 9.4E-20 T 29-03-2018 CKQ55_RS25705 3037ee86e1de26a18c7137a40424266f 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 8.9E-14 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS25705 3037ee86e1de26a18c7137a40424266f 201 Gene3D G3DSA:3.40.30.10 1 97 3.1E-20 T 29-03-2018 CKQ55_RS25705 3037ee86e1de26a18c7137a40424266f 201 SUPERFAMILY SSF47616 83 199 6.82E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS25705 3037ee86e1de26a18c7137a40424266f 201 Gene3D G3DSA:1.20.1050.10 98 200 1.9E-24 T 29-03-2018 CKQ55_RS25705 3037ee86e1de26a18c7137a40424266f 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 9 74 9.2E-11 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS25705 3037ee86e1de26a18c7137a40424266f 201 SUPERFAMILY SSF52833 1 79 2.2E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS14655 d609d382772318bd43ef8744207a92c6 117 Pfam PF07977 FabA-like domain 22 90 1.3E-5 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS14655 d609d382772318bd43ef8744207a92c6 117 SUPERFAMILY SSF54637 10 92 4.05E-15 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS14655 d609d382772318bd43ef8744207a92c6 117 PIRSF PIRSF030962 1 117 1.2E-53 T 29-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS14655 d609d382772318bd43ef8744207a92c6 117 Gene3D G3DSA:3.10.129.10 5 117 9.9E-21 T 29-03-2018 CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF51206 8 136 1.03E-35 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 SMART SM00100 2 122 1.1E-26 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:2.60.120.10 4 144 6.0E-34 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15155 c9b73d94c2816acb50d358a803904515 210 SMART SM00419 160 208 4.5E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 Gene3D G3DSA:3.30.70.100 179 273 3.7E-27 T 29-03-2018 CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 Pfam PF05552 Conserved TM helix 16 64 7.3E-9 T 29-03-2018 IPR008910 Conserved TM helix CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 Gene3D G3DSA:2.30.30.60 129 178 2.2E-15 T 29-03-2018 CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 SUPERFAMILY SSF82861 27 112 3.53E-17 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 SUPERFAMILY SSF50182 114 179 7.19E-16 T 29-03-2018 IPR010920 LSM domain CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 SUPERFAMILY SSF82689 180 277 4.97E-29 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CKQ55_RS12450 b805594968f3825322bccfeb0099f936 285 Pfam PF00924 Mechanosensitive ion channel 72 268 3.0E-54 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CKQ55_RS29995 c6083ffc47c470dc521f01dfbbd13b2a 87 Pfam PF10749 Protein of unknown function (DUF2534) 5 84 1.1E-36 T 29-03-2018 IPR019685 Protein of unknown function DUF2534 CKQ55_RS20680 52ece14dfa416d159564080e1514d37d 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 27 272 2.2E-105 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CKQ55_RS20680 52ece14dfa416d159564080e1514d37d 277 Gene3D G3DSA:3.40.50.1580 11 276 5.9E-57 T 29-03-2018 CKQ55_RS20680 52ece14dfa416d159564080e1514d37d 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 27 274 4.5E-155 T 29-03-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CKQ55_RS20680 52ece14dfa416d159564080e1514d37d 277 PIRSF PIRSF000477 2 276 1.4E-112 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CKQ55_RS20680 52ece14dfa416d159564080e1514d37d 277 Pfam PF01048 Phosphorylase superfamily 28 273 3.8E-42 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS20680 52ece14dfa416d159564080e1514d37d 277 SUPERFAMILY SSF53167 10 276 7.65E-84 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.777 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.8E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 6.1E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.6E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 SUPERFAMILY SSF51161 32 316 8.37E-87 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Gene3D G3DSA:2.160.10.10 23 145 5.7E-19 T 29-03-2018 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.1E-22 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Gene3D G3DSA:2.160.10.10 206 341 7.5E-22 T 29-03-2018 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 3.5E-129 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CKQ55_RS07560 281ce46bae4e3dc51cc54f25631aaabd 341 Gene3D G3DSA:2.160.10.10 146 205 4.0E-15 T 29-03-2018 CKQ55_RS31200 88cd43aec881be25d3566539063535dd 748 SUPERFAMILY SSF52540 182 572 1.15E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31200 88cd43aec881be25d3566539063535dd 748 SUPERFAMILY SSF81995 619 665 1.8E-5 T 29-03-2018 CKQ55_RS31200 88cd43aec881be25d3566539063535dd 748 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 2.9E-121 T 29-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CKQ55_RS31200 88cd43aec881be25d3566539063535dd 748 Gene3D G3DSA:3.40.50.300 129 574 2.8E-38 T 29-03-2018 CKQ55_RS31200 88cd43aec881be25d3566539063535dd 748 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 576 9.9E-241 T 29-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 CKQ55_RS31200 88cd43aec881be25d3566539063535dd 748 Pfam PF12615 F sex factor protein N terminal 31 128 1.2E-19 T 29-03-2018 IPR022585 TraD coupling protein, N-terminal CKQ55_RS28330 7b14c6802531f4b4b23faf9ee6b7a27f 165 Gene3D G3DSA:3.30.300.130 10 106 1.2E-17 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS28330 7b14c6802531f4b4b23faf9ee6b7a27f 165 Pfam PF01883 Iron-sulfur cluster assembly protein 14 74 2.4E-8 T 29-03-2018 IPR002744 MIP18 family-like CKQ55_RS28330 7b14c6802531f4b4b23faf9ee6b7a27f 165 SUPERFAMILY SSF117916 13 105 2.35E-21 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS28330 7b14c6802531f4b4b23faf9ee6b7a27f 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 22 165 9.1E-67 T 29-03-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 38 438 2.5E-144 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 Gene3D G3DSA:1.20.1250.20 235 444 2.1E-27 T 29-03-2018 CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 Gene3D G3DSA:1.20.1250.20 22 222 6.1E-38 T 29-03-2018 CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 420 2.4E-128 T 29-03-2018 CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 PIRSF PIRSF002808 11 444 2.0E-34 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 SUPERFAMILY SSF103473 22 441 1.7E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13125 45b64e6c018d3a6ebd41fd0d03dcdfa8 445 Pfam PF07690 Major Facilitator Superfamily 36 404 2.8E-58 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 Gene3D G3DSA:3.10.20.30 1 106 4.2E-32 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 Gene3D G3DSA:1.10.1060.10 107 238 6.4E-30 T 29-03-2018 CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.2E-10 T 29-03-2018 CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.5E-92 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 SUPERFAMILY SSF46548 107 236 5.58E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 2.6E-31 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS03735 dc52caa963e1b9ca7c889a613ea705b5 238 SUPERFAMILY SSF54292 1 106 6.69E-30 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 SUPERFAMILY SSF117457 361 536 5.23E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 73 325 1.8E-31 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 Gene3D G3DSA:3.20.130.10 359 536 2.5E-67 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 PIRSF PIRSF001394 30 551 1.1E-231 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 1.2E-62 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 Pfam PF05683 Fumarase C-terminus 332 537 2.6E-92 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS26000 7282ca2ef2852e1d488674e274af5169 551 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 3.9E-86 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 SUPERFAMILY SSF46894 136 198 1.5E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.4E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.4E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.4E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 SMART SM00421 139 196 8.8E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 SUPERFAMILY SSF52172 2 121 9.39E-6 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 Gene3D G3DSA:3.40.50.2300 1 121 5.9E-7 T 29-03-2018 CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 Gene3D G3DSA:1.10.10.10 132 200 2.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14345 2f5b34a19c2025be09638a3891761d01 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 5.8E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS10675 05fc8e6fbedf637633bb3eaa12c10e9f 851 SUPERFAMILY SSF141729 67 181 4.32E-25 T 29-03-2018 CKQ55_RS10675 05fc8e6fbedf637633bb3eaa12c10e9f 851 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 314 324 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS10675 05fc8e6fbedf637633bb3eaa12c10e9f 851 Pfam PF13954 PapC N-terminal domain 40 189 4.3E-35 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS10675 05fc8e6fbedf637633bb3eaa12c10e9f 851 Pfam PF13953 PapC C-terminal domain 769 833 5.7E-19 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS10675 05fc8e6fbedf637633bb3eaa12c10e9f 851 Pfam PF00577 Outer membrane usher protein 203 758 1.4E-185 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 SUPERFAMILY SSF47819 296 372 7.85E-23 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 Gene3D G3DSA:1.10.150.80 195 293 1.2E-21 T 29-03-2018 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 SUPERFAMILY SSF47819 194 301 3.18E-30 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 SMART SM00341 210 289 1.7E-20 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 Gene3D G3DSA:3.30.420.10 1 194 7.7E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 SUPERFAMILY SSF53098 2 210 1.08E-65 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 Pfam PF00570 HRDC domain 213 278 3.1E-14 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 SMART SM00474 3 171 1.2E-47 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.066 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 Pfam PF01612 3'-5' exonuclease 3 169 1.9E-41 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CKQ55_RS24060 fb9dd18c2ea982f5a75634401697b1db 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 1.8E-149 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 PRINTS PR00625 DnaJ domain signature 25 40 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 PRINTS PR00625 DnaJ domain signature 42 62 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 PRINTS PR00625 DnaJ domain signature 62 81 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 PRINTS PR00625 DnaJ domain signature 7 25 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 6.1E-142 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Gene3D G3DSA:1.10.287.110 1 117 1.0E-37 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 SMART SM00271 4 62 2.7E-31 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Pfam PF00226 DnaJ domain 5 67 1.0E-28 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 SUPERFAMILY SSF57938 133 210 1.16E-23 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 SUPERFAMILY SSF49493 212 258 4.58E-20 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 SUPERFAMILY SSF49493 113 168 4.58E-20 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Gene3D G3DSA:2.60.260.20 203 253 6.1E-12 T 29-03-2018 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Gene3D G3DSA:2.60.260.20 254 364 5.0E-26 T 29-03-2018 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Pfam PF01556 DnaJ C terminal domain 120 332 6.7E-46 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Gene3D G3DSA:2.10.230.10 143 202 5.6E-21 T 29-03-2018 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Pfam PF00684 DnaJ central domain 146 206 1.2E-15 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.721 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 SUPERFAMILY SSF46565 1 108 2.22E-36 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08610 a6a5aec0c5b17e03ae7abacc257dd927 378 SUPERFAMILY SSF49493 258 343 5.49E-21 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.7E-19 T 29-03-2018 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 Gene3D G3DSA:1.25.40.10 197 284 1.0E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 Gene3D G3DSA:3.40.30.10 1 124 7.8E-29 T 29-03-2018 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 SUPERFAMILY SSF48452 119 243 4.96E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 Pfam PF00085 Thioredoxin 6 108 2.0E-19 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 SUPERFAMILY SSF52833 2 112 1.73E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 Gene3D G3DSA:1.25.40.10 125 196 7.7E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS05790 b3a0db5af240d9761c2895e3f4497681 284 Pfam PF14561 Tetratricopeptide repeat 196 284 2.2E-28 T 29-03-2018 CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 SUPERFAMILY SSF53335 3 374 3.85E-54 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 78.939 T 29-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 Gene3D G3DSA:3.40.50.150 1 373 2.9E-46 T 29-03-2018 CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 6.5E-16 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CKQ55_RS02385 af228c149a2ec01a7757873624b7d3a0 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 2.1E-207 T 29-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Gene3D G3DSA:3.30.70.20 66 95 8.6E-12 T 29-03-2018 CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Gene3D G3DSA:3.30.70.20 19 65 3.8E-11 T 29-03-2018 CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 SUPERFAMILY SSF54862 1 158 1.88E-41 T 29-03-2018 CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Pfam PF12800 4Fe-4S binding domain 10 22 0.24 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Gene3D G3DSA:3.30.70.20 96 124 1.0E-12 T 29-03-2018 CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Gene3D G3DSA:3.30.70.20 125 159 0.2 T 29-03-2018 CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Pfam PF13247 4Fe-4S dicluster domain 55 140 1.8E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS13980 402e2229d005f62101031f67c828f230 162 Gene3D G3DSA:3.30.70.20 1 18 0.017 T 29-03-2018 CKQ55_RS15955 4a8e881786dfd9e2532f40c4bc923006 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 7.6E-104 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CKQ55_RS15955 4a8e881786dfd9e2532f40c4bc923006 260 Pfam PF02405 Permease MlaE 44 256 6.0E-72 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 29-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.369 T 29-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 SUPERFAMILY SSF51621 6 883 0.0 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 Gene3D G3DSA:3.20.20.60 378 594 1.6E-5 T 29-03-2018 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 Gene3D G3DSA:1.20.1440.90 274 377 4.3E-26 T 29-03-2018 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 29-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 3.6E-294 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS12215 b8177bd3498c009eebe26675b2e21661 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 5.5E-69 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 87.569 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 Gene3D G3DSA:3.90.78.10 221 334 5.4E-41 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 SUPERFAMILY SSF56176 3 197 7.63E-45 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 9.4E-116 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 Pfam PF01565 FAD binding domain 18 143 5.2E-22 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 Gene3D G3DSA:3.30.465.10 69 218 5.7E-48 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 Gene3D G3DSA:3.30.43.10 3 68 7.2E-19 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 329 3.4E-33 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS11630 9628517d758523c05f4113e2ce0ca8a6 342 SUPERFAMILY SSF56194 202 340 1.44E-52 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 Gene3D G3DSA:3.30.565.10 320 478 3.1E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 SMART SM00387 360 472 5.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 SUPERFAMILY SSF47384 236 317 1.57E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 SMART SM00388 249 317 2.6E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 316 1.8E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 470 5.0E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 SUPERFAMILY SSF55874 321 470 2.26E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 Gene3D G3DSA:1.10.287.130 239 313 6.7E-14 T 29-03-2018 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 1.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 1.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS20020 3be2f990ac6c82b85e09fe7453bee103 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 1.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22990 b716dad77a7eea4dd619931fcefa7282 441 Pfam PF00083 Sugar (and other) transporter 28 417 1.0E-22 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS22990 b716dad77a7eea4dd619931fcefa7282 441 SUPERFAMILY SSF103473 19 439 1.26E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS22990 b716dad77a7eea4dd619931fcefa7282 441 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 427 1.5E-149 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CKQ55_RS22990 b716dad77a7eea4dd619931fcefa7282 441 Gene3D G3DSA:1.20.1250.20 246 441 1.3E-21 T 29-03-2018 CKQ55_RS22990 b716dad77a7eea4dd619931fcefa7282 441 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS22990 b716dad77a7eea4dd619931fcefa7282 441 Gene3D G3DSA:1.20.1250.20 12 234 1.2E-22 T 29-03-2018 CKQ55_RS21040 4ccae5de7d5cb4617bb7c46229595afe 147 SUPERFAMILY SSF55804 1 144 4.97E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS21040 4ccae5de7d5cb4617bb7c46229595afe 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 144 3.8E-34 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS21040 4ccae5de7d5cb4617bb7c46229595afe 147 Gene3D G3DSA:3.40.930.10 1 147 4.6E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS19465 26f66680f495e875c37f280b7c4e41ba 844 Pfam PF00577 Outer membrane usher protein 203 746 1.8E-186 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS19465 26f66680f495e875c37f280b7c4e41ba 844 Pfam PF13954 PapC N-terminal domain 43 188 1.4E-44 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS19465 26f66680f495e875c37f280b7c4e41ba 844 SUPERFAMILY SSF141729 68 180 2.75E-32 T 29-03-2018 CKQ55_RS19465 26f66680f495e875c37f280b7c4e41ba 844 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS19465 26f66680f495e875c37f280b7c4e41ba 844 Pfam PF13953 PapC C-terminal domain 756 826 4.8E-16 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS28225 f1ff460510e9b5cd80e319c90371b905 479 Gene3D G3DSA:3.40.605.10 1 266 7.0E-93 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28225 f1ff460510e9b5cd80e319c90371b905 479 Pfam PF00171 Aldehyde dehydrogenase family 22 475 7.0E-165 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28225 f1ff460510e9b5cd80e319c90371b905 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28225 f1ff460510e9b5cd80e319c90371b905 479 SUPERFAMILY SSF53720 4 477 1.96E-159 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28225 f1ff460510e9b5cd80e319c90371b905 479 Gene3D G3DSA:3.40.309.10 267 444 3.3E-67 T 29-03-2018 CKQ55_RS28225 f1ff460510e9b5cd80e319c90371b905 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 245 1.2E-39 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 Gene3D G3DSA:3.40.47.10 259 403 1.3E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 SUPERFAMILY SSF53901 214 403 8.06E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 SUPERFAMILY SSF53901 1 252 1.61E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 Gene3D G3DSA:3.40.47.10 4 258 1.6E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 SMART SM00825 Beta-ketoacyl synthase 4 405 1.5E-12 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CKQ55_RS20900 fe3269d53306e85a054567b9055d73c2 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 2.1E-29 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 Pfam PF01047 MarR family 38 96 1.3E-18 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 2.6E-22 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.6E-22 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.6E-22 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.6E-22 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 Gene3D G3DSA:1.10.10.10 7 144 1.7E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 SUPERFAMILY SSF46785 5 143 2.48E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26440 e6292a94d8150e8906d75a7757824926 144 SMART SM00347 31 132 1.6E-31 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS04690 f2b9b03156b0c18f36fb645758cae827 297 Gene3D G3DSA:1.10.3720.10 17 288 4.7E-33 T 29-03-2018 CKQ55_RS04690 f2b9b03156b0c18f36fb645758cae827 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 290 1.2E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04690 f2b9b03156b0c18f36fb645758cae827 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 63 1.9E-8 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS04690 f2b9b03156b0c18f36fb645758cae827 297 SUPERFAMILY SSF161098 92 279 7.06E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 SMART SM00478 130 276 1.1E-22 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 Gene3D G3DSA:1.10.340.30 101 239 2.9E-24 T 29-03-2018 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 Gene3D G3DSA:1.10.1670.10 240 279 5.4E-11 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 Gene3D G3DSA:3.30.310.20 1 100 1.2E-29 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 SUPERFAMILY SSF48150 102 274 4.36E-45 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 Pfam PF06029 AlkA N-terminal domain 4 112 4.1E-29 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 241 1.9E-8 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 SMART SM01009 1 112 1.6E-41 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 SUPERFAMILY SSF55945 3 97 7.22E-26 T 29-03-2018 CKQ55_RS22550 cc05ed048d3fd1bcd5899fb78e63f9be 282 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 29-03-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 Pfam PF00202 Aminotransferase class-III 27 420 6.9E-130 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 5.0E-183 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 PIRSF PIRSF000521 29 423 2.0E-27 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 Gene3D G3DSA:3.90.1150.10 2 177 2.2E-47 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 50.811 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 Gene3D G3DSA:3.90.1150.10 253 425 8.5E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS03355 498ff505f579842051745bda7bed1d2e 429 SUPERFAMILY SSF53383 1 423 3.21E-137 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS27380 a0a96ac782d2f2a773530ff446501908 380 Pfam PF03583 Secretory lipase 114 200 3.4E-14 T 29-03-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CKQ55_RS27380 a0a96ac782d2f2a773530ff446501908 380 SUPERFAMILY SSF53474 71 267 1.76E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27380 a0a96ac782d2f2a773530ff446501908 380 SUPERFAMILY SSF53474 308 374 1.76E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27380 a0a96ac782d2f2a773530ff446501908 380 PIRSF PIRSF029171 18 380 2.8E-101 T 29-03-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CKQ55_RS27380 a0a96ac782d2f2a773530ff446501908 380 Pfam PF01738 Dienelactone hydrolase family 310 358 3.0E-4 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CKQ55_RS27380 a0a96ac782d2f2a773530ff446501908 380 Gene3D G3DSA:3.40.50.1820 12 380 3.0E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 SMART SM00420 6 58 1.8E-24 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 SUPERFAMILY SSF100950 76 234 8.27E-30 T 29-03-2018 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 Gene3D G3DSA:3.40.50.1360 74 234 6.7E-35 T 29-03-2018 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.8E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 SUPERFAMILY SSF46785 4 70 5.71E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 SMART SM01134 74 234 5.1E-57 T 29-03-2018 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 5.9E-47 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS29830 b2b255f9f36ecaed7248ac7809be091f 252 Gene3D G3DSA:1.10.10.10 4 73 1.5E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22885 4dcdfac6c68cfe8ac1160980214baaf7 103 Pfam PF12840 Helix-turn-helix domain 16 73 3.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22885 4dcdfac6c68cfe8ac1160980214baaf7 103 Gene3D G3DSA:1.10.10.10 2 101 5.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22885 4dcdfac6c68cfe8ac1160980214baaf7 103 SUPERFAMILY SSF46785 3 93 7.03E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22885 4dcdfac6c68cfe8ac1160980214baaf7 103 SMART SM00418 16 93 2.7E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS28305 8de0374237007298dd09ab21f7c8099e 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 130 8.0E-35 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CKQ55_RS28305 8de0374237007298dd09ab21f7c8099e 140 Gene3D G3DSA:3.10.129.10 1 129 2.1E-30 T 29-03-2018 CKQ55_RS28305 8de0374237007298dd09ab21f7c8099e 140 SUPERFAMILY SSF54637 5 131 5.08E-32 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS28305 8de0374237007298dd09ab21f7c8099e 140 Pfam PF03061 Thioesterase superfamily 49 123 1.9E-20 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CKQ55_RS28305 8de0374237007298dd09ab21f7c8099e 140 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 19 132 8.4E-49 T 29-03-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SMART SM00316 620 690 3.6E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF50249 608 692 1.28E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 5.6E-25 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.503 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Pfam PF00575 S1 RNA binding domain 619 690 2.8E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SMART SM00322 552 617 8.1E-13 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Gene3D G3DSA:3.30.1370.10 554 616 6.5E-14 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Gene3D G3DSA:1.10.10.400 249 316 3.3E-19 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Gene3D G3DSA:3.30.230.70 13 248 3.0E-53 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 3.6E-18 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.1E-21 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF55666 450 548 9.12E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF54211 301 492 4.71E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF55666 145 236 1.01E-30 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.0E-14 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF46915 239 320 4.97E-18 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Gene3D G3DSA:3.30.230.70 317 544 1.9E-56 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF54791 554 622 2.09E-17 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 SUPERFAMILY SSF54211 4 144 5.06E-50 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 PIRSF PIRSF005499 2 712 1.9E-300 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Pfam PF00013 KH domain 556 614 3.4E-9 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CKQ55_RS16110 e8639ebe2513a976196c96985f11e708 712 Gene3D G3DSA:2.40.50.140 617 698 1.6E-26 T 29-03-2018 CKQ55_RS27975 c7992882d8c66989d79bf01b1ef1c472 532 Gene3D G3DSA:3.10.105.10 298 502 3.2E-63 T 29-03-2018 CKQ55_RS27975 c7992882d8c66989d79bf01b1ef1c472 532 Gene3D G3DSA:3.40.190.10 202 297 2.6E-24 T 29-03-2018 CKQ55_RS27975 c7992882d8c66989d79bf01b1ef1c472 532 PIRSF PIRSF002741 3 531 7.7E-107 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS27975 c7992882d8c66989d79bf01b1ef1c472 532 Gene3D G3DSA:3.90.76.10 36 201 2.9E-33 T 29-03-2018 CKQ55_RS27975 c7992882d8c66989d79bf01b1ef1c472 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 451 2.2E-93 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS27975 c7992882d8c66989d79bf01b1ef1c472 532 SUPERFAMILY SSF53850 27 523 5.97E-147 T 29-03-2018 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 Gene3D G3DSA:1.20.5.1030 68 119 1.6E-18 T 29-03-2018 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CKQ55_RS11585 92330c627fd4a4485e68437be589a070 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 445 3.0E-114 T 29-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 Gene3D G3DSA:3.40.50.980 145 280 2.0E-25 T 29-03-2018 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 Gene3D G3DSA:3.40.50.980 2 144 3.0E-22 T 29-03-2018 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 435 6.4E-6 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 SUPERFAMILY SSF56801 8 452 5.49E-98 T 29-03-2018 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 Pfam PF00501 AMP-binding enzyme 17 355 1.2E-50 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 Gene3D G3DSA:2.30.38.10 281 350 1.7E-11 T 29-03-2018 CKQ55_RS21250 fc827cbe5c350b7d9e7db8e3f77aa247 463 Gene3D G3DSA:3.30.300.30 351 455 3.1E-19 T 29-03-2018 CKQ55_RS15170 fa8e55aa84d0b41f8014f5f2914f08c3 134 Gene3D G3DSA:3.30.300.20 35 133 3.7E-20 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS15170 fa8e55aa84d0b41f8014f5f2914f08c3 134 Gene3D G3DSA:2.20.25.10 1 29 8.2E-15 T 29-03-2018 CKQ55_RS15170 fa8e55aa84d0b41f8014f5f2914f08c3 134 SUPERFAMILY SSF82784 1 133 3.4E-43 T 29-03-2018 IPR003718 OsmC/Ohr family CKQ55_RS15170 fa8e55aa84d0b41f8014f5f2914f08c3 134 Pfam PF02566 OsmC-like protein 30 127 1.3E-19 T 29-03-2018 IPR003718 OsmC/Ohr family CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 277 303 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 207 235 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 339 359 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 308 327 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 253 274 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.2E-64 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 Pfam PF01306 LacY proton/sugar symporter 5 397 2.1E-123 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 392 4.8E-123 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 Gene3D G3DSA:1.20.1250.20 4 201 4.0E-22 T 29-03-2018 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 Gene3D G3DSA:1.20.1250.20 202 401 2.6E-22 T 29-03-2018 CKQ55_RS02970 e41451b1c166b9bdcf82adfaed1e6709 413 SUPERFAMILY SSF103473 5 398 8.37E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.192 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 SUPERFAMILY SSF53732 2 465 1.57E-168 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 Gene3D G3DSA:3.40.1060.10 153 288 2.4E-43 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.8E-160 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 Gene3D G3DSA:3.30.499.10 1 152 3.1E-40 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 286 300 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 82 95 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 119 132 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 195 208 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 343 354 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 399 412 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 209 222 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 133 148 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 PRINTS PR00415 Aconitase family signature 108 116 3.5E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 8.6E-276 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CKQ55_RS08225 7e57e866872cc57d1ee797ebd9e8d003 466 Gene3D G3DSA:3.30.499.10 305 466 1.1E-52 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 Pfam PF13377 Periplasmic binding protein-like domain 173 331 2.4E-32 T 29-03-2018 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 Gene3D G3DSA:3.40.50.2300 58 180 8.5E-18 T 29-03-2018 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 SMART SM00354 5 75 5.0E-30 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 Gene3D G3DSA:3.40.50.2300 181 335 3.0E-38 T 29-03-2018 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 6.6E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 6.6E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 SUPERFAMILY SSF47413 6 60 1.66E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 SUPERFAMILY SSF53822 65 325 1.41E-48 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 1.2E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS26320 cc5508a680c2ee97f4e1b11ebc23a5d4 356 Gene3D G3DSA:1.10.260.40 5 57 2.4E-20 T 29-03-2018 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 SMART SM01240 7 344 1.0E-140 T 29-03-2018 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 SUPERFAMILY SSF51412 6 336 1.83E-100 T 29-03-2018 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 Gene3D G3DSA:3.20.20.70 8 341 5.4E-84 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 5.9E-207 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 PIRSF PIRSF000235 1 347 3.3E-198 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 7.6E-82 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CKQ55_RS08070 4608478f4cfcf868dcc3753981debfdb 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 56.041 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CKQ55_RS00900 7bee7324bfd201deb3ac751e8e18f90c 354 Pfam PF12368 Rhodanase C-terminal 246 307 1.8E-19 T 29-03-2018 IPR022111 Rhodanase, C-terminal CKQ55_RS00900 7bee7324bfd201deb3ac751e8e18f90c 354 SUPERFAMILY SSF52821 116 259 4.45E-31 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS00900 7bee7324bfd201deb3ac751e8e18f90c 354 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.75 T 29-03-2018 IPR020936 Uncharacterised protein family UPF0176 CKQ55_RS00900 7bee7324bfd201deb3ac751e8e18f90c 354 SMART SM00450 136 237 1.7E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS00900 7bee7324bfd201deb3ac751e8e18f90c 354 Pfam PF00581 Rhodanese-like domain 138 232 2.7E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS00900 7bee7324bfd201deb3ac751e8e18f90c 354 Gene3D G3DSA:3.40.250.10 130 243 2.8E-28 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS22200 718d72ead8c23a54d8fa0ed4ea8427a4 156 Pfam PF15941 FidL-like putative membrane protein 84 154 2.4E-6 T 29-03-2018 IPR031854 Putative membrane protein FidL-like CKQ55_RS15655 589aadddbab2ab9f9bcf4ae6c931d877 328 Pfam PF04085 rod shape-determining protein MreC 123 269 1.0E-36 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CKQ55_RS15655 589aadddbab2ab9f9bcf4ae6c931d877 328 PIRSF PIRSF038471 2 284 3.5E-75 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CKQ55_RS15655 589aadddbab2ab9f9bcf4ae6c931d877 328 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 1.2E-125 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 4.5E-215 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 SUPERFAMILY SSF47323 454 577 7.85E-35 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.372 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Gene3D G3DSA:3.40.50.620 107 440 3.8E-61 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 SUPERFAMILY SSF55190 2 97 2.62E-23 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Gene3D G3DSA:3.30.1360.70 1 106 1.5E-29 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 SMART SM01016 5 87 1.6E-29 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 SUPERFAMILY SSF52374 111 454 4.93E-98 T 29-03-2018 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 6.3E-22 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 7.4E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 7.4E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 7.4E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 7.4E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Pfam PF05746 DALR anticodon binding domain 460 577 2.8E-34 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Pfam PF00750 tRNA synthetases class I (R) 96 446 8.5E-175 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 SMART SM00836 460 577 3.2E-36 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CKQ55_RS23615 a0ad473463336ec06234a1b7bb1fe9d4 577 Gene3D G3DSA:1.10.730.10 441 577 1.4E-44 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS15815 f81ce51eb609a2a72c92fd90b1a9cd7b 212 Gene3D G3DSA:1.20.1050.10 89 209 2.8E-18 T 29-03-2018 CKQ55_RS15815 f81ce51eb609a2a72c92fd90b1a9cd7b 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.1E-12 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS15815 f81ce51eb609a2a72c92fd90b1a9cd7b 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.6E-20 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS15815 f81ce51eb609a2a72c92fd90b1a9cd7b 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS15815 f81ce51eb609a2a72c92fd90b1a9cd7b 212 Gene3D G3DSA:3.40.30.10 1 88 2.7E-24 T 29-03-2018 CKQ55_RS15815 f81ce51eb609a2a72c92fd90b1a9cd7b 212 SUPERFAMILY SSF47616 82 208 4.12E-28 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS19765 edc898695f63f2c57951cb660608b9bb 160 SUPERFAMILY SSF103088 44 157 1.57E-30 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS19765 edc898695f63f2c57951cb660608b9bb 160 PRINTS PR01021 OMPA domain signature 56 78 1.2E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS19765 edc898695f63f2c57951cb660608b9bb 160 PRINTS PR01021 OMPA domain signature 101 117 1.2E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS19765 edc898695f63f2c57951cb660608b9bb 160 PRINTS PR01021 OMPA domain signature 86 101 1.2E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS19765 edc898695f63f2c57951cb660608b9bb 160 Pfam PF00691 OmpA family 55 151 7.6E-19 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS19765 edc898695f63f2c57951cb660608b9bb 160 Gene3D G3DSA:3.30.1330.60 21 160 6.6E-32 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS21915 97d3a56df6ab9f09de6928eb3771bc0e 305 Gene3D G3DSA:3.40.190.10 186 302 2.7E-18 T 29-03-2018 CKQ55_RS21915 97d3a56df6ab9f09de6928eb3771bc0e 305 SUPERFAMILY SSF53850 25 304 1.9E-60 T 29-03-2018 CKQ55_RS21915 97d3a56df6ab9f09de6928eb3771bc0e 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 1.4E-60 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CKQ55_RS21915 97d3a56df6ab9f09de6928eb3771bc0e 305 Gene3D G3DSA:3.40.190.10 18 185 2.6E-26 T 29-03-2018 CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 Gene3D G3DSA:1.10.10.10 1 71 2.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 Gene3D G3DSA:1.20.120.530 156 304 2.9E-16 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 SUPERFAMILY SSF46785 3 63 7.03E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.1E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.1E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 SMART SM00895 159 287 1.2E-10 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 SUPERFAMILY SSF48008 158 294 1.18E-12 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 Pfam PF07729 FCD domain 159 286 1.2E-9 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 Gene3D G3DSA:1.10.10.10 83 155 6.8E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 62 5.8E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS08990 105f1d05790058a35fe31f05321da57f 304 SUPERFAMILY SSF46785 93 147 2.17E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07850 573c2b24aa177b4b9688d084e47676ef 284 Gene3D G3DSA:3.40.50.620 1 176 7.5E-76 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS07850 573c2b24aa177b4b9688d084e47676ef 284 Gene3D G3DSA:3.30.1300.10 180 283 1.2E-29 T 29-03-2018 CKQ55_RS07850 573c2b24aa177b4b9688d084e47676ef 284 SUPERFAMILY SSF52374 3 280 4.76E-104 T 29-03-2018 CKQ55_RS07850 573c2b24aa177b4b9688d084e47676ef 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 8.6E-102 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CKQ55_RS07850 573c2b24aa177b4b9688d084e47676ef 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 280 1.7E-121 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CKQ55_RS07850 573c2b24aa177b4b9688d084e47676ef 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.61 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CKQ55_RS15115 e1a82a06fa475555131b9ce8f31eaa3c 440 SUPERFAMILY SSF51556 57 376 1.28E-106 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS15115 e1a82a06fa475555131b9ce8f31eaa3c 440 Pfam PF07969 Amidohydrolase family 45 405 6.6E-55 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS15115 e1a82a06fa475555131b9ce8f31eaa3c 440 Gene3D G3DSA:2.30.40.10 3 65 6.2E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS15115 e1a82a06fa475555131b9ce8f31eaa3c 440 Gene3D G3DSA:3.20.20.140 66 365 1.5E-47 T 29-03-2018 CKQ55_RS15115 e1a82a06fa475555131b9ce8f31eaa3c 440 SUPERFAMILY SSF51338 8 78 3.97E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 126 239 7.0E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-38 T 29-03-2018 CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS14395 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 336 1.8E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 SMART SM00387 382 490 1.2E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 489 2.6E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 SUPERFAMILY SSF55874 326 490 1.83E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 Gene3D G3DSA:3.30.450.20 33 172 7.3E-8 T 29-03-2018 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 SMART SM00388 268 336 2.3E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 Gene3D G3DSA:3.30.565.10 331 490 1.5E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 5.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 5.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 5.9E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 SUPERFAMILY SSF47384 251 337 1.39E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS02375 7762bdc2b867bd2b5c18986562402adc 490 Gene3D G3DSA:1.10.287.130 259 330 7.1E-16 T 29-03-2018 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 340 1128 0.0 T 29-03-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Hamap MF_02058 Choline trimethylamine-lyase [cutC]. 336 1128 57.553 T 29-03-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Pfam PF01228 Glycine radical 1006 1109 2.0E-25 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Gene3D G3DSA:3.20.70.20 104 321 9.2E-44 T 29-03-2018 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Gene3D G3DSA:3.20.70.20 6 92 1.9E-8 T 29-03-2018 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Gene3D G3DSA:3.20.70.20 340 1126 2.7E-267 T 29-03-2018 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 SUPERFAMILY SSF51998 6 309 1.74E-47 T 29-03-2018 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 ProSitePatterns PS00850 Glycine radical domain signature. 1098 1106 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 SUPERFAMILY SSF51998 340 1125 6.71E-241 T 29-03-2018 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Pfam PF02901 Pyruvate formate lyase-like 341 989 4.7E-219 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Pfam PF02901 Pyruvate formate lyase-like 106 310 1.6E-37 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CKQ55_RS09350 691c87a040a1fcabc97b5ec31e0ebaa8 1128 Pfam PF02901 Pyruvate formate lyase-like 7 83 1.6E-7 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 Gene3D G3DSA:3.40.50.2300 55 176 1.1E-31 T 29-03-2018 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 SUPERFAMILY SSF53822 60 338 3.34E-94 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 Gene3D G3DSA:1.10.260.40 2 54 9.4E-20 T 29-03-2018 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 SMART SM00354 1 71 3.0E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.3E-39 T 29-03-2018 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 Gene3D G3DSA:3.40.50.2300 177 308 1.9E-49 T 29-03-2018 CKQ55_RS25585 3eea4db6efb6b4cc3c28faa764c58b62 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS01210 3a57cba6170902386f013cef42e7f001 106 Gene3D G3DSA:3.40.50.2300 3 102 4.4E-41 T 29-03-2018 CKQ55_RS01210 3a57cba6170902386f013cef42e7f001 106 SUPERFAMILY SSF52794 3 100 1.38E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS01210 3a57cba6170902386f013cef42e7f001 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 7.5E-41 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CKQ55_RS01210 3a57cba6170902386f013cef42e7f001 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 1.2E-21 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 Pfam PF00920 Dehydratase family 34 607 3.7E-218 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 Gene3D G3DSA:3.40.50.2300 51 173 0.0059 T 29-03-2018 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 SUPERFAMILY SSF143975 3 420 7.85E-135 T 29-03-2018 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.191 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 SUPERFAMILY SSF52016 421 610 2.43E-59 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS12080 56e521a4bb26ea51b65f8fd8a6eba7b5 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 4.2E-271 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 Gene3D G3DSA:3.40.50.1860 1 117 1.8E-30 T 29-03-2018 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 SUPERFAMILY SSF53681 118 229 2.94E-31 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 2.5E-54 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 SUPERFAMILY SSF53681 1 116 8.5E-36 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 Gene3D G3DSA:3.40.50.1860 118 215 2.2E-22 T 29-03-2018 CKQ55_RS17970 00302d5a67d702f507aa27510b3d813e 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 3.0E-63 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CKQ55_RS06845 84cd6fa830bf9bbd055aa4b5e252196c 293 Gene3D G3DSA:1.10.3720.10 27 282 4.7E-19 T 29-03-2018 CKQ55_RS06845 84cd6fa830bf9bbd055aa4b5e252196c 293 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 30 281 1.9E-77 T 29-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CKQ55_RS06845 84cd6fa830bf9bbd055aa4b5e252196c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 280 3.4E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06845 84cd6fa830bf9bbd055aa4b5e252196c 293 SUPERFAMILY SSF161098 84 272 6.54E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS12845 a773630f4c6ec436c1482b4711f954f5 321 Gene3D G3DSA:1.10.3470.10 18 320 2.0E-39 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS12845 a773630f4c6ec436c1482b4711f954f5 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 5.6E-51 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS19190 b8a1b0f48843a198f6cf73a1a46856d9 119 PIRSF PIRSF011474 1 118 7.3E-45 T 29-03-2018 IPR009693 Glucitol operon activator CKQ55_RS19190 b8a1b0f48843a198f6cf73a1a46856d9 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 1.4E-37 T 29-03-2018 IPR009693 Glucitol operon activator CKQ55_RS23800 87399d8ba200117b406d0381ead7c0a1 113 Pfam PF10709 Protein of unknown function (DUF2511) 26 113 1.4E-44 T 29-03-2018 IPR019648 Protein of unknown function DUF2511 CKQ55_RS18995 0b34a8b4c839e4df4da18a2c40da0f7e 273 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS18995 0b34a8b4c839e4df4da18a2c40da0f7e 273 Gene3D G3DSA:3.40.50.300 2 242 5.1E-57 T 29-03-2018 CKQ55_RS18995 0b34a8b4c839e4df4da18a2c40da0f7e 273 SUPERFAMILY SSF52540 8 234 3.79E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18995 0b34a8b4c839e4df4da18a2c40da0f7e 273 SMART SM00382 33 249 1.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18995 0b34a8b4c839e4df4da18a2c40da0f7e 273 Pfam PF00005 ABC transporter 24 171 1.1E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27740 e874a57131c61bd488b0c36c284602ad 191 SUPERFAMILY SSF48498 80 176 1.8E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS27740 e874a57131c61bd488b0c36c284602ad 191 SUPERFAMILY SSF46689 4 70 1.37E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27740 e874a57131c61bd488b0c36c284602ad 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 6.0E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27740 e874a57131c61bd488b0c36c284602ad 191 Gene3D G3DSA:1.10.357.10 4 187 3.1E-26 T 29-03-2018 CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 9.4E-69 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 5.3E-166 T 29-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.3E-126 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 Gene3D G3DSA:3.40.50.1100 130 303 1.8E-45 T 29-03-2018 CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 SUPERFAMILY SSF53686 3 289 7.46E-93 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS20600 243243b993664bca037fcd38400f2d68 303 Gene3D G3DSA:3.40.50.1100 20 129 1.0E-34 T 29-03-2018 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 Gene3D G3DSA:3.40.710.10 30 290 3.8E-32 T 29-03-2018 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 Pfam PF13354 Beta-lactamase enzyme family 60 263 2.0E-36 T 29-03-2018 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 ProSitePatterns PS00146 Beta-lactamase class-A active site. 69 84 - T 29-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 SUPERFAMILY SSF56601 33 289 1.43E-78 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 224 239 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 109 134 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 171 196 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 207 222 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 145 169 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 67 84 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS05130 aa0aaf422c9d4165009f55b61fc2558a 291 PRINTS PR00118 Beta-lactamase class A signature 36 60 1.3E-73 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 Gene3D G3DSA:3.90.700.10 345 492 3.1E-31 T 29-03-2018 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 Pfam PF00890 FAD binding domain 8 544 4.1E-100 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 SUPERFAMILY SSF56425 322 496 1.53E-27 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 SUPERFAMILY SSF51905 87 140 7.67E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 SUPERFAMILY SSF51905 5 59 7.67E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 SUPERFAMILY SSF51905 184 312 7.67E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 SUPERFAMILY SSF51905 497 564 7.67E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06285 4bb3d9af6e7cd94f8dbcfcaba88297be 567 Gene3D G3DSA:3.50.50.60 2 285 1.4E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 Gene3D G3DSA:3.40.50.20 1 150 2.0E-44 T 29-03-2018 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 SUPERFAMILY SSF52440 3 139 2.49E-36 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 Gene3D G3DSA:3.30.1490.20 155 212 3.3E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 1.1E-82 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 SUPERFAMILY SSF56059 140 354 4.24E-62 T 29-03-2018 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 43.159 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 4.8E-119 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.2E-29 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 Gene3D G3DSA:3.30.470.20 213 360 3.0E-44 T 29-03-2018 CKQ55_RS06610 969d5037f0e8eb72a1e990b7b9a5492b 365 PIRSF PIRSF039102 1 359 9.3E-139 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 PIRSF PIRSF002161 1 179 7.3E-67 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 Gene3D G3DSA:3.30.1440.10 1 179 2.4E-81 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.4E-41 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 SUPERFAMILY SSF55282 4 179 1.58E-79 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15375 ba7a1e55251822a7a636d41257672d49 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.878 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS01515 ad2bce57a072a874849d315f398ca06f 290 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 16 287 8.1E-101 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CKQ55_RS01515 ad2bce57a072a874849d315f398ca06f 290 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 285 1.3E-81 T 29-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CKQ55_RS01515 ad2bce57a072a874849d315f398ca06f 290 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 290 156.975 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 5.5E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 Gene3D G3DSA:3.40.190.10 96 186 5.1E-11 T 29-03-2018 CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 Pfam PF03466 LysR substrate binding domain 95 304 1.3E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 Gene3D G3DSA:1.10.10.10 3 87 7.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 Gene3D G3DSA:3.40.190.10 187 272 7.2E-27 T 29-03-2018 CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 SUPERFAMILY SSF46785 9 118 2.21E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22980 b34badb9fe9fa95be384513af2aa72ad 305 SUPERFAMILY SSF53850 96 304 1.99E-40 T 29-03-2018 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 SUPERFAMILY SSF55120 61 227 9.18E-48 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 Gene3D G3DSA:3.10.290.10 1 62 5.6E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 4.9E-59 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 Gene3D G3DSA:3.30.2350.10 63 234 3.3E-38 T 29-03-2018 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 SMART SM00363 1 60 6.5E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 Pfam PF01479 S4 domain 1 45 2.0E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 SUPERFAMILY SSF55174 1 85 2.06E-12 T 29-03-2018 CKQ55_RS21620 c7bb111d3f130b5f0a7cf48b3bc7dd82 239 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.0E-18 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS04130 3e4571d606e1c82313f6325cb4aeadda 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.343 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CKQ55_RS04130 3e4571d606e1c82313f6325cb4aeadda 105 Gene3D G3DSA:3.30.460.10 1 105 3.0E-35 T 29-03-2018 CKQ55_RS04130 3e4571d606e1c82313f6325cb4aeadda 105 SUPERFAMILY SSF81301 4 105 2.94E-37 T 29-03-2018 CKQ55_RS04130 3e4571d606e1c82313f6325cb4aeadda 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 8.1E-38 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CKQ55_RS04130 3e4571d606e1c82313f6325cb4aeadda 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.3E-28 T 29-03-2018 CKQ55_RS12615 e8a0f68a9d5daed5ef3130ac11f0c86a 160 Pfam PF03610 PTS system fructose IIA component 6 115 2.3E-13 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS12615 e8a0f68a9d5daed5ef3130ac11f0c86a 160 Gene3D G3DSA:3.40.50.510 1 145 7.5E-27 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS12615 e8a0f68a9d5daed5ef3130ac11f0c86a 160 SUPERFAMILY SSF53062 1 132 4.32E-25 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS02310 e8966477e5ff11e10f5ccf5b7f7f8b48 144 Pfam PF07681 DoxX 20 98 2.9E-19 T 29-03-2018 IPR032808 DoxX family CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Gene3D G3DSA:3.40.630.10 705 774 0.31 T 29-03-2018 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Pfam PF04324 BFD-like [2Fe-2S] binding domain 812 860 8.6E-11 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Gene3D G3DSA:3.40.50.740 244 530 6.8E-74 T 29-03-2018 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 SUPERFAMILY SSF53706 3 535 1.57E-165 T 29-03-2018 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 SUPERFAMILY SSF50692 564 709 1.06E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 PIRSF PIRSF036643 1 695 1.2E-134 T 29-03-2018 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Gene3D G3DSA:3.40.50.740 63 224 1.4E-42 T 29-03-2018 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 SMART SM00926 1 55 2.5E-17 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 3.2E-17 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 24 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Pfam PF01568 Molydopterin dinucleotide binding domain 570 680 1.6E-28 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Pfam PF00384 Molybdopterin oxidoreductase 67 474 2.8E-83 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Gene3D G3DSA:2.40.40.20 531 686 5.6E-37 T 29-03-2018 CKQ55_RS24500 6a50d94578a8158d0721050f476809bb 866 Gene3D G3DSA:2.20.25.90 1 54 1.2E-17 T 29-03-2018 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CKQ55_RS15310 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 1.4E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CKQ55_RS06065 3979ea1831a26a1ee6af0b0aa7be6726 117 Gene3D G3DSA:3.30.70.100 1 117 5.8E-62 T 29-03-2018 CKQ55_RS06065 3979ea1831a26a1ee6af0b0aa7be6726 117 SUPERFAMILY SSF54909 1 116 1.0E-53 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS06065 3979ea1831a26a1ee6af0b0aa7be6726 117 PIRSF PIRSF007028 1 117 2.1E-55 T 29-03-2018 IPR009874 Protein of unknown function DUF1428 CKQ55_RS06065 3979ea1831a26a1ee6af0b0aa7be6726 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 1.7E-47 T 29-03-2018 IPR009874 Protein of unknown function DUF1428 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 821 6.0E-16 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 1.5E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 619 651 5.3E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 7.3E-27 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.393 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 SUPERFAMILY SSF52374 416 668 9.86E-144 T 29-03-2018 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 SUPERFAMILY SSF52374 5 226 9.86E-144 T 29-03-2018 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 5.4E-77 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.4E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Gene3D G3DSA:3.90.740.10 168 212 0.027 T 29-03-2018 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Gene3D G3DSA:3.40.50.620 404 562 5.5E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 SUPERFAMILY SSF47323 662 859 2.99E-37 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Gene3D G3DSA:3.90.740.10 225 403 1.1E-51 T 29-03-2018 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Gene3D G3DSA:3.40.50.620 32 167 4.7E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 Gene3D G3DSA:1.10.730.10 563 859 8.0E-55 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CKQ55_RS04100 4f62d7217fb03d468000142004c92fb5 860 SUPERFAMILY SSF50677 226 415 1.78E-55 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CKQ55_RS26975 fe6ecd7758ee7cd5ec127f85a41b61a7 155 SUPERFAMILY SSF46785 12 131 1.87E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26975 fe6ecd7758ee7cd5ec127f85a41b61a7 155 Pfam PF01638 HxlR-like helix-turn-helix 23 111 9.4E-18 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type CKQ55_RS26975 fe6ecd7758ee7cd5ec127f85a41b61a7 155 Gene3D G3DSA:1.10.10.10 8 149 2.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 Gene3D G3DSA:2.60.40.10 147 228 2.1E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 SUPERFAMILY SSF49354 26 144 1.83E-42 T 29-03-2018 IPR008962 PapD-like CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 Gene3D G3DSA:2.60.40.10 28 142 2.9E-40 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 SUPERFAMILY SSF49584 148 226 7.46E-23 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 221 9.6E-15 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 PRINTS PR00969 Pili chaperone signature 73 94 1.3E-37 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 PRINTS PR00969 Pili chaperone signature 126 141 1.3E-37 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 PRINTS PR00969 Pili chaperone signature 28 37 1.3E-37 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 PRINTS PR00969 Pili chaperone signature 101 118 1.3E-37 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 PRINTS PR00969 Pili chaperone signature 161 176 1.3E-37 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS25395 56a5fb2cf36db6b3bc51b0443139fb51 229 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 145 1.4E-44 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 Gene3D G3DSA:3.20.20.70 3 297 2.3E-80 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 5.7E-104 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 297 5.7E-157 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 6.4E-20 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 6.4E-20 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 6.4E-20 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 6.4E-20 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 SMART SM01130 4 293 9.6E-84 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 SUPERFAMILY SSF51569 5 291 1.67E-80 T 29-03-2018 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 PIRSF PIRSF001365 1 297 1.2E-78 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS15830 129bef9fe73d629c15215fc88f636f06 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 50.34 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CKQ55_RS00500 f61122d5d7551914bd294897746cc110 220 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS00500 f61122d5d7551914bd294897746cc110 220 Pfam PF00849 RNA pseudouridylate synthase 41 186 6.7E-13 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS00500 f61122d5d7551914bd294897746cc110 220 SUPERFAMILY SSF55120 37 220 1.76E-42 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS00500 f61122d5d7551914bd294897746cc110 220 Gene3D G3DSA:3.30.70.1560 120 202 1.0E-24 T 29-03-2018 CKQ55_RS00500 f61122d5d7551914bd294897746cc110 220 Gene3D G3DSA:3.30.70.580 34 119 2.3E-13 T 29-03-2018 CKQ55_RS00500 f61122d5d7551914bd294897746cc110 220 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 215 1.1E-57 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 Gene3D G3DSA:3.90.930.12 5 85 1.3E-23 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.202 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.4E-72 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 SUPERFAMILY SSF56053 1 82 5.23E-23 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 Pfam PF00347 Ribosomal protein L6 90 164 1.2E-18 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 Pfam PF00347 Ribosomal protein L6 11 82 1.5E-17 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 SUPERFAMILY SSF56053 83 177 8.88E-36 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 Gene3D G3DSA:3.90.930.12 86 177 6.2E-39 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.0E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.0E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.0E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15390 8106f50dc5d5f28f65323f47afbf8491 177 PIRSF PIRSF002162 1 177 2.6E-43 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS23285 3dcf14bda2c34506c0c6d085041579f5 191 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 42 188 1.4E-64 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CKQ55_RS23285 3dcf14bda2c34506c0c6d085041579f5 191 Gene3D G3DSA:2.40.160.20 33 191 2.5E-61 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS23285 3dcf14bda2c34506c0c6d085041579f5 191 SUPERFAMILY SSF56925 32 191 1.18E-70 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS23285 3dcf14bda2c34506c0c6d085041579f5 191 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 2 191 41.087 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CKQ55_RS23285 3dcf14bda2c34506c0c6d085041579f5 191 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 38 179 2.0E-47 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CKQ55_RS27925 ac17bf9330255c3a3d2c55c0f877477c 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 301 2.8E-90 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CKQ55_RS27925 ac17bf9330255c3a3d2c55c0f877477c 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CKQ55_RS27925 ac17bf9330255c3a3d2c55c0f877477c 311 SUPERFAMILY SSF53590 4 307 2.62E-105 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CKQ55_RS27925 ac17bf9330255c3a3d2c55c0f877477c 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 77.218 T 29-03-2018 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 CKQ55_RS27925 ac17bf9330255c3a3d2c55c0f877477c 311 Gene3D G3DSA:3.90.245.10 2 311 4.5E-115 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 636 671 3.0E-8 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 SUPERFAMILY SSF56712 1 622 1.29E-141 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 SUPERFAMILY SSF57783 633 668 9.69E-6 T 29-03-2018 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Gene3D G3DSA:2.70.20.10 360 483 3.7E-21 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 SMART SM00437 275 574 1.2E-52 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 SMART SM00493 1 126 3.9E-14 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 666 2.7E-165 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Gene3D G3DSA:1.10.460.10 159 354 1.2E-25 T 29-03-2018 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Gene3D G3DSA:1.10.460.10 484 628 1.0E-10 T 29-03-2018 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 6.0E-15 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 399 415 6.0E-15 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 530 544 6.0E-15 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 6.0E-15 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 6.0E-15 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Pfam PF01751 Toprim domain 3 132 3.6E-11 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 327 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Pfam PF13342 C-terminal repeat of topoisomerase 711 772 2.5E-20 T 29-03-2018 IPR025589 Topoisomerase C-terminal repeat CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 SMART SM00436 126 221 6.5E-8 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Pfam PF01131 DNA topoisomerase 155 608 1.0E-85 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Gene3D G3DSA:3.30.65.10 629 680 2.5E-10 T 29-03-2018 CKQ55_RS31675 542b84bc0fac149335a6647ff7bf457e 775 Gene3D G3DSA:3.40.50.140 1 154 8.4E-32 T 29-03-2018 CKQ55_RS22455 f4359a3a94f7579e2e4594257795d239 257 Gene3D G3DSA:3.40.190.10 8 138 5.4E-37 T 29-03-2018 CKQ55_RS22455 f4359a3a94f7579e2e4594257795d239 257 SUPERFAMILY SSF53850 1 254 3.98E-69 T 29-03-2018 CKQ55_RS22455 f4359a3a94f7579e2e4594257795d239 257 Gene3D G3DSA:3.40.190.10 139 257 1.4E-25 T 29-03-2018 CKQ55_RS22455 f4359a3a94f7579e2e4594257795d239 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 250 2.7E-79 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CKQ55_RS22455 f4359a3a94f7579e2e4594257795d239 257 SMART SM00062 25 253 3.2E-75 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS22455 f4359a3a94f7579e2e4594257795d239 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 251 1.3E-65 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 Gene3D G3DSA:2.10.109.10 81 205 4.7E-19 T 29-03-2018 CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 SUPERFAMILY SSF51306 76 202 7.06E-23 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 Pfam PF12844 Helix-turn-helix domain 5 63 1.8E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 SMART SM00530 6 60 5.9E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 SUPERFAMILY SSF47413 3 62 4.61E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 Gene3D G3DSA:1.10.260.40 2 65 4.2E-14 T 29-03-2018 CKQ55_RS00415 53027f709ed577ccb1ec64f92af7c6ff 210 Pfam PF00717 Peptidase S24-like 118 163 1.9E-13 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 Gene3D G3DSA:2.10.109.10 81 205 4.7E-19 T 29-03-2018 CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 SUPERFAMILY SSF51306 76 202 7.06E-23 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 Pfam PF12844 Helix-turn-helix domain 5 63 1.8E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 SMART SM00530 6 60 5.9E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 SUPERFAMILY SSF47413 3 62 4.61E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 Gene3D G3DSA:1.10.260.40 2 65 4.2E-14 T 29-03-2018 CKQ55_RS00045 53027f709ed577ccb1ec64f92af7c6ff 210 Pfam PF00717 Peptidase S24-like 118 163 1.9E-13 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS25770 60b6ab25f1b6c911c75381c42be57375 346 SUPERFAMILY SSF55347 129 283 4.8E-25 T 29-03-2018 CKQ55_RS25770 60b6ab25f1b6c911c75381c42be57375 346 Gene3D G3DSA:3.40.50.720 1 135 1.9E-38 T 29-03-2018 CKQ55_RS25770 60b6ab25f1b6c911c75381c42be57375 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 8.0E-25 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS25770 60b6ab25f1b6c911c75381c42be57375 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 2.6E-15 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS25770 60b6ab25f1b6c911c75381c42be57375 346 SUPERFAMILY SSF51735 2 186 9.63E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS25770 60b6ab25f1b6c911c75381c42be57375 346 Gene3D G3DSA:3.30.360.10 136 346 4.5E-35 T 29-03-2018 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 SUPERFAMILY SSF51735 160 334 1.06E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.3E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 SUPERFAMILY SSF50129 1 186 4.57E-73 T 29-03-2018 IPR011032 GroES-like CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 SMART SM00829 12 367 0.0016 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.8E-224 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 Pfam PF00107 Zinc-binding dehydrogenase 197 329 6.9E-25 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 SUPERFAMILY SSF50129 318 369 2.68E-12 T 29-03-2018 IPR011032 GroES-like CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 Gene3D G3DSA:3.90.180.10 1 188 2.1E-60 T 29-03-2018 CKQ55_RS28175 5242828bc8b2d393ae9bf22d9cee84ec 372 Gene3D G3DSA:3.40.50.720 189 310 1.0E-25 T 29-03-2018 CKQ55_RS01050 ba30c1c16e598d8c5e92744b5a059215 276 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 264 2.4E-97 T 29-03-2018 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 CKQ55_RS01050 ba30c1c16e598d8c5e92744b5a059215 276 Gene3D G3DSA:1.20.1250.20 1 107 1.3E-4 T 29-03-2018 CKQ55_RS01050 ba30c1c16e598d8c5e92744b5a059215 276 Pfam PF03239 Iron permease FTR1 family 1 255 1.2E-71 T 29-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CKQ55_RS01050 ba30c1c16e598d8c5e92744b5a059215 276 SUPERFAMILY SSF103473 5 229 1.7E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01050 ba30c1c16e598d8c5e92744b5a059215 276 Gene3D G3DSA:3.40.50.360 108 252 0.0017 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS06330 e3850b3525bf60a21e57260b982e0f95 196 Gene3D G3DSA:3.40.50.880 1 190 3.2E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS06330 e3850b3525bf60a21e57260b982e0f95 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 6.2E-61 T 29-03-2018 IPR006287 Protein DJ-1 CKQ55_RS06330 e3850b3525bf60a21e57260b982e0f95 196 SUPERFAMILY SSF52317 5 188 1.57E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS06330 e3850b3525bf60a21e57260b982e0f95 196 Pfam PF01965 DJ-1/PfpI family 4 170 1.4E-45 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 Gene3D G3DSA:3.30.565.10 384 558 1.7E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 Pfam PF07694 5TMR of 5TMR-LYT 28 196 7.7E-58 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 Gene3D G3DSA:3.30.450.40 229 372 4.3E-7 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 SUPERFAMILY SSF55781 243 359 7.61E-8 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 SUPERFAMILY SSF55874 424 557 2.88E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 SMART SM00065 218 365 2.6E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 Pfam PF06580 Histidine kinase 371 447 8.8E-24 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CKQ55_RS21945 8ed7f8908ce8b59e320008182a74a03c 562 Pfam PF13492 GAF domain 242 355 8.1E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.0064 T 29-03-2018 CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 Gene3D G3DSA:3.40.50.720 1 160 4.1E-40 T 29-03-2018 CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 Gene3D G3DSA:3.40.50.720 161 242 2.3E-19 T 29-03-2018 CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 4.0E-136 T 29-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 SUPERFAMILY SSF51735 2 242 5.59E-70 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.8E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.8E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.8E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.8E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14615 3495988d784d786e36456ff9565dd0c9 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 5.8E-54 T 29-03-2018 CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 74.137 T 29-03-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 SUPERFAMILY SSF53686 7 326 2.75E-84 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 316 9.8E-54 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 PIRSF PIRSF006278 1 328 5.1E-94 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 Gene3D G3DSA:3.40.50.1100 148 327 2.4E-25 T 29-03-2018 CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 1.4E-138 T 29-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CKQ55_RS23455 c14db75a29fd7ca3f37f1f50fd1496a8 328 Gene3D G3DSA:3.40.50.1100 50 147 1.3E-29 T 29-03-2018 CKQ55_RS15630 ba07589bac50e4c2ec87d437c230c3b2 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 1.5E-15 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CKQ55_RS15630 ba07589bac50e4c2ec87d437c230c3b2 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 199 22.243 T 29-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CKQ55_RS23225 38ee8b9909b5029c94d24608818d0531 459 SUPERFAMILY SSF103473 7 192 3.92E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23225 38ee8b9909b5029c94d24608818d0531 459 SUPERFAMILY SSF103473 245 450 3.92E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23225 38ee8b9909b5029c94d24608818d0531 459 Gene3D G3DSA:1.20.1250.20 249 458 2.1E-26 T 29-03-2018 CKQ55_RS23225 38ee8b9909b5029c94d24608818d0531 459 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 417 2.0E-76 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CKQ55_RS23225 38ee8b9909b5029c94d24608818d0531 459 Pfam PF07690 Major Facilitator Superfamily 15 406 8.2E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS23225 38ee8b9909b5029c94d24608818d0531 459 Gene3D G3DSA:1.20.1250.20 3 194 2.8E-27 T 29-03-2018 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 5.0E-152 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 Gene3D G3DSA:3.30.70.20 200 364 4.1E-11 T 29-03-2018 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 50.789 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 SUPERFAMILY SSF46548 139 256 2.09E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 5.1E-19 T 29-03-2018 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 Gene3D G3DSA:3.30.70.20 62 199 3.9E-4 T 29-03-2018 CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS10550 b5e280c2cfb71901a952b53704aaea00 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 5.4E-22 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 Gene3D G3DSA:2.40.50.100 291 350 7.5E-7 T 29-03-2018 CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 SMART SM00382 26 209 1.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 Pfam PF00005 ABC transporter 17 159 6.7E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 SUPERFAMILY SSF50331 234 350 3.4E-21 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 Gene3D G3DSA:2.40.50.100 237 290 8.7E-7 T 29-03-2018 CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 SUPERFAMILY SSF52540 1 240 4.67E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 Gene3D G3DSA:3.40.50.300 1 234 5.4E-75 T 29-03-2018 CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 Pfam PF08402 TOBE domain 270 342 1.2E-10 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS09925 dd85e05fe41a64744c9a92c641f34a3b 357 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 Pfam PF05746 DALR anticodon binding domain 582 679 5.8E-7 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.7E-215 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.055 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 5.5E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 5.5E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.5E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 5.5E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.5E-37 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 Gene3D G3DSA:1.10.730.10 575 684 1.7E-9 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 SUPERFAMILY SSF109604 339 511 1.88E-17 T 29-03-2018 CKQ55_RS14055 bed7d8beed183bc575177f1e20e57eea 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 Gene3D G3DSA:3.20.20.150 5 319 1.4E-49 T 29-03-2018 CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 Gene3D G3DSA:3.10.180.10 320 427 8.5E-13 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 SUPERFAMILY SSF51658 2 270 2.07E-71 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 SUPERFAMILY SSF54593 290 612 1.37E-50 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 289 418 1.6E-25 T 29-03-2018 CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 Pfam PF01261 Xylose isomerase-like TIM barrel 19 217 3.6E-33 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS24975 ffa2ae0278ed0abbccedb5ede2e43aa1 617 Gene3D G3DSA:3.10.180.10 429 616 2.0E-30 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 2.4E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 SUPERFAMILY SSF53850 102 303 8.14E-29 T 29-03-2018 CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 Gene3D G3DSA:1.10.10.10 11 95 7.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 Gene3D G3DSA:3.40.190.10 184 270 3.5E-11 T 29-03-2018 CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 SUPERFAMILY SSF46785 10 121 1.85E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 Pfam PF03466 LysR substrate binding domain 103 300 6.8E-25 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 2.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 2.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 2.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03215 963860d63a82ee192b8c49c7c5266863 307 Gene3D G3DSA:3.40.190.10 99 183 2.6E-10 T 29-03-2018 CKQ55_RS07210 af5127bf8512f2cc4f69ef989735b83f 695 Gene3D G3DSA:3.40.50.300 498 689 2.5E-17 T 29-03-2018 CKQ55_RS07210 af5127bf8512f2cc4f69ef989735b83f 695 SUPERFAMILY SSF52540 503 674 3.75E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07210 af5127bf8512f2cc4f69ef989735b83f 695 Gene3D G3DSA:3.30.1890.10 46 417 4.1E-25 T 29-03-2018 CKQ55_RS07210 af5127bf8512f2cc4f69ef989735b83f 695 Pfam PF02706 Chain length determinant protein 16 105 1.4E-6 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CKQ55_RS07210 af5127bf8512f2cc4f69ef989735b83f 695 Pfam PF06564 Cellulose biosynthesis protein BcsQ 513 658 1.0E-6 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CKQ55_RS26625 da8310b2f3969420be8071e489b39520 206 Pfam PF01810 LysE type translocator 16 203 3.4E-29 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS26625 da8310b2f3969420be8071e489b39520 206 PIRSF PIRSF006324 1 206 2.5E-48 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS09975 7be91c7cd39c15b80e36bab55a77a316 501 Gene3D G3DSA:3.40.605.10 2 264 2.4E-82 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09975 7be91c7cd39c15b80e36bab55a77a316 501 Pfam PF00171 Aldehyde dehydrogenase family 15 480 1.1E-137 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09975 7be91c7cd39c15b80e36bab55a77a316 501 Gene3D G3DSA:3.40.309.10 265 463 1.4E-62 T 29-03-2018 CKQ55_RS09975 7be91c7cd39c15b80e36bab55a77a316 501 SUPERFAMILY SSF53720 2 487 7.98E-145 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09975 7be91c7cd39c15b80e36bab55a77a316 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 485 2.3E-191 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 CKQ55_RS10575 d93ed9a3686c8dbc2a3352d3ea584a6b 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.785 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 CKQ55_RS10575 d93ed9a3686c8dbc2a3352d3ea584a6b 181 Gene3D G3DSA:3.30.420.10 2 181 2.5E-26 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS10575 d93ed9a3686c8dbc2a3352d3ea584a6b 181 SUPERFAMILY SSF53098 3 180 2.06E-48 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS10575 d93ed9a3686c8dbc2a3352d3ea584a6b 181 SMART SM00479 7 180 1.1E-20 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS10575 d93ed9a3686c8dbc2a3352d3ea584a6b 181 Pfam PF00929 Exonuclease 9 170 3.2E-37 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS17065 af07ef706423344e813ffd58b1f32500 418 Gene3D G3DSA:1.20.1250.20 5 194 1.4E-8 T 29-03-2018 CKQ55_RS17065 af07ef706423344e813ffd58b1f32500 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 9.3E-215 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CKQ55_RS17065 af07ef706423344e813ffd58b1f32500 418 SUPERFAMILY SSF103473 9 406 3.27E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17065 af07ef706423344e813ffd58b1f32500 418 Gene3D G3DSA:1.20.1250.20 198 410 5.6E-21 T 29-03-2018 CKQ55_RS17065 af07ef706423344e813ffd58b1f32500 418 Pfam PF03825 Nucleoside H+ symporter 1 406 4.2E-181 T 29-03-2018 CKQ55_RS17065 af07ef706423344e813ffd58b1f32500 418 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 48.611 T 29-03-2018 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 CKQ55_RS12990 9879d7beaad3c0360e16f5decc2fcc7d 388 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 42 102 1.4E-8 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CKQ55_RS12990 9879d7beaad3c0360e16f5decc2fcc7d 388 Pfam PF00756 Putative esterase 149 377 1.3E-20 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CKQ55_RS12990 9879d7beaad3c0360e16f5decc2fcc7d 388 SUPERFAMILY SSF53474 135 388 1.77E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS12990 9879d7beaad3c0360e16f5decc2fcc7d 388 Gene3D G3DSA:2.60.40.10 35 130 1.4E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS12990 9879d7beaad3c0360e16f5decc2fcc7d 388 SUPERFAMILY SSF81296 43 103 6.65E-9 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS12990 9879d7beaad3c0360e16f5decc2fcc7d 388 Gene3D G3DSA:3.40.50.1820 131 388 6.1E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS07670 72aca26b028956f85a59af4f38bff274 266 Gene3D G3DSA:3.40.50.1980 141 266 2.1E-21 T 29-03-2018 CKQ55_RS07670 72aca26b028956f85a59af4f38bff274 266 SUPERFAMILY SSF53807 25 262 2.12E-57 T 29-03-2018 CKQ55_RS07670 72aca26b028956f85a59af4f38bff274 266 Pfam PF01497 Periplasmic binding protein 26 240 1.2E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS07670 72aca26b028956f85a59af4f38bff274 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 46.542 T 29-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 CKQ55_RS07670 72aca26b028956f85a59af4f38bff274 266 Gene3D G3DSA:3.40.50.1980 22 140 1.0E-29 T 29-03-2018 CKQ55_RS00135 a88925b853f8cc2f8459e9cf934fe500 141 Pfam PF13551 Winged helix-turn helix 11 73 7.9E-21 T 29-03-2018 CKQ55_RS00135 a88925b853f8cc2f8459e9cf934fe500 141 Gene3D G3DSA:1.10.10.60 15 46 2.4E-5 T 29-03-2018 CKQ55_RS00135 a88925b853f8cc2f8459e9cf934fe500 141 SUPERFAMILY SSF46689 17 114 2.33E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS30075 a88925b853f8cc2f8459e9cf934fe500 141 Pfam PF13551 Winged helix-turn helix 11 73 7.9E-21 T 29-03-2018 CKQ55_RS30075 a88925b853f8cc2f8459e9cf934fe500 141 Gene3D G3DSA:1.10.10.60 15 46 2.4E-5 T 29-03-2018 CKQ55_RS30075 a88925b853f8cc2f8459e9cf934fe500 141 SUPERFAMILY SSF46689 17 114 2.33E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 SMART SM00490 491 588 8.2E-8 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 Pfam PF00270 DEAD/DEAH box helicase 202 363 1.2E-14 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 731 26.133 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 Gene3D G3DSA:3.40.50.300 388 620 7.0E-22 T 29-03-2018 CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 SMART SM00487 194 389 1.2E-15 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 TIGRFAM TIGR00595 priA: primosomal protein N' 220 729 6.8E-215 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 Gene3D G3DSA:3.40.50.300 195 360 5.3E-26 T 29-03-2018 CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 Pfam PF00271 Helicase conserved C-terminal domain 521 588 1.2E-5 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 SUPERFAMILY SSF52540 214 439 7.62E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12280 be4c46000355f49233292dd42e43b555 731 SUPERFAMILY SSF52540 502 600 7.62E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14370 536bf6d4647f094d476557c66c78c5af 207 Gene3D G3DSA:3.40.30.10 1 97 6.4E-30 T 29-03-2018 CKQ55_RS14370 536bf6d4647f094d476557c66c78c5af 207 SUPERFAMILY SSF47616 72 200 1.67E-25 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS14370 536bf6d4647f094d476557c66c78c5af 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 2.3E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS14370 536bf6d4647f094d476557c66c78c5af 207 SUPERFAMILY SSF52833 1 84 3.05E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS14370 536bf6d4647f094d476557c66c78c5af 207 Gene3D G3DSA:1.20.1050.10 98 203 8.4E-23 T 29-03-2018 CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 SUPERFAMILY SSF52317 254 456 1.16E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 190.266 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 SUPERFAMILY SSF52540 1 228 3.9E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 Gene3D G3DSA:3.40.50.880 252 497 4.8E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 447 2.4E-59 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 Gene3D G3DSA:3.40.50.300 2 239 4.7E-49 T 29-03-2018 CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 494 6.7E-160 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CKQ55_RS18380 aa4219fdfd06c9f22f0452d42a3782f5 507 Pfam PF13500 AAA domain 4 227 3.1E-22 T 29-03-2018 CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 Gene3D G3DSA:1.20.1250.20 231 428 2.9E-21 T 29-03-2018 CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 SUPERFAMILY SSF103473 18 430 1.23E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 Gene3D G3DSA:1.20.1250.20 17 230 7.4E-25 T 29-03-2018 CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 Pfam PF07690 Major Facilitator Superfamily 258 419 1.9E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 418 3.4E-144 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS19855 ac2ed3c982c00175889ac0445bfd7aa9 432 Pfam PF00083 Sugar (and other) transporter 24 221 6.2E-26 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS16665 eca0f153476e4520d46fa20a837599fd 205 PIRSF PIRSF005624 3 203 2.1E-49 T 29-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CKQ55_RS16665 eca0f153476e4520d46fa20a837599fd 205 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 201 5.5E-101 T 29-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CKQ55_RS16665 eca0f153476e4520d46fa20a837599fd 205 Gene3D G3DSA:3.40.50.300 8 175 3.2E-17 T 29-03-2018 CKQ55_RS16665 eca0f153476e4520d46fa20a837599fd 205 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 47.178 T 29-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CKQ55_RS16665 eca0f153476e4520d46fa20a837599fd 205 SUPERFAMILY SSF52540 4 199 1.62E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16665 eca0f153476e4520d46fa20a837599fd 205 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 178 3.2E-40 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CKQ55_RS14790 03fafc953eaa98afc103aac78ff81927 128 Pfam PF12568 Acetyltransferase (GNAT) domain 2 124 7.4E-50 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS14790 03fafc953eaa98afc103aac78ff81927 128 Hamap MF_02018 PanD maturation factor [panM]. 1 126 32.46 T 29-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 CKQ55_RS14790 03fafc953eaa98afc103aac78ff81927 128 Gene3D G3DSA:3.40.630.30 1 127 7.8E-11 T 29-03-2018 CKQ55_RS14790 03fafc953eaa98afc103aac78ff81927 128 SUPERFAMILY SSF55729 6 119 7.21E-11 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS21145 89b9bf1d3fda0454be0b86c7e2c92ffc 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21145 89b9bf1d3fda0454be0b86c7e2c92ffc 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.992 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21145 89b9bf1d3fda0454be0b86c7e2c92ffc 325 Pfam PF00146 NADH dehydrogenase 17 317 1.1E-120 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21145 89b9bf1d3fda0454be0b86c7e2c92ffc 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS05970 c79f7c63a33da825c477daa60328e396 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 2.1E-33 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS05970 c79f7c63a33da825c477daa60328e396 72 Gene3D G3DSA:1.20.1280.40 6 71 7.5E-34 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS05970 c79f7c63a33da825c477daa60328e396 72 SUPERFAMILY SSF68989 2 72 1.16E-31 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS08840 69a1bc98f67dc63feef7a2b9a57f7d21 342 Gene3D G3DSA:3.40.50.150 159 342 1.7E-33 T 29-03-2018 CKQ55_RS08840 69a1bc98f67dc63feef7a2b9a57f7d21 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.733 T 29-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS08840 69a1bc98f67dc63feef7a2b9a57f7d21 342 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.7E-55 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS08840 69a1bc98f67dc63feef7a2b9a57f7d21 342 SUPERFAMILY SSF53335 155 316 8.51E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS08840 69a1bc98f67dc63feef7a2b9a57f7d21 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS08840 69a1bc98f67dc63feef7a2b9a57f7d21 342 Pfam PF05175 Methyltransferase small domain 166 333 3.3E-60 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 SMART SM00228 246 323 9.7E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 4.3E-41 T 29-03-2018 IPR020992 Tail specific protease, C-terminal CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 Gene3D G3DSA:2.30.42.10 246 329 1.6E-14 T 29-03-2018 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 Gene3D G3DSA:3.30.750.44 155 245 1.5E-21 T 29-03-2018 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 SUPERFAMILY SSF50156 219 343 4.78E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 SMART SM00245 326 531 1.5E-78 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 SUPERFAMILY SSF52096 179 264 1.38E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 SUPERFAMILY SSF52096 350 535 1.38E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.3E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 7.7E-127 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 Gene3D G3DSA:3.90.226.10 330 595 2.9E-58 T 29-03-2018 CKQ55_RS23875 e6ccf0d77046ef920e21c413cb287c34 682 Pfam PF03572 Peptidase family S41 356 528 1.0E-52 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 Gene3D G3DSA:1.10.357.20 162 336 5.5E-40 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 Gene3D G3DSA:3.10.580.10 70 153 5.1E-11 T 29-03-2018 CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 SUPERFAMILY SSF54631 21 158 1.22E-17 T 29-03-2018 CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 SUPERFAMILY SSF161093 163 334 8.63E-48 T 29-03-2018 CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 Gene3D G3DSA:3.10.580.10 2 69 3.4E-4 T 29-03-2018 CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 Pfam PF00571 CBS domain 22 77 5.3E-4 T 29-03-2018 IPR000644 CBS domain CKQ55_RS14515 5d9300778db5b8e9e41cdff49bce814a 337 Pfam PF01769 Divalent cation transporter 206 327 4.1E-27 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 SUPERFAMILY SSF52317 254 453 1.15E-30 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 9 452 2.3E-135 T 29-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 Gene3D G3DSA:3.40.50.880 189 435 1.6E-22 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 194 1.0E-20 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 SUPERFAMILY SSF52540 7 201 5.65E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 Gene3D G3DSA:3.40.50.300 3 188 2.1E-37 T 29-03-2018 CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 444 1.4E-40 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CKQ55_RS18300 7fd276bf9a1df34004e7821960aa8261 459 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 5 445 43.326 T 29-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CKQ55_RS09320 bdf215946c633ce1e051c6edce3c88b0 92 SUPERFAMILY SSF143414 3 88 2.75E-31 T 29-03-2018 CKQ55_RS09320 bdf215946c633ce1e051c6edce3c88b0 92 Gene3D G3DSA:3.90.650.10 2 87 7.1E-4 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS09320 bdf215946c633ce1e051c6edce3c88b0 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS09320 bdf215946c633ce1e051c6edce3c88b0 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 43 2.0E-15 T 29-03-2018 CKQ55_RS09320 bdf215946c633ce1e051c6edce3c88b0 92 Pfam PF00936 BMC domain 4 79 2.9E-29 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09320 bdf215946c633ce1e051c6edce3c88b0 92 SMART SM00877 3 79 1.6E-36 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 4.7E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 4.7E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 4.7E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 379 2.6E-24 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 SUPERFAMILY SSF69189 288 381 9.22E-24 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 SUPERFAMILY SSF56601 9 288 6.14E-76 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 268 1.3E-101 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 SMART SM00936 288 379 4.5E-32 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 Gene3D G3DSA:2.60.410.10 307 378 4.9E-17 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS04155 74da8b1740d075f44dcb0bbfcf6c561a 399 Gene3D G3DSA:3.40.710.10 10 306 2.1E-48 T 29-03-2018 CKQ55_RS01825 e7883ab05af5604168e2c5565cb0e43d 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 8.7E-20 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CKQ55_RS01825 e7883ab05af5604168e2c5565cb0e43d 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 38.259 T 29-03-2018 IPR022866 Heat shock protein HspQ CKQ55_RS01825 e7883ab05af5604168e2c5565cb0e43d 105 SMART SM00992 3 102 7.9E-39 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CKQ55_RS01825 e7883ab05af5604168e2c5565cb0e43d 105 Gene3D G3DSA:2.30.30.390 1 105 2.4E-19 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CKQ55_RS01825 e7883ab05af5604168e2c5565cb0e43d 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 6.8E-34 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CKQ55_RS01825 e7883ab05af5604168e2c5565cb0e43d 105 SUPERFAMILY SSF141255 4 95 4.32E-30 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CKQ55_RS26525 0839e895fb62689237b4ab2b474e4849 461 SUPERFAMILY SSF53720 8 459 1.15E-140 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS26525 0839e895fb62689237b4ab2b474e4849 461 Gene3D G3DSA:3.40.309.10 251 442 2.0E-66 T 29-03-2018 CKQ55_RS26525 0839e895fb62689237b4ab2b474e4849 461 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 260 271 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS26525 0839e895fb62689237b4ab2b474e4849 461 Gene3D G3DSA:3.40.605.10 3 250 7.0E-71 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS26525 0839e895fb62689237b4ab2b474e4849 461 Pfam PF00171 Aldehyde dehydrogenase family 8 456 2.3E-141 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Pfam PF14559 Tetratricopeptide repeat 616 676 3.8E-8 T 29-03-2018 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Gene3D G3DSA:1.25.40.10 475 561 3.4E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SMART SM00028 604 637 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SMART SM00028 304 337 0.034 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SMART SM00028 386 419 0.67 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SMART SM00028 113 146 320.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SMART SM00028 462 495 130.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SMART SM00028 352 385 15.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Pfam PF13432 Tetratricopeptide repeat 275 338 1.2E-7 T 29-03-2018 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Pfam PF13432 Tetratricopeptide repeat 357 418 1.1E-5 T 29-03-2018 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Gene3D G3DSA:1.25.40.10 162 350 2.8E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SUPERFAMILY SSF48452 56 208 5.16E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SUPERFAMILY SSF48452 275 431 3.79E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Gene3D G3DSA:1.25.40.10 29 160 7.4E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Gene3D G3DSA:1.25.40.10 562 1140 2.3E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SUPERFAMILY SSF48452 578 738 5.55E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 803 1140 4.5E-121 T 29-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 Gene3D G3DSA:1.25.40.10 351 474 1.5E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SUPERFAMILY SSF48452 468 546 4.85E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14290 5d4375d10cbf07ed8a36c10491a562b4 1161 SUPERFAMILY SSF48452 610 660 4.85E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS27225 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS27225 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27225 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27225 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 29-03-2018 CKQ55_RS27225 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS13735 ce415d261da38102fca6e6111f994427 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 210 1.7E-66 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CKQ55_RS13735 ce415d261da38102fca6e6111f994427 424 Gene3D G3DSA:3.40.50.2000 47 217 6.4E-4 T 29-03-2018 CKQ55_RS13735 ce415d261da38102fca6e6111f994427 424 Pfam PF00534 Glycosyl transferases group 1 247 397 1.0E-10 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS13735 ce415d261da38102fca6e6111f994427 424 Gene3D G3DSA:3.40.50.2000 218 403 1.2E-14 T 29-03-2018 CKQ55_RS13735 ce415d261da38102fca6e6111f994427 424 SUPERFAMILY SSF53756 56 418 1.61E-17 T 29-03-2018 CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.332 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 SUPERFAMILY SSF53335 18 249 2.17E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 4.1E-111 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 Gene3D G3DSA:3.40.50.150 2 250 3.3E-46 T 29-03-2018 CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CKQ55_RS11750 cc26f0a0547d4268ffdc8dafb8fdf6c7 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 2.6E-88 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CKQ55_RS25365 64997a75ec6c1759a2bfdf3019989a53 263 Pfam PF04393 Protein of unknown function (DUF535) 29 242 4.1E-46 T 29-03-2018 IPR007488 Protein of unknown function DUF535 CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 Gene3D G3DSA:3.40.190.10 94 194 9.1E-4 T 29-03-2018 CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 Pfam PF03466 LysR substrate binding domain 96 284 2.9E-11 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 SUPERFAMILY SSF46785 2 85 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 Gene3D G3DSA:1.10.10.10 1 86 7.7E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 Gene3D G3DSA:3.40.190.10 195 263 9.3E-5 T 29-03-2018 CKQ55_RS08565 8a488fefae71979cf03d7ac2c10f8f77 299 SUPERFAMILY SSF53850 90 286 1.3E-25 T 29-03-2018 CKQ55_RS28575 264d14b8b9d16beedb53203811bc744a 499 SUPERFAMILY SSF53720 12 498 1.26E-159 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28575 264d14b8b9d16beedb53203811bc744a 499 Gene3D G3DSA:3.40.309.10 288 481 8.9E-63 T 29-03-2018 CKQ55_RS28575 264d14b8b9d16beedb53203811bc744a 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28575 264d14b8b9d16beedb53203811bc744a 499 Gene3D G3DSA:3.40.605.10 8 287 1.4E-99 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28575 264d14b8b9d16beedb53203811bc744a 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28575 264d14b8b9d16beedb53203811bc744a 499 Pfam PF00171 Aldehyde dehydrogenase family 32 495 1.8E-161 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS26755 d08d976d577bb80cd7a79a897991f826 109 Gene3D G3DSA:3.30.70.100 2 100 3.7E-12 T 29-03-2018 CKQ55_RS26755 d08d976d577bb80cd7a79a897991f826 109 SUPERFAMILY SSF54909 4 89 1.61E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS26755 d08d976d577bb80cd7a79a897991f826 109 Pfam PF07978 NIPSNAP 4 78 7.4E-8 T 29-03-2018 IPR012577 NIPSNAP CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 PIRSF PIRSF000171 1 575 3.9E-43 T 29-03-2018 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 Pfam PF00890 FAD binding domain 7 397 1.1E-115 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.1E-5 T 29-03-2018 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-5 T 29-03-2018 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 29-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 Gene3D G3DSA:4.10.80.40 551 576 1.5E-13 T 29-03-2018 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 SUPERFAMILY SSF56425 227 358 9.27E-43 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.3E-247 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 Gene3D G3DSA:1.20.58.100 448 550 6.8E-26 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.6E-38 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 SUPERFAMILY SSF46977 444 589 5.89E-46 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 Gene3D G3DSA:3.50.50.60 2 447 2.0E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.3E-10 T 29-03-2018 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-10 T 29-03-2018 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 SUPERFAMILY SSF51905 3 250 2.24E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS10610 06772ef175086f8055a5736871f765e8 596 SUPERFAMILY SSF51905 361 417 2.24E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 SUPERFAMILY SSF53927 1 149 6.86E-38 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 62 139 8.1E-11 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 Gene3D G3DSA:3.40.140.10 180 294 3.6E-15 T 29-03-2018 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 284 1.7E-84 T 29-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 PIRSF PIRSF006334 14 293 2.1E-102 T 29-03-2018 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 48.442 T 29-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 Gene3D G3DSA:3.40.140.10 41 171 1.1E-25 T 29-03-2018 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 SUPERFAMILY SSF53927 152 293 6.52E-43 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CKQ55_RS21805 f52208471655341291c35cad3cc3ce01 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 3.2E-42 T 29-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Gene3D G3DSA:3.90.1170.30 47 116 0.0018 T 29-03-2018 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Gene3D G3DSA:3.90.1170.30 1 46 7.0E-14 T 29-03-2018 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Pfam PF00364 Biotin-requiring enzyme 5 76 5.1E-16 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 9.3E-80 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 SUPERFAMILY SSF52777 177 406 8.45E-89 T 29-03-2018 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Gene3D G3DSA:3.30.559.10 160 405 2.2E-89 T 29-03-2018 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 SUPERFAMILY SSF47005 106 151 7.46E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Gene3D G3DSA:4.10.320.10 117 159 2.7E-15 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 SUPERFAMILY SSF51230 2 94 3.4E-23 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 Pfam PF02817 e3 binding domain 114 147 2.6E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS03725 6edc1d01cbe70235f2a9d90910618f85 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 407 1.6E-192 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 SUPERFAMILY SSF51735 109 286 1.14E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 11 285 3.7E-66 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 Gene3D G3DSA:3.40.50.720 120 286 1.5E-30 T 29-03-2018 CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 SUPERFAMILY SSF53223 4 108 1.55E-33 T 29-03-2018 CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 Gene3D G3DSA:3.40.50.10860 1 119 2.4E-43 T 29-03-2018 CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 287 32.087 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS08240 6e5e1ee684286817860cc559374cf41c 287 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 5.7E-30 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS11855 db0ae8803df166ddaff07ef24a9903db 235 Gene3D G3DSA:3.30.450.40 49 231 1.7E-8 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS11855 db0ae8803df166ddaff07ef24a9903db 235 Pfam PF04340 Protein of unknown function, DUF484 13 232 3.8E-79 T 29-03-2018 IPR007435 Protein of unknown function DUF484 CKQ55_RS11495 9ed02712fd957f9e0bc13e769d4a7e5f 631 Pfam PF13667 ThiC-associated domain 27 108 1.1E-32 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CKQ55_RS11495 9ed02712fd957f9e0bc13e769d4a7e5f 631 Pfam PF01964 Radical SAM ThiC family 148 596 6.8E-200 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CKQ55_RS11495 9ed02712fd957f9e0bc13e769d4a7e5f 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.368 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CKQ55_RS11495 9ed02712fd957f9e0bc13e769d4a7e5f 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 1.1E-224 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CKQ55_RS18755 b3287c4c9a37a3038c8f2fe46b67d6fa 125 Gene3D G3DSA:3.10.450.50 3 123 1.7E-31 T 29-03-2018 CKQ55_RS18755 b3287c4c9a37a3038c8f2fe46b67d6fa 125 PIRSF PIRSF029394 1 125 1.2E-42 T 29-03-2018 IPR016918 Uncharacterised conserved protein UCP029394 CKQ55_RS18755 b3287c4c9a37a3038c8f2fe46b67d6fa 125 SUPERFAMILY SSF54427 3 124 1.46E-35 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Pfam PF00575 S1 RNA binding domain 641 724 6.2E-19 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SUPERFAMILY SSF50249 222 641 8.0E-142 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.9E-15 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Gene3D G3DSA:2.40.50.140 641 726 1.6E-20 T 29-03-2018 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.485 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Pfam PF08206 Ribonuclease B OB domain 87 144 4.3E-22 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 9.3E-284 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SMART SM00316 642 725 2.0E-16 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SUPERFAMILY SSF50249 138 235 5.52E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SUPERFAMILY SSF50249 644 724 2.69E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 2.1E-282 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SMART SM00955 260 588 7.8E-184 T 29-03-2018 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Pfam PF00773 RNB domain 260 587 4.2E-109 T 29-03-2018 CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SUPERFAMILY SSF50249 67 145 1.94E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 Gene3D G3DSA:1.10.10.10 14 79 2.0E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10485 00fed52ad3778889e4aa3187a77ecaa3 816 SMART SM00357 86 145 2.1E-16 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 SUPERFAMILY SSF56281 497 740 1.9E-45 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 SMART SM00849 508 689 2.4E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 Gene3D G3DSA:3.60.15.10 492 718 1.1E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 Pfam PF00753 Metallo-beta-lactamase superfamily 505 682 1.2E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 Pfam PF03772 Competence protein 201 488 5.0E-50 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 404 1.9E-43 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CKQ55_RS02095 7e560640ebb6a6282ef7cfef832e5dd4 751 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 67 718 3.2E-233 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CKQ55_RS31325 f0587d68de2a016712ca0331130c1db0 183 Pfam PF00145 C-5 cytosine-specific DNA methylase 115 170 1.1E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS31325 f0587d68de2a016712ca0331130c1db0 183 Gene3D G3DSA:3.90.120.10 6 161 8.6E-13 T 29-03-2018 CKQ55_RS31325 f0587d68de2a016712ca0331130c1db0 183 SUPERFAMILY SSF53335 41 174 5.54E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Gene3D G3DSA:3.30.565.10 529 692 3.5E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SUPERFAMILY SSF52172 701 814 4.97E-35 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 2.5E-29 T 29-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Gene3D G3DSA:1.10.287.130 473 528 5.8E-19 T 29-03-2018 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SUPERFAMILY SSF47384 453 535 2.16E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SMART SM00388 469 534 1.7E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Gene3D G3DSA:3.30.450.20 211 472 6.7E-7 T 29-03-2018 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 7.4E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SUPERFAMILY SSF52172 824 944 2.42E-38 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SMART SM00448 825 936 2.5E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 5.2E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 26.569 T 29-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SMART SM00387 581 692 4.8E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 SUPERFAMILY SSF55874 523 694 3.67E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Pfam PF00072 Response regulator receiver domain 827 935 4.5E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 Gene3D G3DSA:3.40.50.2300 803 948 2.7E-40 T 29-03-2018 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 1.1E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 1.1E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 1.1E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS21395 1cc498ce28eface5e0de27293d703814 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 1.1E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS15700 b01c279f8eab434f5095cf197d70ac98 310 Pfam PF13533 Biotin-lipoyl like 48 94 3.0E-18 T 29-03-2018 CKQ55_RS15700 b01c279f8eab434f5095cf197d70ac98 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 291 2.0E-32 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS15700 b01c279f8eab434f5095cf197d70ac98 310 Gene3D G3DSA:1.20.1600.10 41 303 3.3E-17 T 29-03-2018 CKQ55_RS15700 b01c279f8eab434f5095cf197d70ac98 310 Pfam PF13437 HlyD family secretion protein 156 238 7.9E-9 T 29-03-2018 CKQ55_RS15700 b01c279f8eab434f5095cf197d70ac98 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 57.792 T 29-03-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CKQ55_RS15700 b01c279f8eab434f5095cf197d70ac98 310 SUPERFAMILY SSF111369 46 212 6.15E-22 T 29-03-2018 CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 Gene3D G3DSA:1.20.200.10 118 390 8.7E-84 T 29-03-2018 CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 Gene3D G3DSA:1.10.40.30 391 445 2.7E-31 T 29-03-2018 CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 4.7E-156 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 Gene3D G3DSA:1.10.275.10 1 117 6.2E-42 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 SUPERFAMILY SSF48557 10 454 9.9E-106 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 Pfam PF00206 Lyase 14 312 3.1E-82 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CKQ55_RS00520 918a32dcd8a945bcde66a50a5b7701f9 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 4.6E-52 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 Gene3D G3DSA:3.40.190.10 174 261 6.4E-19 T 29-03-2018 CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 SUPERFAMILY SSF53850 88 297 1.23E-38 T 29-03-2018 CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 Pfam PF03466 LysR substrate binding domain 88 292 1.4E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 SUPERFAMILY SSF46785 4 111 1.06E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 Gene3D G3DSA:1.10.10.10 3 84 1.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13410 5e863c1ae039121c970db0fecde2866b 304 Gene3D G3DSA:3.40.190.10 90 173 5.3E-10 T 29-03-2018 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 PRINTS PR00969 Pili chaperone signature 21 30 5.7E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 PRINTS PR00969 Pili chaperone signature 96 113 5.7E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 PRINTS PR00969 Pili chaperone signature 155 170 5.7E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 PRINTS PR00969 Pili chaperone signature 68 89 5.7E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 PRINTS PR00969 Pili chaperone signature 120 135 5.7E-35 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 Gene3D G3DSA:2.60.40.10 21 136 7.9E-38 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 138 7.2E-43 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 SUPERFAMILY SSF49584 132 217 2.22E-20 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 Gene3D G3DSA:2.60.40.10 140 219 2.0E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 SUPERFAMILY SSF49354 15 138 2.3E-43 T 29-03-2018 IPR008962 PapD-like CKQ55_RS19460 92345912c58161005e0cb1aa4d65c513 219 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 161 214 1.6E-11 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 237 1.1E-44 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.2E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.2E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 2.2E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 2.2E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.2E-12 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 Gene3D G3DSA:3.40.50.620 6 110 6.4E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 SUPERFAMILY SSF52374 6 288 1.58E-84 T 29-03-2018 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 Gene3D G3DSA:3.40.50.620 111 222 3.3E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 40.117 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CKQ55_RS07830 0ea9bf98c7c78933972861d60ab615a6 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 270 1.6E-110 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CKQ55_RS11510 7625bdfc031bb8d6a4c22f0eea330cc9 66 Pfam PF02597 ThiS family 5 66 4.1E-16 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CKQ55_RS11510 7625bdfc031bb8d6a4c22f0eea330cc9 66 SUPERFAMILY SSF54285 1 66 1.03E-18 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CKQ55_RS11510 7625bdfc031bb8d6a4c22f0eea330cc9 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 66 1.0E-20 T 29-03-2018 IPR010035 ThiS, thiamine-biosynthesis CKQ55_RS11510 7625bdfc031bb8d6a4c22f0eea330cc9 66 Gene3D G3DSA:3.10.20.30 1 66 1.3E-22 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS28935 3eb872f41cab41284b5681b7abccbaef 361 Pfam PF06996 Type VI secretion, TssG 20 320 7.9E-74 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CKQ55_RS28935 3eb872f41cab41284b5681b7abccbaef 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 320 2.6E-68 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 7.1E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 1.5E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 SUPERFAMILY SSF55604 401 474 1.15E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 Gene3D G3DSA:3.30.1360.60 399 474 1.1E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 9.6E-84 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 4.1E-90 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 2.4E-234 T 29-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 CKQ55_RS00735 8d2fae8c9ffd5bdf5a08aff9af9f0a0e 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 TIGRFAM TIGR02361 dak_ATP: dihydroxyacetone kinase 3 547 5.9E-184 T 29-03-2018 IPR012734 Dihydroxyacetone kinase GO:0004371|GO:0005524|GO:0006071 KEGG: 00051+2.7.1.28|KEGG: 00561+2.7.1.29|KEGG: 00680+2.7.1.29|MetaCyc: PWY-6131|Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 Pfam PF02733 Dak1 domain 32 324 1.6E-98 T 29-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 SUPERFAMILY SSF101473 353 548 1.31E-47 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 SMART SM01120 382 548 2.8E-46 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 Pfam PF02734 DAK2 domain 382 547 2.3E-37 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 Gene3D G3DSA:3.30.1180.20 186 335 5.1E-34 T 29-03-2018 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 Gene3D G3DSA:3.40.50.10440 12 185 1.1E-68 T 29-03-2018 CKQ55_RS16585 88f1bf939412b6946dfb6cf2b0b21dd8 549 SUPERFAMILY SSF82549 2 331 8.37E-106 T 29-03-2018 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Gene3D G3DSA:3.30.499.10 402 520 5.4E-10 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 SUPERFAMILY SSF53732 380 859 2.09E-149 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Gene3D G3DSA:3.20.19.10 162 363 4.3E-35 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.3E-98 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.6E-38 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Gene3D G3DSA:3.30.499.10 683 865 5.5E-54 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 SUPERFAMILY SSF74778 2 160 4.18E-70 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 SUPERFAMILY SSF52016 163 371 2.35E-72 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Gene3D G3DSA:3.40.1060.10 521 682 1.1E-25 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 8.6E-69 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 PIRSF PIRSF036687 1 859 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS07985 1fdf947e0b906cae7be1dc364cd6b376 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS28280 7f4108231fe4c6f77cb8e4baa22c32d7 136 SUPERFAMILY SSF51316 2 123 3.77E-32 T 29-03-2018 IPR011057 Mss4-like CKQ55_RS28280 7f4108231fe4c6f77cb8e4baa22c32d7 136 Gene3D G3DSA:3.90.1590.10 2 119 4.6E-21 T 29-03-2018 CKQ55_RS28280 7f4108231fe4c6f77cb8e4baa22c32d7 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 106 8.8E-9 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CKQ55_RS19655 aff6fcf478159359729adfcfac61b50c 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 1 244 2.0E-71 T 29-03-2018 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 SUPERFAMILY SSF100879 246 337 5.49E-7 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 SUPERFAMILY SSF56672 1 238 6.32E-65 T 29-03-2018 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Gene3D G3DSA:1.10.150.20 175 250 6.9E-16 T 29-03-2018 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Gene3D G3DSA:3.30.70.270 37 110 5.9E-17 T 29-03-2018 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Gene3D G3DSA:3.30.70.270 113 174 3.8E-8 T 29-03-2018 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Pfam PF13438 Domain of unknown function (DUF4113) 373 421 1.3E-21 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Gene3D G3DSA:3.30.1490.100 251 364 3.2E-25 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 354 9.5E-18 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30930 37b44df496eff13d03496ed6e91b075b 423 Pfam PF00817 impB/mucB/samB family 6 149 2.3E-34 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS04460 7ed01c0e12e60f025bbfc2ccbc9cdf12 329 Pfam PF01032 FecCD transport family 20 323 7.1E-83 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS04460 7ed01c0e12e60f025bbfc2ccbc9cdf12 329 Gene3D G3DSA:1.10.3470.10 2 329 5.5E-63 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS04460 7ed01c0e12e60f025bbfc2ccbc9cdf12 329 SUPERFAMILY SSF81345 5 323 6.54E-72 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS30280 9ee76de76ebaece69cbc6b78d1abba7e 208 Gene3D G3DSA:3.40.50.300 1 61 1.1E-6 T 29-03-2018 CKQ55_RS30280 9ee76de76ebaece69cbc6b78d1abba7e 208 Gene3D G3DSA:3.40.50.300 62 207 6.5E-12 T 29-03-2018 CKQ55_RS30280 9ee76de76ebaece69cbc6b78d1abba7e 208 SUPERFAMILY SSF52540 1 202 9.15E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30280 9ee76de76ebaece69cbc6b78d1abba7e 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 181 8.8E-8 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 Gene3D G3DSA:1.10.10.10 322 413 2.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 2.2E-61 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 PIRSF PIRSF000774 1 477 7.2E-151 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 PRINTS PR00045 Sigma-54 factor signature 376 388 3.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 PRINTS PR00045 Sigma-54 factor signature 450 468 3.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 PRINTS PR00045 Sigma-54 factor signature 186 203 3.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 PRINTS PR00045 Sigma-54 factor signature 392 403 3.0E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 7.0E-162 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.6E-15 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS15915 e61a6e979116002106bf75a21be19660 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.2E-70 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 Gene3D G3DSA:3.40.50.920 178 303 3.2E-20 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 SMART SM00861 2 166 2.8E-41 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 ProSitePatterns PS00802 Transketolase signature 2. 109 125 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 SUPERFAMILY SSF52922 183 302 2.88E-17 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 Pfam PF02779 Transketolase, pyrimidine binding domain 5 162 1.6E-28 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 SUPERFAMILY SSF52518 3 167 4.1E-45 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 Pfam PF02780 Transketolase, C-terminal domain 181 296 1.6E-13 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS02170 b0f4e08f280a7511e6abaed6f5a687da 303 Gene3D G3DSA:3.40.50.970 1 171 1.4E-39 T 29-03-2018 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 Pfam PF02311 AraC-like ligand binding domain 16 131 2.2E-22 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 SUPERFAMILY SSF51215 11 153 9.29E-25 T 29-03-2018 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 Gene3D G3DSA:3.90.1240.10 102 278 2.0E-28 T 29-03-2018 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 Gene3D G3DSA:2.60.120.10 4 101 2.1E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 Pfam PF12833 Helix-turn-helix domain 191 269 2.5E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 SUPERFAMILY SSF46689 169 219 4.75E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 SMART SM00342 185 268 1.9E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01655 a53f52ad2f1cf88ef16237a13928e033 279 SUPERFAMILY SSF46689 221 272 2.2E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS09815 8511ad42616f1dcc7aa7391ddea98d08 144 Gene3D G3DSA:3.30.420.10 73 144 4.2E-6 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS09815 8511ad42616f1dcc7aa7391ddea98d08 144 SUPERFAMILY SSF53098 72 143 9.61E-11 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS09815 8511ad42616f1dcc7aa7391ddea98d08 144 Pfam PF13276 HTH-like domain 11 62 6.6E-10 T 29-03-2018 IPR025948 HTH-like domain CKQ55_RS28275 269178b99136555be578b2551dedc32d 201 Pfam PF02525 Flavodoxin-like fold 3 195 6.8E-46 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS28275 269178b99136555be578b2551dedc32d 201 Gene3D G3DSA:3.40.50.360 2 201 4.7E-40 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS28275 269178b99136555be578b2551dedc32d 201 SUPERFAMILY SSF52218 1 199 2.18E-58 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS28275 269178b99136555be578b2551dedc32d 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.709 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CKQ55_RS28525 184de53ec9b95f8d53fe1f675133e403 271 SUPERFAMILY SSF51197 9 270 2.38E-54 T 29-03-2018 CKQ55_RS28525 184de53ec9b95f8d53fe1f675133e403 271 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 17 226 1.4E-25 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CKQ55_RS28525 184de53ec9b95f8d53fe1f675133e403 271 Gene3D G3DSA:2.60.120.620 2 243 3.8E-35 T 29-03-2018 CKQ55_RS05495 15a8eaf9cde8e573810b365c9bd031e6 466 Pfam PF04466 Phage terminase large subunit 24 213 7.8E-40 T 29-03-2018 IPR035412 Phage terminase large subunit, N-terminal CKQ55_RS05495 15a8eaf9cde8e573810b365c9bd031e6 466 Pfam PF17288 Terminase RNAseH like domain 351 451 2.8E-7 T 29-03-2018 IPR035413 Phage terminase large subunit, C-terminal CKQ55_RS05495 15a8eaf9cde8e573810b365c9bd031e6 466 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 25 255 3.4E-42 T 29-03-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 CKQ55_RS18555 4f313e17555b235860a00f5a4ce0bd05 452 Gene3D G3DSA:1.20.1250.20 225 448 1.2E-25 T 29-03-2018 CKQ55_RS18555 4f313e17555b235860a00f5a4ce0bd05 452 Pfam PF07690 Major Facilitator Superfamily 25 318 3.5E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS18555 4f313e17555b235860a00f5a4ce0bd05 452 SUPERFAMILY SSF103473 13 444 7.06E-80 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18555 4f313e17555b235860a00f5a4ce0bd05 452 PIRSF PIRSF002808 3 450 5.9E-42 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS18555 4f313e17555b235860a00f5a4ce0bd05 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 3.3E-161 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS18555 4f313e17555b235860a00f5a4ce0bd05 452 Gene3D G3DSA:1.20.1250.20 11 216 3.4E-36 T 29-03-2018 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 5.2E-123 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.8E-217 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS17635 b592c93a64cf41b45b334aaf4d4d7d66 430 Pfam PF02040 Arsenical pump membrane protein 3 423 4.6E-158 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 SUPERFAMILY SSF51905 7 107 9.18E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 SUPERFAMILY SSF51905 225 352 9.18E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 8.2E-68 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 Gene3D G3DSA:3.50.50.60 144 348 1.7E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 8.8E-15 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 8.8E-15 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.8E-15 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 8.8E-15 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.6E-8 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.6E-8 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.6E-8 T 29-03-2018 CKQ55_RS00685 eed0413162603453bbacd3d39f3457da 434 Gene3D G3DSA:3.50.50.60 5 143 6.7E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Pfam PF01011 PQQ enzyme repeat 721 758 4.0E-7 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Pfam PF01011 PQQ enzyme repeat 289 320 1.5E-5 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Pfam PF01011 PQQ enzyme repeat 442 468 1.3E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Pfam PF01011 PQQ enzyme repeat 664 696 2.5E-7 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Pfam PF01011 PQQ enzyme repeat 358 387 4.3E-5 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Pfam PF01011 PQQ enzyme repeat 225 260 5.9E-9 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 29-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SUPERFAMILY SSF50998 163 521 6.67E-161 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SUPERFAMILY SSF50998 557 792 6.67E-161 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Gene3D G3DSA:2.140.10.10 654 791 3.9E-14 T 29-03-2018 CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 Gene3D G3DSA:2.140.10.10 159 607 6.2E-88 T 29-03-2018 CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SMART SM00564 715 748 0.001 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SMART SM00564 401 458 310.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SMART SM00564 479 512 790.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SMART SM00564 282 314 49.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SMART SM00564 339 380 0.012 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS07925 3654de4ca8f8b5e3dd512ca032bf30ed 796 SMART SM00564 220 251 6.4E-7 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 PIRSF PIRSF006076 1 807 1.7E-243 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Gene3D G3DSA:3.10.20.310 19 91 1.4E-9 T 29-03-2018 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Gene3D G3DSA:3.10.20.310 92 173 2.7E-15 T 29-03-2018 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 807 24.745 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Pfam PF07244 Surface antigen variable number repeat 347 421 2.2E-13 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Pfam PF07244 Surface antigen variable number repeat 92 172 3.6E-13 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Pfam PF07244 Surface antigen variable number repeat 267 344 4.8E-5 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Pfam PF07244 Surface antigen variable number repeat 176 263 3.3E-15 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 807 8.3E-273 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Gene3D G3DSA:3.10.20.310 266 346 7.8E-8 T 29-03-2018 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Pfam PF01103 Surface antigen 448 807 3.0E-92 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Gene3D G3DSA:3.10.20.310 174 265 2.9E-21 T 29-03-2018 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Gene3D G3DSA:2.40.160.50 387 807 1.6E-82 T 29-03-2018 CKQ55_RS11045 a482b30baf751dbc0989e767bc017f4d 807 Gene3D G3DSA:3.10.20.310 350 386 0.01 T 29-03-2018 CKQ55_RS07020 34b59bf008cc46ff3cc1da3f2b57cbc0 365 SUPERFAMILY SSF52540 1 239 3.28E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07020 34b59bf008cc46ff3cc1da3f2b57cbc0 365 Pfam PF00005 ABC transporter 19 163 3.7E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS07020 34b59bf008cc46ff3cc1da3f2b57cbc0 365 SMART SM00382 27 212 5.5E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS07020 34b59bf008cc46ff3cc1da3f2b57cbc0 365 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS07020 34b59bf008cc46ff3cc1da3f2b57cbc0 365 Gene3D G3DSA:3.40.50.300 1 288 3.2E-68 T 29-03-2018 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 1.6E-47 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 SUPERFAMILY SSF52518 9 188 9.9E-61 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 Gene3D G3DSA:3.40.50.970 6 198 2.7E-63 T 29-03-2018 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 8.3E-202 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 1.3E-44 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 181 1.3E-58 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 SUPERFAMILY SSF52467 165 362 3.76E-57 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 Gene3D G3DSA:3.40.50.1220 199 348 6.0E-52 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 Gene3D G3DSA:3.40.50.970 349 551 1.2E-52 T 29-03-2018 CKQ55_RS13225 f3f182ec1c780fcb9cf2d94e6055c8d0 562 SUPERFAMILY SSF52518 366 560 2.08E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 SUPERFAMILY SSF56214 103 206 8.37E-13 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 Gene3D G3DSA:3.90.470.20 114 202 7.4E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 103 205 3.2E-12 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 Gene3D G3DSA:3.90.470.20 24 113 6.1E-14 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 PRINTS PR01399 Enterobactin synthetase component D signature 146 162 1.3E-19 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 PRINTS PR01399 Enterobactin synthetase component D signature 73 91 1.3E-19 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CKQ55_RS04495 71b050a89e6d1775179a53f46e7799ad 207 PRINTS PR01399 Enterobactin synthetase component D signature 44 64 1.3E-19 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CKQ55_RS22935 60198ff274ae04c5eaa0ba30324aadba 246 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 245 8.0E-73 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS22935 60198ff274ae04c5eaa0ba30324aadba 246 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 246 47.171 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS22935 60198ff274ae04c5eaa0ba30324aadba 246 Pfam PF02654 Cobalamin-5-phosphate synthase 8 243 2.8E-54 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Gene3D G3DSA:3.50.50.60 341 442 1.6E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 2.9E-38 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.9E-38 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 2.9E-38 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 2.9E-38 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 2.9E-38 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Gene3D G3DSA:3.40.30.10 1 94 5.5E-28 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PIRSF PIRSF000238 1 521 2.6E-261 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 7.0E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Gene3D G3DSA:3.50.50.60 196 227 1.9E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 SUPERFAMILY SSF51905 206 507 1.3E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Gene3D G3DSA:3.50.50.60 443 520 2.0E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 SUPERFAMILY SSF52833 1 101 7.94E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 8.3E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Gene3D G3DSA:3.50.50.60 228 340 5.3E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Pfam PF13192 Thioredoxin domain 126 194 1.3E-8 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 SUPERFAMILY SSF52833 106 197 5.27E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 Gene3D G3DSA:3.40.30.10 103 195 5.8E-8 T 29-03-2018 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 2.2E-238 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CKQ55_RS04225 3b9249299ef3d538f2e9c3f45ad77b7e 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CKQ55_RS15840 a891d8a8c812f5dd3962f7b22f23d3cc 229 Gene3D G3DSA:3.20.20.70 1 229 2.4E-40 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15840 a891d8a8c812f5dd3962f7b22f23d3cc 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.783 T 29-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CKQ55_RS15840 a891d8a8c812f5dd3962f7b22f23d3cc 229 SUPERFAMILY SSF51366 14 224 1.37E-52 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS15840 a891d8a8c812f5dd3962f7b22f23d3cc 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 225 8.8E-85 T 29-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CKQ55_RS09465 d3ddfec5c9bcc768ca3dbdc31d29879b 259 SUPERFAMILY SSF53254 29 249 5.89E-41 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS09465 d3ddfec5c9bcc768ca3dbdc31d29879b 259 Gene3D G3DSA:3.40.50.1240 15 258 2.5E-41 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS09465 d3ddfec5c9bcc768ca3dbdc31d29879b 259 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 30 128 6.0E-23 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS09465 d3ddfec5c9bcc768ca3dbdc31d29879b 259 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 154 241 1.1E-6 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS09465 d3ddfec5c9bcc768ca3dbdc31d29879b 259 SMART SM00855 29 209 4.3E-11 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 SMART SM01350 179 467 1.5E-220 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 Gene3D G3DSA:1.10.1040.10 181 434 2.3E-110 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 PIRSF PIRSF000109 1 468 5.6E-241 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 SUPERFAMILY SSF51735 4 173 1.36E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 SUPERFAMILY SSF48179 177 467 6.8E-130 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 1.1E-133 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 Gene3D G3DSA:3.40.50.720 1 180 3.7E-35 T 29-03-2018 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 4.7E-229 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 1.7E-51 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 29-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CKQ55_RS22660 f47a435cd74a1ced695e4cfbbfc84f18 468 Gene3D G3DSA:1.20.5.320 435 468 7.6E-22 T 29-03-2018 CKQ55_RS06560 0493c6618138c526ab246efd2fdfa7f0 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 144 4.2E-50 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CKQ55_RS06560 0493c6618138c526ab246efd2fdfa7f0 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.788 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CKQ55_RS13625 f23a88a5b49a1546c1bc8a188f33090d 248 Gene3D G3DSA:2.40.30.10 1 96 2.3E-18 T 29-03-2018 CKQ55_RS13625 f23a88a5b49a1546c1bc8a188f33090d 248 SUPERFAMILY SSF52343 104 248 8.51E-37 T 29-03-2018 CKQ55_RS13625 f23a88a5b49a1546c1bc8a188f33090d 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 1.2E-6 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CKQ55_RS13625 f23a88a5b49a1546c1bc8a188f33090d 248 SUPERFAMILY SSF63380 3 100 3.76E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS13625 f23a88a5b49a1546c1bc8a188f33090d 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.5E-18 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS13625 f23a88a5b49a1546c1bc8a188f33090d 248 Gene3D G3DSA:3.40.50.80 97 248 5.5E-24 T 29-03-2018 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 1.4E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Pfam PF01565 FAD binding domain 52 192 4.5E-36 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Gene3D G3DSA:3.30.43.10 4 104 1.0E-16 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 SUPERFAMILY SSF56176 250 282 2.52E-52 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 SUPERFAMILY SSF56176 21 192 2.52E-52 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Gene3D G3DSA:3.30.465.10 105 304 7.7E-43 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Gene3D G3DSA:1.10.1060.10 546 703 1.7E-11 T 29-03-2018 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Gene3D G3DSA:1.10.45.10 526 543 4.0E-6 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 SUPERFAMILY SSF55103 257 542 7.36E-53 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 SUPERFAMILY SSF46548 655 691 3.14E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 SUPERFAMILY SSF46548 517 622 3.14E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.3E-61 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CKQ55_RS24870 262e393460af0ec115e34a0f333d0c14 1018 Gene3D G3DSA:1.10.45.10 473 525 4.0E-9 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 SUPERFAMILY SSF49354 20 151 2.33E-38 T 29-03-2018 IPR008962 PapD-like CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 230 8.1E-15 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 151 2.6E-36 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 SUPERFAMILY SSF49584 153 233 3.01E-24 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 Gene3D G3DSA:2.60.40.10 26 149 3.2E-33 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 Gene3D G3DSA:2.60.40.10 153 236 1.7E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 PRINTS PR00969 Pili chaperone signature 133 148 3.3E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 PRINTS PR00969 Pili chaperone signature 80 101 3.3E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 PRINTS PR00969 Pili chaperone signature 108 125 3.3E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 PRINTS PR00969 Pili chaperone signature 168 183 3.3E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12465 b45e3f1b9a2de5d89c9a255e713291bd 237 PRINTS PR00969 Pili chaperone signature 26 35 3.3E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 Gene3D G3DSA:1.10.10.10 2 80 2.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 SUPERFAMILY SSF46785 3 88 5.44E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 Gene3D G3DSA:3.40.190.10 81 179 4.2E-16 T 29-03-2018 CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 Gene3D G3DSA:3.40.190.10 180 266 1.7E-20 T 29-03-2018 CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 SUPERFAMILY SSF53850 88 298 2.17E-39 T 29-03-2018 CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 Pfam PF03466 LysR substrate binding domain 88 294 2.2E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS00985 018e49de4832628f78c7325ec57f7eaa 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 PIRSF PIRSF002741 21 517 1.8E-84 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 Gene3D G3DSA:3.90.76.10 33 177 2.0E-31 T 29-03-2018 CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 431 1.2E-85 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 SUPERFAMILY SSF53850 25 514 1.48E-122 T 29-03-2018 CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 Gene3D G3DSA:3.10.105.10 276 491 5.8E-46 T 29-03-2018 CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 518 9.0E-237 T 29-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 CKQ55_RS14550 396e15de470a3193087b8b40c58594b5 522 Gene3D G3DSA:3.40.190.10 178 275 1.7E-23 T 29-03-2018 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 Gene3D G3DSA:1.10.10.60 205 251 3.1E-8 T 29-03-2018 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 SUPERFAMILY SSF46689 203 248 4.93E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 Pfam PF02311 AraC-like ligand binding domain 28 135 1.3E-5 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 Gene3D G3DSA:2.60.120.10 7 108 5.3E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 Pfam PF12833 Helix-turn-helix domain 173 249 3.9E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 SUPERFAMILY SSF46689 167 202 3.52E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 Gene3D G3DSA:1.10.10.60 109 204 4.1E-11 T 29-03-2018 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 SMART SM00342 167 249 3.1E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS24190 06b519d822cd6e9396a6b2c57ad21835 251 SUPERFAMILY SSF51182 20 132 1.87E-8 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS16575 c150a6ab15c42b61362d56139f01ccd8 257 Pfam PF04954 Siderophore-interacting protein 142 256 1.8E-17 T 29-03-2018 IPR007037 Siderophore-interacting protein CKQ55_RS16575 c150a6ab15c42b61362d56139f01ccd8 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 24 134 2.9E-29 T 29-03-2018 IPR013113 FAD-binding 9, siderophore-interacting CKQ55_RS16575 c150a6ab15c42b61362d56139f01ccd8 257 Gene3D G3DSA:3.40.50.80 135 257 3.1E-21 T 29-03-2018 CKQ55_RS16575 c150a6ab15c42b61362d56139f01ccd8 257 Gene3D G3DSA:2.40.30.10 12 134 1.7E-25 T 29-03-2018 CKQ55_RS16575 c150a6ab15c42b61362d56139f01ccd8 257 SUPERFAMILY SSF63380 5 139 2.38E-14 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS18180 bae6363cb161b6148ae359aaa2b82530 150 Gene3D G3DSA:3.40.50.300 1 145 2.1E-14 T 29-03-2018 CKQ55_RS18180 bae6363cb161b6148ae359aaa2b82530 150 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 142 8.0E-61 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CKQ55_RS18180 bae6363cb161b6148ae359aaa2b82530 150 PIRSF PIRSF036409 1 146 1.9E-59 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CKQ55_RS18180 bae6363cb161b6148ae359aaa2b82530 150 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 141 4.6E-58 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CKQ55_RS18180 bae6363cb161b6148ae359aaa2b82530 150 SUPERFAMILY SSF52540 3 141 1.27E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 SUPERFAMILY SSF46785 5 114 1.18E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 6.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 Gene3D G3DSA:3.40.190.10 92 183 8.7E-18 T 29-03-2018 CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 Gene3D G3DSA:3.40.190.10 184 269 2.8E-16 T 29-03-2018 CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 Gene3D G3DSA:1.10.10.10 1 87 2.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 Pfam PF03466 LysR substrate binding domain 91 296 4.8E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS25955 a524ba3dd1b46b2eddc068c0aa02e236 302 SUPERFAMILY SSF53850 92 300 1.47E-37 T 29-03-2018 CKQ55_RS18320 bd1ea0e41efcaaeb3b5c51f75ba2192d 201 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 185 1.4E-28 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18320 bd1ea0e41efcaaeb3b5c51f75ba2192d 201 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 191 9.7E-60 T 29-03-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CKQ55_RS18320 bd1ea0e41efcaaeb3b5c51f75ba2192d 201 Gene3D G3DSA:3.40.1010.10 1 110 7.3E-20 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18320 bd1ea0e41efcaaeb3b5c51f75ba2192d 201 SUPERFAMILY SSF53790 1 198 1.96E-41 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18320 bd1ea0e41efcaaeb3b5c51f75ba2192d 201 Gene3D G3DSA:3.30.950.10 111 201 2.2E-21 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 Pfam PF00005 ABC transporter 21 169 1.6E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.3E-202 T 29-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 Gene3D G3DSA:3.40.50.300 1 252 3.2E-77 T 29-03-2018 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 Gene3D G3DSA:3.30.70.260 253 343 8.9E-26 T 29-03-2018 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 SMART SM00382 30 217 9.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 SUPERFAMILY SSF55021 248 343 6.52E-26 T 29-03-2018 CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 SUPERFAMILY SSF52540 1 240 4.61E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 Pfam PF09383 NIL domain 268 339 2.0E-19 T 29-03-2018 IPR018449 NIL domain CKQ55_RS07450 e7b77ed9d3554bf41c56e6e04fc17985 343 SMART SM00930 265 340 2.1E-24 T 29-03-2018 IPR018449 NIL domain CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.6E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 1.6E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.6E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.6E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82714 186 267 3.27E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82714 722 806 4.05E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Gene3D G3DSA:3.30.70.1430 44 138 5.2E-19 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Gene3D G3DSA:3.30.2090.10 722 808 4.7E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Gene3D G3DSA:1.20.1640.10 286 515 3.0E-45 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82693 45 126 8.11E-20 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82866 293 504 2.75E-40 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Gene3D G3DSA:3.30.70.1430 566 664 1.7E-8 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82693 137 184 3.14E-22 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82693 270 327 3.14E-22 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Gene3D G3DSA:3.30.2090.10 183 270 1.6E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Gene3D G3DSA:1.20.1640.10 825 1036 3.6E-33 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 SUPERFAMILY SSF82866 805 1036 6.15E-48 T 29-03-2018 CKQ55_RS26595 6a1c942f605015c6f92f7f7eab7c2405 1037 Pfam PF00873 AcrB/AcrD/AcrF family 6 1032 2.7E-242 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS11315 7c1739467705c85cf2e8ef2fbcd02e25 135 SUPERFAMILY SSF53062 1 125 2.88E-28 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS11315 7c1739467705c85cf2e8ef2fbcd02e25 135 Pfam PF03610 PTS system fructose IIA component 4 113 1.0E-16 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS11315 7c1739467705c85cf2e8ef2fbcd02e25 135 Gene3D G3DSA:3.40.50.510 1 134 4.4E-26 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS11315 7c1739467705c85cf2e8ef2fbcd02e25 135 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 1.4E-44 T 29-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CKQ55_RS24455 7ece26aa2f1c025e09af3667d6492a73 76 Pfam PF06150 ChaB 9 75 5.5E-27 T 29-03-2018 IPR009317 ChaB CKQ55_RS24455 7ece26aa2f1c025e09af3667d6492a73 76 SUPERFAMILY SSF140376 2 75 3.4E-28 T 29-03-2018 CKQ55_RS09980 577109c1211566aa7beaf442c2d6fa64 273 SUPERFAMILY SSF51658 4 268 4.71E-61 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS09980 577109c1211566aa7beaf442c2d6fa64 273 Gene3D G3DSA:3.20.20.150 1 270 4.9E-31 T 29-03-2018 CKQ55_RS09980 577109c1211566aa7beaf442c2d6fa64 273 Pfam PF01261 Xylose isomerase-like TIM barrel 24 201 1.6E-12 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS09980 577109c1211566aa7beaf442c2d6fa64 273 PIRSF PIRSF036778 1 273 1.7E-93 T 29-03-2018 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 Pfam PF00005 ABC transporter 18 164 2.9E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 SUPERFAMILY SSF52540 3 244 1.1E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 Gene3D G3DSA:3.40.50.300 1 256 1.6E-75 T 29-03-2018 CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 Pfam PF12857 TOBE-like domain 289 338 1.8E-6 T 29-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 7.0E-127 T 29-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 SUPERFAMILY SSF50331 239 346 1.13E-13 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS20595 13097a3677aaac9e6b31081d3f866759 364 SMART SM00382 27 214 3.6E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 Gene3D G3DSA:3.40.190.10 176 260 5.4E-18 T 29-03-2018 CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 Pfam PF03466 LysR substrate binding domain 88 289 5.4E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 Gene3D G3DSA:1.10.10.10 1 91 4.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 Gene3D G3DSA:3.40.190.10 92 175 6.5E-25 T 29-03-2018 CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 SUPERFAMILY SSF46785 3 110 8.59E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 SUPERFAMILY SSF53850 90 290 1.5E-43 T 29-03-2018 CKQ55_RS20800 87f727f096fea4291a895ed7dae5a869 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-24 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21020 6809462d2f2cc8e596c45ef58ddbcca8 214 SUPERFAMILY SSF52833 14 87 1.4E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS21020 6809462d2f2cc8e596c45ef58ddbcca8 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 9.9E-68 T 29-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CKQ55_RS21020 6809462d2f2cc8e596c45ef58ddbcca8 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 2.9E-11 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS21020 6809462d2f2cc8e596c45ef58ddbcca8 214 SUPERFAMILY SSF47616 90 207 1.86E-9 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS21020 6809462d2f2cc8e596c45ef58ddbcca8 214 Gene3D G3DSA:3.40.30.10 1 103 2.6E-22 T 29-03-2018 CKQ55_RS21020 6809462d2f2cc8e596c45ef58ddbcca8 214 Gene3D G3DSA:1.20.1050.10 104 207 4.5E-14 T 29-03-2018 CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 SMART SM00829 15 355 2.4E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 148 1.5E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 Gene3D G3DSA:3.90.180.10 8 174 1.3E-42 T 29-03-2018 CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 SUPERFAMILY SSF51735 157 317 5.96E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 Pfam PF00107 Zinc-binding dehydrogenase 191 315 2.3E-21 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 Gene3D G3DSA:3.40.50.10730 175 297 1.7E-25 T 29-03-2018 CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 SUPERFAMILY SSF50129 4 190 1.07E-44 T 29-03-2018 IPR011032 GroES-like CKQ55_RS03880 592b43af791fcb9e9d49263b707e81e1 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 Gene3D G3DSA:3.40.1380.20 322 470 1.0E-44 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.5E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 Gene3D G3DSA:3.20.20.60 1 77 2.4E-18 T 29-03-2018 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 Gene3D G3DSA:3.20.20.60 167 321 2.5E-63 T 29-03-2018 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 6.8E-28 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.1E-190 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 SUPERFAMILY SSF52935 323 469 2.62E-35 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 5.5E-152 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 SUPERFAMILY SSF51621 1 74 4.54E-100 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 SUPERFAMILY SSF51621 156 339 4.54E-100 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 SUPERFAMILY SSF50800 70 166 1.74E-29 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CKQ55_RS24960 472a45516d132910b779cc6271e41e3b 470 Gene3D G3DSA:2.40.33.10 78 166 8.2E-32 T 29-03-2018 CKQ55_RS27805 3ce0737b828728c201903e700ea4c1e4 460 Pfam PF13347 MFS/sugar transport protein 14 431 6.2E-91 T 29-03-2018 CKQ55_RS27805 3ce0737b828728c201903e700ea4c1e4 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 441 1.5E-123 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS27805 3ce0737b828728c201903e700ea4c1e4 460 Gene3D G3DSA:1.20.1250.20 5 219 1.1E-16 T 29-03-2018 CKQ55_RS27805 3ce0737b828728c201903e700ea4c1e4 460 Gene3D G3DSA:1.20.1250.20 220 435 1.6E-13 T 29-03-2018 CKQ55_RS27805 3ce0737b828728c201903e700ea4c1e4 460 SUPERFAMILY SSF103473 9 429 3.14E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.9E-69 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 SUPERFAMILY SSF52218 1 168 3.73E-46 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 Gene3D G3DSA:3.40.50.360 1 73 3.5E-13 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 Gene3D G3DSA:3.40.50.360 74 173 6.8E-18 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 Pfam PF00258 Flavodoxin 5 160 1.1E-25 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 PIRSF PIRSF038996 1 172 4.4E-56 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CKQ55_RS17450 b78b03e579fbd21cc823f0e75b22749b 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 PRINTS PR00189 Transthyretin signature 3 23 6.5E-5 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 PRINTS PR00189 Transthyretin signature 86 108 6.5E-5 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 29-03-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 Pfam PF00576 HIUase/Transthyretin family 4 107 4.0E-26 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 108 7.7E-28 T 29-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 SUPERFAMILY SSF49472 1 108 3.53E-30 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS01355 f9c17d69831458e3263184d6c10704c1 108 Gene3D G3DSA:2.60.40.180 1 108 1.9E-31 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS29015 16b7bb5cef0a311ff9676d8068c0fe72 187 Gene3D G3DSA:3.40.50.880 1 187 1.1E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29015 16b7bb5cef0a311ff9676d8068c0fe72 187 SUPERFAMILY SSF52317 2 186 6.07E-51 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29015 16b7bb5cef0a311ff9676d8068c0fe72 187 Pfam PF01965 DJ-1/PfpI family 3 184 5.8E-50 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS29015 16b7bb5cef0a311ff9676d8068c0fe72 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 187 2.4E-54 T 29-03-2018 IPR006286 Peptidase C56, PfpI CKQ55_RS09280 7c17b9dd10ee4989a7bda3aab5322abf 100 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 39 93 1.1E-15 T 29-03-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 Gene3D G3DSA:3.90.780.10 363 549 2.9E-49 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 3.0E-33 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 SUPERFAMILY SSF56300 27 360 2.37E-94 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 PRINTS PR01607 Apyrase family signature 32 50 9.1E-64 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 PRINTS PR01607 Apyrase family signature 207 224 9.1E-64 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 PRINTS PR01607 Apyrase family signature 283 303 9.1E-64 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 PRINTS PR01607 Apyrase family signature 484 503 9.1E-64 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 PRINTS PR01607 Apyrase family signature 238 261 9.1E-64 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 PRINTS PR01607 Apyrase family signature 417 440 9.1E-64 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 Gene3D G3DSA:3.60.21.10 26 362 7.9E-82 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 3.3E-17 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS05870 7b882051df60e900f1fd9b2bddafd827 550 SUPERFAMILY SSF55816 363 543 3.4E-54 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.366 T 29-03-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 SUPERFAMILY SSF56801 205 713 1.3E-95 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Gene3D G3DSA:3.40.50.980 376 525 2.5E-44 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Pfam PF00501 AMP-binding enzyme 233 619 1.6E-67 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Gene3D G3DSA:3.40.50.980 210 375 5.2E-21 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Pfam PF01553 Acyltransferase 17 137 2.0E-16 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 SUPERFAMILY SSF69593 6 170 1.19E-18 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Gene3D G3DSA:3.30.300.30 613 717 3.6E-9 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Gene3D G3DSA:3.40.1130.10 3 209 9.5E-24 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 Gene3D G3DSA:2.30.38.10 526 612 2.2E-14 T 29-03-2018 CKQ55_RS18050 4b31cf36e2e35c7f15e2117c362000f0 719 SMART SM00563 30 140 2.4E-25 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS20465 d85e5091aec0aca668779ed96618a6cc 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 143 3.7E-52 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CKQ55_RS20465 d85e5091aec0aca668779ed96618a6cc 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 7.8E-30 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CKQ55_RS20465 d85e5091aec0aca668779ed96618a6cc 159 Gene3D G3DSA:3.40.50.300 2 157 6.1E-17 T 29-03-2018 CKQ55_RS20465 d85e5091aec0aca668779ed96618a6cc 159 PIRSF PIRSF036409 1 148 7.2E-54 T 29-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CKQ55_RS20465 d85e5091aec0aca668779ed96618a6cc 159 SUPERFAMILY SSF52540 3 147 1.29E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25405 ede872718895e7f7f1bbd7ad812ccd0c 182 SUPERFAMILY SSF56349 4 181 2.38E-39 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS25405 ede872718895e7f7f1bbd7ad812ccd0c 182 Pfam PF00589 Phage integrase family 5 175 1.7E-41 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS25405 ede872718895e7f7f1bbd7ad812ccd0c 182 Gene3D G3DSA:1.10.443.10 5 181 4.2E-36 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS01290 649e2340454d83a0b3b10fe20a869e52 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 213 4.0E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01290 649e2340454d83a0b3b10fe20a869e52 219 SUPERFAMILY SSF161098 14 205 9.03E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01290 649e2340454d83a0b3b10fe20a869e52 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 106 2.2E-24 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS01290 649e2340454d83a0b3b10fe20a869e52 219 Gene3D G3DSA:1.10.3720.10 2 219 3.8E-35 T 29-03-2018 CKQ55_RS12785 3ec4907cb7d7835d87a0b26bc134bc66 328 SUPERFAMILY SSF56112 6 327 2.92E-82 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS12785 3ec4907cb7d7835d87a0b26bc134bc66 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.222 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CKQ55_RS12785 3ec4907cb7d7835d87a0b26bc134bc66 328 Pfam PF01636 Phosphotransferase enzyme family 32 256 5.3E-42 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CKQ55_RS12785 3ec4907cb7d7835d87a0b26bc134bc66 328 Gene3D G3DSA:3.90.1200.10 111 322 3.1E-18 T 29-03-2018 CKQ55_RS12785 3ec4907cb7d7835d87a0b26bc134bc66 328 Gene3D G3DSA:3.30.200.20 5 107 5.5E-18 T 29-03-2018 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 502 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 483 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 SUPERFAMILY SSF158472 232 280 1.7E-9 T 29-03-2018 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 Gene3D G3DSA:3.30.565.10 352 507 6.5E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 SMART SM00304 231 283 1.1E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 SMART SM00388 284 348 2.5E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 504 2.4E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 Gene3D G3DSA:1.10.287.130 274 343 1.1E-12 T 29-03-2018 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 Pfam PF00672 HAMP domain 232 280 1.6E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 SUPERFAMILY SSF47384 267 348 5.1E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 SUPERFAMILY SSF55874 337 503 6.02E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 SMART SM00387 393 505 9.2E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22425 193fb2d1f9b1ce09c5a7f09e4bd97b9e 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 348 3.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS16750 d285b8bcc81adb48819eeb2d0306ad9d 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.689 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS16750 d285b8bcc81adb48819eeb2d0306ad9d 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.3E-83 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS16750 d285b8bcc81adb48819eeb2d0306ad9d 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.2E-84 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS16750 d285b8bcc81adb48819eeb2d0306ad9d 217 SUPERFAMILY SSF55821 7 213 5.72E-87 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS16750 d285b8bcc81adb48819eeb2d0306ad9d 217 Gene3D G3DSA:3.90.870.10 3 217 4.4E-94 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 SUPERFAMILY SSF52440 1 113 1.15E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 SMART SM00878 336 441 4.0E-65 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 Gene3D G3DSA:3.30.470.20 211 444 6.1E-96 T 29-03-2018 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.2E-44 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 4.7E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 6.5E-85 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 7.9E-250 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 SUPERFAMILY SSF56059 83 347 5.13E-68 T 29-03-2018 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 SUPERFAMILY SSF51246 331 444 5.23E-44 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 Gene3D G3DSA:3.40.50.20 1 123 1.2E-51 T 29-03-2018 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS15610 733e7d9cb03ac9897a2378b57c475903 449 Gene3D G3DSA:3.30.1490.20 124 210 1.3E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS29210 91071dcc2147b13df5762e7f391df828 331 Pfam PF13379 NMT1-like family 20 253 6.7E-30 T 29-03-2018 CKQ55_RS29210 91071dcc2147b13df5762e7f391df828 331 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 26 324 7.2E-50 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CKQ55_RS29210 91071dcc2147b13df5762e7f391df828 331 SUPERFAMILY SSF53850 23 249 1.63E-47 T 29-03-2018 CKQ55_RS29210 91071dcc2147b13df5762e7f391df828 331 Gene3D G3DSA:3.40.190.10 128 328 1.2E-31 T 29-03-2018 CKQ55_RS29210 91071dcc2147b13df5762e7f391df828 331 SMART SM00062 25 248 0.0017 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS29210 91071dcc2147b13df5762e7f391df828 331 Gene3D G3DSA:3.40.190.10 20 127 2.8E-17 T 29-03-2018 CKQ55_RS03165 bd21f6a910c329729745a8926b222095 88 SUPERFAMILY SSF57716 38 73 8.55E-8 T 29-03-2018 CKQ55_RS03165 bd21f6a910c329729745a8926b222095 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 2.4E-14 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CKQ55_RS03165 bd21f6a910c329729745a8926b222095 88 Gene3D G3DSA:3.30.60.20 37 63 5.0E-5 T 29-03-2018 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 634 1.0E-269 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Gene3D G3DSA:2.60.40.1180 573 657 1.5E-7 T 29-03-2018 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 SMART SM00642 163 558 3.3E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Pfam PF00128 Alpha amylase, catalytic domain 305 521 1.8E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Pfam PF00128 Alpha amylase, catalytic domain 185 269 1.8E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 96 5.5E-18 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Gene3D G3DSA:2.60.40.10 1 133 1.8E-41 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 SUPERFAMILY SSF81296 7 144 2.24E-42 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 SUPERFAMILY SSF51445 135 463 8.07E-127 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 SUPERFAMILY SSF51445 492 565 8.07E-127 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Gene3D G3DSA:3.20.20.80 134 572 1.8E-110 T 29-03-2018 CKQ55_RS14935 a1f3ff4c2d1935c8538c40d1c8af6f1f 658 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 71.054 T 29-03-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 Gene3D G3DSA:1.10.150.310 78 121 1.8E-13 T 29-03-2018 CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 SMART SM00278 99 118 3.1 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 SMART SM00278 69 88 8.1 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 Gene3D G3DSA:1.10.150.20 17 77 3.5E-8 T 29-03-2018 CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 Pfam PF12836 Helix-hairpin-helix motif 57 119 5.3E-20 T 29-03-2018 CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 SUPERFAMILY SSF47781 42 116 1.67E-24 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS06170 090c165aec0abd359d37c4d682bfb7f9 121 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 54 119 3.0E-35 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CKQ55_RS04070 1ea91bcff30aae198184342bfeba9f70 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 238 4.2E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04070 1ea91bcff30aae198184342bfeba9f70 246 SUPERFAMILY SSF161098 24 223 1.06E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04070 1ea91bcff30aae198184342bfeba9f70 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 132 1.0E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS04070 1ea91bcff30aae198184342bfeba9f70 246 Gene3D G3DSA:1.10.3720.10 17 239 8.1E-39 T 29-03-2018 CKQ55_RS23035 cdf317b3922e85ce44d94482e4d29f44 301 Pfam PF09160 FimH, mannose binding 25 169 1.3E-59 T 29-03-2018 IPR015243 FimH, mannose-binding domain CKQ55_RS23035 cdf317b3922e85ce44d94482e4d29f44 301 Gene3D G3DSA:2.60.40.1090 23 180 1.6E-58 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23035 cdf317b3922e85ce44d94482e4d29f44 301 Gene3D G3DSA:2.60.40.1090 181 301 1.8E-17 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23035 cdf317b3922e85ce44d94482e4d29f44 301 SUPERFAMILY SSF49401 23 180 6.96E-61 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS23035 cdf317b3922e85ce44d94482e4d29f44 301 Pfam PF00419 Fimbrial protein 175 300 1.1E-8 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23035 cdf317b3922e85ce44d94482e4d29f44 301 SUPERFAMILY SSF49401 182 301 4.97E-25 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 Pfam PF03466 LysR substrate binding domain 96 286 5.0E-27 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 Gene3D G3DSA:3.40.190.10 183 262 1.8E-12 T 29-03-2018 CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 Gene3D G3DSA:3.40.190.10 99 182 2.0E-13 T 29-03-2018 CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 SUPERFAMILY SSF46785 10 119 2.23E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 Gene3D G3DSA:1.10.10.10 8 93 8.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21105 5411074ffd6e3e79ecec9784bf082c04 308 SUPERFAMILY SSF53850 97 291 1.99E-26 T 29-03-2018 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 SUPERFAMILY SSF54849 137 203 1.79E-24 T 29-03-2018 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 Gene3D G3DSA:1.10.560.10 374 516 1.9E-24 T 29-03-2018 IPR027413 GroEL-like equatorial domain CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.658 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 SUPERFAMILY SSF52029 184 376 6.28E-83 T 29-03-2018 IPR027409 GroEL-like apical domain CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 Gene3D G3DSA:3.50.7.10 186 373 1.0E-97 T 29-03-2018 IPR027409 GroEL-like apical domain CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.8E-256 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 SUPERFAMILY SSF48592 406 521 4.43E-77 T 29-03-2018 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 SUPERFAMILY SSF48592 7 134 4.43E-77 T 29-03-2018 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 Gene3D G3DSA:1.10.560.10 1 185 2.3E-43 T 29-03-2018 IPR027413 GroEL-like equatorial domain CKQ55_RS10710 380d07897a68bc93ff5a88a7058cd806 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.0E-95 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CKQ55_RS24895 ec88eaa2e5664150b83b9432f019d5eb 176 Gene3D G3DSA:2.60.40.1090 26 176 7.6E-35 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS24895 ec88eaa2e5664150b83b9432f019d5eb 176 Pfam PF00419 Fimbrial protein 28 175 2.3E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS24895 ec88eaa2e5664150b83b9432f019d5eb 176 SUPERFAMILY SSF49401 27 176 3.58E-36 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 Pfam PF00232 Glycosyl hydrolase family 1 4 473 3.2E-133 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 1.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 1.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 1.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 Gene3D G3DSA:3.20.20.80 1 476 3.5E-155 T 29-03-2018 CKQ55_RS20340 d36ecf377e2a0da821984336d1c83e13 476 SUPERFAMILY SSF51445 2 469 2.83E-165 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS25495 dc859aa54f53a6ca15fecedc598d0092 148 Pfam PF04239 Protein of unknown function (DUF421) 86 147 1.8E-13 T 29-03-2018 IPR007353 Protein of unknown function DUF421 CKQ55_RS25495 dc859aa54f53a6ca15fecedc598d0092 148 Gene3D G3DSA:3.30.240.20 79 148 4.3E-16 T 29-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 SUPERFAMILY SSF53098 3 156 2.62E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.718 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.4E-68 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.3E-44 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.3E-44 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.3E-44 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.3E-44 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.3E-44 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 1.1E-86 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CKQ55_RS23675 2f5480c6016112a7ac45c129ce3ab2f6 173 Gene3D G3DSA:3.30.420.10 2 159 8.2E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 Gene3D G3DSA:3.30.1330.10 31 161 7.3E-53 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 SUPERFAMILY SSF56042 171 342 3.14E-64 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 3.0E-15 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 5.7E-154 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 SUPERFAMILY SSF55326 7 170 3.89E-53 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 Gene3D G3DSA:3.90.650.10 171 345 1.3E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.307 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS20325 6eae97b9a405ed066606e4e90fa75162 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 1.3E-37 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.5E-31 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 SUPERFAMILY SSF50486 208 309 2.04E-37 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.862 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 Gene3D G3DSA:3.10.25.10 210 314 5.8E-34 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 SUPERFAMILY SSF53328 5 207 9.03E-68 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 Gene3D G3DSA:3.40.50.170 2 209 1.8E-69 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 Pfam PF00551 Formyl transferase 6 184 4.2E-55 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS15480 27630d087d28f3d27e1c9a99f8b25675 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 3.4E-123 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CKQ55_RS04255 7f1645f1c33a8b07ece2f8ce3573d701 386 Gene3D G3DSA:3.90.1150.10 272 386 1.7E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS04255 7f1645f1c33a8b07ece2f8ce3573d701 386 Pfam PF00155 Aminotransferase class I and II 32 383 1.7E-56 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS04255 7f1645f1c33a8b07ece2f8ce3573d701 386 Gene3D G3DSA:3.40.640.10 45 271 2.5E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS04255 7f1645f1c33a8b07ece2f8ce3573d701 386 SUPERFAMILY SSF53383 11 385 3.32E-96 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS15410 857124bdbc379af20770a774cc97a37c 144 SUPERFAMILY SSF52080 4 143 4.45E-47 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CKQ55_RS15410 857124bdbc379af20770a774cc97a37c 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15410 857124bdbc379af20770a774cc97a37c 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 4.8E-51 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15410 857124bdbc379af20770a774cc97a37c 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.9E-32 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CKQ55_RS15410 857124bdbc379af20770a774cc97a37c 144 Gene3D G3DSA:3.100.10.10 42 144 3.8E-25 T 29-03-2018 CKQ55_RS15410 857124bdbc379af20770a774cc97a37c 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.417 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 4.2E-135 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 Gene3D G3DSA:1.10.287.70 573 640 1.7E-17 T 29-03-2018 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 SUPERFAMILY SSF81442 43 560 1.19E-179 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 29-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 Gene3D G3DSA:1.20.210.10 43 561 1.0E-185 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06240 9d98c13034b8b9f02f3d17c39fd66035 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.4E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 SMART SM00981 56 154 5.3E-19 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Gene3D G3DSA:3.40.50.150 491 701 4.5E-41 T 29-03-2018 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Gene3D G3DSA:3.40.50.150 139 383 1.1E-32 T 29-03-2018 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Pfam PF02926 THUMP domain 24 153 3.0E-18 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 PIRSF PIRSF037618 1 701 6.9E-297 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 3.0E-5 T 29-03-2018 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 3.0E-5 T 29-03-2018 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 SUPERFAMILY SSF53335 394 697 3.01E-69 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 701 32.684 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 3.1E-64 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 474 657 1.8E-22 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 Gene3D G3DSA:3.30.750.80 388 490 8.7E-10 T 29-03-2018 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 SUPERFAMILY SSF53335 258 373 8.56E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS01955 c8e77be13e4d455a0cfa562319c2b0bf 701 SUPERFAMILY SSF53335 146 217 8.56E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS09040 c9c47b3f1792b999695280529a61fd7f 130 Gene3D G3DSA:3.30.1330.40 16 130 3.7E-30 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS09040 c9c47b3f1792b999695280529a61fd7f 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 1.5E-23 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS09040 c9c47b3f1792b999695280529a61fd7f 130 SUPERFAMILY SSF55298 17 125 8.8E-31 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 SMART SM00475 3 250 5.1E-98 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.877 T 29-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 Gene3D G3DSA:3.40.50.1010 3 173 1.0E-39 T 29-03-2018 IPR029060 PIN domain-like CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 SUPERFAMILY SSF47807 160 243 4.04E-23 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 2.2E-25 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 152 3.2E-28 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 Gene3D G3DSA:1.10.150.20 174 251 1.5E-23 T 29-03-2018 CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 SUPERFAMILY SSF88723 4 159 6.67E-37 T 29-03-2018 IPR029060 PIN domain-like CKQ55_RS18480 ed1b472f083d4639de7732d421b69e3d 251 SMART SM00279 162 197 1.1E-10 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 SUPERFAMILY SSF53335 4 531 7.25E-133 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 Pfam PF12161 HsdM N-terminal domain 7 121 2.9E-13 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 Pfam PF02384 N-6 DNA Methylase 132 458 9.3E-83 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 Gene3D G3DSA:3.40.50.150 154 482 1.4E-52 T 29-03-2018 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 5.3E-21 T 29-03-2018 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 194 5.3E-21 T 29-03-2018 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 5.3E-21 T 29-03-2018 CKQ55_RS09255 2de275f57c44a6696a1a45df2a8609f6 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 156 172 5.3E-21 T 29-03-2018 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 SUPERFAMILY SSF100950 7 234 1.77E-72 T 29-03-2018 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 504 3.4E-227 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 Gene3D G3DSA:3.40.1080.10 1 235 1.8E-52 T 29-03-2018 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 35 506 9.6E-224 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 Gene3D G3DSA:3.40.1080.10 237 480 3.2E-38 T 29-03-2018 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 SUPERFAMILY SSF100950 239 504 3.7E-61 T 29-03-2018 CKQ55_RS01525 7d595ee0e8bf9c4b8e89cdc1dfbd6c90 506 PIRSF PIRSF009451 2 506 2.0E-236 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CKQ55_RS09805 48d3b9a69805c8c360d05dc08b72471a 865 Pfam PF08665 PglZ domain 474 649 1.1E-68 T 29-03-2018 IPR013973 PglZ domain CKQ55_RS09805 48d3b9a69805c8c360d05dc08b72471a 865 SUPERFAMILY SSF53649 474 652 4.04E-7 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS09805 48d3b9a69805c8c360d05dc08b72471a 865 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 4 856 0.0 T 29-03-2018 IPR014060 Conserved hypothetical protein CHP02687 CKQ55_RS09805 48d3b9a69805c8c360d05dc08b72471a 865 Gene3D G3DSA:3.40.720.10 237 792 6.8E-6 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 Gene3D G3DSA:1.10.10.10 124 231 1.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-26 T 29-03-2018 CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 SUPERFAMILY SSF52172 3 125 4.27E-28 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 SMART SM00448 3 113 2.1E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 212 2.2E-11 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 SUPERFAMILY SSF46894 144 230 6.24E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS22530 024ed02a04ea5ca0e9050d492a8c2b69 232 SMART SM00862 155 230 1.1E-10 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS01380 7543610a893699d5679d3df5ace44238 345 Pfam PF00355 Rieske [2Fe-2S] domain 26 105 4.4E-16 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS01380 7543610a893699d5679d3df5ace44238 345 Gene3D G3DSA:3.90.380.10 127 338 9.7E-37 T 29-03-2018 CKQ55_RS01380 7543610a893699d5679d3df5ace44238 345 SUPERFAMILY SSF50022 13 131 2.75E-32 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS01380 7543610a893699d5679d3df5ace44238 345 Gene3D G3DSA:2.102.10.10 20 126 4.5E-26 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS01380 7543610a893699d5679d3df5ace44238 345 SUPERFAMILY SSF55961 125 338 1.59E-25 T 29-03-2018 CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 SUPERFAMILY SSF51717 15 208 9.42E-10 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 PIRSF PIRSF004640 1 363 2.3E-148 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 Pfam PF04551 GcpE protein 13 353 1.2E-131 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 Gene3D G3DSA:3.20.20.120 19 176 9.9E-18 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.551 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 SUPERFAMILY SSF56014 265 353 2.14E-10 T 29-03-2018 CKQ55_RS20205 2be2f8b279ac6f3b9a555f536c29b853 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 1.5E-125 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CKQ55_RS09310 0921f4e8d95e05032f2435520fc8c8ec 266 SMART SM00862 24 100 1.3E-4 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS09310 0921f4e8d95e05032f2435520fc8c8ec 266 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 94 5.1E-8 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS09310 0921f4e8d95e05032f2435520fc8c8ec 266 SUPERFAMILY SSF46894 19 95 1.67E-9 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS09310 0921f4e8d95e05032f2435520fc8c8ec 266 Gene3D G3DSA:1.10.10.10 3 103 4.4E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 Gene3D G3DSA:3.30.420.40 217 429 4.4E-30 T 29-03-2018 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 SUPERFAMILY SSF53067 85 204 1.37E-25 T 29-03-2018 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 SUPERFAMILY SSF53067 1 44 1.37E-25 T 29-03-2018 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 SUPERFAMILY SSF53067 208 276 1.54E-30 T 29-03-2018 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 SUPERFAMILY SSF53067 328 447 1.54E-30 T 29-03-2018 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 Pfam PF00012 Hsp70 protein 130 228 7.1E-8 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 Pfam PF00012 Hsp70 protein 331 421 6.9E-5 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS22545 c8c2404b05bce745107b6a6e2cb1def7 450 Gene3D G3DSA:3.30.420.40 1 216 6.7E-33 T 29-03-2018 CKQ55_RS21205 4d8c19f8d2dfec5494e689ccd6ff5fe1 169 Pfam PF00419 Fimbrial protein 23 169 2.4E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS21205 4d8c19f8d2dfec5494e689ccd6ff5fe1 169 SUPERFAMILY SSF49401 22 169 3.58E-28 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS21205 4d8c19f8d2dfec5494e689ccd6ff5fe1 169 Gene3D G3DSA:2.60.40.1090 20 169 1.6E-29 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 Gene3D G3DSA:1.20.1090.10 183 382 1.8E-67 T 29-03-2018 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 1.0E-121 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 SUPERFAMILY SSF56796 3 380 1.13E-126 T 29-03-2018 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 Gene3D G3DSA:3.40.50.1970 8 182 6.8E-42 T 29-03-2018 CKQ55_RS12405 11f65432a0ee8ad75395acfd26b19324 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 2.1E-180 T 29-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CKQ55_RS19390 b762af1c4e1b4447a024fb3de6d8b6c9 143 SUPERFAMILY SSF69118 11 142 1.03E-40 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS19390 b762af1c4e1b4447a024fb3de6d8b6c9 143 Gene3D G3DSA:1.20.1290.10 3 143 5.1E-34 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS19390 b762af1c4e1b4447a024fb3de6d8b6c9 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 14 94 3.2E-21 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS19390 b762af1c4e1b4447a024fb3de6d8b6c9 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 77 3.4E-15 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS07665 d665e2eb999afa4254a3cf4312e44af1 232 SUPERFAMILY SSF53167 1 229 6.55E-73 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS07665 d665e2eb999afa4254a3cf4312e44af1 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 8.0E-129 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS07665 d665e2eb999afa4254a3cf4312e44af1 232 Gene3D G3DSA:3.40.50.1580 1 232 4.2E-56 T 29-03-2018 CKQ55_RS07665 d665e2eb999afa4254a3cf4312e44af1 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.074 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS07665 d665e2eb999afa4254a3cf4312e44af1 232 Pfam PF01048 Phosphorylase superfamily 2 225 4.3E-47 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS07205 f772a8155bd8719d295fc49952972a2a 175 Gene3D G3DSA:3.10.560.10 93 172 1.2E-14 T 29-03-2018 CKQ55_RS07205 f772a8155bd8719d295fc49952972a2a 175 Pfam PF10531 SLBB domain 103 147 7.5E-9 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS07205 f772a8155bd8719d295fc49952972a2a 175 Gene3D G3DSA:3.30.1950.10 31 92 6.4E-16 T 29-03-2018 CKQ55_RS07205 f772a8155bd8719d295fc49952972a2a 175 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 97 3.7E-18 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 Gene3D G3DSA:3.40.50.1100 193 397 2.4E-37 T 29-03-2018 CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 375 3.8E-49 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.611 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 SUPERFAMILY SSF53686 6 390 5.24E-143 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 PIRSF PIRSF001413 1 397 1.0E-172 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 Gene3D G3DSA:3.40.50.1100 9 192 2.9E-44 T 29-03-2018 CKQ55_RS29525 bd56bed60aca5b4c63700c134055b30f 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 7.4E-189 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 SUPERFAMILY SSF55811 1 127 3.11E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 Pfam PF00293 NUDIX domain 8 125 2.9E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 PRINTS PR01401 Mutator MutT protein signature 2 23 2.4E-13 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 PRINTS PR01401 Mutator MutT protein signature 77 90 2.4E-13 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 Gene3D G3DSA:3.90.79.10 1 129 2.9E-29 T 29-03-2018 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.1E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.1E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS08090 33a1d63fd12cbc29bb5f6b240977b06e 133 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 8.8E-60 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 143 173 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 407 9.8E-69 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 Pfam PF02056 Family 4 glycosyl hydrolase 3 188 7.3E-63 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 SUPERFAMILY SSF56327 172 434 1.37E-77 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 114 134 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 143 160 3.6E-38 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 SUPERFAMILY SSF51735 1 171 1.63E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 Gene3D G3DSA:3.90.1820.10 305 435 8.9E-37 T 29-03-2018 CKQ55_RS01660 1a2958b9f8a8d42514519d94dbe518f7 435 Gene3D G3DSA:3.90.1820.10 1 304 8.3E-70 T 29-03-2018 CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.8E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 Pfam PF03466 LysR substrate binding domain 95 154 8.3E-7 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 Gene3D G3DSA:1.10.10.10 7 87 7.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 SUPERFAMILY SSF53850 95 151 3.26E-8 T 29-03-2018 CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 SUPERFAMILY SSF46785 5 83 1.03E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03705 aabf725d59979ccb7275312f518361a7 159 Gene3D G3DSA:3.40.190.10 88 159 3.1E-9 T 29-03-2018 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 Gene3D G3DSA:3.90.1820.10 1 456 4.4E-97 T 29-03-2018 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 SUPERFAMILY SSF51735 2 167 2.96E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 SUPERFAMILY SSF56327 166 451 3.11E-49 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 192 436 1.6E-39 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 Pfam PF02056 Family 4 glycosyl hydrolase 2 181 4.8E-26 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 92 105 7.5E-21 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 7.5E-21 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 162 173 7.5E-21 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 71 87 7.5E-21 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 106 126 7.5E-21 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13555 d283ea6689bf9acdae59da77ea73abef 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 188 200 7.5E-21 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23780 5f334859973ff600da9ef7acb68ae4b6 219 Gene3D G3DSA:3.30.420.10 1 160 8.4E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS23780 5f334859973ff600da9ef7acb68ae4b6 219 Pfam PF00929 Exonuclease 4 147 8.2E-14 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS23780 5f334859973ff600da9ef7acb68ae4b6 219 SUPERFAMILY SSF53098 4 182 1.17E-33 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS23780 5f334859973ff600da9ef7acb68ae4b6 219 SMART SM00479 1 156 2.7E-36 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS12485 cf920f3a7f3d0cf86eb299747fd1520d 876 Pfam PF13953 PapC C-terminal domain 798 861 6.1E-24 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS12485 cf920f3a7f3d0cf86eb299747fd1520d 876 Pfam PF00577 Outer membrane usher protein 203 789 1.9E-219 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS12485 cf920f3a7f3d0cf86eb299747fd1520d 876 Pfam PF13954 PapC N-terminal domain 43 189 1.1E-51 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS12485 cf920f3a7f3d0cf86eb299747fd1520d 876 SUPERFAMILY SSF141729 42 167 3.79E-35 T 29-03-2018 CKQ55_RS12485 cf920f3a7f3d0cf86eb299747fd1520d 876 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 318 328 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 SUPERFAMILY SSF55811 3 96 2.11E-30 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 SUPERFAMILY SSF55811 79 241 1.68E-40 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 2.0E-12 T 29-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 Gene3D G3DSA:3.90.79.10 126 257 1.1E-34 T 29-03-2018 CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 Pfam PF00293 NUDIX domain 132 233 8.2E-16 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS11485 8171ef7befb2cd53da6e7eb1e0609734 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 47.369 T 29-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CKQ55_RS12085 34d1a66f8a84bc6b5a946f2703a5c57e 309 SUPERFAMILY SSF56752 7 307 3.79E-106 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS12085 34d1a66f8a84bc6b5a946f2703a5c57e 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.6E-145 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CKQ55_RS12085 34d1a66f8a84bc6b5a946f2703a5c57e 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS12085 34d1a66f8a84bc6b5a946f2703a5c57e 309 Gene3D G3DSA:3.20.10.10 143 303 6.0E-51 T 29-03-2018 CKQ55_RS12085 34d1a66f8a84bc6b5a946f2703a5c57e 309 Gene3D G3DSA:3.30.470.10 1 142 7.0E-44 T 29-03-2018 CKQ55_RS12085 34d1a66f8a84bc6b5a946f2703a5c57e 309 Pfam PF01063 Amino-transferase class IV 36 268 4.4E-50 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 1.7E-107 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.7E-6 T 29-03-2018 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 Gene3D G3DSA:3.20.20.70 1 329 5.1E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.2E-38 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.751 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 SUPERFAMILY SSF102114 5 278 5.62E-70 T 29-03-2018 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 SMART SM00729 14 222 2.0E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 Pfam PF04055 Radical SAM superfamily 19 181 1.5E-26 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS03290 7197745332d5a9667b5ab350eba87890 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 Gene3D G3DSA:3.30.1330.60 83 220 5.1E-43 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 Pfam PF00691 OmpA family 115 210 1.4E-22 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 3.1E-7 T 29-03-2018 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 3.1E-7 T 29-03-2018 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 3.1E-7 T 29-03-2018 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 3.1E-7 T 29-03-2018 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01021 OMPA domain signature 161 177 1.1E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01021 OMPA domain signature 146 161 1.1E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 PRINTS PR01021 OMPA domain signature 116 138 1.1E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 Pfam PF13488 Glycine zipper 37 85 7.8E-13 T 29-03-2018 CKQ55_RS14115 71fed6cfb701399c246af7dec606a9d3 220 SUPERFAMILY SSF103088 103 218 1.96E-38 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS10490 4c51793bdc9d79a7f8ee2d39b36167a6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.66 T 29-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 CKQ55_RS10490 4c51793bdc9d79a7f8ee2d39b36167a6 141 Gene3D G3DSA:1.10.10.10 1 136 2.0E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10490 4c51793bdc9d79a7f8ee2d39b36167a6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 1.8E-36 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CKQ55_RS10490 4c51793bdc9d79a7f8ee2d39b36167a6 141 Pfam PF02082 Transcriptional regulator 2 82 3.7E-23 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CKQ55_RS10490 4c51793bdc9d79a7f8ee2d39b36167a6 141 SUPERFAMILY SSF46785 2 131 2.22E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10490 4c51793bdc9d79a7f8ee2d39b36167a6 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Gene3D G3DSA:3.10.450.40 214 303 9.9E-27 T 29-03-2018 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Gene3D G3DSA:2.70.98.20 304 752 1.8E-143 T 29-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Gene3D G3DSA:3.30.457.10 33 111 6.2E-13 T 29-03-2018 IPR012854 Copper amine oxidase-like, N-terminal CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Gene3D G3DSA:3.10.450.40 114 212 5.2E-27 T 29-03-2018 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 SUPERFAMILY SSF54416 119 211 3.6E-25 T 29-03-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 SUPERFAMILY SSF54416 213 321 1.64E-27 T 29-03-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 482 495 - T 29-03-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Pfam PF07833 Copper amine oxidase N-terminal domain 34 107 4.6E-12 T 29-03-2018 IPR012854 Copper amine oxidase-like, N-terminal CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Pfam PF02728 Copper amine oxidase, N3 domain 213 314 3.9E-28 T 29-03-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 711 724 - T 29-03-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Pfam PF02727 Copper amine oxidase, N2 domain 121 206 3.2E-27 T 29-03-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 SUPERFAMILY SSF49998 329 748 6.28E-142 T 29-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 Pfam PF01179 Copper amine oxidase, enzyme domain 334 747 5.1E-127 T 29-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 CKQ55_RS28355 6876746331b75e8ee75d3303a05e0b49 752 SUPERFAMILY SSF55383 33 112 5.75E-19 T 29-03-2018 IPR012854 Copper amine oxidase-like, N-terminal CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 SUPERFAMILY SSF47413 5 63 2.57E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 Gene3D G3DSA:3.40.50.2300 60 180 1.0E-18 T 29-03-2018 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 SUPERFAMILY SSF53822 62 325 3.24E-53 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 7.1E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 Pfam PF13377 Periplasmic binding protein-like domain 173 331 8.5E-32 T 29-03-2018 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 SMART SM00354 5 75 9.6E-28 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 Gene3D G3DSA:3.40.50.2300 181 335 2.8E-38 T 29-03-2018 CKQ55_RS06005 99313c5cb84eb1ec79ec73ab73084d23 357 Gene3D G3DSA:1.10.260.40 6 59 8.4E-21 T 29-03-2018 CKQ55_RS11530 5f627ff132847f010d958924a1346a0f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 7.5E-25 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS11530 5f627ff132847f010d958924a1346a0f 101 Gene3D G3DSA:3.40.50.2300 2 101 2.2E-37 T 29-03-2018 CKQ55_RS11530 5f627ff132847f010d958924a1346a0f 101 SUPERFAMILY SSF52794 1 101 4.45E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS09965 704e6d49e681d50b72d6455c2dbc0415 285 SUPERFAMILY SSF46689 13 86 1.34E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS09965 704e6d49e681d50b72d6455c2dbc0415 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 82 1.4E-12 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS09965 704e6d49e681d50b72d6455c2dbc0415 285 Pfam PF01380 SIS domain 143 269 3.2E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS09965 704e6d49e681d50b72d6455c2dbc0415 285 Gene3D G3DSA:3.40.50.10490 82 284 5.3E-29 T 29-03-2018 CKQ55_RS09965 704e6d49e681d50b72d6455c2dbc0415 285 Gene3D G3DSA:1.10.10.10 6 81 5.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09965 704e6d49e681d50b72d6455c2dbc0415 285 SUPERFAMILY SSF53697 110 272 6.27E-26 T 29-03-2018 CKQ55_RS14635 acb7967ef1102d437797ee3b8b02cbd8 773 SUPERFAMILY SSF82866 247 403 7.06E-21 T 29-03-2018 CKQ55_RS14635 acb7967ef1102d437797ee3b8b02cbd8 773 SUPERFAMILY SSF82866 637 765 1.83E-17 T 29-03-2018 CKQ55_RS14635 acb7967ef1102d437797ee3b8b02cbd8 773 Pfam PF03176 MMPL family 250 395 1.6E-8 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CKQ55_RS14635 acb7967ef1102d437797ee3b8b02cbd8 773 Gene3D G3DSA:1.20.1640.10 713 765 0.009 T 29-03-2018 CKQ55_RS14635 acb7967ef1102d437797ee3b8b02cbd8 773 Gene3D G3DSA:1.20.1640.10 598 707 1.2E-9 T 29-03-2018 CKQ55_RS14635 acb7967ef1102d437797ee3b8b02cbd8 773 Gene3D G3DSA:1.20.1640.10 202 405 1.5E-20 T 29-03-2018 CKQ55_RS15420 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15420 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 29-03-2018 CKQ55_RS15420 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.3E-20 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15420 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15420 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15420 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS22625 aa91dcaa9c3a3fc11369d93143484c52 292 Gene3D G3DSA:3.90.550.10 2 280 3.4E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22625 aa91dcaa9c3a3fc11369d93143484c52 292 Pfam PF00535 Glycosyl transferase family 2 8 114 4.0E-27 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS22625 aa91dcaa9c3a3fc11369d93143484c52 292 SUPERFAMILY SSF53448 6 237 1.41E-48 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS04650 706e656899ea886e0563ec0ced6bbf25 213 Pfam PF01810 LysE type translocator 14 204 5.2E-26 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS04650 706e656899ea886e0563ec0ced6bbf25 213 PIRSF PIRSF006324 1 207 4.7E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.6E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.2E-10 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 6.5E-11 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 3.9E-14 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 9.8E-16 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 8.6E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 8.4E-154 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 SMART SM00434 11 499 7.5E-301 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Gene3D G3DSA:3.90.199.10 286 375 1.6E-9 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 29-03-2018 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 SUPERFAMILY SSF101904 533 851 4.19E-112 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Gene3D G3DSA:1.10.268.10 376 497 9.0E-51 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Gene3D G3DSA:2.120.10.90 533 856 2.4E-135 T 29-03-2018 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.642 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 Gene3D G3DSA:3.90.199.10 34 285 4.2E-115 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS21390 946b6c29ab3b28cab5fa307adbcfcf44 877 SUPERFAMILY SSF56719 30 521 3.66E-183 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 TIGRFAM TIGR00874 talAB: transaldolase 2 315 6.3E-148 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 312 2.1E-95 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 Hamap MF_00492 Transaldolase [tal]. 1 316 50.291 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 Gene3D G3DSA:3.20.20.70 1 316 5.0E-115 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS00590 dc94e081049662cd9a0341261d1f4168 316 SUPERFAMILY SSF51569 1 315 1.99E-108 T 29-03-2018 CKQ55_RS07805 aefb1800d38238e780a60a28ccdb017d 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 227 3.0E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS07805 aefb1800d38238e780a60a28ccdb017d 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 132 149 3.0E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS07805 aefb1800d38238e780a60a28ccdb017d 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 211 3.0E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS07805 aefb1800d38238e780a60a28ccdb017d 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 189 199 3.0E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS07805 aefb1800d38238e780a60a28ccdb017d 265 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 25 110 1.6E-29 T 29-03-2018 IPR010627 Peptidase A24A, N-terminal CKQ55_RS07805 aefb1800d38238e780a60a28ccdb017d 265 Pfam PF01478 Type IV leader peptidase family 124 231 2.4E-27 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CKQ55_RS08710 48fc0280d4257e14ddc7e43cf5430e4d 157 PIRSF PIRSF003174 1 157 5.4E-70 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CKQ55_RS08710 48fc0280d4257e14ddc7e43cf5430e4d 157 Pfam PF05981 CreA protein 24 155 2.5E-59 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 Gene3D G3DSA:3.20.20.450 389 645 2.1E-40 T 29-03-2018 IPR001633 EAL domain CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 SMART SM00052 395 635 7.1E-40 T 29-03-2018 IPR001633 EAL domain CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 SUPERFAMILY SSF141868 403 640 3.27E-32 T 29-03-2018 IPR001633 EAL domain CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 Gene3D G3DSA:3.30.70.270 218 388 5.9E-23 T 29-03-2018 CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 Pfam PF00563 EAL domain 403 628 3.1E-35 T 29-03-2018 IPR001633 EAL domain CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 380 1.0E-25 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 2.6E-28 T 29-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 SUPERFAMILY SSF55073 230 387 2.12E-20 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS15645 8959ac79f5c192b5721d52ee79f06896 646 SMART SM00267 213 385 1.0E-27 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS03460 693a46f219b014a05a1c31b6eb0dd83d 257 PIRSF PIRSF004846 3 257 1.0E-80 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CKQ55_RS03460 693a46f219b014a05a1c31b6eb0dd83d 257 Gene3D G3DSA:3.40.190.10 122 218 2.6E-32 T 29-03-2018 CKQ55_RS03460 693a46f219b014a05a1c31b6eb0dd83d 257 Gene3D G3DSA:3.40.190.10 26 121 6.2E-18 T 29-03-2018 CKQ55_RS03460 693a46f219b014a05a1c31b6eb0dd83d 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 2.0E-85 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CKQ55_RS03460 693a46f219b014a05a1c31b6eb0dd83d 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 3.7E-50 T 29-03-2018 CKQ55_RS03460 693a46f219b014a05a1c31b6eb0dd83d 257 SUPERFAMILY SSF53850 28 255 7.56E-71 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82866 812 1010 2.88E-44 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82714 183 266 1.96E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82866 291 490 1.83E-49 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82693 555 650 1.05E-18 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82714 703 785 4.05E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Gene3D G3DSA:1.20.1640.10 801 1019 2.1E-36 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Gene3D G3DSA:1.20.1640.10 281 503 1.2E-48 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 26.695 T 29-03-2018 IPR023931 Multidrug resistance protein MdtC CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82693 40 135 3.66E-23 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Gene3D G3DSA:3.30.2090.10 701 788 1.0E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Gene3D G3DSA:3.30.2090.10 181 269 3.1E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.0E-87 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82693 136 182 8.63E-23 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82693 268 324 8.63E-23 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82693 663 701 6.1E-6 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 SUPERFAMILY SSF82693 788 834 6.1E-6 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Gene3D G3DSA:3.30.70.1430 557 652 5.6E-15 T 29-03-2018 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22435 2c877a980a16d1c989c2657dcb2c5b11 1025 Gene3D G3DSA:3.30.70.1430 40 142 1.3E-25 T 29-03-2018 CKQ55_RS25990 db70812733d7926094e68196716da08e 255 Gene3D G3DSA:3.40.50.1820 1 252 2.0E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS25990 db70812733d7926094e68196716da08e 255 Pfam PF12146 Serine aminopeptidase, S33 37 222 7.8E-14 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CKQ55_RS25990 db70812733d7926094e68196716da08e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 4.6E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25990 db70812733d7926094e68196716da08e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 4.6E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25990 db70812733d7926094e68196716da08e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 4.6E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25990 db70812733d7926094e68196716da08e 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 195 209 4.6E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25990 db70812733d7926094e68196716da08e 255 SUPERFAMILY SSF53474 3 249 4.17E-57 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS25990 db70812733d7926094e68196716da08e 255 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 3 249 8.6E-85 T 29-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 CKQ55_RS07305 3f80ffff63fcd4f11a16425a6e6ed3a8 212 Pfam PF02508 Rnf-Nqr subunit, membrane protein 12 198 2.8E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS07305 3f80ffff63fcd4f11a16425a6e6ed3a8 212 PIRSF PIRSF006102 6 212 4.5E-70 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS07305 3f80ffff63fcd4f11a16425a6e6ed3a8 212 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 5 210 36.446 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CKQ55_RS07305 3f80ffff63fcd4f11a16425a6e6ed3a8 212 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 8 210 3.7E-105 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 SUPERFAMILY SSF63380 148 253 1.55E-28 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 SUPERFAMILY SSF52343 257 394 3.93E-35 T 29-03-2018 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 9.8E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Gene3D G3DSA:1.10.490.10 1 157 3.4E-39 T 29-03-2018 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 1.2E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.8E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.8E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.8E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.8E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Gene3D G3DSA:3.40.50.80 255 396 4.5E-22 T 29-03-2018 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Gene3D G3DSA:2.40.30.10 158 254 1.1E-25 T 29-03-2018 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 SUPERFAMILY SSF46458 1 142 2.33E-37 T 29-03-2018 IPR009050 Globin-like CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Pfam PF00042 Globin 7 102 2.4E-14 T 29-03-2018 IPR000971 Globin GO:0020037 CKQ55_RS20040 78d93c2e54dc55eedc91a67812ae2f29 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.622 T 29-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 SUPERFAMILY SSF55252 82 149 1.96E-18 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 2.4E-26 T 29-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 151 1.5E-46 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 SUPERFAMILY SSF46785 3 77 1.27E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 2.6E-21 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 Gene3D G3DSA:3.30.1360.40 76 151 1.5E-24 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 1.0E-28 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.199 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CKQ55_RS15725 1c262e2042088fcd69b22b8717e890a7 156 Gene3D G3DSA:1.10.10.10 5 69 4.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 SMART SM00739 127 154 1.0E-6 T 29-03-2018 IPR005824 KOW CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 Gene3D G3DSA:3.30.70.940 6 119 8.2E-42 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 6.7E-71 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 SUPERFAMILY SSF50104 125 180 1.0E-19 T 29-03-2018 IPR008991 Translation protein SH3-like domain CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.701 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 SMART SM00738 6 115 8.6E-51 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 Pfam PF00467 KOW motif 130 162 5.4E-8 T 29-03-2018 IPR005824 KOW CKQ55_RS11580 bfe6035c5e3437c13b1168e995c2f42b 181 Gene3D G3DSA:2.30.30.30 122 181 1.0E-21 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.6E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 SMART SM00345 15 74 3.0E-29 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 SUPERFAMILY SSF46785 6 77 3.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 Gene3D G3DSA:1.20.120.530 79 245 3.2E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 Gene3D G3DSA:1.10.10.10 2 76 5.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 SUPERFAMILY SSF48008 95 234 1.41E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 SMART SM00895 99 227 4.3E-17 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 Pfam PF07729 FCD domain 99 226 3.0E-18 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS08020 8ed145911eb62b4f9284d412eff4f181 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS30355 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 1.2E-53 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 CKQ55_RS30355 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF01526 Tn3 transposase DDE domain 586 975 4.1E-146 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 29-03-2018 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.8E-23 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 9.4E-113 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 SMART SM00662 23 234 2.5E-105 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:3.30.1360.10 4 90 3.1E-19 T 29-03-2018 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:3.30.1360.10 119 231 5.9E-28 T 29-03-2018 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 29-03-2018 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.587 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS15440 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF56553 53 178 3.31E-41 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS04540 063fb1921379789623a2b1e4e5aa1418 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 8.2E-43 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04540 063fb1921379789623a2b1e4e5aa1418 351 Gene3D G3DSA:1.10.3470.10 28 325 6.8E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 248 1.8E-72 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 SUPERFAMILY SSF53335 5 268 1.18E-75 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 6.4E-99 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 Gene3D G3DSA:3.40.50.150 151 269 3.2E-18 T 29-03-2018 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 6.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 6.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 6.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 6.2E-19 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 Gene3D G3DSA:1.10.1020.10 57 150 1.5E-33 T 29-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CKQ55_RS15075 2ffb12fd58105fb16ca5619fc1f81138 275 PIRSF PIRSF000398 1 275 1.3E-72 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 1.8E-43 T 29-03-2018 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 Gene3D G3DSA:1.10.260.40 25 62 8.3E-19 T 29-03-2018 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 4.3E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 SUPERFAMILY SSF47413 10 67 4.97E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 29-03-2018 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 SMART SM00354 9 79 3.1E-30 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 SUPERFAMILY SSF53822 68 338 2.36E-90 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 Gene3D G3DSA:1.10.10.10 2 24 2.4E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 Gene3D G3DSA:3.40.50.2300 183 342 1.8E-48 T 29-03-2018 CKQ55_RS12285 3ebe05228be6f7793b1264a8fc0caba4 342 Gene3D G3DSA:3.40.50.2300 63 182 5.8E-28 T 29-03-2018 CKQ55_RS24100 935b3b8e7e69d293cd194bcbce8bd8c8 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 158 2.1E-45 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CKQ55_RS24100 935b3b8e7e69d293cd194bcbce8bd8c8 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.058 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB CKQ55_RS24100 935b3b8e7e69d293cd194bcbce8bd8c8 176 SUPERFAMILY SSF158442 15 161 1.96E-45 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CKQ55_RS24100 935b3b8e7e69d293cd194bcbce8bd8c8 176 Gene3D G3DSA:1.20.1550.10 1 176 1.3E-56 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CKQ55_RS07860 53223434876ed5344cc337ca83d97320 201 Pfam PF00419 Fimbrial protein 36 200 6.4E-6 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07860 53223434876ed5344cc337ca83d97320 201 SUPERFAMILY SSF49401 36 201 1.49E-19 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS07860 53223434876ed5344cc337ca83d97320 201 Gene3D G3DSA:2.60.40.1090 34 201 2.4E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS24845 342a0eef793430dfca5cce5cc890b49c 348 Gene3D G3DSA:3.20.20.70 7 348 1.6E-119 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS24845 342a0eef793430dfca5cce5cc890b49c 348 SUPERFAMILY SSF51569 7 345 3.11E-129 T 29-03-2018 CKQ55_RS24845 342a0eef793430dfca5cce5cc890b49c 348 Pfam PF00793 DAHP synthetase I family 39 336 1.3E-104 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS24845 342a0eef793430dfca5cce5cc890b49c 348 PIRSF PIRSF001361 1 348 2.6E-155 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CKQ55_RS24845 342a0eef793430dfca5cce5cc890b49c 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 347 3.2E-169 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 4.0E-80 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Gene3D G3DSA:3.40.250.10 405 481 1.5E-8 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 5.5E-139 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 231.287 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 SUPERFAMILY SSF52402 174 372 1.52E-41 T 29-03-2018 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Gene3D G3DSA:3.30.70.1510 2 82 1.3E-22 T 29-03-2018 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Gene3D G3DSA:3.30.2300.10 84 162 1.5E-20 T 29-03-2018 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 SUPERFAMILY SSF52821 403 481 8.64E-8 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 SUPERFAMILY SSF143437 1 173 1.92E-50 T 29-03-2018 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 SMART SM00981 75 165 3.1E-27 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.9E-39 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Gene3D G3DSA:3.40.50.620 175 400 2.0E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS06335 d3c25f9c1b473134505e38ddcb8300f4 482 Pfam PF02926 THUMP domain 28 161 4.4E-26 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CKQ55_RS19215 3f69499b1b7db2a5f0f386a243235db1 358 SUPERFAMILY SSF53955 47 349 6.0E-97 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS19215 3f69499b1b7db2a5f0f386a243235db1 358 Gene3D G3DSA:1.10.530.10 238 358 1.7E-33 T 29-03-2018 CKQ55_RS19215 3f69499b1b7db2a5f0f386a243235db1 358 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 351 9.5E-124 T 29-03-2018 IPR011757 Lytic transglycosylase MltB CKQ55_RS19215 3f69499b1b7db2a5f0f386a243235db1 358 Gene3D G3DSA:1.10.8.350 128 232 4.8E-37 T 29-03-2018 CKQ55_RS19215 3f69499b1b7db2a5f0f386a243235db1 358 Gene3D G3DSA:1.10.8.350 51 127 3.4E-9 T 29-03-2018 CKQ55_RS19215 3f69499b1b7db2a5f0f386a243235db1 358 Pfam PF13406 Transglycosylase SLT domain 56 349 4.4E-92 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 Gene3D G3DSA:1.10.10.10 66 216 2.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 5.4E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 SUPERFAMILY SSF46894 146 205 6.46E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 SMART SM00421 149 206 3.6E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08885 4736c72f58f1c39370e5d81e93c85841 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS30960 171c6403b81da8f7acb4550c3cd0c156 139 Pfam PF07128 Protein of unknown function (DUF1380) 1 137 3.2E-72 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 CKQ55_RS29175 8c56251fe5cd18f39fc15854af9f79be 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 2.2E-51 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS29175 8c56251fe5cd18f39fc15854af9f79be 278 SUPERFAMILY SSF53850 4 254 3.11E-55 T 29-03-2018 CKQ55_RS29175 8c56251fe5cd18f39fc15854af9f79be 278 SMART SM00062 34 255 1.7E-46 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS29175 8c56251fe5cd18f39fc15854af9f79be 278 Gene3D G3DSA:3.40.190.10 23 175 1.7E-36 T 29-03-2018 CKQ55_RS29175 8c56251fe5cd18f39fc15854af9f79be 278 Gene3D G3DSA:3.40.190.10 176 269 6.3E-10 T 29-03-2018 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PIRSF PIRSF000904 1 331 3.1E-120 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 SUPERFAMILY SSF56655 2 326 4.32E-112 T 29-03-2018 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 Gene3D G3DSA:3.30.540.10 6 197 5.5E-62 T 29-03-2018 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.96 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PIRSF PIRSF500210 1 330 1.1E-123 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 29-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 Gene3D G3DSA:3.40.190.80 198 329 1.3E-57 T 29-03-2018 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 1.1E-82 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 2.9E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 2.9E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 2.9E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 2.9E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 2.9E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS10245 c9644cc68672f8a29c5e74a1eb5fe6a7 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 2.9E-70 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CKQ55_RS20570 3016529211f4fad31aab133fc79f7541 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 2.3E-81 T 29-03-2018 IPR010938 Protein of unknown function DUF1131 CKQ55_RS20570 3016529211f4fad31aab133fc79f7541 191 Gene3D G3DSA:2.60.460.10 31 190 3.4E-67 T 29-03-2018 CKQ55_RS20570 3016529211f4fad31aab133fc79f7541 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 2.0E-79 T 29-03-2018 IPR010938 Protein of unknown function DUF1131 CKQ55_RS13205 56d9b0916bbebbeef8a730227c9adc04 277 SUPERFAMILY SSF103481 175 276 4.05E-13 T 29-03-2018 CKQ55_RS13205 56d9b0916bbebbeef8a730227c9adc04 277 Pfam PF00892 EamA-like transporter family 141 274 9.0E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS13205 56d9b0916bbebbeef8a730227c9adc04 277 SUPERFAMILY SSF103481 43 135 2.09E-11 T 29-03-2018 CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 SUPERFAMILY SSF52540 1 237 6.02E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 SMART SM00382 26 211 2.8E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 Pfam PF00005 ABC transporter 17 161 1.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 Gene3D G3DSA:3.40.50.300 1 263 2.9E-66 T 29-03-2018 CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 Pfam PF08402 TOBE domain 269 333 3.7E-6 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 SUPERFAMILY SSF50331 240 333 6.89E-7 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS01390 1553c3c17c2bebcd3160f6a5d44fe95a 342 Gene3D G3DSA:2.40.50.140 272 333 4.2E-5 T 29-03-2018 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 29-03-2018 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 29-03-2018 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 29-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS02500 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CKQ55_RS13715 a829eae9f6e1d3a9a8d96fa127c656c4 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS13715 a829eae9f6e1d3a9a8d96fa127c656c4 55 SUPERFAMILY SSF57829 1 53 3.3E-20 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CKQ55_RS13715 a829eae9f6e1d3a9a8d96fa127c656c4 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 5.9E-28 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13715 a829eae9f6e1d3a9a8d96fa127c656c4 55 Pfam PF00471 Ribosomal protein L33 7 53 7.3E-19 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13715 a829eae9f6e1d3a9a8d96fa127c656c4 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 SUPERFAMILY SSF53850 91 297 2.17E-46 T 29-03-2018 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 Gene3D G3DSA:3.40.190.10 87 179 7.9E-19 T 29-03-2018 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 Gene3D G3DSA:3.40.190.10 180 261 7.7E-23 T 29-03-2018 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.3E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 SUPERFAMILY SSF46785 6 113 1.22E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 Gene3D G3DSA:1.10.10.10 2 85 2.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS07400 28c571fc751ad72ec53667036a205c23 300 Pfam PF03466 LysR substrate binding domain 90 293 1.3E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS01185 b72bd59bee68e9a59f24bba21fdd0aa8 426 Gene3D G3DSA:3.50.50.60 17 404 1.7E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS01185 b72bd59bee68e9a59f24bba21fdd0aa8 426 Pfam PF01266 FAD dependent oxidoreductase 29 381 1.7E-56 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS01185 b72bd59bee68e9a59f24bba21fdd0aa8 426 SUPERFAMILY SSF51905 28 252 9.06E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS01185 b72bd59bee68e9a59f24bba21fdd0aa8 426 SUPERFAMILY SSF51905 354 412 9.06E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 SUPERFAMILY SSF54556 370 437 5.8E-11 T 29-03-2018 IPR029070 Chitinase insertion domain CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 Gene3D G3DSA:2.10.10.20 642 699 1.5E-10 T 29-03-2018 CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 Gene3D G3DSA:3.20.20.80 3 495 4.0E-72 T 29-03-2018 CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 SUPERFAMILY SSF51445 49 358 8.96E-62 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 SUPERFAMILY SSF51445 439 468 8.96E-62 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 Gene3D G3DSA:3.40.1850.10 522 620 1.1E-9 T 29-03-2018 CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 SMART SM00636 53 467 1.3E-58 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 Pfam PF00704 Glycosyl hydrolases family 18 54 467 1.2E-63 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CKQ55_RS08585 07644bd7f2b729955c6daf1f7bbadf37 699 SUPERFAMILY SSF51055 643 697 1.26E-6 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 Gene3D G3DSA:3.40.50.300 335 586 3.8E-72 T 29-03-2018 CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 Pfam PF00005 ABC transporter 361 510 4.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 SUPERFAMILY SSF52540 339 581 7.56E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 SMART SM00382 370 562 3.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 SUPERFAMILY SSF90123 17 331 1.83E-38 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 Pfam PF00664 ABC transporter transmembrane region 35 294 8.5E-10 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27135 76cc2acb481a5a00d98640ba0220d594 600 Gene3D G3DSA:1.20.1560.10 10 334 8.2E-28 T 29-03-2018 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Pfam PF01568 Molydopterin dinucleotide binding domain 887 998 5.2E-12 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 76 152 5.2E-5 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 SUPERFAMILY SSF53706 137 865 1.45E-113 T 29-03-2018 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 SUPERFAMILY SSF53706 74 110 1.45E-113 T 29-03-2018 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Gene3D G3DSA:2.40.40.20 848 1021 7.1E-24 T 29-03-2018 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Gene3D G3DSA:3.40.50.740 460 792 1.1E-31 T 29-03-2018 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 SUPERFAMILY SSF50692 873 1020 5.88E-24 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 SMART SM00926 71 153 3.7E-15 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Gene3D G3DSA:3.40.50.740 158 396 8.3E-24 T 29-03-2018 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Pfam PF00384 Molybdopterin oxidoreductase 242 683 1.3E-13 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS26995 bf4913fa2e51ae46e0ac90d5ba81fcce 1021 Gene3D G3DSA:2.20.25.90 65 157 4.1E-13 T 29-03-2018 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Gene3D G3DSA:3.30.460.10 188 325 4.0E-40 T 29-03-2018 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 SUPERFAMILY SSF81301 180 393 3.6E-62 T 29-03-2018 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Gene3D G3DSA:3.10.20.30 383 458 7.2E-23 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 SMART SM00954 235 345 7.1E-63 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Pfam PF13328 HD domain 26 175 9.4E-54 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 SUPERFAMILY SSF109604 3 190 1.82E-75 T 29-03-2018 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 SUPERFAMILY SSF81271 376 448 6.32E-21 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 703 4.2E-292 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 SMART SM00471 41 153 4.1E-12 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Gene3D G3DSA:3.30.70.260 627 705 1.2E-9 T 29-03-2018 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Pfam PF02824 TGS domain 389 448 1.2E-20 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 2.2E-35 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 Pfam PF13291 ACT domain 626 703 1.3E-14 T 29-03-2018 IPR002912 ACT domain CKQ55_RS13645 9e6a928a7bbe6d67689bc42ec763079e 706 SUPERFAMILY SSF55021 631 703 1.79E-5 T 29-03-2018 CKQ55_RS03625 749f2ad4f98d6f649eb5ec0b8626e9f8 149 Pfam PF02310 B12 binding domain 6 95 4.3E-14 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CKQ55_RS03625 749f2ad4f98d6f649eb5ec0b8626e9f8 149 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 3 136 1.3E-71 T 29-03-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS03625 749f2ad4f98d6f649eb5ec0b8626e9f8 149 Gene3D G3DSA:3.40.50.280 1 148 1.0E-26 T 29-03-2018 CKQ55_RS03625 749f2ad4f98d6f649eb5ec0b8626e9f8 149 SUPERFAMILY SSF52242 4 138 1.14E-33 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CKQ55_RS03625 749f2ad4f98d6f649eb5ec0b8626e9f8 149 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 37.405 T 29-03-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CKQ55_RS28515 5e670f7c558ecb4b3b324bccf34b17ac 178 Gene3D G3DSA:3.40.430.10 3 176 7.3E-37 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS28515 5e670f7c558ecb4b3b324bccf34b17ac 178 SUPERFAMILY SSF53597 5 176 1.22E-32 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS28515 5e670f7c558ecb4b3b324bccf34b17ac 178 Pfam PF01872 RibD C-terminal domain 6 170 4.3E-16 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Gene3D G3DSA:3.30.70.1430 38 140 3.9E-29 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Gene3D G3DSA:3.30.70.1440 673 770 4.3E-20 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Gene3D G3DSA:3.30.2090.10 180 275 5.3E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82866 808 1034 4.71E-45 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Gene3D G3DSA:1.20.1640.10 826 1032 3.8E-38 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82714 724 811 1.11E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82866 296 497 8.63E-50 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82693 566 670 1.26E-33 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Gene3D G3DSA:1.20.1640.10 287 509 1.0E-44 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.3E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82693 135 182 6.02E-27 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82693 274 330 6.02E-27 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82714 182 271 2.88E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 Gene3D G3DSA:3.30.70.1430 568 669 8.8E-20 T 29-03-2018 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1047 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CKQ55_RS05960 83ac7ee4d5aa80052d3be7ac0ba1fa70 1048 SUPERFAMILY SSF82693 38 133 6.98E-27 T 29-03-2018 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 SUPERFAMILY SSF63882 7 177 4.32E-58 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 1.1E-35 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Gene3D G3DSA:2.40.340.10 330 402 3.9E-22 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Gene3D G3DSA:2.170.190.11 65 142 6.0E-30 T 29-03-2018 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Gene3D G3DSA:3.90.105.10 27 64 2.1E-9 T 29-03-2018 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 SMART SM00852 181 318 2.0E-44 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 SUPERFAMILY SSF63867 328 408 2.49E-25 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 SUPERFAMILY SSF53218 178 322 1.57E-44 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 6.4E-46 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Pfam PF00994 Probable molybdopterin binding domain 181 317 8.5E-29 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Gene3D G3DSA:3.40.980.10 151 324 1.1E-54 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03010 38d64d850f486e209c0c687cee8620c1 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 2.5E-20 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.8E-150 T 29-03-2018 CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 Gene3D G3DSA:1.20.1250.20 19 212 2.6E-31 T 29-03-2018 CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 Gene3D G3DSA:1.20.1250.20 237 439 4.6E-26 T 29-03-2018 CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 SUPERFAMILY SSF103473 16 436 2.62E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 PIRSF PIRSF002808 6 439 3.5E-150 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS13245 b937313b78f2946679e7bed2c398992d 439 Pfam PF07690 Major Facilitator Superfamily 35 396 1.4E-48 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS16780 252c4094e2dea019854b5be7570f9620 263 Gene3D G3DSA:3.40.830.10 1 262 4.3E-83 T 29-03-2018 CKQ55_RS16780 252c4094e2dea019854b5be7570f9620 263 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 260 6.3E-27 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CKQ55_RS16780 252c4094e2dea019854b5be7570f9620 263 SUPERFAMILY SSF53213 5 261 4.19E-91 T 29-03-2018 CKQ55_RS16780 252c4094e2dea019854b5be7570f9620 263 PIRSF PIRSF006157 1 263 4.5E-93 T 29-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 SUPERFAMILY SSF56281 1 251 3.14E-68 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.418 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 3.3E-103 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 7.2E-23 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 Gene3D G3DSA:3.60.15.10 1 251 1.5E-71 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 SMART SM00849 11 165 3.9E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 Pfam PF00753 Metallo-beta-lactamase superfamily 15 165 6.9E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS07375 77c10107381da6b7051208342cdd90bf 251 PIRSF PIRSF005457 1 251 1.4E-90 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CKQ55_RS09610 fa52b640b01961acea9607bbb3722b45 109 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 5.0E-32 T 29-03-2018 IPR024473 Transposase, IS4, N-terminal CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 SUPERFAMILY SSF50104 2 114 1.1E-47 T 29-03-2018 IPR008991 Translation protein SH3-like domain CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.534 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 Pfam PF01245 Ribosomal protein L19 3 113 7.8E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.4E-53 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS19750 254bfe400008fdac32ebb78507278a76 115 PIRSF PIRSF002191 1 115 1.5E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 Gene3D G3DSA:2.60.40.10 649 764 9.9E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 Gene3D G3DSA:3.20.20.300 32 375 2.2E-102 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 1.2E-98 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 SUPERFAMILY SSF51445 33 394 4.95E-97 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 Gene3D G3DSA:3.40.50.1700 380 648 1.6E-86 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 Pfam PF14310 Fibronectin type III-like domain 686 753 8.1E-22 T 29-03-2018 IPR026891 Fibronectin type III-like domain CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 SMART SM01217 685 754 2.0E-30 T 29-03-2018 IPR026891 Fibronectin type III-like domain CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 SUPERFAMILY SSF52279 395 464 3.53E-59 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 SUPERFAMILY SSF52279 495 651 3.53E-59 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 2.6E-21 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 2.6E-21 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 2.6E-21 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 2.6E-21 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 2.6E-21 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS21910 c6405cb6f13f621ce2ccbe0c0167b2c1 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 2.3E-62 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CKQ55_RS09940 571b33cef202731085c0168084b7cc31 299 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 296 1.5E-117 T 29-03-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 CKQ55_RS09940 571b33cef202731085c0168084b7cc31 299 SUPERFAMILY SSF51658 7 296 8.43E-59 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS09940 571b33cef202731085c0168084b7cc31 299 Gene3D G3DSA:3.20.20.150 1 298 7.3E-58 T 29-03-2018 CKQ55_RS09940 571b33cef202731085c0168084b7cc31 299 Hamap MF_01672 Inosose dehydratase [iolE]. 1 299 57.05 T 29-03-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 CKQ55_RS09940 571b33cef202731085c0168084b7cc31 299 Pfam PF01261 Xylose isomerase-like TIM barrel 36 251 1.2E-27 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 Gene3D G3DSA:3.30.450.40 257 424 1.5E-12 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 586 7.0E-49 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 583 1.1E-43 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 SUPERFAMILY SSF55781 309 425 6.11E-10 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 Gene3D G3DSA:3.30.70.270 425 592 4.4E-52 T 29-03-2018 CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 SUPERFAMILY SSF55073 432 588 5.34E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 SMART SM00267 416 588 5.4E-52 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 SUPERFAMILY SSF158472 207 254 7.19E-7 T 29-03-2018 CKQ55_RS30060 f9ca483443f9309822bebff99a6630a4 594 SMART SM00304 207 260 4.3E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 SUPERFAMILY SSF55874 465 583 3.14E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 Pfam PF00672 HAMP domain 177 224 1.1E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 497 583 1.4E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 SMART SM00387 494 587 1.6E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 SMART SM00304 176 228 8.3E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 SUPERFAMILY SSF158472 177 226 9.02E-6 T 29-03-2018 CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 PIRSF PIRSF003167 1 592 2.6E-187 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 Pfam PF07730 Histidine kinase 390 453 5.3E-19 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 Gene3D G3DSA:3.30.565.10 352 583 3.7E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS24515 8c214bebb8b57534853dd85c472f4435 592 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 121 4.0E-9 T 29-03-2018 IPR029095 NarX-like, N-terminal CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 SMART SM00116 272 320 0.5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 SMART SM00116 208 256 2.0 T 29-03-2018 IPR000644 CBS domain CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 Pfam PF00571 CBS domain 265 312 4.2E-6 T 29-03-2018 IPR000644 CBS domain CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 Pfam PF00571 CBS domain 199 256 4.0E-6 T 29-03-2018 IPR000644 CBS domain CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 Gene3D G3DSA:3.40.50.10490 3 197 7.1E-47 T 29-03-2018 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 Gene3D G3DSA:3.10.580.10 264 318 1.5E-10 T 29-03-2018 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 Gene3D G3DSA:3.10.580.10 198 263 2.5E-9 T 29-03-2018 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 SUPERFAMILY SSF54631 261 316 3.53E-9 T 29-03-2018 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 Pfam PF01380 SIS domain 39 169 7.8E-31 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 PIRSF PIRSF004692 1 321 2.4E-120 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.4E-126 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CKQ55_RS19180 8ae1212a225b18aa5062783424533613 321 SUPERFAMILY SSF53697 6 255 3.11E-53 T 29-03-2018 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 SMART SM01002 146 311 3.7E-82 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 1.2E-297 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 Gene3D G3DSA:3.40.50.720 195 377 1.9E-56 T 29-03-2018 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.4E-49 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 29-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 Gene3D G3DSA:3.40.50.720 1 194 5.0E-50 T 29-03-2018 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 SUPERFAMILY SSF51735 137 317 2.96E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 2.1E-74 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 SMART SM01003 4 137 2.6E-74 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 SUPERFAMILY SSF52283 1 168 1.02E-54 T 29-03-2018 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 1.1E-35 T 29-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CKQ55_RS25910 3e120c3d1e58008d3859b642b5b9f023 509 PIRSF PIRSF000203 1 508 8.7E-279 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CKQ55_RS28375 42907310dbb5f9ffe92d1601237affc8 127 Pfam PF03466 LysR substrate binding domain 1 126 4.4E-17 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS28375 42907310dbb5f9ffe92d1601237affc8 127 Gene3D G3DSA:3.40.190.10 1 102 6.0E-18 T 29-03-2018 CKQ55_RS28375 42907310dbb5f9ffe92d1601237affc8 127 SUPERFAMILY SSF53850 1 126 1.21E-16 T 29-03-2018 CKQ55_RS17990 0586cb8dbfe57c9d320301ddaf283fe8 786 SUPERFAMILY SSF141729 5 122 1.44E-12 T 29-03-2018 CKQ55_RS17990 0586cb8dbfe57c9d320301ddaf283fe8 786 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 267 277 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS17990 0586cb8dbfe57c9d320301ddaf283fe8 786 Pfam PF13954 PapC N-terminal domain 6 141 9.8E-18 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS17990 0586cb8dbfe57c9d320301ddaf283fe8 786 Pfam PF13953 PapC C-terminal domain 705 768 4.2E-11 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS17990 0586cb8dbfe57c9d320301ddaf283fe8 786 Pfam PF00577 Outer membrane usher protein 159 696 2.0E-88 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS12380 45273fb7477fbd635b7624398bfe1f35 276 Gene3D G3DSA:3.40.225.10 4 256 8.8E-50 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS12380 45273fb7477fbd635b7624398bfe1f35 276 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 2.7E-136 T 29-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 CKQ55_RS12380 45273fb7477fbd635b7624398bfe1f35 276 SMART SM01007 11 239 2.1E-31 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS12380 45273fb7477fbd635b7624398bfe1f35 276 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.906 T 29-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 CKQ55_RS12380 45273fb7477fbd635b7624398bfe1f35 276 SUPERFAMILY SSF53639 1 271 3.53E-73 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS12380 45273fb7477fbd635b7624398bfe1f35 276 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 2.6E-36 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 Pfam PF13407 Periplasmic binding protein domain 61 315 7.2E-35 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 SUPERFAMILY SSF53822 58 321 2.36E-33 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 SUPERFAMILY SSF47413 2 46 2.62E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 46 4.5E-9 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 SMART SM00354 3 56 4.0E-4 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 Gene3D G3DSA:1.10.260.40 3 57 1.0E-11 T 29-03-2018 CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 Gene3D G3DSA:3.40.50.2300 169 339 1.1E-19 T 29-03-2018 CKQ55_RS05115 fc0d6ec0cd845b6e989b83c1c1d291e7 339 Gene3D G3DSA:3.40.50.2300 59 168 1.3E-14 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 337 8.7E-73 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 Gene3D G3DSA:3.40.50.720 382 488 2.4E-13 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 SUPERFAMILY SSF51395 3 355 7.59E-102 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 619 6.8E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 SUPERFAMILY SSF51905 363 621 2.81E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 407 4.6E-8 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 603 617 4.6E-8 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 4.6E-8 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 Gene3D G3DSA:3.50.50.60 489 627 5.9E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 3.0E-14 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 487 3.0E-14 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 519 537 3.0E-14 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 602 618 3.0E-14 T 29-03-2018 CKQ55_RS08235 23296f4b698713dd3ade05f73cf04b95 677 Gene3D G3DSA:3.20.20.70 1 381 8.9E-111 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS24810 b13c5a4378ebca0896e4a3dd6bddc960 328 SUPERFAMILY SSF81345 6 323 3.92E-85 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS24810 b13c5a4378ebca0896e4a3dd6bddc960 328 Pfam PF01032 FecCD transport family 22 323 7.1E-87 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS24810 b13c5a4378ebca0896e4a3dd6bddc960 328 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 32.009 T 29-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 CKQ55_RS24810 b13c5a4378ebca0896e4a3dd6bddc960 328 Gene3D G3DSA:1.10.3470.10 7 328 1.2E-64 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 490 5.0E-37 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 SMART SM00267 330 496 7.1E-41 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 Gene3D G3DSA:3.30.450.20 48 238 1.6E-5 T 29-03-2018 CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 32 301 1.3E-84 T 29-03-2018 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 341 492 8.6E-36 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 SUPERFAMILY SSF55073 346 492 1.57E-33 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS29930 988fd5affdfa55b0594f41c96c00cfd7 498 Gene3D G3DSA:3.30.70.270 335 494 1.4E-35 T 29-03-2018 CKQ55_RS25575 11903d94f5b6c53ebcbdc9d57e10feca 394 Gene3D G3DSA:1.20.1250.20 5 187 4.4E-30 T 29-03-2018 CKQ55_RS25575 11903d94f5b6c53ebcbdc9d57e10feca 394 Pfam PF07690 Major Facilitator Superfamily 15 340 1.2E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS25575 11903d94f5b6c53ebcbdc9d57e10feca 394 Gene3D G3DSA:1.20.1250.20 191 391 7.3E-11 T 29-03-2018 CKQ55_RS25575 11903d94f5b6c53ebcbdc9d57e10feca 394 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 378 5.3E-124 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CKQ55_RS25575 11903d94f5b6c53ebcbdc9d57e10feca 394 SUPERFAMILY SSF103473 8 375 7.46E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS09065 48b137ca1c30f98286393f801bc42594 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 1.8E-59 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09065 48b137ca1c30f98286393f801bc42594 254 Gene3D G3DSA:2.30.30.370 1 32 1.8E-15 T 29-03-2018 CKQ55_RS09065 48b137ca1c30f98286393f801bc42594 254 Gene3D G3DSA:3.90.850.10 33 253 6.1E-73 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09065 48b137ca1c30f98286393f801bc42594 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 9.3E-118 T 29-03-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 CKQ55_RS09065 48b137ca1c30f98286393f801bc42594 254 SUPERFAMILY SSF56529 37 244 2.62E-73 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS24095 b17386dd99f9daa6002503b129f5abe6 114 Gene3D G3DSA:2.60.120.10 6 106 6.6E-41 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS24095 b17386dd99f9daa6002503b129f5abe6 114 SUPERFAMILY SSF51197 4 101 3.3E-32 T 29-03-2018 CKQ55_RS24095 b17386dd99f9daa6002503b129f5abe6 114 PIRSF PIRSF020632 3 113 2.3E-61 T 29-03-2018 IPR014510 Tellurite resistance predicted, YeaR CKQ55_RS24095 b17386dd99f9daa6002503b129f5abe6 114 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 2.9E-27 T 29-03-2018 IPR015392 Domain of unknown function DUF1971 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 1.7E-30 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 8.0E-10 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 SUPERFAMILY SSF51735 113 275 1.32E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 Gene3D G3DSA:3.40.50.720 138 311 5.2E-30 T 29-03-2018 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 SMART SM00829 11 325 6.1E-30 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 Gene3D G3DSA:3.90.180.10 3 137 6.5E-33 T 29-03-2018 CKQ55_RS11120 9eae9278afa9d2afb2ef1c85f08c8377 327 SUPERFAMILY SSF50129 8 142 8.33E-34 T 29-03-2018 IPR011032 GroES-like CKQ55_RS14960 8b4a4e43bd493a20b0aca5829d81b8f5 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.189 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS14960 8b4a4e43bd493a20b0aca5829d81b8f5 109 Pfam PF00581 Rhodanese-like domain 9 98 5.7E-16 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS14960 8b4a4e43bd493a20b0aca5829d81b8f5 109 SUPERFAMILY SSF52821 2 100 1.02E-28 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS14960 8b4a4e43bd493a20b0aca5829d81b8f5 109 SMART SM00450 7 102 1.6E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS14960 8b4a4e43bd493a20b0aca5829d81b8f5 109 Gene3D G3DSA:3.40.250.10 1 108 3.4E-27 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS16225 fbf74fcacfc710d1aeac92dde360d7e7 457 PIRSF PIRSF006304 2 452 2.1E-167 T 29-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CKQ55_RS16225 fbf74fcacfc710d1aeac92dde360d7e7 457 Pfam PF03611 PTS system sugar-specific permease component 8 385 8.0E-79 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS16225 fbf74fcacfc710d1aeac92dde360d7e7 457 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 9 412 7.7E-201 T 29-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CKQ55_RS01985 0dc907743123e18498963ec7f53bc91c 257 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01985 0dc907743123e18498963ec7f53bc91c 257 Gene3D G3DSA:3.40.50.300 12 214 1.4E-58 T 29-03-2018 CKQ55_RS01985 0dc907743123e18498963ec7f53bc91c 257 SMART SM00382 36 210 3.7E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01985 0dc907743123e18498963ec7f53bc91c 257 Pfam PF00005 ABC transporter 27 160 1.9E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS01985 0dc907743123e18498963ec7f53bc91c 257 SUPERFAMILY SSF52540 13 212 1.6E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20365 02be5b795d73a98b45aa4d6e8b491911 487 Pfam PF14559 Tetratricopeptide repeat 354 418 7.5E-8 T 29-03-2018 CKQ55_RS20365 02be5b795d73a98b45aa4d6e8b491911 487 Pfam PF01435 Peptidase family M48 79 259 8.7E-27 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CKQ55_RS20365 02be5b795d73a98b45aa4d6e8b491911 487 Gene3D G3DSA:3.30.2010.10 67 140 2.0E-16 T 29-03-2018 CKQ55_RS20365 02be5b795d73a98b45aa4d6e8b491911 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 40.989 T 29-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CKQ55_RS20365 02be5b795d73a98b45aa4d6e8b491911 487 Gene3D G3DSA:1.25.40.10 141 487 1.3E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20365 02be5b795d73a98b45aa4d6e8b491911 487 SUPERFAMILY SSF48452 310 427 1.79E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 SUPERFAMILY SSF51604 138 415 4.82E-84 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 SMART SM00922 184 284 2.9E-16 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 Gene3D G3DSA:3.20.20.120 144 413 1.3E-55 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 SUPERFAMILY SSF54826 7 136 2.69E-31 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 Gene3D G3DSA:3.30.390.10 8 143 5.2E-35 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 Pfam PF13378 Enolase C-terminal domain-like 188 404 1.3E-39 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18560 8c3a800a25c89c05d636d953a1137479 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 1.8E-8 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS25100 bc1f4fc00349f70067bdca969acb29ba 262 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS25100 bc1f4fc00349f70067bdca969acb29ba 262 Gene3D G3DSA:3.40.50.300 14 231 7.3E-54 T 29-03-2018 CKQ55_RS25100 bc1f4fc00349f70067bdca969acb29ba 262 SUPERFAMILY SSF52540 20 241 1.82E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25100 bc1f4fc00349f70067bdca969acb29ba 262 Pfam PF00005 ABC transporter 36 173 1.5E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS25100 bc1f4fc00349f70067bdca969acb29ba 262 SMART SM00382 45 224 1.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS07555 c8dffba7a87eb416e2c7514638ddec40 151 Gene3D G3DSA:3.10.129.10 1 149 1.0E-56 T 29-03-2018 CKQ55_RS07555 c8dffba7a87eb416e2c7514638ddec40 151 Pfam PF07977 FabA-like domain 17 141 1.4E-40 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS07555 c8dffba7a87eb416e2c7514638ddec40 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.6E-61 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS07555 c8dffba7a87eb416e2c7514638ddec40 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.792 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS07555 c8dffba7a87eb416e2c7514638ddec40 151 SUPERFAMILY SSF54637 7 146 9.92E-52 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 SUPERFAMILY SSF54292 3 106 1.07E-28 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 Gene3D G3DSA:1.10.1060.10 107 242 1.9E-26 T 29-03-2018 CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 4.7E-30 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 Gene3D G3DSA:3.10.20.30 1 106 1.8E-28 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 1.6E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.8E-96 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10615 ec5963ca1c729b4e9745a113c617546e 244 SUPERFAMILY SSF46548 107 229 4.36E-31 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS30645 8dcbb8bac84c6dd93277b88b708b3c32 101 PIRSF PIRSF003259 1 101 2.2E-50 T 29-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 CKQ55_RS30645 8dcbb8bac84c6dd93277b88b708b3c32 101 Pfam PF07178 TraL protein 9 100 4.1E-33 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CKQ55_RS30645 8dcbb8bac84c6dd93277b88b708b3c32 101 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 7 100 8.5E-22 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CKQ55_RS20975 b7a280b136113aa606172ef82c6159f6 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 1.4E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20975 b7a280b136113aa606172ef82c6159f6 228 Gene3D G3DSA:1.10.3720.10 3 224 5.8E-39 T 29-03-2018 CKQ55_RS20975 b7a280b136113aa606172ef82c6159f6 228 SUPERFAMILY SSF161098 7 205 1.28E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20975 b7a280b136113aa606172ef82c6159f6 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 8.2E-20 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS02075 97793354382eebd7c14e54fa84bc940e 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.787 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CKQ55_RS02075 97793354382eebd7c14e54fa84bc940e 60 SUPERFAMILY SSF158997 1 54 6.28E-19 T 29-03-2018 CKQ55_RS02075 97793354382eebd7c14e54fa84bc940e 60 Pfam PF03966 Trm112p-like protein 2 41 3.0E-8 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CKQ55_RS02075 97793354382eebd7c14e54fa84bc940e 60 Gene3D G3DSA:2.20.25.10 8 60 6.9E-17 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.9E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.9E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Gene3D G3DSA:3.50.50.60 1 125 7.1E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 SUPERFAMILY SSF56014 633 809 8.9E-47 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.0E-11 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.0E-11 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.0E-11 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.0E-11 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 2.6E-14 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 SUPERFAMILY SSF51905 2 189 3.0E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 1.1E-14 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.9E-14 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.9E-14 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.9E-14 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.9E-14 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Gene3D G3DSA:3.30.413.10 631 816 3.9E-36 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Gene3D G3DSA:3.40.50.720 126 312 1.2E-35 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 4.7E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 PIRSF PIRSF037149 1 835 0.0 T 29-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 SUPERFAMILY SSF55124 502 627 3.43E-31 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 SUPERFAMILY SSF51905 144 310 4.1E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Gene3D G3DSA:3.90.480.10 447 629 1.0E-6 T 29-03-2018 CKQ55_RS15110 31c899b788eb787c94fb378afc08feff 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 621 3.6E-10 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS31620 6398a13de77b96e1bed73be4000d72e7 242 SUPERFAMILY SSF54427 94 239 6.13E-33 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS31620 6398a13de77b96e1bed73be4000d72e7 242 Pfam PF04335 VirB8 protein 26 239 6.4E-35 T 29-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 351 5.0E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 SUPERFAMILY SSF55874 205 353 3.26E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 SMART SM00387 244 355 6.9E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 4.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 4.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 308 4.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 SMART SM00388 136 200 1.3E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 Gene3D G3DSA:3.30.565.10 206 355 2.0E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 Gene3D G3DSA:1.10.287.130 126 195 2.1E-9 T 29-03-2018 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 SMART SM00304 81 135 4.7E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 SUPERFAMILY SSF158472 82 132 5.62E-6 T 29-03-2018 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 SUPERFAMILY SSF47384 119 195 1.16E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS01465 c6758965221df3162db41a8c5a58a781 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 5.9E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 SUPERFAMILY SSF51735 464 636 1.01E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Pfam PF01842 ACT domain 324 376 8.0E-9 T 29-03-2018 IPR002912 ACT domain CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 SUPERFAMILY SSF55021 303 381 3.67E-23 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Gene3D G3DSA:3.40.1160.10 1 289 9.6E-64 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Gene3D G3DSA:3.30.360.10 636 794 6.3E-53 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Pfam PF00742 Homoserine dehydrogenase 614 811 9.3E-47 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 PIRSF PIRSF000727 1 818 0.0 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Gene3D G3DSA:3.40.50.720 465 635 5.1E-29 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 SUPERFAMILY SSF53633 1 296 7.02E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 SUPERFAMILY SSF55021 384 476 1.1E-21 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Gene3D G3DSA:3.30.70.260 290 384 3.5E-25 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 SUPERFAMILY SSF55347 614 798 1.24E-51 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 7.0E-151 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Gene3D G3DSA:3.30.70.260 385 464 1.9E-18 T 29-03-2018 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Pfam PF00696 Amino acid kinase family 2 284 2.3E-45 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.1E-30 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS08670 1b508e615360cb66c494b0fbfba52793 820 Pfam PF13840 ACT domain 394 453 1.0E-8 T 29-03-2018 IPR027795 GATS-like ACT domain CKQ55_RS26705 40c6449a7504b9c66933b877753ed532 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 260 1.1E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS26705 40c6449a7504b9c66933b877753ed532 280 SUPERFAMILY SSF53850 28 265 7.62E-37 T 29-03-2018 CKQ55_RS26705 40c6449a7504b9c66933b877753ed532 280 Gene3D G3DSA:3.40.190.10 157 268 1.5E-11 T 29-03-2018 CKQ55_RS26705 40c6449a7504b9c66933b877753ed532 280 Gene3D G3DSA:3.40.190.10 27 156 6.5E-19 T 29-03-2018 CKQ55_RS26705 40c6449a7504b9c66933b877753ed532 280 SMART SM00062 31 263 1.1E-25 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS17770 42baf2691428fedc0c34babe6667f1d0 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 478 8.8E-82 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CKQ55_RS17770 42baf2691428fedc0c34babe6667f1d0 492 Pfam PF02321 Outer membrane efflux protein 298 465 3.1E-13 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS17770 42baf2691428fedc0c34babe6667f1d0 492 Pfam PF02321 Outer membrane efflux protein 72 269 1.3E-22 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS17770 42baf2691428fedc0c34babe6667f1d0 492 Gene3D G3DSA:1.20.1600.10 3 484 4.3E-68 T 29-03-2018 CKQ55_RS17770 42baf2691428fedc0c34babe6667f1d0 492 SUPERFAMILY SSF56954 6 480 4.84E-79 T 29-03-2018 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 3.4E-155 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 SUPERFAMILY SSF51998 175 698 6.71E-184 T 29-03-2018 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 29-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 4.5E-139 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 1.4E-27 T 29-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 Gene3D G3DSA:3.20.70.20 83 700 1.8E-156 T 29-03-2018 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 99 171 3.8E-11 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 SUPERFAMILY SSF48168 15 174 1.57E-57 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 1.3E-32 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 1.3E-32 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 1.3E-32 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 1.3E-32 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 1.3E-32 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19375 35a692a0fc2a026b5b36ec704dcabf27 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 1.3E-32 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS28145 a96877c59cce02372f37769573c9a2da 246 Pfam PF00775 Dioxygenase 48 231 4.2E-54 T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CKQ55_RS28145 a96877c59cce02372f37769573c9a2da 246 Gene3D G3DSA:2.60.130.10 4 240 2.9E-58 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CKQ55_RS28145 a96877c59cce02372f37769573c9a2da 246 SUPERFAMILY SSF49482 11 240 4.71E-77 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CKQ55_RS28145 a96877c59cce02372f37769573c9a2da 246 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 82 110 - T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CKQ55_RS28145 a96877c59cce02372f37769573c9a2da 246 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 18 239 1.2E-109 T 29-03-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 CKQ55_RS28145 a96877c59cce02372f37769573c9a2da 246 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 44 5.8E-15 T 29-03-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 Pfam PF17192 MukF middle domain 121 281 4.3E-84 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 Gene3D G3DSA:1.10.10.10 24 116 1.6E-40 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.169 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 SUPERFAMILY SSF140570 119 281 7.85E-77 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 PIRSF PIRSF018282 1 440 6.9E-243 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 SUPERFAMILY SSF46785 8 118 4.84E-49 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 Pfam PF03882 MukF winged-helix domain 3 117 1.4E-57 T 29-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CKQ55_RS02050 bd52ceafcf9e89904b3b404152bbe2b5 440 Pfam PF17193 MukF C-terminal domain 283 440 1.7E-80 T 29-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 Pfam PF03466 LysR substrate binding domain 86 274 5.8E-28 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 Gene3D G3DSA:3.40.190.10 83 175 3.1E-20 T 29-03-2018 CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 SUPERFAMILY SSF53850 80 274 1.29E-25 T 29-03-2018 CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 SUPERFAMILY SSF46785 1 109 3.32E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 Gene3D G3DSA:1.10.10.10 1 82 3.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26640 5534d2b40a59fadd642ea92f3a386b28 278 Gene3D G3DSA:3.40.190.10 176 251 5.0E-6 T 29-03-2018 CKQ55_RS22270 4cc00af7eae1a266a6a01163e06ed19c 347 PIRSF PIRSF018494 1 347 3.0E-151 T 29-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria CKQ55_RS22270 4cc00af7eae1a266a6a01163e06ed19c 347 Pfam PF04860 Phage portal protein 96 325 8.1E-11 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CKQ55_RS22270 4cc00af7eae1a266a6a01163e06ed19c 347 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 55 335 4.3E-71 T 29-03-2018 IPR006430 Phage portal protein PBSX family CKQ55_RS00570 f296493224bc9087925a928af7244464 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 9.1E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS00570 f296493224bc9087925a928af7244464 261 SUPERFAMILY SSF161098 3 254 2.15E-54 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS00570 f296493224bc9087925a928af7244464 261 Gene3D G3DSA:1.10.3720.10 5 258 4.4E-37 T 29-03-2018 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 Gene3D G3DSA:1.20.58.340 139 258 1.2E-16 T 29-03-2018 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 Pfam PF01544 CorA-like Mg2+ transporter protein 40 323 1.3E-60 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 SUPERFAMILY SSF143865 7 255 1.83E-50 T 29-03-2018 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 SUPERFAMILY SSF144083 264 324 2.22E-13 T 29-03-2018 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 69.891 T 29-03-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 Gene3D G3DSA:3.30.460.20 1 138 3.3E-19 T 29-03-2018 CKQ55_RS28700 4abad7a6da94f627f021292fa7ec1e3e 327 Gene3D G3DSA:1.20.58.340 259 327 1.1E-16 T 29-03-2018 CKQ55_RS24935 631ac5043c8d660f55bfaf012b1a003c 424 SUPERFAMILY SSF101960 12 421 7.06E-112 T 29-03-2018 CKQ55_RS24935 631ac5043c8d660f55bfaf012b1a003c 424 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 410 2.5E-86 T 29-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CKQ55_RS24935 631ac5043c8d660f55bfaf012b1a003c 424 Pfam PF01458 Uncharacterized protein family (UPF0051) 171 394 2.7E-70 T 29-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 1.3E-27 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 4.1E-36 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 SUPERFAMILY SSF56059 104 323 8.31E-70 T 29-03-2018 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 SMART SM01210 330 424 3.6E-52 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Gene3D G3DSA:3.40.50.20 2 95 7.3E-38 T 29-03-2018 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 2.3E-187 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Gene3D G3DSA:3.30.1490.20 135 189 5.9E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.445 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Gene3D G3DSA:3.90.600.10 330 425 4.6E-33 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Gene3D G3DSA:3.30.470.20 191 329 1.9E-62 T 29-03-2018 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.5E-84 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 SUPERFAMILY SSF51246 329 424 4.55E-31 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 SMART SM01209 103 296 5.3E-144 T 29-03-2018 CKQ55_RS11440 3c133222b092dcd94c2f9439c62e0375 430 SUPERFAMILY SSF52440 1 103 1.58E-37 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS09455 ceec9ff6ed6d6fbe8facb13ccf0934c9 374 SMART SM00558 92 215 3.0E-6 T 29-03-2018 IPR003347 JmjC domain CKQ55_RS09455 ceec9ff6ed6d6fbe8facb13ccf0934c9 374 Pfam PF08007 Cupin superfamily protein 10 310 1.4E-99 T 29-03-2018 IPR003347 JmjC domain CKQ55_RS09455 ceec9ff6ed6d6fbe8facb13ccf0934c9 374 SUPERFAMILY SSF51197 6 292 1.65E-72 T 29-03-2018 CKQ55_RS09455 ceec9ff6ed6d6fbe8facb13ccf0934c9 374 Gene3D G3DSA:2.60.120.650 4 206 2.3E-24 T 29-03-2018 CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 SUPERFAMILY SSF103515 332 639 1.7E-31 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 Pfam PF03797 Autotransporter beta-domain 369 617 1.5E-26 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 Gene3D G3DSA:3.90.190.10 38 217 4.5E-20 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 168 178 - T 29-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 SMART SM00869 366 627 2.0E-21 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 Pfam PF13350 Tyrosine phosphatase family 30 273 1.2E-60 T 29-03-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 SUPERFAMILY SSF52799 32 272 2.97E-48 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like CKQ55_RS16965 7a605d04c5966d5645bfc399b8afa27c 639 Gene3D G3DSA:2.40.128.130 325 639 6.0E-29 T 29-03-2018 CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 SUPERFAMILY SSF46785 24 95 4.77E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 SUPERFAMILY SSF55781 89 267 4.91E-50 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 SMART SM00346 23 112 3.4E-25 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 Gene3D G3DSA:3.30.450.40 94 268 4.4E-55 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 Gene3D G3DSA:1.10.10.10 16 93 5.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 20 264 2.9E-96 T 29-03-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 Pfam PF09339 IclR helix-turn-helix domain 25 73 3.0E-13 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS25965 d55148c9f780bee2e07d130e39bd5195 268 Pfam PF01614 Bacterial transcriptional regulator 139 264 1.2E-32 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS09920 c61b3669c048afb93717501317270e4a 274 Gene3D G3DSA:3.60.21.10 1 259 3.0E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS09920 c61b3669c048afb93717501317270e4a 274 SUPERFAMILY SSF56300 1 262 1.25E-56 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS09920 c61b3669c048afb93717501317270e4a 274 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 5.3E-17 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS09920 c61b3669c048afb93717501317270e4a 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 254 35.494 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CKQ55_RS22360 da3013c99febe2e0d46f4190816fb2e0 649 Pfam PF08757 CotH kinase protein 294 641 9.5E-22 T 29-03-2018 IPR014867 Spore coat protein CotH CKQ55_RS22360 da3013c99febe2e0d46f4190816fb2e0 649 Gene3D G3DSA:1.10.287.500 106 647 4.8E-4 T 29-03-2018 CKQ55_RS09575 471ea22de234d1f9aefb1a3ce669f8ec 82 Gene3D G3DSA:3.30.160.130 13 81 1.0E-37 T 29-03-2018 CKQ55_RS09575 471ea22de234d1f9aefb1a3ce669f8ec 82 SUPERFAMILY SSF54786 18 81 9.42E-29 T 29-03-2018 CKQ55_RS09575 471ea22de234d1f9aefb1a3ce669f8ec 82 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 15 81 7.0E-21 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CKQ55_RS09575 471ea22de234d1f9aefb1a3ce669f8ec 82 Pfam PF06006 Bacterial protein of unknown function (DUF905) 15 81 2.6E-35 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 1.6E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 1.6E-5 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 Gene3D G3DSA:3.40.350.10 1 171 6.4E-47 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 SUPERFAMILY SSF53092 2 174 1.57E-51 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 SUPERFAMILY SSF55920 175 433 1.27E-85 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 Gene3D G3DSA:3.90.230.10 172 438 9.1E-87 T 29-03-2018 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 126 2.0E-34 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 SMART SM01011 1 136 3.4E-56 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CKQ55_RS17340 9f31a8d595d37a7c913ceeab2ff6c7f7 438 Pfam PF00557 Metallopeptidase family M24 181 411 3.5E-65 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 SUPERFAMILY SSF48452 142 253 1.0E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 Pfam PF13432 Tetratricopeptide repeat 159 213 2.5E-7 T 29-03-2018 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 Pfam PF16331 TolA binding protein trimerisation 37 110 4.5E-24 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 Pfam PF13174 Tetratricopeptide repeat 217 249 4.1E-6 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 Gene3D G3DSA:1.20.5.50 35 81 4.4E-5 T 29-03-2018 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 Gene3D G3DSA:1.25.40.10 138 263 3.5E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 262 20.043 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CKQ55_RS03565 782177c775ae6afd493c50fdc5abe93a 263 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 143 259 6.5E-40 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 SMART SM01329 6 355 4.8E-199 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 Gene3D G3DSA:3.40.718.10 1 363 6.0E-131 T 29-03-2018 CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 1.1E-168 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 SUPERFAMILY SSF53659 2 360 4.5E-121 T 29-03-2018 CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 7.6E-138 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS08220 fb9ab2a8a4c22899c15fe9db41ed6401 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.558 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CKQ55_RS15315 d4f6f9762a8b2d4a22c45a34a379b9e5 209 Pfam PF00297 Ribosomal protein L3 34 182 4.3E-14 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15315 d4f6f9762a8b2d4a22c45a34a379b9e5 209 Gene3D G3DSA:4.10.960.10 57 165 7.9E-35 T 29-03-2018 CKQ55_RS15315 d4f6f9762a8b2d4a22c45a34a379b9e5 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 3.7E-92 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15315 d4f6f9762a8b2d4a22c45a34a379b9e5 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site CKQ55_RS15315 d4f6f9762a8b2d4a22c45a34a379b9e5 209 SUPERFAMILY SSF50447 1 208 3.62E-80 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS15315 d4f6f9762a8b2d4a22c45a34a379b9e5 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.681 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS26015 40ae3d6bee26ade1676a0107862321ea 316 Gene3D G3DSA:3.10.520.10 7 302 5.5E-49 T 29-03-2018 CKQ55_RS26015 40ae3d6bee26ade1676a0107862321ea 316 SUPERFAMILY SSF143631 6 297 1.78E-84 T 29-03-2018 IPR003374 ApbE-like domain CKQ55_RS26015 40ae3d6bee26ade1676a0107862321ea 316 PIRSF PIRSF006268 1 307 9.5E-88 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CKQ55_RS26015 40ae3d6bee26ade1676a0107862321ea 316 Pfam PF02424 ApbE family 14 285 2.3E-73 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 SUPERFAMILY SSF47413 2 71 2.25E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 Gene3D G3DSA:2.60.120.10 73 176 2.6E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 SMART SM00530 10 65 8.7E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 SUPERFAMILY SSF51182 50 175 1.95E-21 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 Pfam PF07883 Cupin domain 103 170 3.5E-7 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 Pfam PF01381 Helix-turn-helix 11 63 5.9E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS28075 10a6d0d5354111f2519df419c04d2af9 176 Gene3D G3DSA:1.10.260.40 2 72 2.5E-16 T 29-03-2018 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 SUPERFAMILY SSF140490 334 429 1.28E-31 T 29-03-2018 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 1.3E-50 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 Pfam PF10531 SLBB domain 253 295 5.6E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 SMART SM00928 336 381 2.0E-21 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 SUPERFAMILY SSF142019 13 247 2.09E-86 T 29-03-2018 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 1.4E-203 T 29-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.9E-26 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21135 8d642b0225b78ee5c8e9102bb9ff11a8 445 SUPERFAMILY SSF142984 248 330 1.7E-20 T 29-03-2018 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 PIRSF PIRSF002401 1 376 3.6E-141 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 8.9E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 Gene3D G3DSA:2.70.210.12 2 156 1.5E-58 T 29-03-2018 IPR006169 GTP1/OBG domain CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.34 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 2.0E-149 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 SUPERFAMILY SSF52540 152 334 1.07E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 SUPERFAMILY SSF82051 2 157 1.09E-56 T 29-03-2018 IPR006169 GTP1/OBG domain CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 Pfam PF01018 GTP1/OBG 4 157 3.4E-59 T 29-03-2018 IPR006169 GTP1/OBG domain CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 Gene3D G3DSA:3.40.50.300 159 373 4.4E-32 T 29-03-2018 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS16010 a3307a43fb558bd022755f028b4e43ca 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS21225 968ec5d36d25d507a5f75f253211dbab 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 429 29.952 T 29-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CKQ55_RS21225 968ec5d36d25d507a5f75f253211dbab 431 SUPERFAMILY SSF56322 25 427 3.53E-95 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS21225 968ec5d36d25d507a5f75f253211dbab 431 Gene3D G3DSA:3.60.120.10 1 429 8.5E-89 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS21225 968ec5d36d25d507a5f75f253211dbab 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 92 426 3.0E-102 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CKQ55_RS21225 968ec5d36d25d507a5f75f253211dbab 431 Pfam PF00425 chorismate binding enzyme 170 419 3.9E-61 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Gene3D G3DSA:3.30.70.20 2 22 0.056 T 29-03-2018 CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Gene3D G3DSA:3.30.70.20 23 54 1.6E-7 T 29-03-2018 CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Gene3D G3DSA:3.30.70.20 85 124 2.0E-13 T 29-03-2018 CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Pfam PF12800 4Fe-4S binding domain 10 22 0.073 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Gene3D G3DSA:3.30.70.20 125 151 0.078 T 29-03-2018 CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 SUPERFAMILY SSF54862 3 148 1.74E-40 T 29-03-2018 CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Gene3D G3DSA:3.30.70.20 55 84 6.5E-11 T 29-03-2018 CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 Pfam PF13247 4Fe-4S dicluster domain 47 135 9.2E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS24305 26e8975280a3aa9c6f4dd8da7dd7136b 158 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS17480 530f6e484a23fbfff414bfd8de94423b 182 Pfam PF00293 NUDIX domain 31 161 3.7E-18 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS17480 530f6e484a23fbfff414bfd8de94423b 182 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 33.523 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CKQ55_RS17480 530f6e484a23fbfff414bfd8de94423b 182 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 5.2E-46 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CKQ55_RS17480 530f6e484a23fbfff414bfd8de94423b 182 Gene3D G3DSA:3.90.79.10 31 181 6.1E-25 T 29-03-2018 CKQ55_RS17480 530f6e484a23fbfff414bfd8de94423b 182 SUPERFAMILY SSF55811 4 168 2.03E-48 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS17480 530f6e484a23fbfff414bfd8de94423b 182 PIRSF PIRSF018427 1 180 1.5E-54 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 5.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 5.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 6 291 4.6E-120 T 29-03-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 Pfam PF07883 Cupin domain 38 99 5.6E-8 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 Gene3D G3DSA:1.10.10.60 188 244 3.9E-7 T 29-03-2018 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 Pfam PF12833 Helix-turn-helix domain 212 290 6.3E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 Gene3D G3DSA:1.10.10.60 245 292 5.7E-14 T 29-03-2018 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 SUPERFAMILY SSF51182 41 123 1.3E-10 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 SMART SM00342 206 289 1.2E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 Gene3D G3DSA:2.60.120.280 14 177 5.5E-17 T 29-03-2018 CKQ55_RS09100 5b06eaa0a99b550869924440b340b8e9 296 SUPERFAMILY SSF46689 244 291 1.25E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Pfam PF04052 TolB amino-terminal domain 23 121 3.1E-33 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 1.4E-157 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 SUPERFAMILY SSF52964 28 161 1.57E-40 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Gene3D G3DSA:2.130.10.10 199 257 4.8E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 SUPERFAMILY SSF69304 155 428 1.05E-54 T 29-03-2018 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.68 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Gene3D G3DSA:3.40.50.10070 22 164 1.2E-39 T 29-03-2018 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Gene3D G3DSA:2.130.10.150 258 429 2.9E-34 T 29-03-2018 CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0032 T 29-03-2018 IPR011659 WD40-like Beta Propeller CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Pfam PF07676 WD40-like Beta Propeller Repeat 203 223 0.0014 T 29-03-2018 IPR011659 WD40-like Beta Propeller CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 2.5E-11 T 29-03-2018 IPR011659 WD40-like Beta Propeller CKQ55_RS03575 cc491bcdb9821fd4836f24fce8e37547 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.2E-9 T 29-03-2018 IPR011659 WD40-like Beta Propeller CKQ55_RS27940 f120b34726c6087fb3391a356551dd62 86 SUPERFAMILY SSF56935 10 84 1.92E-9 T 29-03-2018 CKQ55_RS27940 f120b34726c6087fb3391a356551dd62 86 Gene3D G3DSA:2.40.160.10 2 85 1.3E-7 T 29-03-2018 CKQ55_RS20475 1bb0f2f94670ddb9b25907691a476f1d 267 PIRSF PIRSF012294 1 255 2.3E-108 T 29-03-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS20475 1bb0f2f94670ddb9b25907691a476f1d 267 Pfam PF01923 Cobalamin adenosyltransferase 95 246 1.7E-12 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CKQ55_RS20475 1bb0f2f94670ddb9b25907691a476f1d 267 SUPERFAMILY SSF89028 93 249 1.28E-12 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CKQ55_RS20475 1bb0f2f94670ddb9b25907691a476f1d 267 Gene3D G3DSA:1.20.1200.10 94 254 1.1E-16 T 29-03-2018 CKQ55_RS27825 3077ae994227615797d36bddffd68e45 105 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 44 103 4.5E-7 T 29-03-2018 IPR009387 Toxin HigB-2 CKQ55_RS27825 3077ae994227615797d36bddffd68e45 105 PIRSF PIRSF039032 1 105 4.0E-41 T 29-03-2018 IPR009387 Toxin HigB-2 CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 Pfam PF03928 Haem-degrading 202 327 7.9E-26 T 29-03-2018 IPR005624 Haem-degrading CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 PIRSF PIRSF036411 1 333 5.3E-91 T 29-03-2018 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 Pfam PF01923 Cobalamin adenosyltransferase 3 166 1.3E-53 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 Gene3D G3DSA:1.20.1200.10 12 184 4.0E-51 T 29-03-2018 CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 177 3.0E-49 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 124 1.0E-52 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 SUPERFAMILY SSF143744 197 330 2.22E-36 T 29-03-2018 CKQ55_RS18210 ab552a5e7fbae7960138ce618fc2a905 336 SUPERFAMILY SSF89028 1 174 2.75E-53 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CKQ55_RS15015 a28777376e1cd5fc83ba77a739436237 709 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 29-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CKQ55_RS15015 a28777376e1cd5fc83ba77a739436237 709 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 20 696 0.0 T 29-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 SUPERFAMILY SSF55021 6 56 5.83E-9 T 29-03-2018 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.6E-130 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PIRSF PIRSF036480 4 280 8.0E-113 T 29-03-2018 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.007 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 5.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 5.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 5.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 5.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 5.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 5.4E-70 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 SUPERFAMILY SSF53328 86 279 9.81E-60 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 Gene3D G3DSA:3.40.50.170 81 277 2.1E-52 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 Pfam PF01842 ACT domain 8 67 3.0E-7 T 29-03-2018 IPR002912 ACT domain CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 Pfam PF00551 Formyl transferase 86 262 1.4E-53 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS24575 78aa507e213c40b50d0113a2a818a178 280 Gene3D G3DSA:3.30.70.260 5 80 2.8E-8 T 29-03-2018 CKQ55_RS21300 a469da6c7c35ef3690ca30854e941ca0 180 SUPERFAMILY SSF56925 32 177 6.98E-9 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS21300 a469da6c7c35ef3690ca30854e941ca0 180 Gene3D G3DSA:2.40.160.10 10 180 1.8E-10 T 29-03-2018 CKQ55_RS21300 a469da6c7c35ef3690ca30854e941ca0 180 Pfam PF07437 YfaZ precursor 1 180 4.6E-81 T 29-03-2018 IPR009998 YfaZ CKQ55_RS07010 95c0fcb42cbc428a79320510cc55ba50 464 PIRSF PIRSF002744 1 463 3.9E-100 T 29-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 CKQ55_RS07010 95c0fcb42cbc428a79320510cc55ba50 464 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 16 438 1.7E-49 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CKQ55_RS00545 7e9ecaa00a0b90f46679628135de84e1 373 SMART SM00558 92 215 1.3E-8 T 29-03-2018 IPR003347 JmjC domain CKQ55_RS00545 7e9ecaa00a0b90f46679628135de84e1 373 SUPERFAMILY SSF51197 7 292 1.79E-74 T 29-03-2018 CKQ55_RS00545 7e9ecaa00a0b90f46679628135de84e1 373 Gene3D G3DSA:2.60.120.650 3 208 7.1E-28 T 29-03-2018 CKQ55_RS00545 7e9ecaa00a0b90f46679628135de84e1 373 Pfam PF08007 Cupin superfamily protein 10 309 7.4E-104 T 29-03-2018 IPR003347 JmjC domain CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 Pfam PF03466 LysR substrate binding domain 89 293 4.4E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 Gene3D G3DSA:3.40.190.10 182 265 7.7E-18 T 29-03-2018 CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 SUPERFAMILY SSF53850 90 297 2.17E-40 T 29-03-2018 CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 Gene3D G3DSA:3.40.190.10 90 181 9.1E-24 T 29-03-2018 CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 SUPERFAMILY SSF46785 3 112 9.7E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 Gene3D G3DSA:1.10.10.10 1 85 1.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.8E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20675 ad6c3c403fb7368ca149b4ab77f1eaec 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 Pfam PF00563 EAL domain 172 388 2.5E-49 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 SUPERFAMILY SSF54975 1 131 1.44E-27 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 Gene3D G3DSA:3.20.20.450 97 391 9.0E-52 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 SUPERFAMILY SSF141868 171 388 1.83E-51 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 SMART SM01034 2 93 6.8E-29 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 Pfam PF04940 Sensors of blue-light using FAD 2 91 6.5E-23 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CKQ55_RS26330 bb6f7b2f5ab22433bc577d6acc964300 402 SMART SM00052 150 393 1.7E-35 T 29-03-2018 IPR001633 EAL domain CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 69 83 - T 29-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 Gene3D G3DSA:1.20.1250.20 9 205 8.1E-26 T 29-03-2018 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 108 130 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 150 168 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 289 315 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 320 339 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 265 286 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 351 371 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 73 102 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 PRINTS PR00174 LacY proton/sugar symporter family signature 219 247 7.6E-98 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 Gene3D G3DSA:1.20.1250.20 211 415 5.4E-20 T 29-03-2018 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 Pfam PF01306 LacY proton/sugar symporter 7 411 6.0E-213 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 SUPERFAMILY SSF103473 9 407 2.75E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 12 406 3.1E-204 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS26310 e8acf9c0b147e0e6028062a757df81e7 416 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 285 299 - T 29-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 Gene3D G3DSA:3.80.30.20 144 381 1.1E-52 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 4.8E-29 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 SMART SM00729 147 367 3.5E-64 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.7E-220 T 29-03-2018 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 Pfam PF04055 Radical SAM superfamily 151 325 4.4E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 SUPERFAMILY SSF102114 127 372 8.24E-64 T 29-03-2018 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.876 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 Pfam PF01938 TRAM domain 378 440 2.4E-19 T 29-03-2018 IPR002792 TRAM domain CKQ55_RS04040 50f213838dddc25056cb84fcd20a3935 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.3E-158 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CKQ55_RS16945 3baafd1c7f6aeb665cf08e04f66fc2e2 186 SUPERFAMILY SSF52833 16 171 1.12E-10 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS16945 3baafd1c7f6aeb665cf08e04f66fc2e2 186 Pfam PF13462 Thioredoxin 18 167 1.3E-5 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS16945 3baafd1c7f6aeb665cf08e04f66fc2e2 186 Gene3D G3DSA:3.40.30.10 6 185 5.3E-18 T 29-03-2018 CKQ55_RS21465 23c3126c5d1f842cb738b041e8926f43 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 158 8.1E-49 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS21465 23c3126c5d1f842cb738b041e8926f43 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 3.9E-52 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS21465 23c3126c5d1f842cb738b041e8926f43 165 PIRSF PIRSF028301 1 164 5.7E-51 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 Gene3D G3DSA:3.30.390.10 1 115 2.6E-27 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 112 6.3E-25 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 Gene3D G3DSA:3.20.20.120 116 321 7.7E-40 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 SUPERFAMILY SSF54826 2 112 1.04E-33 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 SMART SM00922 130 223 7.3E-19 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 SUPERFAMILY SSF51604 116 310 1.01E-50 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS29270 e584b5b03251a2b537468d7bdf5ef6d8 321 Pfam PF13378 Enolase C-terminal domain-like 133 317 2.1E-23 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS27670 b2942572a8ebdff0ad7b28bca14ee507 314 SUPERFAMILY SSF161098 94 291 1.09E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27670 b2942572a8ebdff0ad7b28bca14ee507 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 307 4.0E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27670 b2942572a8ebdff0ad7b28bca14ee507 314 Gene3D G3DSA:1.10.3720.10 2 296 1.9E-30 T 29-03-2018 CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 Gene3D G3DSA:3.40.630.10 1 274 3.1E-60 T 29-03-2018 CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 SUPERFAMILY SSF55031 174 270 2.24E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 66 75 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 Pfam PF01546 Peptidase family M20/M25/M40 67 366 6.4E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 SUPERFAMILY SSF53187 3 173 2.29E-55 T 29-03-2018 CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 SUPERFAMILY SSF53187 284 368 2.29E-55 T 29-03-2018 CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 6 357 1.3E-65 T 29-03-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CKQ55_RS27035 45e47648db66c67e4737a20e84432f30 370 Pfam PF07687 Peptidase dimerisation domain 170 271 2.6E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25970 de4e4a5c94723483994c1ee7b15ac76d 228 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 29-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS25970 de4e4a5c94723483994c1ee7b15ac76d 228 SUPERFAMILY SSF100950 2 220 1.88E-78 T 29-03-2018 CKQ55_RS25970 de4e4a5c94723483994c1ee7b15ac76d 228 Gene3D G3DSA:3.40.1080.10 2 223 1.3E-80 T 29-03-2018 CKQ55_RS25970 de4e4a5c94723483994c1ee7b15ac76d 228 Pfam PF01144 Coenzyme A transferase 7 217 3.6E-70 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS25970 de4e4a5c94723483994c1ee7b15ac76d 228 SMART SM00882 6 219 2.8E-81 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS25970 de4e4a5c94723483994c1ee7b15ac76d 228 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 1.9E-117 T 29-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CKQ55_RS31640 be044edbf90e0de0857e650605d2cd6a 344 Gene3D G3DSA:3.40.50.300 98 323 2.5E-8 T 29-03-2018 CKQ55_RS31640 be044edbf90e0de0857e650605d2cd6a 344 Pfam PF00437 Type II/IV secretion system protein 26 284 2.9E-39 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS31640 be044edbf90e0de0857e650605d2cd6a 344 Gene3D G3DSA:3.30.450.90 10 97 1.8E-17 T 29-03-2018 CKQ55_RS31640 be044edbf90e0de0857e650605d2cd6a 344 SUPERFAMILY SSF52540 23 322 2.93E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31640 be044edbf90e0de0857e650605d2cd6a 344 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 26 330 2.2E-85 T 29-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 Gene3D G3DSA:1.20.1080.10 1 231 6.4E-71 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.847 T 29-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 9.1E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 9.1E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 9.1E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 9.1E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 9.1E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 9.1E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 2.4E-63 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 Pfam PF00230 Major intrinsic protein 2 223 5.7E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS02290 ef7602759d9cc7eb75c1b0856cd4efec 231 SUPERFAMILY SSF81338 2 227 1.96E-67 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS13325 e880a38dc7d923cf87e072be766e551c 103 SUPERFAMILY SSF52794 1 101 7.32E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS13325 e880a38dc7d923cf87e072be766e551c 103 Gene3D G3DSA:3.40.50.2300 2 103 5.7E-36 T 29-03-2018 CKQ55_RS13325 e880a38dc7d923cf87e072be766e551c 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 1.0E-19 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS16885 2f7dc5cd467ba5dc5f73a54640b48d39 387 Gene3D G3DSA:1.20.1090.10 184 387 1.5E-41 T 29-03-2018 CKQ55_RS16885 2f7dc5cd467ba5dc5f73a54640b48d39 387 Gene3D G3DSA:3.40.50.1970 9 183 3.6E-42 T 29-03-2018 CKQ55_RS16885 2f7dc5cd467ba5dc5f73a54640b48d39 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS16885 2f7dc5cd467ba5dc5f73a54640b48d39 387 SUPERFAMILY SSF56796 1 385 1.57E-107 T 29-03-2018 CKQ55_RS16885 2f7dc5cd467ba5dc5f73a54640b48d39 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 1.6E-92 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS16885 2f7dc5cd467ba5dc5f73a54640b48d39 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS18445 3195c7a69d4be12a9a2fc5e8f630a359 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 1.0E-7 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CKQ55_RS18445 3195c7a69d4be12a9a2fc5e8f630a359 366 Gene3D G3DSA:3.40.50.150 176 357 2.6E-21 T 29-03-2018 CKQ55_RS18445 3195c7a69d4be12a9a2fc5e8f630a359 366 PIRSF PIRSF028774 1 360 2.0E-191 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CKQ55_RS18445 3195c7a69d4be12a9a2fc5e8f630a359 366 SUPERFAMILY SSF53335 184 296 2.06E-12 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS18445 3195c7a69d4be12a9a2fc5e8f630a359 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 86.833 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 2.2E-5 T 29-03-2018 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 2.2E-5 T 29-03-2018 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 2.2E-5 T 29-03-2018 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 6.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 6.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 6.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 6.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 Gene3D G3DSA:1.10.40.30 419 468 3.5E-17 T 29-03-2018 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 Gene3D G3DSA:1.20.200.10 142 418 7.9E-71 T 29-03-2018 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 Pfam PF10415 Fumarase C C-terminus 411 464 2.4E-16 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 Pfam PF00206 Lyase 13 345 6.6E-110 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 1.7E-263 T 29-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 SUPERFAMILY SSF48557 1 458 4.86E-144 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS10735 664487490442ad2f65fc9a968e3ddbf2 478 Gene3D G3DSA:1.10.275.10 3 141 2.6E-53 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS13030 f4d471831361eebf9a43bedc8b486d00 394 Pfam PF07690 Major Facilitator Superfamily 11 343 8.3E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS13030 f4d471831361eebf9a43bedc8b486d00 394 Gene3D G3DSA:1.20.1250.20 2 194 7.9E-33 T 29-03-2018 CKQ55_RS13030 f4d471831361eebf9a43bedc8b486d00 394 Gene3D G3DSA:1.20.1250.20 198 393 1.7E-11 T 29-03-2018 CKQ55_RS13030 f4d471831361eebf9a43bedc8b486d00 394 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 392 37.788 T 29-03-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 CKQ55_RS13030 f4d471831361eebf9a43bedc8b486d00 394 SUPERFAMILY SSF103473 3 386 2.49E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13650 33d87882f79514a6083065b1e71b3407 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS13650 33d87882f79514a6083065b1e71b3407 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.306 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS13650 33d87882f79514a6083065b1e71b3407 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-15 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CKQ55_RS13650 33d87882f79514a6083065b1e71b3407 91 SUPERFAMILY SSF63562 1 79 5.23E-25 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CKQ55_RS13650 33d87882f79514a6083065b1e71b3407 91 SMART SM01409 8 61 1.3E-15 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CKQ55_RS13650 33d87882f79514a6083065b1e71b3407 91 Gene3D G3DSA:3.90.940.10 1 91 4.3E-28 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Gene3D G3DSA:3.40.50.920 259 414 5.5E-39 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Pfam PF12838 4Fe-4S dicluster domain 691 757 4.2E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Gene3D G3DSA:3.40.920.10 416 626 1.8E-61 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Gene3D G3DSA:3.40.50.970 2 258 8.0E-53 T 29-03-2018 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 SMART SM00890 622 681 1.9E-28 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 SUPERFAMILY SSF52518 786 1169 6.35E-128 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 SUPERFAMILY SSF53323 418 670 4.05E-85 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1168 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1067 5.2E-8 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 21 247 3.1E-81 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Gene3D G3DSA:3.30.70.20 671 784 3.6E-24 T 29-03-2018 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Gene3D G3DSA:4.10.780.10 634 670 2.1E-18 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 609 1.4E-31 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Gene3D G3DSA:3.40.50.970 785 1171 5.8E-115 T 29-03-2018 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 SUPERFAMILY SSF52518 3 258 1.91E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Pfam PF10371 Domain of unknown function 628 680 5.1E-24 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 374 5.9E-17 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 SUPERFAMILY SSF54862 667 830 1.78E-19 T 29-03-2018 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 SUPERFAMILY SSF52922 259 407 6.0E-44 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS22880 7a0ae72322b5ffdb59be8576b4bd3d69 1171 PIRSF PIRSF000159 1 1171 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 Pfam PF12431 Transcriptional regulator 135 162 4.7E-6 T 29-03-2018 IPR028141 Transcriptional regulator CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 Gene3D G3DSA:3.40.50.2300 5 142 3.4E-24 T 29-03-2018 CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 Pfam PF00072 Response regulator receiver domain 8 119 1.9E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 SUPERFAMILY SSF52172 7 146 2.99E-28 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 Gene3D G3DSA:1.10.10.10 143 230 0.0018 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 PIRSF PIRSF006171 4 231 8.1E-65 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CKQ55_RS08350 900ac167cc12eec835635e87d13eef00 232 SMART SM00448 6 119 1.5E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08910 f447b0778b46d52e363b83891a6c549e 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 41.397 T 29-03-2018 IPR020914 Uncharacterised protein family UPF0442 CKQ55_RS08910 f447b0778b46d52e363b83891a6c549e 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 2.3E-34 T 29-03-2018 IPR024528 Threonine/Serine exporter, ThrE CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 Pfam PF00005 ABC transporter 21 170 2.2E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 Pfam PF00005 ABC transporter 270 424 5.9E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 SUPERFAMILY SSF52540 245 477 6.01E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 SMART SM00382 30 218 9.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 SMART SM00382 278 473 3.3E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 Gene3D G3DSA:3.40.50.300 248 488 4.0E-40 T 29-03-2018 CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 Gene3D G3DSA:3.40.50.300 1 237 1.4E-53 T 29-03-2018 CKQ55_RS05105 da96403eecd0cfe1c663dcd6006fd2cb 494 SUPERFAMILY SSF52540 5 230 3.4E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 1.0E-6 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 SUPERFAMILY SSF46689 138 181 2.59E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 SMART SM00857 2 136 4.0E-62 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 Gene3D G3DSA:3.40.50.1390 1 106 1.6E-34 T 29-03-2018 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 Pfam PF00239 Resolvase, N terminal domain 3 135 2.3E-48 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 Gene3D G3DSA:1.10.10.60 138 181 2.6E-9 T 29-03-2018 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 SUPERFAMILY SSF53041 1 136 3.27E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS00170 7c4791df48c75138ff8642e3a3b36cc2 182 Gene3D G3DSA:1.20.5.40 107 134 4.6E-20 T 29-03-2018 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 1.0E-6 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 SUPERFAMILY SSF46689 138 181 2.59E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 SMART SM00857 2 136 4.0E-62 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 Gene3D G3DSA:3.40.50.1390 1 106 1.6E-34 T 29-03-2018 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 Pfam PF00239 Resolvase, N terminal domain 3 135 2.3E-48 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 Gene3D G3DSA:1.10.10.60 138 181 2.6E-9 T 29-03-2018 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 SUPERFAMILY SSF53041 1 136 3.27E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30110 7c4791df48c75138ff8642e3a3b36cc2 182 Gene3D G3DSA:1.20.5.40 107 134 4.6E-20 T 29-03-2018 CKQ55_RS09900 1bc63cdcb7d460196b4d9ba881722761 192 Pfam PF13649 Methyltransferase domain 39 127 3.1E-15 T 29-03-2018 CKQ55_RS09900 1bc63cdcb7d460196b4d9ba881722761 192 Gene3D G3DSA:3.40.50.150 2 190 9.5E-26 T 29-03-2018 CKQ55_RS09900 1bc63cdcb7d460196b4d9ba881722761 192 SUPERFAMILY SSF53335 4 161 3.1E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS25145 8f5e5264828534313aa1a7ce8b8eba98 240 SMART SM00382 26 213 8.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS25145 8f5e5264828534313aa1a7ce8b8eba98 240 Pfam PF00005 ABC transporter 17 165 2.9E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS25145 8f5e5264828534313aa1a7ce8b8eba98 240 SUPERFAMILY SSF52540 1 235 4.83E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25145 8f5e5264828534313aa1a7ce8b8eba98 240 Gene3D G3DSA:3.40.50.300 1 239 1.3E-75 T 29-03-2018 CKQ55_RS25145 8f5e5264828534313aa1a7ce8b8eba98 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS25145 8f5e5264828534313aa1a7ce8b8eba98 240 PIRSF PIRSF039085 1 240 5.1E-115 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 SUPERFAMILY SSF55129 3 59 5.1E-21 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.0E-28 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 29-03-2018 IPR018038 Ribosomal protein L30, conserved site CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.935 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 9.9E-19 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 PIRSF PIRSF002211 1 59 2.8E-29 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15405 4feffea74a7b86a96c498c445aa4994e 59 Gene3D G3DSA:3.30.1390.20 5 59 1.7E-23 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.8E-38 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 6.0E-61 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.5E-26 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 SUPERFAMILY SSF89360 1 96 2.88E-32 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 Gene3D G3DSA:2.60.300.12 2 107 7.1E-38 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS20130 e54759b2e1ff4ef798adf5bb9cd1ace8 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 44.543 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 SUPERFAMILY SSF55008 17 89 3.01E-21 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 Pfam PF00403 Heavy-metal-associated domain 25 85 1.9E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 6.4E-56 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 6.4E-56 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 6.4E-56 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 6.4E-56 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 6.4E-56 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 6.4E-56 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 2.8E-44 T 29-03-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 CKQ55_RS02565 35dc87887689d8e04ac39450f6d48dd7 91 Gene3D G3DSA:3.30.70.100 20 91 1.7E-22 T 29-03-2018 CKQ55_RS03510 32a2a466d6e220cedd78a47be6ce2afe 350 PIRSF PIRSF001361 1 350 1.3E-165 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CKQ55_RS03510 32a2a466d6e220cedd78a47be6ce2afe 350 Gene3D G3DSA:3.20.20.70 8 350 5.1E-135 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS03510 32a2a466d6e220cedd78a47be6ce2afe 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 9.0E-180 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CKQ55_RS03510 32a2a466d6e220cedd78a47be6ce2afe 350 Pfam PF00793 DAHP synthetase I family 38 338 3.7E-110 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS03510 32a2a466d6e220cedd78a47be6ce2afe 350 SUPERFAMILY SSF51569 7 348 2.83E-140 T 29-03-2018 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 Gene3D G3DSA:2.170.130.10 28 181 1.5E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 Gene3D G3DSA:2.40.170.20 184 727 3.0E-75 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 172 1.0E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 74 727 2.8E-157 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 Pfam PF00593 TonB dependent receptor 269 726 2.2E-48 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 SUPERFAMILY SSF56935 35 727 3.66E-115 T 29-03-2018 CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 710 727 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS00730 ceee36b3ca66951f798ec796cecc292f 727 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS12645 ec5f22c342df42422d8dd852c9b2c29e 503 SUPERFAMILY SSF49899 306 500 1.7E-22 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS12645 ec5f22c342df42422d8dd852c9b2c29e 503 Gene3D G3DSA:2.60.120.200 304 500 6.4E-33 T 29-03-2018 CKQ55_RS12645 ec5f22c342df42422d8dd852c9b2c29e 503 Pfam PF04616 Glycosyl hydrolases family 43 5 275 9.0E-62 T 29-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CKQ55_RS12645 ec5f22c342df42422d8dd852c9b2c29e 503 Gene3D G3DSA:2.115.10.20 4 291 5.6E-58 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS12645 ec5f22c342df42422d8dd852c9b2c29e 503 SUPERFAMILY SSF75005 5 280 6.67E-76 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS04590 be200daf0e9038b75cbf4874a9b232e5 522 Gene3D G3DSA:3.90.76.10 36 189 2.1E-23 T 29-03-2018 CKQ55_RS04590 be200daf0e9038b75cbf4874a9b232e5 522 SUPERFAMILY SSF53850 21 517 4.89E-98 T 29-03-2018 CKQ55_RS04590 be200daf0e9038b75cbf4874a9b232e5 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 2.5E-66 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS04590 be200daf0e9038b75cbf4874a9b232e5 522 PIRSF PIRSF002741 8 519 9.7E-62 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS04590 be200daf0e9038b75cbf4874a9b232e5 522 Gene3D G3DSA:3.40.190.10 194 290 4.9E-17 T 29-03-2018 CKQ55_RS04590 be200daf0e9038b75cbf4874a9b232e5 522 Gene3D G3DSA:3.10.105.10 291 496 6.8E-34 T 29-03-2018 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 393 3.6E-83 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 Gene3D G3DSA:3.20.140.10 1 400 9.9E-107 T 29-03-2018 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 SUPERFAMILY SSF51690 120 392 1.9E-88 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 SUPERFAMILY SSF54675 2 138 2.41E-42 T 29-03-2018 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 50.114 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 PIRSF PIRSF000484 1 396 2.3E-63 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CKQ55_RS01995 e5f31aa6a9ad8bcf00f3f8d002136255 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 2.3E-173 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 Gene3D G3DSA:3.40.50.1360 71 243 2.1E-35 T 29-03-2018 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.0E-47 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 Gene3D G3DSA:1.10.10.10 4 70 6.2E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 SUPERFAMILY SSF100950 76 233 1.88E-26 T 29-03-2018 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 SUPERFAMILY SSF46785 5 67 1.21E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 SMART SM00420 6 58 2.4E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 SMART SM01134 73 233 9.0E-65 T 29-03-2018 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.9E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.9E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS26505 692faece25e995ebd0c1a1f3f2326a1f 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.4E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 SUPERFAMILY SSF56784 1 264 1.11E-69 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 Gene3D G3DSA:3.40.50.1000 1 95 1.0E-17 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 2.5E-28 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.7E-64 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 Gene3D G3DSA:3.30.1240.10 96 187 1.9E-23 T 29-03-2018 CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 9.7E-68 T 29-03-2018 IPR000150 Cof family GO:0016787 CKQ55_RS11790 febe9557ae0b2af931a22a1c8a6c9f4b 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 29-03-2018 CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 Pfam PF00106 short chain dehydrogenase 3 196 1.8E-62 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 255 1.5E-124 T 29-03-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 Gene3D G3DSA:3.40.50.720 1 39 1.3E-8 T 29-03-2018 CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 Gene3D G3DSA:3.40.50.720 40 256 1.7E-60 T 29-03-2018 CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 SUPERFAMILY SSF51735 2 254 2.8E-79 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.2E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.2E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.2E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.2E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.2E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25330 ac65b889d3cdf4222bc9ecf62bd898e6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS08575 9af7adcfe27e47da0ed56be9fc76f916 219 Pfam PF15977 Winged helix-turn-helix DNA binding 150 216 4.5E-26 T 29-03-2018 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 514 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 SUPERFAMILY SSF48179 492 602 1.02E-27 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 SUPERFAMILY SSF51735 309 489 1.09E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 707 0.0 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Gene3D G3DSA:3.90.226.10 1 205 3.7E-57 T 29-03-2018 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Gene3D G3DSA:3.40.50.720 252 490 1.7E-57 T 29-03-2018 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Gene3D G3DSA:1.10.1040.10 491 591 1.5E-23 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Gene3D G3DSA:1.10.1040.10 614 707 5.7E-20 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 204 4.7E-42 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 707 52.212 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 SUPERFAMILY SSF52096 3 299 5.42E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 SUPERFAMILY SSF48179 615 707 2.04E-25 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 4.3E-57 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 5.5E-26 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS20850 97688aad11bcd99a2020461f957d3b97 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 703 3.3E-5 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS23045 2d70501e8757e2a38185b3a3e26b118a 176 Pfam PF00419 Fimbrial protein 28 176 1.5E-21 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23045 2d70501e8757e2a38185b3a3e26b118a 176 SUPERFAMILY SSF49401 33 176 8.45E-34 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS23045 2d70501e8757e2a38185b3a3e26b118a 176 Gene3D G3DSA:2.60.40.1090 25 176 9.7E-36 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 109 529 9.0E-114 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 Pfam PF02264 LamB porin 105 534 1.5E-103 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 1.9E-17 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 Gene3D G3DSA:2.40.170.10 110 534 3.6E-105 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 SUPERFAMILY SSF56935 102 534 1.04E-102 T 29-03-2018 CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 SUPERFAMILY SSF57997 27 97 1.83E-6 T 29-03-2018 CKQ55_RS27810 18ea8095ee64fde37d1afa26ef584643 534 Gene3D G3DSA:1.20.120.330 20 109 9.6E-4 T 29-03-2018 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 Gene3D G3DSA:3.30.300.30 431 535 3.1E-23 T 29-03-2018 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 SUPERFAMILY SSF56801 6 531 1.44E-124 T 29-03-2018 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 Pfam PF00501 AMP-binding enzyme 35 436 5.8E-75 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 Gene3D G3DSA:3.40.50.980 192 353 8.8E-28 T 29-03-2018 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 519 2.4E-11 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 Gene3D G3DSA:3.40.50.980 22 191 5.5E-26 T 29-03-2018 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 Gene3D G3DSA:2.30.38.10 355 430 8.8E-22 T 29-03-2018 CKQ55_RS04430 2c1ae604b2ca85e46a3713aae9d83405 535 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 2 526 7.5E-263 T 29-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 CKQ55_RS04415 436d119dbaf7eb2e9b0a470a0e8b04ca 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 49.62 T 29-03-2018 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 CKQ55_RS04415 436d119dbaf7eb2e9b0a470a0e8b04ca 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 3.3E-44 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CKQ55_RS04415 436d119dbaf7eb2e9b0a470a0e8b04ca 137 Gene3D G3DSA:3.10.129.10 1 136 1.3E-26 T 29-03-2018 CKQ55_RS04415 436d119dbaf7eb2e9b0a470a0e8b04ca 137 Pfam PF03061 Thioesterase superfamily 50 127 3.0E-16 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CKQ55_RS04415 436d119dbaf7eb2e9b0a470a0e8b04ca 137 SUPERFAMILY SSF54637 2 136 3.47E-30 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS07325 03bbbe5ca31b6f46eab1056c47dac750 246 Gene3D G3DSA:2.40.440.10 39 174 1.4E-7 T 29-03-2018 CKQ55_RS07325 03bbbe5ca31b6f46eab1056c47dac750 246 SUPERFAMILY SSF141523 42 159 1.96E-9 T 29-03-2018 CKQ55_RS07325 03bbbe5ca31b6f46eab1056c47dac750 246 Pfam PF03734 L,D-transpeptidase catalytic domain 44 159 3.9E-6 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 Gene3D G3DSA:1.10.150.240 29 74 8.3E-13 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 186 3.5E-15 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 Gene3D G3DSA:3.40.50.1000 75 220 4.0E-31 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.5E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.5E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.5E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 1.5E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 SUPERFAMILY SSF56784 1 210 3.45E-50 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 180 5.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 8.9E-33 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS22160 2df7a30c0ca7583883f8207a7ab5c109 220 Gene3D G3DSA:3.40.50.1000 1 28 0.19 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS07920 ef5657d4a2d8d8588093835d5c5bc89a 178 SUPERFAMILY SSF53271 3 173 3.93E-54 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS07920 ef5657d4a2d8d8588093835d5c5bc89a 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 4.8E-74 T 29-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CKQ55_RS07920 ef5657d4a2d8d8588093835d5c5bc89a 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 5.1E-25 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CKQ55_RS07920 ef5657d4a2d8d8588093835d5c5bc89a 178 Gene3D G3DSA:3.40.50.2020 1 175 3.2E-42 T 29-03-2018 CKQ55_RS28845 943b3f5c5b1e65130d86ade3f46c85ad 319 Pfam PF04463 Protein of unknown function (DUF523) 7 149 8.2E-38 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CKQ55_RS28845 943b3f5c5b1e65130d86ade3f46c85ad 319 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 3.8E-40 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 CKQ55_RS28845 943b3f5c5b1e65130d86ade3f46c85ad 319 PIRSF PIRSF037004 1 318 1.7E-134 T 29-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 8.9E-218 T 29-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.0E-29 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.0E-29 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-29 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.0E-29 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.0E-29 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 Gene3D G3DSA:3.40.50.720 163 331 6.2E-36 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 SUPERFAMILY SSF51905 1 365 9.72E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 Gene3D G3DSA:3.50.50.60 1 162 3.0E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 5.2E-69 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.4E-67 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 SUPERFAMILY SSF55424 336 450 1.49E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 PIRSF PIRSF000350 1 447 4.8E-86 T 29-03-2018 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.1E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CKQ55_RS14375 e33ce609119a49a20ed11ca9666bfaa2 450 Gene3D G3DSA:3.30.390.30 332 450 2.8E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS27765 9643d488906391fb68b567f2d447b897 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 226 2.3E-126 T 29-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 CKQ55_RS27765 9643d488906391fb68b567f2d447b897 226 Gene3D G3DSA:1.20.950.20 2 217 5.5E-42 T 29-03-2018 CKQ55_RS27765 9643d488906391fb68b567f2d447b897 226 SUPERFAMILY SSF103501 3 225 3.53E-69 T 29-03-2018 IPR023234 NarG-like domain CKQ55_RS27765 9643d488906391fb68b567f2d447b897 226 Pfam PF02665 Nitrate reductase gamma subunit 6 225 5.5E-77 T 29-03-2018 IPR023234 NarG-like domain CKQ55_RS13550 c3fa2fb73c09a21aa908e717c358de23 243 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 65 2.4E-10 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS13550 c3fa2fb73c09a21aa908e717c358de23 243 SUPERFAMILY SSF46689 11 71 1.79E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13550 c3fa2fb73c09a21aa908e717c358de23 243 Pfam PF01380 SIS domain 103 205 1.2E-8 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS13550 c3fa2fb73c09a21aa908e717c358de23 243 SUPERFAMILY SSF53697 84 208 3.78E-16 T 29-03-2018 CKQ55_RS13550 c3fa2fb73c09a21aa908e717c358de23 243 Gene3D G3DSA:1.10.10.10 4 93 1.7E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13550 c3fa2fb73c09a21aa908e717c358de23 243 Gene3D G3DSA:3.40.50.10490 94 235 4.0E-12 T 29-03-2018 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 622 2.6E-204 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 Gene3D G3DSA:2.40.170.20 152 622 7.5E-76 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 622 34.696 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 Gene3D G3DSA:2.170.130.10 19 151 2.1E-35 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 605 622 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 SUPERFAMILY SSF56935 26 622 2.69E-121 T 29-03-2018 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 1.0E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS12160 8727ab185a5a50e0f10cc62d6279cbb3 622 Pfam PF00593 TonB dependent receptor 199 621 1.7E-45 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 4.6E-84 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 SMART SM00493 81 166 9.4E-20 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 Pfam PF13662 Toprim domain 82 172 4.0E-24 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.608 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 Gene3D G3DSA:3.40.1360.10 78 171 1.4E-35 T 29-03-2018 CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 SUPERFAMILY SSF111304 2 199 1.15E-72 T 29-03-2018 IPR023627 Recombination protein RecR CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 Gene3D G3DSA:1.10.150.20 6 41 0.38 T 29-03-2018 CKQ55_RS05905 86ede88f199285e0eb5e843fdf2b05dd 201 Pfam PF02132 RecR protein 41 77 3.5E-15 T 29-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CKQ55_RS21645 f8479b58669c2edb8ff80a815436712f 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 1.6E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21645 f8479b58669c2edb8ff80a815436712f 364 Gene3D G3DSA:1.10.3720.10 2 349 1.2E-35 T 29-03-2018 CKQ55_RS21645 f8479b58669c2edb8ff80a815436712f 364 SUPERFAMILY SSF161098 131 346 1.7E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 Gene3D G3DSA:1.10.287.680 1 47 1.3E-26 T 29-03-2018 IPR023145 YfbU, helix-hairpin domain CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 6.0E-90 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 SUPERFAMILY SSF116960 1 164 3.66E-71 T 29-03-2018 CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 PIRSF PIRSF006272 1 164 6.1E-80 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 Pfam PF03887 YfbU domain 1 164 8.9E-70 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 Gene3D G3DSA:1.10.3190.10 54 164 1.9E-43 T 29-03-2018 IPR023146 YfbU, alpha-helical bundle domain CKQ55_RS21080 bdbbfb0d2ba1fe6ce03e38c76a4ee8fe 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 39.832 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CKQ55_RS00155 27d6b40ea8732b900a2154c01888d73d 139 Gene3D G3DSA:2.10.109.10 20 138 5.3E-25 T 29-03-2018 CKQ55_RS00155 27d6b40ea8732b900a2154c01888d73d 139 Pfam PF00717 Peptidase S24-like 57 119 3.2E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS00155 27d6b40ea8732b900a2154c01888d73d 139 SUPERFAMILY SSF51306 13 136 1.48E-33 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS00155 27d6b40ea8732b900a2154c01888d73d 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 6.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS00155 27d6b40ea8732b900a2154c01888d73d 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 6.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS00155 27d6b40ea8732b900a2154c01888d73d 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 6.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30095 27d6b40ea8732b900a2154c01888d73d 139 Gene3D G3DSA:2.10.109.10 20 138 5.3E-25 T 29-03-2018 CKQ55_RS30095 27d6b40ea8732b900a2154c01888d73d 139 Pfam PF00717 Peptidase S24-like 57 119 3.2E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS30095 27d6b40ea8732b900a2154c01888d73d 139 SUPERFAMILY SSF51306 13 136 1.48E-33 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS30095 27d6b40ea8732b900a2154c01888d73d 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 6.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30095 27d6b40ea8732b900a2154c01888d73d 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 6.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30095 27d6b40ea8732b900a2154c01888d73d 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 6.0E-11 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 SUPERFAMILY SSF47005 210 253 3.53E-8 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 SUPERFAMILY SSF52777 265 499 5.78E-79 T 29-03-2018 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 SUPERFAMILY SSF51230 4 93 1.31E-21 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Pfam PF00364 Biotin-requiring enzyme 6 76 3.8E-16 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Gene3D G3DSA:2.40.50.100 64 119 0.012 T 29-03-2018 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 274 499 3.1E-81 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Gene3D G3DSA:4.10.320.10 143 205 6.6E-8 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Gene3D G3DSA:4.10.320.10 207 267 3.2E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Gene3D G3DSA:2.40.50.100 3 63 1.2E-11 T 29-03-2018 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Pfam PF02817 e3 binding domain 217 251 2.1E-7 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Pfam PF02817 e3 binding domain 150 184 1.4E-5 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 SUPERFAMILY SSF47005 145 186 8.37E-6 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CKQ55_RS27295 07acff8a3d6c2fc759c934361e0d37a9 509 Gene3D G3DSA:3.30.559.10 268 508 7.1E-90 T 29-03-2018 CKQ55_RS20775 3b2761fbf82e37f079b39b312a6dc8b4 321 Gene3D G3DSA:3.40.367.20 110 299 1.1E-29 T 29-03-2018 CKQ55_RS20775 3b2761fbf82e37f079b39b312a6dc8b4 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 1.5E-149 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CKQ55_RS20775 3b2761fbf82e37f079b39b312a6dc8b4 321 SUPERFAMILY SSF53067 4 318 4.75E-62 T 29-03-2018 CKQ55_RS20775 3b2761fbf82e37f079b39b312a6dc8b4 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.5 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CKQ55_RS20775 3b2761fbf82e37f079b39b312a6dc8b4 321 Pfam PF02685 Glucokinase 6 315 9.5E-122 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CKQ55_RS20775 3b2761fbf82e37f079b39b312a6dc8b4 321 Gene3D G3DSA:3.30.420.40 1 109 5.9E-15 T 29-03-2018 CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 TIGRFAM TIGR02938 nifL_nitrog: nitrogen fixation negative regulator NifL 25 343 2.4E-75 T 29-03-2018 IPR014285 Nitrogen fixation negative regulator NifL GO:0004871|GO:0007165|GO:0009399|GO:0050660 CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 Pfam PF00989 PAS fold 27 136 9.6E-20 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 SUPERFAMILY SSF55785 33 136 6.81E-27 T 29-03-2018 IPR000014 PAS domain CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 Gene3D G3DSA:3.30.450.20 143 192 6.5E-6 T 29-03-2018 CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 SUPERFAMILY SSF55874 347 486 5.47E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 Gene3D G3DSA:3.30.450.20 20 142 7.1E-26 T 29-03-2018 CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 SMART SM00091 25 92 2.9E-5 T 29-03-2018 IPR000014 PAS domain CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 SMART SM00086 97 139 8.2E-8 T 29-03-2018 IPR001610 PAC motif CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 Gene3D G3DSA:3.30.565.10 255 487 5.3E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22800 d1f63a6cb4d10d26e2acc68e109b35ca 495 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 146 9.6E-19 T 29-03-2018 IPR000014 PAS domain CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Gene3D G3DSA:3.20.20.80 403 993 7.1E-85 T 29-03-2018 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 SMART SM00642 533 927 0.0049 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Gene3D G3DSA:2.60.40.1130 181 293 1.5E-27 T 29-03-2018 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 SUPERFAMILY SSF49452 40 168 1.9E-31 T 29-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Gene3D G3DSA:2.60.40.1180 994 1087 2.5E-30 T 29-03-2018 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 SUPERFAMILY SSF51445 400 972 2.29E-143 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Pfam PF11852 Domain of unknown function (DUF3372) 913 1074 1.1E-45 T 29-03-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 304 388 2.5E-17 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 SUPERFAMILY SSF81296 173 293 1.18E-31 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 181 1077 0.0 T 29-03-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 SUPERFAMILY SSF51011 974 1089 4.96E-30 T 29-03-2018 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 SUPERFAMILY SSF81296 304 406 1.3E-23 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Gene3D G3DSA:2.60.40.10 295 402 2.0E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Gene3D G3DSA:2.60.40.1110 39 168 3.3E-28 T 29-03-2018 CKQ55_RS07740 92dd3e99adca14e0f4d11030a4182d28 1090 Pfam PF03714 Bacterial pullanase-associated domain 77 168 2.8E-9 T 29-03-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 PIRSF PIRSF017107 1 413 3.2E-244 T 29-03-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 2.4E-71 T 29-03-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 SUPERFAMILY SSF54826 1 160 2.83E-63 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 Gene3D G3DSA:3.20.20.120 165 413 1.0E-32 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 Gene3D G3DSA:3.30.390.10 2 162 1.4E-61 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 SUPERFAMILY SSF51604 163 411 1.7E-79 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 410 1.3E-118 T 29-03-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CKQ55_RS03640 1665c295efbabc70beb2841d9e8b1dba 413 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 410 3.0E-165 T 29-03-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CKQ55_RS23980 361cc2babe053c5fc85f94822ae6133d 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 29-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 CKQ55_RS23980 361cc2babe053c5fc85f94822ae6133d 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 51.218 T 29-03-2018 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 CKQ55_RS23980 361cc2babe053c5fc85f94822ae6133d 192 Pfam PF00293 NUDIX domain 30 143 9.3E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS23980 361cc2babe053c5fc85f94822ae6133d 192 Gene3D G3DSA:3.90.79.10 7 189 3.3E-41 T 29-03-2018 CKQ55_RS23980 361cc2babe053c5fc85f94822ae6133d 192 SUPERFAMILY SSF55811 10 181 1.3E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS01725 ca20cd7c3e927fab8d1c52b4f6149c9d 365 Pfam PF00117 Glutamine amidotransferase class-I 167 358 1.5E-21 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS01725 ca20cd7c3e927fab8d1c52b4f6149c9d 365 Gene3D G3DSA:3.40.50.880 139 364 8.7E-33 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS01725 ca20cd7c3e927fab8d1c52b4f6149c9d 365 SUPERFAMILY SSF52317 142 362 9.02E-35 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 Gene3D G3DSA:1.10.8.60 310 382 1.1E-21 T 29-03-2018 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 SUPERFAMILY SSF46689 388 438 3.17E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 Pfam PF00158 Sigma-54 interaction domain 137 303 2.5E-72 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 Pfam PF00072 Response regulator receiver domain 10 118 3.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 SMART SM00382 157 300 3.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 Gene3D G3DSA:3.40.50.300 138 309 5.5E-26 T 29-03-2018 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 SUPERFAMILY SSF52172 5 181 4.7E-42 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 Gene3D G3DSA:3.40.50.2300 1 137 8.1E-34 T 29-03-2018 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 SUPERFAMILY SSF52540 137 381 1.63E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 Gene3D G3DSA:1.10.10.60 383 440 1.0E-8 T 29-03-2018 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 SMART SM00448 7 118 3.6E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS20030 ec97aef9992f9b5727246f8ea8897963 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS14125 0364aed217bd0e19fd8e56f9c703fd08 148 SUPERFAMILY SSF55729 1 136 9.24E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS14125 0364aed217bd0e19fd8e56f9c703fd08 148 Gene3D G3DSA:3.40.630.30 1 145 5.4E-18 T 29-03-2018 CKQ55_RS14125 0364aed217bd0e19fd8e56f9c703fd08 148 Pfam PF13673 Acetyltransferase (GNAT) domain 46 122 1.0E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS08680 7a7ddab2eabef567b5b03a193aa72e4b 228 SUPERFAMILY SSF75217 2 157 3.66E-30 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS08680 7a7ddab2eabef567b5b03a193aa72e4b 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 224 1.0E-69 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS08680 7a7ddab2eabef567b5b03a193aa72e4b 228 Gene3D G3DSA:3.40.1280.10 2 162 4.2E-33 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS08680 7a7ddab2eabef567b5b03a193aa72e4b 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 5.9E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CKQ55_RS08680 7a7ddab2eabef567b5b03a193aa72e4b 228 PIRSF PIRSF004808 1 228 1.3E-60 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 Pfam PF12833 Helix-turn-helix domain 207 285 2.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 SMART SM00342 201 284 2.0E-32 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 Gene3D G3DSA:1.10.10.60 240 288 3.1E-15 T 29-03-2018 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 SUPERFAMILY SSF46689 237 285 4.03E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 2.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 2.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 Gene3D G3DSA:1.10.10.60 143 239 2.0E-15 T 29-03-2018 CKQ55_RS28085 be20b5bda2d017a5bee6e07d5af3efc2 288 SUPERFAMILY SSF46689 185 235 1.66E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS31300 16a0f8c8b2999f3be9b13a236b51cc33 129 SUPERFAMILY SSF52980 14 96 4.93E-8 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS31300 16a0f8c8b2999f3be9b13a236b51cc33 129 Pfam PF04471 Restriction endonuclease 16 92 1.7E-7 T 29-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 CKQ55_RS31300 16a0f8c8b2999f3be9b13a236b51cc33 129 Gene3D G3DSA:3.40.1350.10 6 102 9.8E-11 T 29-03-2018 CKQ55_RS16275 5752f968525ab111a124e20fb808d037 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 1.4E-145 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CKQ55_RS16275 5752f968525ab111a124e20fb808d037 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 79.16 T 29-03-2018 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CKQ55_RS16275 5752f968525ab111a124e20fb808d037 523 Pfam PF08666 SAF domain 22 91 7.0E-14 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CKQ55_RS16275 5752f968525ab111a124e20fb808d037 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 1.5E-281 T 29-03-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CKQ55_RS16275 5752f968525ab111a124e20fb808d037 523 SMART SM00858 22 92 7.8E-13 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CKQ55_RS16285 cd8f3ced43f72aeb2091a58762b63893 444 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 434 3.7E-137 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS16285 cd8f3ced43f72aeb2091a58762b63893 444 PIRSF PIRSF002808 2 444 1.5E-35 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS16285 cd8f3ced43f72aeb2091a58762b63893 444 Gene3D G3DSA:1.20.1250.20 239 444 2.8E-25 T 29-03-2018 CKQ55_RS16285 cd8f3ced43f72aeb2091a58762b63893 444 Gene3D G3DSA:1.20.1250.20 4 230 1.7E-35 T 29-03-2018 CKQ55_RS16285 cd8f3ced43f72aeb2091a58762b63893 444 SUPERFAMILY SSF103473 5 443 3.79E-78 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS16285 cd8f3ced43f72aeb2091a58762b63893 444 Pfam PF07690 Major Facilitator Superfamily 23 366 5.5E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS12400 a4d598d36605de4d648777937d13b2c0 334 Gene3D G3DSA:1.10.3470.10 15 333 2.2E-28 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS12400 a4d598d36605de4d648777937d13b2c0 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 318 4.9E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS03800 79e8970210a0b3b343d0d4db7e73f813 247 Gene3D G3DSA:3.40.1390.30 1 109 7.1E-29 T 29-03-2018 CKQ55_RS03800 79e8970210a0b3b343d0d4db7e73f813 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 4.3E-82 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CKQ55_RS03800 79e8970210a0b3b343d0d4db7e73f813 247 SUPERFAMILY SSF102705 1 246 1.02E-83 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CKQ55_RS03800 79e8970210a0b3b343d0d4db7e73f813 247 Gene3D G3DSA:3.40.1390.30 110 218 1.2E-30 T 29-03-2018 CKQ55_RS03800 79e8970210a0b3b343d0d4db7e73f813 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 2.7E-56 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Pfam PF00122 E1-E2 ATPase 124 317 1.0E-53 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 339 345 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SMART SM00831 16 89 9.9E-32 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF81653 128 236 7.32E-31 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Gene3D G3DSA:3.40.50.1000 537 659 4.2E-21 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF81660 344 542 1.18E-42 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 18 83 1.9E-19 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF56784 335 355 5.82E-59 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF56784 493 742 5.82E-59 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Pfam PF00689 Cation transporting ATPase, C-terminus 724 895 2.5E-39 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 549 2.0E-40 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 570 2.0E-40 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 2.0E-40 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 174 188 2.0E-40 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 675 2.0E-40 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 2.0E-40 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 496 514 7.1E-21 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 611 627 7.1E-21 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 808 829 7.1E-21 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 639 655 7.1E-21 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 671 696 7.1E-21 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 189 357 2.2E-22 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 95 194 3.2E-18 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 607 732 1.5E-35 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Gene3D G3DSA:2.70.150.10 25 237 1.5E-50 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 333 653 2.4E-20 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Gene3D G3DSA:1.20.1110.10 660 902 1.2E-59 T 29-03-2018 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF81665 689 901 7.85E-117 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF81665 17 127 7.85E-117 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 SUPERFAMILY SSF81665 237 331 7.85E-117 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS04725 07a41f77645bdac03862fc573c87f721 903 Gene3D G3DSA:3.40.1110.10 301 536 5.9E-36 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS09735 33fdfd3e74803a52ad29a2970fb21e8a 272 Pfam PF00005 ABC transporter 21 180 1.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS09735 33fdfd3e74803a52ad29a2970fb21e8a 272 Gene3D G3DSA:3.40.50.300 2 271 4.5E-74 T 29-03-2018 CKQ55_RS09735 33fdfd3e74803a52ad29a2970fb21e8a 272 PIRSF PIRSF039085 2 256 3.9E-110 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS09735 33fdfd3e74803a52ad29a2970fb21e8a 272 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS09735 33fdfd3e74803a52ad29a2970fb21e8a 272 SMART SM00382 30 228 4.6E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS09735 33fdfd3e74803a52ad29a2970fb21e8a 272 SUPERFAMILY SSF52540 6 250 8.52E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12895 88dc18b4cf486ac2800e0a1de2ca617e 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 8.1E-59 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CKQ55_RS12895 88dc18b4cf486ac2800e0a1de2ca617e 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.848 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CKQ55_RS12895 88dc18b4cf486ac2800e0a1de2ca617e 207 Gene3D G3DSA:3.40.50.150 1 207 5.4E-38 T 29-03-2018 CKQ55_RS12895 88dc18b4cf486ac2800e0a1de2ca617e 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 2.1E-65 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CKQ55_RS12895 88dc18b4cf486ac2800e0a1de2ca617e 207 PIRSF PIRSF003078 1 206 9.8E-67 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CKQ55_RS12895 88dc18b4cf486ac2800e0a1de2ca617e 207 SUPERFAMILY SSF53335 4 204 5.32E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 Pfam PF07690 Major Facilitator Superfamily 283 434 2.9E-13 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 SUPERFAMILY SSF103473 19 439 2.75E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 Gene3D G3DSA:1.20.1250.20 19 234 6.0E-25 T 29-03-2018 CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 6.7E-151 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 Pfam PF00083 Sugar (and other) transporter 24 226 2.7E-23 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS14325 0e71ef401b9003b434622cd4ed135d96 440 Gene3D G3DSA:1.20.1250.20 235 438 1.6E-20 T 29-03-2018 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 SUPERFAMILY SSF53613 6 307 1.01E-84 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS12835 71f67087c5135132808a323b91460822 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 1.9E-76 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS12835 71f67087c5135132808a323b91460822 309 Gene3D G3DSA:3.40.1190.20 1 309 1.5E-86 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS12835 71f67087c5135132808a323b91460822 309 PRINTS PR00990 Ribokinase signature 36 55 9.7E-39 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 PRINTS PR00990 Ribokinase signature 9 30 9.7E-39 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 PRINTS PR00990 Ribokinase signature 108 121 9.7E-39 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 PRINTS PR00990 Ribokinase signature 220 231 9.7E-39 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 PRINTS PR00990 Ribokinase signature 176 191 9.7E-39 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 26.211 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CKQ55_RS12835 71f67087c5135132808a323b91460822 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 1.5E-110 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 Pfam PF07731 Multicopper oxidase 411 533 7.1E-25 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 SUPERFAMILY SSF49503 172 306 1.06E-30 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 Gene3D G3DSA:2.60.40.420 29 169 1.1E-25 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 SUPERFAMILY SSF49503 34 167 2.06E-28 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 Gene3D G3DSA:2.60.40.420 412 533 3.3E-28 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 Pfam PF00394 Multicopper oxidase 226 289 6.6E-6 T 29-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 Pfam PF07732 Multicopper oxidase 59 166 4.1E-29 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 Gene3D G3DSA:2.60.40.420 170 411 7.4E-30 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 ProSitePatterns PS00080 Multicopper oxidases signature 2. 516 527 - T 29-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CKQ55_RS07930 4f502b5353fa7fd1818e4daf936d51cb 533 SUPERFAMILY SSF49503 353 533 1.63E-29 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS22075 5601bfba781b2811f21ffba5673dc32b 428 SUPERFAMILY SSF56672 214 309 3.41E-15 T 29-03-2018 CKQ55_RS22075 5601bfba781b2811f21ffba5673dc32b 428 SUPERFAMILY SSF56672 49 168 3.41E-15 T 29-03-2018 CKQ55_RS22075 5601bfba781b2811f21ffba5673dc32b 428 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 211 331 5.1E-11 T 29-03-2018 IPR000477 Reverse transcriptase domain CKQ55_RS22075 5601bfba781b2811f21ffba5673dc32b 428 Gene3D G3DSA:3.30.70.270 49 331 8.8E-23 T 29-03-2018 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 6.4E-46 T 29-03-2018 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 6.4E-46 T 29-03-2018 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 6.4E-46 T 29-03-2018 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 6.4E-46 T 29-03-2018 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00473 Galactokinase signature 92 103 5.9E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00473 Galactokinase signature 27 45 5.9E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00473 Galactokinase signature 112 130 5.9E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PRINTS PR00473 Galactokinase signature 263 277 5.9E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 Gene3D G3DSA:3.30.70.890 207 381 5.1E-59 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 Pfam PF10509 Galactokinase galactose-binding signature 10 58 2.6E-23 T 29-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 2.7E-171 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 PIRSF PIRSF000530 1 382 3.5E-126 T 29-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.6E-14 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 Pfam PF08544 GHMP kinases C terminal 279 361 1.5E-12 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 SUPERFAMILY SSF55060 205 380 2.4E-52 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.718 T 29-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 SUPERFAMILY SSF54211 3 202 1.37E-64 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 Gene3D G3DSA:3.30.230.10 2 206 8.7E-61 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS03495 f93305bcf1997af067ccfd01196f9913 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 29-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CKQ55_RS01225 a05b6c4431623e51a322a2b99f33f992 113 Gene3D G3DSA:3.40.50.2300 4 101 1.4E-35 T 29-03-2018 CKQ55_RS01225 a05b6c4431623e51a322a2b99f33f992 113 SUPERFAMILY SSF52794 5 99 2.27E-30 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS01225 a05b6c4431623e51a322a2b99f33f992 113 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 87 1.2E-29 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CKQ55_RS01225 a05b6c4431623e51a322a2b99f33f992 113 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 96 2.4E-15 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 Gene3D G3DSA:2.40.50.230 389 473 6.9E-21 T 29-03-2018 IPR006531 Gp5 N-terminal CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 759 9.2E-47 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 516 6.4E-74 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 Gene3D G3DSA:3.55.50.10 107 203 8.8E-27 T 29-03-2018 CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 Pfam PF05954 Phage late control gene D protein (GPD) 35 356 2.0E-58 T 29-03-2018 CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 SUPERFAMILY SSF69255 383 473 1.52E-25 T 29-03-2018 CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 27 516 3.2E-95 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 491 594 2.2E-31 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 SUPERFAMILY SSF69279 200 384 9.01E-39 T 29-03-2018 CKQ55_RS21510 1032781d808bbb52be6f3fea9539ef2d 871 SUPERFAMILY SSF69279 15 198 4.48E-48 T 29-03-2018 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PIRSF PIRSF000106 2 563 4.5E-226 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 SMART SM01274 81 261 4.1E-103 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 Gene3D G3DSA:3.40.50.720 269 565 8.9E-109 T 29-03-2018 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.1E-77 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 Gene3D G3DSA:3.40.50.10380 15 268 3.2E-109 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 267 283 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 183 205 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 408 424 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 147 176 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 298 314 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 87 111 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 PRINTS PR00072 Malic enzyme signature 242 260 1.6E-73 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 SUPERFAMILY SSF53223 5 270 2.3E-106 T 29-03-2018 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 3.4E-105 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 SUPERFAMILY SSF51735 271 562 1.65E-97 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 SMART SM00919 271 531 4.8E-134 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CKQ55_RS27615 f00f8777885c88b269f89dcfc6b6974e 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.739 T 29-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 SUPERFAMILY SSF55729 45 154 2.7E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 PRINTS PR01754 Streptothricin acetyltransferase signature 161 174 7.1E-13 T 29-03-2018 IPR008125 Streptothricin acetyltransferase CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 PRINTS PR01754 Streptothricin acetyltransferase signature 94 109 7.1E-13 T 29-03-2018 IPR008125 Streptothricin acetyltransferase CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 PRINTS PR01754 Streptothricin acetyltransferase signature 139 155 7.1E-13 T 29-03-2018 IPR008125 Streptothricin acetyltransferase CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 PRINTS PR01754 Streptothricin acetyltransferase signature 118 133 7.1E-13 T 29-03-2018 IPR008125 Streptothricin acetyltransferase CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 Gene3D G3DSA:3.40.630.30 4 167 3.4E-19 T 29-03-2018 CKQ55_RS27320 deb77758629d02777a4a69ef7db2fafc 175 Pfam PF00583 Acetyltransferase (GNAT) family 46 147 1.0E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 1.9E-20 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 215 226 1.9E-20 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 114 132 1.9E-20 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 331 345 1.9E-20 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 179 196 1.9E-20 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 240 249 1.9E-20 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 Gene3D G3DSA:1.50.10.10 22 360 2.5E-96 T 29-03-2018 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 SUPERFAMILY SSF48208 9 351 1.91E-99 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS14285 9e37ccd42373ea6340d6cf59219abec3 368 Pfam PF01270 Glycosyl hydrolases family 8 1 346 4.7E-112 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SUPERFAMILY SSF56091 3 316 2.56E-124 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 1.8E-142 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 7.7E-36 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.585 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:2.40.50.140 322 390 1.2E-34 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:1.10.150.20 506 571 9.0E-28 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SMART SM00292 595 672 1.2E-16 T 29-03-2018 IPR001357 BRCT domain CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Pfam PF14520 Helix-hairpin-helix domain 446 502 2.9E-6 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SMART SM00278 480 499 1.9 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SMART SM00278 446 465 67.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SMART SM00278 512 531 550.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SMART SM00278 544 563 87.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SUPERFAMILY SSF50249 318 400 1.06E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:1.10.287.610 1 67 6.2E-26 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SUPERFAMILY SSF52113 596 670 3.55E-19 T 29-03-2018 IPR001357 BRCT domain CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 PIRSF PIRSF001604 1 673 3.4E-259 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:1.10.150.20 432 505 2.2E-25 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SMART SM00532 3 448 9.4E-294 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:3.40.50.10190 572 673 4.3E-27 T 29-03-2018 IPR001357 BRCT domain CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Pfam PF12826 Helix-hairpin-helix motif 510 573 2.4E-23 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:3.30.470.30 119 240 1.1E-54 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.4E-10 T 29-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Gene3D G3DSA:3.30.1490.70 241 321 7.5E-25 T 29-03-2018 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 2.3E-278 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 SUPERFAMILY SSF47781 403 583 1.26E-61 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS20660 7efeee7ea5bed8cf78693af1902f7e09 674 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 4.9E-13 T 29-03-2018 IPR001357 BRCT domain CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 7.5E-21 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 Gene3D G3DSA:1.10.1140.10 348 458 6.8E-46 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 SMART SM00382 142 327 4.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 Gene3D G3DSA:3.40.50.300 76 347 2.5E-91 T 29-03-2018 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.02 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 SUPERFAMILY SSF47917 345 459 1.62E-55 T 29-03-2018 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 4.1E-64 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 SUPERFAMILY SSF50615 1 75 1.18E-24 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.1E-263 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 Gene3D G3DSA:2.40.10.170 1 75 2.1E-30 T 29-03-2018 CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 SUPERFAMILY SSF52540 77 348 3.0E-90 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12935 b2bbabc8e93ea52cefe9253f21eb568a 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 Gene3D G3DSA:3.40.190.10 96 178 3.9E-12 T 29-03-2018 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 SUPERFAMILY SSF46785 6 84 4.99E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 SUPERFAMILY SSF53850 94 291 5.79E-32 T 29-03-2018 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 2.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 Gene3D G3DSA:3.40.190.10 179 262 2.5E-18 T 29-03-2018 CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 Gene3D G3DSA:1.10.10.10 4 87 4.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05180 af27feb68ab323ce5360de510a47cf37 291 Pfam PF03466 LysR substrate binding domain 93 290 2.8E-32 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 1.1E-151 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 1.1E-103 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 5.5E-159 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS16130 c2e4eeb9717597aa0e06f70ca5f7154b 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CKQ55_RS00795 5e110ab8a9b55fa3392237d3d77aa9ee 57 Pfam PF01783 Ribosomal L32p protein family 2 57 4.8E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS00795 5e110ab8a9b55fa3392237d3d77aa9ee 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 5.2E-18 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS00795 5e110ab8a9b55fa3392237d3d77aa9ee 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.005 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS00795 5e110ab8a9b55fa3392237d3d77aa9ee 57 SUPERFAMILY SSF57829 2 55 4.33E-18 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CKQ55_RS23795 9b8d51be0caac7ab0ef119d5eba25e22 289 Pfam PF05425 Copper resistance protein D 187 282 6.9E-20 T 29-03-2018 IPR008457 Copper resistance protein D GO:0016021 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 SMART SM00278 556 575 1.1 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 SMART SM00278 588 607 260.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Pfam PF14520 Helix-hairpin-helix domain 558 607 8.8E-7 T 29-03-2018 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Gene3D G3DSA:4.10.860.10 182 242 2.0E-15 T 29-03-2018 IPR001943 UVR domain GO:0005515 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 SUPERFAMILY SSF82771 17 100 5.23E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 SUPERFAMILY SSF47781 521 607 3.5E-17 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 1.1E-233 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 SUPERFAMILY SSF46600 190 243 9.68E-14 T 29-03-2018 IPR001943 UVR domain GO:0005515 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.6E-10 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Pfam PF02151 UvrB/uvrC motif 205 237 2.2E-9 T 29-03-2018 IPR001943 UVR domain GO:0005515 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 SMART SM00465 17 98 1.7E-23 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Gene3D G3DSA:1.10.150.20 526 567 0.19 T 29-03-2018 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.033 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 1.8E-45 T 29-03-2018 IPR001162 UvrC family homology region CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Gene3D G3DSA:3.40.1440.10 5 101 5.5E-23 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS23485 d8c56c4e77a43704e502306eaa9d1d34 610 Gene3D G3DSA:1.10.150.20 568 610 2.2E-10 T 29-03-2018 CKQ55_RS28780 114423d2a06558f9c51ab6d202525e3b 326 Pfam PF03060 Nitronate monooxygenase 5 324 1.7E-54 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CKQ55_RS28780 114423d2a06558f9c51ab6d202525e3b 326 SUPERFAMILY SSF51412 4 322 2.52E-46 T 29-03-2018 CKQ55_RS28780 114423d2a06558f9c51ab6d202525e3b 326 Gene3D G3DSA:3.20.20.70 3 325 1.8E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 Gene3D G3DSA:3.40.640.10 173 289 1.7E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 400 2.4E-225 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.976 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 Pfam PF00202 Aminotransferase class-III 22 395 1.5E-127 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 SUPERFAMILY SSF53383 12 396 1.61E-128 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 2.4E-165 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 Gene3D G3DSA:3.90.1150.10 290 405 4.1E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 Gene3D G3DSA:3.90.1150.10 2 172 1.2E-48 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS29720 44d694fc0b3b0bba19e28cc1309d58e3 406 PIRSF PIRSF000521 26 400 4.6E-43 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 200.984 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 8 370 2.2E-192 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 Pfam PF00266 Aminotransferase class-V 48 330 4.3E-22 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 PIRSF PIRSF000524 3 370 4.9E-58 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 11 367 4.1E-153 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 Gene3D G3DSA:3.90.1150.10 260 370 9.6E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 Gene3D G3DSA:3.40.640.10 21 259 4.9E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS13280 b4d29adba5c7ccaf6362deb3b6cebbfd 371 SUPERFAMILY SSF53383 10 367 1.12E-82 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS02455 2cae0ddd0de94737e45fabb1cb011a75 400 Gene3D G3DSA:1.20.1250.20 208 394 1.7E-25 T 29-03-2018 CKQ55_RS02455 2cae0ddd0de94737e45fabb1cb011a75 400 Pfam PF07690 Major Facilitator Superfamily 224 387 9.4E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS02455 2cae0ddd0de94737e45fabb1cb011a75 400 SUPERFAMILY SSF103473 12 391 2.22E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS02455 2cae0ddd0de94737e45fabb1cb011a75 400 Gene3D G3DSA:1.20.1250.20 11 207 5.7E-15 T 29-03-2018 CKQ55_RS23300 363700ed6829442f666728c371d4a75a 361 Gene3D G3DSA:1.20.1600.10 38 277 3.4E-19 T 29-03-2018 CKQ55_RS23300 363700ed6829442f666728c371d4a75a 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 355 7.5E-71 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS23300 363700ed6829442f666728c371d4a75a 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 243 1.1E-11 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS23300 363700ed6829442f666728c371d4a75a 361 SUPERFAMILY SSF111369 48 209 7.72E-23 T 29-03-2018 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 Gene3D G3DSA:3.40.50.1170 1 208 7.9E-80 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 SMART SM00870 5 323 2.3E-139 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 Pfam PF00710 Asparaginase, N-terminal 6 187 2.1E-64 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 PIRSF PIRSF001220 1 334 6.9E-94 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 Gene3D G3DSA:3.40.50.40 210 337 5.4E-41 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.3E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.3E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.3E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.3E-133 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 SUPERFAMILY SSF53774 3 335 5.76E-112 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CKQ55_RS29815 3f94b42f3c6e54bb4a58712e4f9300a6 338 PIRSF PIRSF500176 2 332 4.3E-115 T 29-03-2018 CKQ55_RS02160 ecac41ed4e036582a42b68f876531246 421 Pfam PF03611 PTS system sugar-specific permease component 10 405 5.1E-122 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS08075 8290639229f30cb1d25f06d976305a03 206 Pfam PF01121 Dephospho-CoA kinase 4 177 1.9E-71 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CKQ55_RS08075 8290639229f30cb1d25f06d976305a03 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 190 1.7E-63 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CKQ55_RS08075 8290639229f30cb1d25f06d976305a03 206 SUPERFAMILY SSF52540 1 191 5.43E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08075 8290639229f30cb1d25f06d976305a03 206 Gene3D G3DSA:3.40.50.300 2 206 5.3E-44 T 29-03-2018 CKQ55_RS08075 8290639229f30cb1d25f06d976305a03 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 26.987 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 390 9.7E-78 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 Gene3D G3DSA:1.10.287.470 128 191 1.2E-12 T 29-03-2018 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 415 53.317 T 29-03-2018 IPR022824 Multidrug resistance protein MdtA CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 Gene3D G3DSA:2.40.50.100 192 376 1.4E-4 T 29-03-2018 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 Pfam PF13533 Biotin-lipoyl like 87 135 1.3E-15 T 29-03-2018 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 Pfam PF13437 HlyD family secretion protein 198 298 3.7E-7 T 29-03-2018 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 Gene3D G3DSA:2.40.50.100 54 119 4.0E-8 T 29-03-2018 CKQ55_RS22445 05321ffed1e1ee82b4caf14286cdb74d 417 SUPERFAMILY SSF111369 79 313 1.57E-54 T 29-03-2018 CKQ55_RS19735 111ca73783bf1850d9fa36fc04b64a55 82 Gene3D G3DSA:3.30.1320.10 1 79 8.5E-32 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19735 111ca73783bf1850d9fa36fc04b64a55 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.5E-27 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19735 111ca73783bf1850d9fa36fc04b64a55 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 29-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS19735 111ca73783bf1850d9fa36fc04b64a55 82 SUPERFAMILY SSF54565 1 79 2.09E-28 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19735 111ca73783bf1850d9fa36fc04b64a55 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.587 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19735 111ca73783bf1850d9fa36fc04b64a55 82 Pfam PF00886 Ribosomal protein S16 8 68 2.7E-23 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS07580 7c19047199bf11e7ce780af53a93e6ca 285 Pfam PF01148 Cytidylyltransferase family 4 278 1.3E-69 T 29-03-2018 CKQ55_RS07580 7c19047199bf11e7ce780af53a93e6ca 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.2E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 310 5.0E-30 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 Gene3D G3DSA:3.40.50.2300 63 172 1.5E-25 T 29-03-2018 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 SUPERFAMILY SSF47413 5 62 2.38E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 SMART SM00354 5 75 3.8E-26 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 Gene3D G3DSA:3.40.50.2300 173 331 1.3E-37 T 29-03-2018 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 SUPERFAMILY SSF53822 63 316 3.0E-60 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS14910 b11659212bd890d2453561fcfcf51263 331 Gene3D G3DSA:1.10.260.40 7 62 5.6E-14 T 29-03-2018 CKQ55_RS01815 788a85d9a493fbc4a3434f04781a3395 184 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 181 3.2E-47 T 29-03-2018 IPR005247 YbhB/YbcL CKQ55_RS01815 788a85d9a493fbc4a3434f04781a3395 184 Gene3D G3DSA:3.90.280.10 13 182 2.5E-50 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CKQ55_RS01815 788a85d9a493fbc4a3434f04781a3395 184 Pfam PF01161 Phosphatidylethanolamine-binding protein 49 180 2.2E-36 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CKQ55_RS01815 788a85d9a493fbc4a3434f04781a3395 184 SUPERFAMILY SSF49777 24 180 4.84E-52 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CKQ55_RS04955 40ddf4b54aed49dc530e86fd30729410 227 SUPERFAMILY SSF49354 18 146 7.59E-8 T 29-03-2018 IPR008962 PapD-like CKQ55_RS04955 40ddf4b54aed49dc530e86fd30729410 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 40 147 1.8E-5 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS04955 40ddf4b54aed49dc530e86fd30729410 227 Gene3D G3DSA:2.60.40.10 21 146 2.2E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 Gene3D G3DSA:3.40.50.2300 58 166 2.6E-24 T 29-03-2018 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 Gene3D G3DSA:1.10.260.40 2 57 2.2E-22 T 29-03-2018 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 SMART SM00354 1 71 4.9E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 SUPERFAMILY SSF47413 1 59 2.17E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 Gene3D G3DSA:3.40.50.2300 167 331 3.1E-47 T 29-03-2018 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 Pfam PF13377 Periplasmic binding protein-like domain 168 329 5.9E-36 T 29-03-2018 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.9E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 SUPERFAMILY SSF53822 60 331 1.12E-82 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS18035 1b1adb3386d44bf7d6f98d368b9acc5d 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 SUPERFAMILY SSF54534 80 155 4.05E-20 T 29-03-2018 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 Gene3D G3DSA:1.10.287.180 3 75 4.5E-28 T 29-03-2018 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 7.5E-85 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 3.0E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.3E-25 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 PIRSF PIRSF006092 1 157 6.7E-45 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 Gene3D G3DSA:3.10.50.30 76 159 1.5E-21 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 53.182 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 SUPERFAMILY SSF46557 3 78 3.27E-27 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CKQ55_RS14400 f571d29e27b471d654bdeb74237378d5 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.317 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CKQ55_RS26850 61bcb903b15e9941d2fdbb43879e81e6 208 Pfam PF06353 Protein of unknown function (DUF1062) 36 166 7.7E-36 T 29-03-2018 IPR009412 Protein of unknown function DUF1062 CKQ55_RS26850 61bcb903b15e9941d2fdbb43879e81e6 208 PIRSF PIRSF021719 1 201 1.1E-63 T 29-03-2018 IPR009412 Protein of unknown function DUF1062 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 PIRSF PIRSF006288 20 886 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 SUPERFAMILY SSF55021 703 762 2.08E-9 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 SUPERFAMILY SSF55021 812 870 8.02E-10 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Gene3D G3DSA:3.30.70.260 806 883 3.8E-11 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Pfam PF01966 HD domain 465 598 6.2E-17 T 29-03-2018 IPR006674 HD domain CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Gene3D G3DSA:3.30.460.10 49 183 2.3E-23 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Gene3D G3DSA:1.20.120.330 187 331 2.1E-22 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 SMART SM00471 461 608 4.6E-11 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 SUPERFAMILY SSF81593 209 325 6.28E-9 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Pfam PF08335 GlnD PII-uridylyltransferase 190 328 9.0E-34 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Gene3D G3DSA:1.10.3090.10 360 667 7.0E-37 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 SUPERFAMILY SSF81301 4 185 2.14E-22 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Pfam PF01909 Nucleotidyltransferase domain 83 134 3.5E-7 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Gene3D G3DSA:3.30.70.260 695 792 1.4E-9 T 29-03-2018 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 887 345.068 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 46 881 8.7E-300 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Pfam PF01842 ACT domain 814 871 5.7E-9 T 29-03-2018 IPR002912 ACT domain CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 Pfam PF01842 ACT domain 706 755 2.9E-7 T 29-03-2018 IPR002912 ACT domain CKQ55_RS07630 395bf5d39e69882240823ca743c455f0 887 SUPERFAMILY SSF109604 454 596 4.03E-14 T 29-03-2018 CKQ55_RS04065 3c346d39f5c334d9027f036341f6e0d9 303 Gene3D G3DSA:3.40.190.10 171 303 2.3E-19 T 29-03-2018 CKQ55_RS04065 3c346d39f5c334d9027f036341f6e0d9 303 SMART SM00062 42 274 6.5E-66 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS04065 3c346d39f5c334d9027f036341f6e0d9 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 272 1.5E-46 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS04065 3c346d39f5c334d9027f036341f6e0d9 303 SUPERFAMILY SSF53850 5 275 2.57E-63 T 29-03-2018 CKQ55_RS04065 3c346d39f5c334d9027f036341f6e0d9 303 Gene3D G3DSA:3.40.190.10 2 170 5.3E-33 T 29-03-2018 CKQ55_RS29025 632f78d5b3ebe19cb3991429a9872a81 256 Gene3D G3DSA:1.10.3720.10 2 254 1.3E-25 T 29-03-2018 CKQ55_RS29025 632f78d5b3ebe19cb3991429a9872a81 256 SUPERFAMILY SSF161098 58 240 4.19E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29025 632f78d5b3ebe19cb3991429a9872a81 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 252 1.2E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27260 16f3a73082cfb3e24c8518774c17ea5e 155 Gene3D G3DSA:1.10.472.20 5 123 9.2E-30 T 29-03-2018 CKQ55_RS27260 16f3a73082cfb3e24c8518774c17ea5e 155 Pfam PF02211 Nitrile hydratase beta subunit 18 114 3.5E-8 T 29-03-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27260 16f3a73082cfb3e24c8518774c17ea5e 155 SUPERFAMILY SSF50090 14 144 7.06E-27 T 29-03-2018 IPR008990 Electron transport accessory protein-like domain CKQ55_RS27260 16f3a73082cfb3e24c8518774c17ea5e 155 TIGRFAM TIGR03889 nitrile_acc: nitrile hydratase accessory protein 23 95 3.6E-29 T 29-03-2018 IPR023808 Nitrile hydratase accessory protein, putative CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 SUPERFAMILY SSF51569 1 292 3.45E-100 T 29-03-2018 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.8E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.8E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.8E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.8E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 PIRSF PIRSF001365 1 292 2.2E-96 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.1E-120 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 2.9E-124 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 SMART SM01130 1 290 8.5E-143 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 66.064 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS20385 d2f34486faadb41e1fc2934b52c5e5ac 292 Gene3D G3DSA:3.20.20.70 1 292 2.8E-92 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 Gene3D G3DSA:3.40.50.2300 66 176 2.4E-23 T 29-03-2018 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 SUPERFAMILY SSF53822 66 318 5.84E-53 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 8.1E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 Pfam PF13377 Periplasmic binding protein-like domain 177 333 9.0E-27 T 29-03-2018 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 SUPERFAMILY SSF47413 9 67 1.13E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 Gene3D G3DSA:3.40.50.2300 177 334 4.6E-39 T 29-03-2018 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 Gene3D G3DSA:1.10.260.40 11 65 1.1E-18 T 29-03-2018 CKQ55_RS27840 9043207606fa355453a2dc11acfbd542 334 SMART SM00354 9 79 1.7E-24 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 Gene3D G3DSA:1.10.260.40 45 72 2.4E-11 T 29-03-2018 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 Gene3D G3DSA:1.10.357.10 73 185 0.0013 T 29-03-2018 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.2E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 6.2E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 Gene3D G3DSA:1.10.10.60 2 44 3.8E-11 T 29-03-2018 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 SUPERFAMILY SSF46689 12 85 5.82E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS09305 fded458dc5f4191d1ec946b57d15bdd7 194 SUPERFAMILY SSF48498 97 192 1.13E-27 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS17585 13250f712c31426c3e075101e804a004 253 Gene3D G3DSA:1.20.1290.10 10 253 4.4E-34 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS17585 13250f712c31426c3e075101e804a004 253 Pfam PF02627 Carboxymuconolactone decarboxylase family 166 247 7.3E-9 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS17585 13250f712c31426c3e075101e804a004 253 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 106 1.3E-4 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS17585 13250f712c31426c3e075101e804a004 253 SUPERFAMILY SSF69118 23 240 1.77E-37 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS10340 acbe3b18b4cc2e7fe3d52e3db26a3492 282 SUPERFAMILY SSF51735 2 255 4.55E-65 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS10340 acbe3b18b4cc2e7fe3d52e3db26a3492 282 Pfam PF05368 NmrA-like family 2 220 6.2E-25 T 29-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 CKQ55_RS10340 acbe3b18b4cc2e7fe3d52e3db26a3492 282 Gene3D G3DSA:3.40.50.720 1 145 7.5E-22 T 29-03-2018 CKQ55_RS10340 acbe3b18b4cc2e7fe3d52e3db26a3492 282 Gene3D G3DSA:3.90.25.10 146 282 3.5E-4 T 29-03-2018 CKQ55_RS07585 64e3d7adc985e56c57a71efe9e230299 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 2.1E-103 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CKQ55_RS07585 64e3d7adc985e56c57a71efe9e230299 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 4.9E-80 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CKQ55_RS07585 64e3d7adc985e56c57a71efe9e230299 252 Gene3D G3DSA:3.40.1180.10 2 247 1.0E-89 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CKQ55_RS07585 64e3d7adc985e56c57a71efe9e230299 252 SUPERFAMILY SSF64005 18 239 6.02E-85 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CKQ55_RS07585 64e3d7adc985e56c57a71efe9e230299 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CKQ55_RS07585 64e3d7adc985e56c57a71efe9e230299 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.437 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CKQ55_RS30385 752c7a748171aa411bad04285d9a0b24 141 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 45 141 5.0E-53 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS30385 752c7a748171aa411bad04285d9a0b24 141 Pfam PF03230 Antirestriction protein 48 141 6.1E-26 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS11145 a2fc0319e74ebc75b2e39c4753666c9d 70 Pfam PF05532 CsbD-like 5 57 5.5E-23 T 29-03-2018 IPR008462 CsbD-like domain CKQ55_RS11145 a2fc0319e74ebc75b2e39c4753666c9d 70 PIRSF PIRSF039008 2 67 3.8E-32 T 29-03-2018 IPR026042 Stress response protein YjbJ CKQ55_RS11145 a2fc0319e74ebc75b2e39c4753666c9d 70 Gene3D G3DSA:1.10.1470.10 2 70 1.6E-25 T 29-03-2018 IPR008462 CsbD-like domain CKQ55_RS11145 a2fc0319e74ebc75b2e39c4753666c9d 70 SUPERFAMILY SSF69047 2 70 6.67E-28 T 29-03-2018 IPR008462 CsbD-like domain CKQ55_RS29955 9aef0155eba8cdd213ee54b363556243 230 Gene3D G3DSA:3.40.50.880 1 230 2.2E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29955 9aef0155eba8cdd213ee54b363556243 230 SUPERFAMILY SSF52317 6 228 6.17E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29955 9aef0155eba8cdd213ee54b363556243 230 Pfam PF00117 Glutamine amidotransferase class-I 27 224 2.7E-15 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS07650 7d8785adbaf6aa0732b29011d88358e0 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 380 1.3E-22 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CKQ55_RS07650 7d8785adbaf6aa0732b29011d88358e0 385 Gene3D G3DSA:1.10.10.60 308 359 1.5E-5 T 29-03-2018 CKQ55_RS07650 7d8785adbaf6aa0732b29011d88358e0 385 Pfam PF05651 Putative sugar diacid recognition 6 138 5.5E-49 T 29-03-2018 IPR008599 Putative sugar diacid recognition CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 Gene3D G3DSA:3.40.50.1820 398 671 5.8E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 404 1.1E-106 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 SUPERFAMILY SSF53474 414 655 4.14E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 3.4E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 3.4E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 3.4E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 3.4E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 3.4E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 3.4E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 SUPERFAMILY SSF50993 2 408 9.42E-82 T 29-03-2018 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 Gene3D G3DSA:2.130.10.120 72 397 9.8E-50 T 29-03-2018 CKQ55_RS23775 dbe228d6133b3a054d073bb75afd559d 686 Pfam PF00326 Prolyl oligopeptidase family 463 675 3.3E-67 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CKQ55_RS22395 b5144c38b7292efa9368c0c6cfce9206 812 Gene3D G3DSA:1.20.58.60 130 738 0.19 T 29-03-2018 CKQ55_RS22395 b5144c38b7292efa9368c0c6cfce9206 812 Pfam PF10145 Phage-related minor tail protein 240 440 8.6E-36 T 29-03-2018 IPR010090 Phage tail tape measure protein CKQ55_RS22395 b5144c38b7292efa9368c0c6cfce9206 812 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 202 548 1.3E-96 T 29-03-2018 IPR010090 Phage tail tape measure protein CKQ55_RS04145 fb229fe00b221e6c0fe258deabeb8867 370 Pfam PF01098 Cell cycle protein 20 364 4.2E-125 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CKQ55_RS04145 fb229fe00b221e6c0fe258deabeb8867 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CKQ55_RS04145 fb229fe00b221e6c0fe258deabeb8867 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.1E-137 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CKQ55_RS12680 1c6facbf811a8793eb2abfa3650f4759 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.074 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CKQ55_RS12680 1c6facbf811a8793eb2abfa3650f4759 309 PIRSF PIRSF018296 1 309 3.5E-137 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CKQ55_RS12680 1c6facbf811a8793eb2abfa3650f4759 309 SUPERFAMILY SSF144020 24 306 2.75E-99 T 29-03-2018 IPR024064 FdhE-like CKQ55_RS12680 1c6facbf811a8793eb2abfa3650f4759 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 9.4E-117 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CKQ55_RS12680 1c6facbf811a8793eb2abfa3650f4759 309 Gene3D G3DSA:3.90.1670.10 24 308 5.8E-102 T 29-03-2018 IPR024064 FdhE-like CKQ55_RS12680 1c6facbf811a8793eb2abfa3650f4759 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 1.3E-151 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 SUPERFAMILY SSF51182 93 183 3.51E-13 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 Gene3D G3DSA:1.10.260.40 8 76 3.7E-18 T 29-03-2018 CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 SMART SM00530 19 74 5.7E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 SUPERFAMILY SSF47413 14 77 8.16E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 Pfam PF01381 Helix-turn-helix 20 74 1.8E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 Gene3D G3DSA:2.60.120.10 90 189 3.7E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28500 d702bb2d544793bd7a039ad9ff179133 189 Pfam PF07883 Cupin domain 114 180 1.2E-6 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS16925 2c36ef86323eaac91e57915a308fc641 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 6.7E-36 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 CKQ55_RS16925 2c36ef86323eaac91e57915a308fc641 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.56 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CKQ55_RS16925 2c36ef86323eaac91e57915a308fc641 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 162 2.4E-77 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CKQ55_RS25595 db1489395d2716cf02b06c7c87391048 388 SUPERFAMILY SSF103473 5 378 1.7E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS25595 db1489395d2716cf02b06c7c87391048 388 Pfam PF07690 Major Facilitator Superfamily 10 341 5.1E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS25595 db1489395d2716cf02b06c7c87391048 388 Gene3D G3DSA:1.20.1250.20 4 190 2.6E-26 T 29-03-2018 CKQ55_RS25595 db1489395d2716cf02b06c7c87391048 388 Gene3D G3DSA:1.20.1250.20 191 388 5.3E-17 T 29-03-2018 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 3.9E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 3.9E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 79 8.6E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 SUPERFAMILY SSF46689 21 89 1.3E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 Gene3D G3DSA:1.10.10.60 10 78 4.2E-18 T 29-03-2018 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 167 219 2.1E-7 T 29-03-2018 CKQ55_RS06980 14e94c5e1c32268c14620c8077cba5cb 230 Gene3D G3DSA:1.10.357.10 79 224 3.9E-18 T 29-03-2018 CKQ55_RS30000 83857e813e5518972c600d9dfe42bab2 212 Pfam PF01810 LysE type translocator 18 209 4.4E-52 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS30000 83857e813e5518972c600d9dfe42bab2 212 PIRSF PIRSF006324 4 212 2.7E-59 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 Pfam PF14489 QueF-like protein 195 269 1.8E-26 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 PIRSF PIRSF004750 6 281 1.4E-127 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 9.1E-129 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 Gene3D G3DSA:3.30.1130.10 21 136 1.3E-39 T 29-03-2018 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 168.71 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 Gene3D G3DSA:3.30.1130.10 144 281 4.9E-50 T 29-03-2018 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 SUPERFAMILY SSF55620 185 267 4.45E-10 T 29-03-2018 CKQ55_RS18525 99fef8af0d1b2726390b62038a5c5a4d 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 1.4E-47 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CKQ55_RS29370 649d805854c1619497fe1fb62a268819 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS29370 649d805854c1619497fe1fb62a268819 269 Pfam PF00005 ABC transporter 31 178 1.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29370 649d805854c1619497fe1fb62a268819 269 SMART SM00382 39 228 6.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29370 649d805854c1619497fe1fb62a268819 269 SUPERFAMILY SSF52540 5 251 2.61E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29370 649d805854c1619497fe1fb62a268819 269 Gene3D G3DSA:3.40.50.300 2 257 5.8E-65 T 29-03-2018 CKQ55_RS24045 e3b22b8735e402907439a29455e886fa 194 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 188 1.0E-69 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CKQ55_RS24045 e3b22b8735e402907439a29455e886fa 194 PIRSF PIRSF004982 5 190 1.7E-52 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CKQ55_RS24045 e3b22b8735e402907439a29455e886fa 194 Pfam PF03843 Outer membrane lipoprotein Slp family 20 173 2.5E-48 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 48.87 T 29-03-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 Pfam PF03466 LysR substrate binding domain 87 267 1.3E-12 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 SUPERFAMILY SSF46785 2 85 6.17E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 Gene3D G3DSA:1.10.10.10 1 82 2.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 SUPERFAMILY SSF53850 89 267 1.77E-13 T 29-03-2018 CKQ55_RS12115 748e62685e1018915faae0964f34d11d 273 Gene3D G3DSA:3.40.190.10 83 227 8.6E-11 T 29-03-2018 CKQ55_RS29685 2fc197e18ebced713cc32cea74e13484 180 Pfam PF04011 LemA family 8 177 5.5E-54 T 29-03-2018 IPR007156 LemA CKQ55_RS29685 2fc197e18ebced713cc32cea74e13484 180 SUPERFAMILY SSF140478 25 169 1.01E-44 T 29-03-2018 IPR023353 LemA-like domain CKQ55_RS29685 2fc197e18ebced713cc32cea74e13484 180 Gene3D G3DSA:1.20.1440.20 12 179 5.0E-50 T 29-03-2018 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 SMART SM00344 2 111 3.2E-36 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.3E-10 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.3E-10 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.3E-10 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 Pfam PF13404 AsnC-type helix-turn-helix domain 2 43 1.0E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 1.1E-20 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 Gene3D G3DSA:3.30.70.920 55 148 2.5E-26 T 29-03-2018 CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 SUPERFAMILY SSF46785 1 61 1.93E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 SUPERFAMILY SSF54909 62 151 2.55E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS06140 78735a9d879c9f9168066a7a8a7e0ed6 152 Gene3D G3DSA:1.10.10.10 3 54 2.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29550 2e2bc620ee3d5f01413220525d1b9f10 234 Gene3D G3DSA:3.40.50.720 2 234 6.4E-36 T 29-03-2018 CKQ55_RS29550 2e2bc620ee3d5f01413220525d1b9f10 234 SUPERFAMILY SSF51735 6 234 4.5E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29550 2e2bc620ee3d5f01413220525d1b9f10 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29550 2e2bc620ee3d5f01413220525d1b9f10 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.8E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29550 2e2bc620ee3d5f01413220525d1b9f10 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.8E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29550 2e2bc620ee3d5f01413220525d1b9f10 234 Pfam PF00106 short chain dehydrogenase 6 195 2.0E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SUPERFAMILY SSF48452 477 633 5.25E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Gene3D G3DSA:1.25.40.10 579 689 8.4E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Pfam PF17128 Domain of unknown function (DUF5107) 40 344 2.7E-64 T 29-03-2018 IPR033396 Domain of unknown function DUF5107 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SMART SM00028 979 1012 230.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SMART SM00028 459 493 310.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SMART SM00028 568 601 38.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SMART SM00028 935 968 32.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SMART SM00028 744 777 0.0079 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SMART SM00028 778 812 12.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Pfam PF13432 Tetratricopeptide repeat 757 811 2.5E-5 T 29-03-2018 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Pfam PF13432 Tetratricopeptide repeat 898 964 1.4E-4 T 29-03-2018 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Gene3D G3DSA:1.25.40.10 992 1086 3.3E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Gene3D G3DSA:1.25.40.10 690 800 3.8E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SUPERFAMILY SSF48452 742 818 1.36E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 SUPERFAMILY SSF48452 897 1008 1.36E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Gene3D G3DSA:1.25.40.10 883 991 2.0E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Gene3D G3DSA:1.25.40.10 801 835 6.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20070 fcb608153fa50603c3201299a94632aa 1091 Gene3D G3DSA:1.25.40.10 457 578 1.7E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 Gene3D G3DSA:1.10.287.1050 1 57 9.9E-20 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 Pfam PF00816 H-NS histone family 38 127 3.9E-19 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 SUPERFAMILY SSF81273 4 58 4.51E-15 T 29-03-2018 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 PIRSF PIRSF002096 1 133 9.0E-51 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 SUPERFAMILY SSF81273 91 133 6.28E-11 T 29-03-2018 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 Gene3D G3DSA:4.10.430.10 92 133 6.8E-18 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CKQ55_RS19420 80c51d47efcccd3f68f407d69f0a6c2e 133 SMART SM00528 86 133 1.1E-21 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CKQ55_RS24285 f80797a2c9df7bca9c8835242358c322 201 Pfam PF12804 MobA-like NTP transferase domain 9 164 3.4E-32 T 29-03-2018 IPR025877 MobA-like NTP transferase CKQ55_RS24285 f80797a2c9df7bca9c8835242358c322 201 Gene3D G3DSA:3.90.550.10 2 196 1.4E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS24285 f80797a2c9df7bca9c8835242358c322 201 SUPERFAMILY SSF53448 5 186 4.73E-25 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 Gene3D G3DSA:3.40.47.10 267 417 3.8E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 251 3.8E-31 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 SMART SM00825 Beta-ketoacyl synthase 10 416 1.7E-7 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 SUPERFAMILY SSF53901 219 415 5.77E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 373 1.5E-30 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 SUPERFAMILY SSF53901 9 258 1.5E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS18875 7d106dcee7e31f42342099d1c0abab35 417 Gene3D G3DSA:3.40.47.10 1 263 3.4E-47 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00790 59293632b12eef92d5937d5248c10d91 365 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 345 1.4E-143 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CKQ55_RS00790 59293632b12eef92d5937d5248c10d91 365 Gene3D G3DSA:3.40.718.10 1 340 3.4E-115 T 29-03-2018 CKQ55_RS00790 59293632b12eef92d5937d5248c10d91 365 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 138.848 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CKQ55_RS00790 59293632b12eef92d5937d5248c10d91 365 SUPERFAMILY SSF53659 4 340 1.27E-101 T 29-03-2018 CKQ55_RS00790 59293632b12eef92d5937d5248c10d91 365 Pfam PF02504 Fatty acid synthesis protein 5 331 4.5E-124 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CKQ55_RS00790 59293632b12eef92d5937d5248c10d91 365 PIRSF PIRSF002465 2 343 5.7E-126 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 SMART SM00387 315 425 2.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 5.3E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 SMART SM00388 211 271 1.6E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 SMART SM00304 158 210 7.0E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 Gene3D G3DSA:3.30.565.10 261 429 7.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 SUPERFAMILY SSF55874 261 423 1.57E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.1E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 SUPERFAMILY SSF47384 194 271 2.94E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS25840 ee2f46133e0551fd0f9d17b05c592ac7 433 Gene3D G3DSA:1.10.287.130 201 260 1.0E-9 T 29-03-2018 CKQ55_RS21585 b7c9c8dc8e691bc790f5229359983eb3 586 PIRSF PIRSF004950 6 586 4.3E-218 T 29-03-2018 IPR012159 Inner membrane protein YejM CKQ55_RS21585 b7c9c8dc8e691bc790f5229359983eb3 586 Pfam PF00884 Sulfatase 261 500 3.0E-26 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CKQ55_RS21585 b7c9c8dc8e691bc790f5229359983eb3 586 SUPERFAMILY SSF53649 258 553 9.16E-52 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS21585 b7c9c8dc8e691bc790f5229359983eb3 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 4.4E-103 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal CKQ55_RS21585 b7c9c8dc8e691bc790f5229359983eb3 586 Gene3D G3DSA:3.40.720.10 259 536 4.1E-32 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS18115 cc5bb5617a4fd6adca5b397bee40dcba 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 3.1E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS18115 cc5bb5617a4fd6adca5b397bee40dcba 155 SUPERFAMILY SSF54523 8 136 3.85E-6 T 29-03-2018 CKQ55_RS18115 cc5bb5617a4fd6adca5b397bee40dcba 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS18115 cc5bb5617a4fd6adca5b397bee40dcba 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 7.6E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS30450 133c5dfef4ecce77030309323485c6f2 339 Pfam PF02387 IncFII RepA protein family 54 329 1.2E-44 T 29-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 SMART SM00354 1 71 8.6E-34 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 Gene3D G3DSA:1.10.260.40 2 57 1.8E-24 T 29-03-2018 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 Gene3D G3DSA:3.40.50.2300 58 166 1.4E-22 T 29-03-2018 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 SUPERFAMILY SSF53822 61 331 6.67E-78 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 SUPERFAMILY SSF47413 1 59 1.32E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 Pfam PF13377 Periplasmic binding protein-like domain 169 329 2.9E-33 T 29-03-2018 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.8E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 Gene3D G3DSA:3.40.50.2300 167 332 2.0E-45 T 29-03-2018 CKQ55_RS21780 ccec6bacbb3b45847463f65992a3a4f1 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS21935 dbb3db16e936a616600d257c08afaf83 37 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 14.924 T 29-03-2018 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 CKQ55_RS10250 7bd397459ed7d94dae5c1e8e6a88eab2 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 7.0E-42 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS10250 7bd397459ed7d94dae5c1e8e6a88eab2 328 Gene3D G3DSA:1.10.3470.10 30 310 2.2E-27 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 SUPERFAMILY SSF50156 237 344 1.16E-20 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 Gene3D G3DSA:2.30.42.10 255 353 2.1E-21 T 29-03-2018 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 PRINTS PR00834 HtrA/DegQ protease family signature 148 172 2.5E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 2.5E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 PRINTS PR00834 HtrA/DegQ protease family signature 107 127 2.5E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 PRINTS PR00834 HtrA/DegQ protease family signature 86 98 2.5E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 PRINTS PR00834 HtrA/DegQ protease family signature 295 307 2.5E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 PRINTS PR00834 HtrA/DegQ protease family signature 183 200 2.5E-48 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 Pfam PF13180 PDZ domain 255 345 3.2E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 Pfam PF13365 Trypsin-like peptidase domain 77 212 2.7E-30 T 29-03-2018 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 4 350 2.3E-168 T 29-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 Gene3D G3DSA:2.40.10.10 149 254 3.2E-31 T 29-03-2018 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 Gene3D G3DSA:2.40.10.10 42 148 8.1E-31 T 29-03-2018 CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 SUPERFAMILY SSF50494 45 251 1.0E-60 T 29-03-2018 IPR009003 Peptidase S1, PA clan CKQ55_RS15780 ba6d594be9338120bf9ee52e10d6dc19 353 SMART SM00228 254 337 1.2E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS28570 bdd09811326c3fe36182da8f667988fa 243 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 191 1.7E-36 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS28570 bdd09811326c3fe36182da8f667988fa 243 SUPERFAMILY SSF53639 3 218 1.18E-52 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS28570 bdd09811326c3fe36182da8f667988fa 243 Gene3D G3DSA:3.40.225.10 2 241 2.5E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS28570 bdd09811326c3fe36182da8f667988fa 243 SMART SM01007 11 192 1.1E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS01180 78a45741b5bb0d2839724a866c869c22 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01180 78a45741b5bb0d2839724a866c869c22 495 Gene3D G3DSA:3.40.309.10 283 475 1.4E-66 T 29-03-2018 CKQ55_RS01180 78a45741b5bb0d2839724a866c869c22 495 SUPERFAMILY SSF53720 9 491 2.36E-164 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01180 78a45741b5bb0d2839724a866c869c22 495 Gene3D G3DSA:3.40.605.10 6 282 1.7E-99 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01180 78a45741b5bb0d2839724a866c869c22 495 Pfam PF00171 Aldehyde dehydrogenase family 33 489 1.4E-168 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01180 78a45741b5bb0d2839724a866c869c22 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 Pfam PF00005 ABC transporter 21 169 9.4E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 Pfam PF00005 ABC transporter 269 423 1.2E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 SUPERFAMILY SSF52540 4 228 1.09E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 Gene3D G3DSA:3.40.50.300 1 250 7.5E-51 T 29-03-2018 CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 Gene3D G3DSA:3.40.50.300 266 496 9.0E-40 T 29-03-2018 CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 SUPERFAMILY SSF52540 253 482 2.26E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 SMART SM00382 29 219 7.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12850 c627034712cdefa5a21f209622ed52de 501 SMART SM00382 277 472 1.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 SMART SM00079 22 243 0.0057 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 SUPERFAMILY SSF53850 1 242 6.34E-73 T 29-03-2018 CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 3.2E-89 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 7.7E-72 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 Gene3D G3DSA:3.40.190.10 146 241 2.1E-18 T 29-03-2018 CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 SMART SM00062 22 243 4.2E-89 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS02370 a4af73703bf7e7cce34b8de3c2c677a7 243 Gene3D G3DSA:3.40.190.10 11 145 5.3E-38 T 29-03-2018 CKQ55_RS28455 71b907de0c79f26200de8e1959be0a95 159 Gene3D G3DSA:1.10.10.10 3 146 1.1E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28455 71b907de0c79f26200de8e1959be0a95 159 SUPERFAMILY SSF46785 1 137 2.86E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28455 71b907de0c79f26200de8e1959be0a95 159 Pfam PF02082 Transcriptional regulator 2 82 1.2E-13 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CKQ55_RS13640 8e5967c0d6525b49b0d5e5ca8e66ddf5 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.0E-36 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CKQ55_RS13640 8e5967c0d6525b49b0d5e5ca8e66ddf5 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.859 T 29-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CKQ55_RS13640 8e5967c0d6525b49b0d5e5ca8e66ddf5 229 Gene3D G3DSA:3.40.1280.10 1 190 3.0E-47 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS13640 8e5967c0d6525b49b0d5e5ca8e66ddf5 229 SUPERFAMILY SSF75217 4 174 2.55E-49 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS13640 8e5967c0d6525b49b0d5e5ca8e66ddf5 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.2E-24 T 29-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 Gene3D G3DSA:1.10.10.10 2 151 1.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 6.9E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 6.9E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 6.9E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 6.9E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 Pfam PF01047 MarR family 47 98 2.8E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 SUPERFAMILY SSF46785 35 148 4.5E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29535 bdc76c960675c270526c30b82b7174d4 151 SMART SM00347 32 134 1.8E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 SUPERFAMILY SSF47729 1 90 2.94E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 SMART SM00411 1 90 8.0E-44 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 Gene3D G3DSA:4.10.520.10 1 90 1.4E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.7E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.7E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.7E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS11465 152ca279d52734b490f3236532af74b5 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 9.3E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 Gene3D G3DSA:3.40.50.1220 197 340 5.0E-27 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 SUPERFAMILY SSF52518 357 542 3.4E-43 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 PIRSF PIRSF036565 1 552 1.3E-209 T 29-03-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 179 6.2E-33 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 Gene3D G3DSA:3.40.50.970 341 543 3.9E-34 T 29-03-2018 CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 Gene3D G3DSA:3.40.50.970 1 196 3.1E-45 T 29-03-2018 CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 SUPERFAMILY SSF52467 167 338 3.02E-32 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 SUPERFAMILY SSF52518 5 182 1.33E-41 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 528 4.1E-18 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS20765 d187c29378a069b64a5815db2db4afc8 553 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 317 2.0E-19 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS18230 fd81c6738f5ff4de2908be2277f93eb1 160 SMART SM00877 10 87 5.3E-26 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18230 fd81c6738f5ff4de2908be2277f93eb1 160 SUPERFAMILY SSF143414 10 96 3.66E-23 T 29-03-2018 CKQ55_RS18230 fd81c6738f5ff4de2908be2277f93eb1 160 Pfam PF00936 BMC domain 11 87 4.0E-20 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18230 fd81c6738f5ff4de2908be2277f93eb1 160 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 10 72 9.0E-28 T 29-03-2018 CKQ55_RS04440 4eed35c45f1c07230889e4a0c5d4366f 319 Gene3D G3DSA:3.40.50.1980 22 155 2.0E-20 T 29-03-2018 CKQ55_RS04440 4eed35c45f1c07230889e4a0c5d4366f 319 Gene3D G3DSA:3.40.50.1980 156 319 1.7E-32 T 29-03-2018 CKQ55_RS04440 4eed35c45f1c07230889e4a0c5d4366f 319 Pfam PF01497 Periplasmic binding protein 49 296 3.9E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS04440 4eed35c45f1c07230889e4a0c5d4366f 319 SUPERFAMILY SSF53807 31 318 4.32E-46 T 29-03-2018 CKQ55_RS12755 a7c5825da823bb2c9f58c310c907d072 168 Pfam PF04220 Der GTPase activator (YihI) 10 164 6.4E-54 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 CKQ55_RS12755 a7c5825da823bb2c9f58c310c907d072 168 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 7 167 16.456 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 503 820 2.5E-93 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 Pfam PF12795 Mechanosensitive ion channel porin domain 44 283 2.7E-63 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 Gene3D G3DSA:2.30.30.60 940 990 5.7E-13 T 29-03-2018 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 SUPERFAMILY SSF50182 924 989 1.01E-16 T 29-03-2018 IPR010920 LSM domain CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 Pfam PF00924 Mechanosensitive ion channel 881 1080 2.2E-59 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 SUPERFAMILY SSF82689 991 1091 5.75E-27 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 953 987 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 Gene3D G3DSA:3.30.70.100 991 1085 1.1E-20 T 29-03-2018 CKQ55_RS05945 3fdd047c93a5af269ba5c3daf6fd037b 1113 SUPERFAMILY SSF82861 839 922 6.28E-9 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 Gene3D G3DSA:3.30.70.270 249 415 1.5E-21 T 29-03-2018 CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 46 164 2.2E-50 T 29-03-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 SUPERFAMILY SSF141868 423 668 1.57E-72 T 29-03-2018 IPR001633 EAL domain CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 SMART SM00052 418 663 4.9E-99 T 29-03-2018 IPR001633 EAL domain CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 Gene3D G3DSA:3.20.20.450 416 667 2.2E-81 T 29-03-2018 IPR001633 EAL domain CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 Pfam PF00563 EAL domain 425 656 2.0E-57 T 29-03-2018 IPR001633 EAL domain CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 SUPERFAMILY SSF55073 259 410 7.3E-16 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 404 5.4E-9 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS14295 2335a734d8fcdcd62927fe9e640d29de 678 SMART SM00267 241 408 1.9E-25 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS02320 247cae147393fe7350a48c4a97c6f5ee 333 Gene3D G3DSA:3.90.1150.10 248 333 4.6E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS02320 247cae147393fe7350a48c4a97c6f5ee 333 PIRSF PIRSF017617 1 333 3.9E-130 T 29-03-2018 IPR023603 Threonine aldolase CKQ55_RS02320 247cae147393fe7350a48c4a97c6f5ee 333 SUPERFAMILY SSF53383 1 332 1.32E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS02320 247cae147393fe7350a48c4a97c6f5ee 333 Gene3D G3DSA:3.40.640.10 17 247 1.2E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS02320 247cae147393fe7350a48c4a97c6f5ee 333 Pfam PF01212 Beta-eliminating lyase 3 282 6.8E-95 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Pfam PF00581 Rhodanese-like domain 272 350 4.8E-5 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Pfam PF00581 Rhodanese-like domain 131 225 2.2E-9 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Pfam PF00581 Rhodanese-like domain 11 101 1.3E-8 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Pfam PF00581 Rhodanese-like domain 378 466 1.5E-4 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SUPERFAMILY SSF52821 255 350 1.11E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Gene3D G3DSA:3.40.250.10 8 121 1.8E-18 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Gene3D G3DSA:3.40.250.10 250 374 4.5E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Gene3D G3DSA:3.40.250.10 122 249 6.5E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SUPERFAMILY SSF52821 6 120 6.42E-23 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SMART SM00450 376 471 0.0067 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SMART SM00450 266 362 5.2E-4 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SMART SM00450 131 229 2.0E-4 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SMART SM00450 8 105 4.2E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SUPERFAMILY SSF52821 373 523 1.31E-27 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 Gene3D G3DSA:3.40.250.10 375 479 5.3E-16 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 SUPERFAMILY SSF52821 107 236 7.73E-30 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS25060 9694cd7b259460f74ab06e2c452df6ca 526 ProSitePatterns PS00380 Rhodanese signature 1. 401 412 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 Pfam PF00482 Type II secretion system (T2SS), protein F 275 394 1.3E-25 T 29-03-2018 IPR018076 Type II secretion system F domain CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 2.4E-31 T 29-03-2018 IPR018076 Type II secretion system F domain CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 Gene3D G3DSA:3.30.70.1120 89 172 1.8E-4 T 29-03-2018 CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 3 404 6.8E-160 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.0E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.0E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.0E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS04830 b16b6464055e57a61834c03657bbbcc0 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.0E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS01755 5c84cf741a696b967c184bbd7d1d51b3 163 SUPERFAMILY SSF52728 3 159 8.89E-51 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS01755 5c84cf741a696b967c184bbd7d1d51b3 163 Gene3D G3DSA:3.40.35.10 3 159 1.7E-53 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS01755 5c84cf741a696b967c184bbd7d1d51b3 163 Pfam PF03830 PTS system sorbose subfamily IIB component 4 150 3.2E-51 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS16035 e9dc25eba96542f3f6709ea43bc89155 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 9.9E-57 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CKQ55_RS16035 e9dc25eba96542f3f6709ea43bc89155 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 7.4E-94 T 29-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 CKQ55_RS16035 e9dc25eba96542f3f6709ea43bc89155 209 Gene3D G3DSA:3.40.50.150 1 209 1.1E-57 T 29-03-2018 CKQ55_RS16035 e9dc25eba96542f3f6709ea43bc89155 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.796 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CKQ55_RS16035 e9dc25eba96542f3f6709ea43bc89155 209 PIRSF PIRSF005461 1 209 1.8E-81 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CKQ55_RS16035 e9dc25eba96542f3f6709ea43bc89155 209 SUPERFAMILY SSF53335 31 208 2.11E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Gene3D G3DSA:3.40.1030.10 275 530 4.6E-91 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 5.1E-44 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 SUPERFAMILY SSF52418 269 527 4.19E-91 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 SUPERFAMILY SSF47648 200 266 4.84E-16 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 2.1E-5 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 2.1E-5 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 4.4E-15 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 7.6E-54 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Gene3D G3DSA:3.40.50.880 1 192 5.3E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 SUPERFAMILY SSF52317 3 191 9.9E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 4.5E-13 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 4.5E-13 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 4.5E-13 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Pfam PF00591 Glycosyl transferase family, a/b domain 272 521 1.4E-101 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 1.9E-128 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Gene3D G3DSA:1.20.970.10 193 274 7.9E-17 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.1E-33 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.1E-33 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.1E-33 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.1E-33 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.1E-33 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.1E-33 T 29-03-2018 CKQ55_RS29515 fe975314ba9b6a00421dfdb7bb9efe63 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.519 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 Pfam PF00390 Malic enzyme, N-terminal domain 77 257 7.7E-76 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 Pfam PF03949 Malic enzyme, NAD binding domain 267 526 1.6E-97 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 SUPERFAMILY SSF53223 4 266 1.44E-106 T 29-03-2018 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 SMART SM00919 267 527 2.4E-120 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 83 107 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 179 201 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 143 172 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 238 256 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 263 279 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 294 310 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PRINTS PR00072 Malic enzyme signature 404 420 2.4E-71 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 SUPERFAMILY SSF51735 267 557 5.07E-90 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 Gene3D G3DSA:3.40.50.10380 11 264 9.6E-113 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 PIRSF PIRSF000106 3 559 1.2E-220 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 Gene3D G3DSA:3.40.50.720 265 559 3.6E-102 T 29-03-2018 CKQ55_RS23720 4f51f6728618267c1829ae8926eea150 561 SMART SM01274 77 257 1.2E-101 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CKQ55_RS01230 b4dfc8e8a1534465fc9b3feec6587475 255 SUPERFAMILY SSF51197 17 253 2.29E-42 T 29-03-2018 CKQ55_RS01230 b4dfc8e8a1534465fc9b3feec6587475 255 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 29 215 2.6E-20 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CKQ55_RS01230 b4dfc8e8a1534465fc9b3feec6587475 255 Gene3D G3DSA:2.60.120.620 2 238 3.7E-33 T 29-03-2018 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 6.7E-154 T 29-03-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 Pfam PF01381 Helix-turn-helix 7 58 5.8E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 SUPERFAMILY SSF52540 232 386 1.06E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 SUPERFAMILY SSF47413 6 60 4.44E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 Gene3D G3DSA:3.40.50.620 63 230 2.6E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 Gene3D G3DSA:3.40.50.300 231 399 3.7E-14 T 29-03-2018 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 9.4E-19 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 PIRSF PIRSF004776 2 410 3.2E-210 T 29-03-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 SMART SM00530 6 62 2.4E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 Pfam PF13521 AAA domain 234 394 1.6E-29 T 29-03-2018 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 SUPERFAMILY SSF52374 66 229 9.01E-18 T 29-03-2018 CKQ55_RS08745 32358bbc6388b24a52f063fe1aeae52d 410 Gene3D G3DSA:1.10.260.40 4 61 2.4E-10 T 29-03-2018 CKQ55_RS03835 226601626663450b05f65588784f7d26 191 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 32.63 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CKQ55_RS03835 226601626663450b05f65588784f7d26 191 Pfam PF02669 K+-transporting ATPase, c chain 5 186 9.4E-67 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CKQ55_RS03835 226601626663450b05f65588784f7d26 191 PIRSF PIRSF001296 1 191 3.1E-72 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CKQ55_RS03835 226601626663450b05f65588784f7d26 191 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 1.1E-81 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CKQ55_RS17075 5a9274008035fc1dd8e941d69c60ad83 91 Gene3D G3DSA:1.10.3880.10 2 89 3.6E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CKQ55_RS17075 5a9274008035fc1dd8e941d69c60ad83 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 9.0E-38 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CKQ55_RS17075 5a9274008035fc1dd8e941d69c60ad83 91 PIRSF PIRSF029827 1 90 2.2E-44 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CKQ55_RS17075 5a9274008035fc1dd8e941d69c60ad83 91 SUPERFAMILY SSF111148 1 90 7.19E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CKQ55_RS17075 5a9274008035fc1dd8e941d69c60ad83 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 6.1E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CKQ55_RS17075 5a9274008035fc1dd8e941d69c60ad83 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.137 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CKQ55_RS16175 ac80e08c1f707a2dd42279889eda04a6 216 Gene3D G3DSA:3.40.50.720 2 212 2.6E-17 T 29-03-2018 CKQ55_RS16175 ac80e08c1f707a2dd42279889eda04a6 216 Pfam PF13460 NAD(P)H-binding 8 190 3.8E-10 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS16175 ac80e08c1f707a2dd42279889eda04a6 216 SUPERFAMILY SSF51735 2 197 1.35E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05775 fab47cf8e4a4a3d5b05901630f73e3f7 228 SMART SM00382 35 221 5.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS05775 fab47cf8e4a4a3d5b05901630f73e3f7 228 SUPERFAMILY SSF52540 6 226 3.36E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05775 fab47cf8e4a4a3d5b05901630f73e3f7 228 Pfam PF00005 ABC transporter 27 174 4.1E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS05775 fab47cf8e4a4a3d5b05901630f73e3f7 228 Gene3D G3DSA:3.40.50.300 2 228 2.8E-60 T 29-03-2018 CKQ55_RS05775 fab47cf8e4a4a3d5b05901630f73e3f7 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 SUPERFAMILY SSF53178 3 192 1.2E-70 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 Gene3D G3DSA:3.40.50.1470 1 194 4.1E-69 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.343 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 1.6E-71 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 188 1.5E-53 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CKQ55_RS24380 2efc0440268a606ce9f417989d1f866d 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CKQ55_RS28755 e446b8c677194fd55097d11cb99cd3d6 209 Gene3D G3DSA:2.60.120.10 11 116 4.1E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28755 e446b8c677194fd55097d11cb99cd3d6 209 Gene3D G3DSA:1.10.10.10 134 201 5.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28755 e446b8c677194fd55097d11cb99cd3d6 209 Pfam PF15977 Winged helix-turn-helix DNA binding 139 207 2.0E-27 T 29-03-2018 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 Gene3D G3DSA:3.30.280.10 2 99 6.3E-48 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 Pfam PF00547 Urease, gamma subunit 1 99 3.4E-47 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 PIRSF PIRSF001223 1 100 3.4E-51 T 29-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 4.0E-52 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-45 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 SUPERFAMILY SSF54111 1 99 3.79E-46 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS16690 6b4a08fadfac703b200a5f15a6711752 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.461 T 29-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 PIRSF PIRSF036979 15 313 1.9E-97 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 PRINTS PR00116 Arginase signature 235 264 3.5E-13 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 PRINTS PR00116 Arginase signature 122 137 3.5E-13 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 SUPERFAMILY SSF52768 14 309 1.19E-96 T 29-03-2018 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 Gene3D G3DSA:3.40.800.10 8 312 1.0E-93 T 29-03-2018 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 TIGRFAM TIGR01230 agmatinase: agmatinase 36 308 7.0E-58 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 Pfam PF00491 Arginase family 36 307 1.1E-82 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CKQ55_RS19585 164d8e1f6cdf2fa371a7b88ba5237afb 316 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CKQ55_RS31070 186fe846e9ffebd9e9fc0d76aae1a873 74 Pfam PF05509 TraY domain 16 60 2.8E-17 T 29-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 Pfam PF13337 Putative ATP-dependent Lon protease 30 484 2.7E-208 T 29-03-2018 IPR014061 Conserved hypothetical protein CHP02688 CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 Gene3D G3DSA:3.30.230.10 509 692 1.8E-21 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 SUPERFAMILY SSF52540 235 452 2.45E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 22 694 0.0 T 29-03-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 28 475 3.5E-185 T 29-03-2018 IPR014061 Conserved hypothetical protein CHP02688 CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 515 689 2.4E-13 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CKQ55_RS09810 d5c2f19221f0dbb0b516cf0092509d80 694 SUPERFAMILY SSF54211 513 693 6.83E-25 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS04250 04e76ae34da6d08e79d7696e663b2e4d 209 SUPERFAMILY SSF110849 46 179 8.37E-23 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS04250 04e76ae34da6d08e79d7696e663b2e4d 209 Pfam PF02195 ParB-like nuclease domain 50 145 4.8E-13 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS04250 04e76ae34da6d08e79d7696e663b2e4d 209 SMART SM00470 48 146 2.2E-7 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS04250 04e76ae34da6d08e79d7696e663b2e4d 209 Gene3D G3DSA:3.90.1530.10 40 150 1.5E-10 T 29-03-2018 CKQ55_RS07980 70f0b65c7404d3f6ddd4c41fb32be93e 120 PIRSF PIRSF006287 1 120 5.7E-49 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CKQ55_RS07980 70f0b65c7404d3f6ddd4c41fb32be93e 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 4.0E-57 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CKQ55_RS07980 70f0b65c7404d3f6ddd4c41fb32be93e 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.365 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CKQ55_RS07980 70f0b65c7404d3f6ddd4c41fb32be93e 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.1E-42 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CKQ55_RS28750 537870efcbf324d9dfdec5eec804d0d7 193 PRINTS PR01022 Outer membrane protein A signature 165 179 1.8E-7 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS28750 537870efcbf324d9dfdec5eec804d0d7 193 PRINTS PR01022 Outer membrane protein A signature 179 193 1.8E-7 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS28750 537870efcbf324d9dfdec5eec804d0d7 193 PRINTS PR01022 Outer membrane protein A signature 108 124 1.8E-7 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS28750 537870efcbf324d9dfdec5eec804d0d7 193 Pfam PF01389 OmpA-like transmembrane domain 25 193 6.1E-47 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CKQ55_RS28750 537870efcbf324d9dfdec5eec804d0d7 193 SUPERFAMILY SSF56925 23 192 2.88E-34 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS28750 537870efcbf324d9dfdec5eec804d0d7 193 Gene3D G3DSA:2.40.160.20 10 193 1.0E-33 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 SUPERFAMILY SSF53706 11 625 1.45E-153 T 29-03-2018 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Pfam PF00384 Molybdopterin oxidoreductase 52 508 2.3E-64 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Gene3D G3DSA:2.40.40.20 606 761 2.4E-31 T 29-03-2018 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Gene3D G3DSA:3.90.55.10 474 550 2.4E-26 T 29-03-2018 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Gene3D G3DSA:3.90.55.10 4 88 2.0E-10 T 29-03-2018 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Pfam PF01568 Molydopterin dinucleotide binding domain 624 744 3.6E-26 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Gene3D G3DSA:3.40.228.10 551 605 9.7E-7 T 29-03-2018 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 Gene3D G3DSA:3.40.228.10 152 453 1.3E-55 T 29-03-2018 CKQ55_RS04270 70f50827b514adbd3a2aa82ee7758ae8 769 SUPERFAMILY SSF50692 618 767 7.05E-43 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 8.0E-13 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.315 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 Gene3D G3DSA:3.30.300.130 103 187 2.5E-25 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 SUPERFAMILY SSF89360 1 97 2.75E-21 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 SUPERFAMILY SSF117916 95 184 9.59E-25 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 5.2E-101 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-26 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 Pfam PF01106 NifU-like domain 111 177 9.5E-20 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CKQ55_RS14440 6360424123ead80134968972c7d491e4 191 Gene3D G3DSA:2.60.300.12 1 102 1.6E-16 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS04450 77216f5ae346cc932880d968546be7c3 413 Gene3D G3DSA:1.20.1250.20 217 413 1.6E-14 T 29-03-2018 CKQ55_RS04450 77216f5ae346cc932880d968546be7c3 413 Pfam PF05977 Transmembrane secretion effector 16 407 9.9E-22 T 29-03-2018 IPR010290 Transmembrane secretion effector CKQ55_RS04450 77216f5ae346cc932880d968546be7c3 413 SUPERFAMILY SSF103473 16 408 4.32E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS04450 77216f5ae346cc932880d968546be7c3 413 Gene3D G3DSA:1.20.1250.20 9 211 4.0E-23 T 29-03-2018 CKQ55_RS10170 4c523d3c1a8822b10d551d8582539b9f 372 Pfam PF03841 L-seryl-tRNA selenium transferase 99 320 8.6E-13 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CKQ55_RS10170 4c523d3c1a8822b10d551d8582539b9f 372 Gene3D G3DSA:3.40.190.10 267 364 0.05 T 29-03-2018 CKQ55_RS10170 4c523d3c1a8822b10d551d8582539b9f 372 SUPERFAMILY SSF53383 7 368 1.46E-32 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS10170 4c523d3c1a8822b10d551d8582539b9f 372 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 365 3.6E-183 T 29-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CKQ55_RS10170 4c523d3c1a8822b10d551d8582539b9f 372 Gene3D G3DSA:3.40.640.10 43 247 4.3E-19 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 SUPERFAMILY SSF51735 7 257 1.26E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 Gene3D G3DSA:3.40.50.720 46 259 1.9E-49 T 29-03-2018 CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 Gene3D G3DSA:3.40.50.720 1 45 1.6E-10 T 29-03-2018 CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS01680 a0df8e29a39044c86c6815e752c6785c 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 1.4E-50 T 29-03-2018 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 PIRSF PIRSF000112 1 360 1.3E-92 T 29-03-2018 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 SUPERFAMILY SSF56796 2 356 1.13E-88 T 29-03-2018 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 Gene3D G3DSA:3.40.50.1970 1 159 2.6E-31 T 29-03-2018 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 Gene3D G3DSA:1.20.1090.10 160 363 1.8E-42 T 29-03-2018 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.1E-68 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS16610 bc460d36336ce1d6248e9eaf80572ddc 365 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS19620 bbcf7e7daaf2ae93329d486d449384eb 277 Pfam PF01844 HNH endonuclease 207 257 4.3E-15 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CKQ55_RS19620 bbcf7e7daaf2ae93329d486d449384eb 277 Gene3D G3DSA:3.40.1800.10 185 268 4.2E-17 T 29-03-2018 CKQ55_RS19620 bbcf7e7daaf2ae93329d486d449384eb 277 SMART SM00507 194 253 7.8E-15 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 Gene3D G3DSA:1.25.50.10 548 871 1.0E-124 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 Gene3D G3DSA:2.60.40.1730 15 195 5.3E-32 T 29-03-2018 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 SUPERFAMILY SSF55486 205 451 6.59E-76 T 29-03-2018 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 549 871 3.0E-120 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 1.5E-7 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 310 1.5E-7 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 177 192 1.5E-7 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 314 326 1.5E-7 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 870 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 SUPERFAMILY SSF63737 1 194 1.18E-44 T 29-03-2018 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 Pfam PF01433 Peptidase family M1 domain 209 440 5.5E-60 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 Gene3D G3DSA:1.10.390.10 281 444 7.1E-53 T 29-03-2018 CKQ55_RS01990 7d95e6cd3d9229804b08e2717906dcb1 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 445 546 1.7E-32 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 SUPERFAMILY SSF48179 622 714 3.91E-23 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 690 6.2E-6 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.0E-25 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 6.6E-61 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 SUPERFAMILY SSF48179 495 638 1.79E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.324 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Gene3D G3DSA:3.90.226.10 12 265 9.6E-54 T 29-03-2018 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Gene3D G3DSA:1.10.1040.10 622 714 1.2E-15 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 SUPERFAMILY SSF52096 3 303 6.5E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 SUPERFAMILY SSF51735 314 495 1.64E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Gene3D G3DSA:1.10.1040.10 503 592 8.3E-22 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 9.6E-39 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 Gene3D G3DSA:3.40.50.720 266 495 1.3E-60 T 29-03-2018 CKQ55_RS11685 7e89f7ed2fc20d41dde650da07b665e9 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Gene3D G3DSA:3.90.55.10 7 92 6.8E-13 T 29-03-2018 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Gene3D G3DSA:3.40.228.10 410 535 5.3E-6 T 29-03-2018 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 13 775 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Gene3D G3DSA:2.40.40.20 620 770 8.4E-31 T 29-03-2018 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 459 476 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Pfam PF01568 Molydopterin dinucleotide binding domain 637 748 6.3E-25 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Gene3D G3DSA:3.40.228.10 537 619 3.2E-10 T 29-03-2018 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Gene3D G3DSA:3.40.228.10 151 409 6.5E-57 T 29-03-2018 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 SUPERFAMILY SSF50692 628 774 4.07E-40 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 SUPERFAMILY SSF53706 14 628 1.96E-157 T 29-03-2018 CKQ55_RS14120 3b926eacf925ce34b3cbb516999737d2 776 Pfam PF00384 Molybdopterin oxidoreductase 56 517 2.8E-107 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 4.2E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 SUPERFAMILY SSF48452 439 803 1.49E-152 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 SMART SM00421 833 890 1.2E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 Gene3D G3DSA:1.25.40.10 436 808 1.9E-45 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 9.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 9.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 9.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 SUPERFAMILY SSF52540 6 231 1.75E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 39.218 T 29-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 SUPERFAMILY SSF46894 828 892 3.3E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 Gene3D G3DSA:3.40.50.300 2 174 1.2E-5 T 29-03-2018 CKQ55_RS14975 7b16b2ae99cf976fd1ec15d56a8bd809 901 Gene3D G3DSA:1.10.10.10 833 894 8.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 PRINTS PR01441 Cellulose synthase subunit C signature 496 516 5.4E-21 T 29-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 PRINTS PR01441 Cellulose synthase subunit C signature 159 171 5.4E-21 T 29-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 PRINTS PR01441 Cellulose synthase subunit C signature 1212 1236 5.4E-21 T 29-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 PRINTS PR01441 Cellulose synthase subunit C signature 189 206 5.4E-21 T 29-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 PRINTS PR01441 Cellulose synthase subunit C signature 1252 1273 5.4E-21 T 29-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Gene3D G3DSA:1.25.40.10 525 664 1.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Gene3D G3DSA:1.25.40.10 19 117 2.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Gene3D G3DSA:1.25.40.10 118 524 4.0E-35 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SUPERFAMILY SSF48452 691 811 7.97E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 926 1347 4.5E-137 T 29-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SMART SM00028 304 337 35.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SMART SM00028 785 818 450.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SMART SM00028 463 496 150.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SMART SM00028 270 303 310.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SMART SM00028 385 418 45.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SMART SM00028 41 74 30.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SUPERFAMILY SSF48452 41 111 1.64E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SUPERFAMILY SSF48452 175 192 1.64E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Gene3D G3DSA:2.40.128.130 1130 1346 6.4E-7 T 29-03-2018 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Pfam PF14559 Tetratricopeptide repeat 283 331 1.8E-5 T 29-03-2018 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Pfam PF13432 Tetratricopeptide repeat 354 418 5.5E-4 T 29-03-2018 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SUPERFAMILY SSF48452 276 339 4.87E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 SUPERFAMILY SSF48452 387 524 4.87E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS14215 76467e91a1aa324f72ad5ed78916e964 1350 Gene3D G3DSA:1.25.40.10 665 818 2.6E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 Gene3D G3DSA:2.60.40.1180 666 771 2.8E-33 T 29-03-2018 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 SUPERFAMILY SSF51445 263 603 1.92E-91 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 Pfam PF13802 Galactose mutarotase-like 160 218 1.3E-15 T 29-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 Pfam PF01055 Glycosyl hydrolases family 31 240 667 1.0E-119 T 29-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 SUPERFAMILY SSF51011 586 665 8.63E-20 T 29-03-2018 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 SUPERFAMILY SSF117125 666 772 1.31E-34 T 29-03-2018 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 SUPERFAMILY SSF74650 1 247 2.2E-65 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 Gene3D G3DSA:3.20.20.80 239 605 7.7E-111 T 29-03-2018 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 Gene3D G3DSA:2.60.40.1180 606 665 5.7E-19 T 29-03-2018 CKQ55_RS13505 da96ce4fe35e42ea9b0c4ac933d6cdc7 772 Gene3D G3DSA:2.60.40.1760 1 238 2.8E-55 T 29-03-2018 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.3E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 SMART SM00649 9 141 3.9E-84 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 SUPERFAMILY SSF54747 3 73 5.1E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 Gene3D G3DSA:3.30.1550.10 3 72 1.8E-34 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.4E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 SUPERFAMILY SSF46906 68 141 1.3E-25 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 Gene3D G3DSA:1.10.10.250 73 141 9.0E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 1.3E-65 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.706 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 29-03-2018 CKQ55_RS11575 e39cf72abc9ae5dfddb86f5cc1505bd1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 29-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 3.1E-50 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 3.1E-50 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 3.1E-50 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 3.1E-50 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 3.1E-50 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 3.1E-50 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 Gene3D G3DSA:3.40.50.1980 138 291 1.0E-26 T 29-03-2018 CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 SUPERFAMILY SSF53807 33 290 2.59E-56 T 29-03-2018 CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 Pfam PF01497 Periplasmic binding protein 38 269 4.3E-26 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS07705 1a9d592c02c984378b7395df9a229b04 296 Gene3D G3DSA:3.40.50.1980 23 137 7.3E-16 T 29-03-2018 CKQ55_RS18505 58d20f384a62482db6ed4a71d21236d1 313 Gene3D G3DSA:3.40.190.10 129 308 4.0E-36 T 29-03-2018 CKQ55_RS18505 58d20f384a62482db6ed4a71d21236d1 313 SUPERFAMILY SSF53850 25 256 1.6E-51 T 29-03-2018 CKQ55_RS18505 58d20f384a62482db6ed4a71d21236d1 313 Gene3D G3DSA:3.40.190.10 22 128 1.9E-14 T 29-03-2018 CKQ55_RS18505 58d20f384a62482db6ed4a71d21236d1 313 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 308 9.7E-70 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CKQ55_RS18505 58d20f384a62482db6ed4a71d21236d1 313 SMART SM00062 27 247 5.9E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS18505 58d20f384a62482db6ed4a71d21236d1 313 Pfam PF13379 NMT1-like family 24 247 2.9E-18 T 29-03-2018 CKQ55_RS18705 fa2fa2818ff14697d1a057fb8b3ea613 201 Pfam PF01583 Adenylylsulphate kinase 27 179 8.7E-73 T 29-03-2018 CKQ55_RS18705 fa2fa2818ff14697d1a057fb8b3ea613 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.584 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CKQ55_RS18705 fa2fa2818ff14697d1a057fb8b3ea613 201 Gene3D G3DSA:3.40.50.300 23 201 4.3E-49 T 29-03-2018 CKQ55_RS18705 fa2fa2818ff14697d1a057fb8b3ea613 201 SUPERFAMILY SSF52540 24 194 4.78E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18705 fa2fa2818ff14697d1a057fb8b3ea613 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 3.1E-88 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CKQ55_RS14200 845b1a0aee678c5f838ffd8cdc6a753a 267 SUPERFAMILY SSF52540 1 250 8.65E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14200 845b1a0aee678c5f838ffd8cdc6a753a 267 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 243 4.7E-38 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CKQ55_RS14200 845b1a0aee678c5f838ffd8cdc6a753a 267 Gene3D G3DSA:3.40.50.300 2 252 2.1E-38 T 29-03-2018 CKQ55_RS14200 845b1a0aee678c5f838ffd8cdc6a753a 267 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 247 6.4E-60 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CKQ55_RS00710 3674342beee87d535fa6c4a98ef1aac0 211 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 209 33.641 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CKQ55_RS00710 3674342beee87d535fa6c4a98ef1aac0 211 Gene3D G3DSA:3.40.50.10070 85 211 9.5E-12 T 29-03-2018 CKQ55_RS00710 3674342beee87d535fa6c4a98ef1aac0 211 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 210 8.1E-55 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CKQ55_RS00710 3674342beee87d535fa6c4a98ef1aac0 211 Pfam PF13036 Peptidoglycan-synthase activator LpoB 72 207 7.2E-35 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 Gene3D G3DSA:3.30.1330.10 1 162 2.4E-37 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 Gene3D G3DSA:3.90.650.10 164 347 8.1E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.0E-18 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 341 1.8E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 PIRSF PIRSF036407 1 346 2.3E-114 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 44.869 T 29-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 SUPERFAMILY SSF55326 7 161 1.47E-40 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 SUPERFAMILY SSF56042 164 339 9.57E-49 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS29790 87d3a262b82bdba3481c20f80c35fbd0 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 3.5E-133 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CKQ55_RS19080 1286fe400e7c551a15e1aa5bf8bb6217 114 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.765 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CKQ55_RS19080 1286fe400e7c551a15e1aa5bf8bb6217 114 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 29-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CKQ55_RS19080 1286fe400e7c551a15e1aa5bf8bb6217 114 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 1.8E-29 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CKQ55_RS19080 1286fe400e7c551a15e1aa5bf8bb6217 114 PIRSF PIRSF004761 1 114 2.0E-34 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CKQ55_RS19080 1286fe400e7c551a15e1aa5bf8bb6217 114 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 114 1.4E-39 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CKQ55_RS02115 bc101177693875a297825a83319da712 427 Gene3D G3DSA:3.65.10.10 228 425 3.4E-68 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CKQ55_RS02115 bc101177693875a297825a83319da712 427 PIRSF PIRSF000505 1 426 2.0E-156 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CKQ55_RS02115 bc101177693875a297825a83319da712 427 SUPERFAMILY SSF55205 1 423 4.58E-146 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CKQ55_RS02115 bc101177693875a297825a83319da712 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CKQ55_RS02115 bc101177693875a297825a83319da712 427 Gene3D G3DSA:3.65.10.10 21 227 2.3E-64 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CKQ55_RS02115 bc101177693875a297825a83319da712 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 6.7E-143 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CKQ55_RS02115 bc101177693875a297825a83319da712 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.734 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CKQ55_RS02115 bc101177693875a297825a83319da712 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CKQ55_RS02115 bc101177693875a297825a83319da712 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.9E-156 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Gene3D G3DSA:2.30.38.10 436 516 1.1E-11 T 29-03-2018 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-19 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 SUPERFAMILY SSF56801 10 643 5.1E-192 T 29-03-2018 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Gene3D G3DSA:3.30.300.30 518 650 4.4E-28 T 29-03-2018 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Pfam PF00501 AMP-binding enzyme 83 522 5.2E-94 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.0E-26 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Gene3D G3DSA:3.40.50.980 74 266 7.0E-55 T 29-03-2018 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Gene3D G3DSA:3.40.50.980 267 433 1.3E-38 T 29-03-2018 CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS10940 b91e527db0bdb4449cf46ba71f8cbe3b 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.06 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CKQ55_RS26655 4a302b6705599bdd8f739632c60332fc 263 Gene3D G3DSA:3.40.50.300 1 251 1.2E-74 T 29-03-2018 CKQ55_RS26655 4a302b6705599bdd8f739632c60332fc 263 Pfam PF00005 ABC transporter 19 167 9.7E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26655 4a302b6705599bdd8f739632c60332fc 263 SUPERFAMILY SSF52540 1 236 1.33E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26655 4a302b6705599bdd8f739632c60332fc 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS26655 4a302b6705599bdd8f739632c60332fc 263 SMART SM00382 28 224 2.9E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24150 e99495be4f9a8469ac008bcd70957215 452 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 446 1.9E-114 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS24150 e99495be4f9a8469ac008bcd70957215 452 Pfam PF13347 MFS/sugar transport protein 14 434 2.4E-102 T 29-03-2018 CKQ55_RS24150 e99495be4f9a8469ac008bcd70957215 452 Gene3D G3DSA:1.20.1250.20 219 424 3.6E-14 T 29-03-2018 CKQ55_RS24150 e99495be4f9a8469ac008bcd70957215 452 SUPERFAMILY SSF103473 13 416 3.66E-32 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS24150 e99495be4f9a8469ac008bcd70957215 452 Gene3D G3DSA:1.20.1250.20 13 218 1.4E-15 T 29-03-2018 CKQ55_RS16555 e22ec13afcfc4984e0894ebc0fb757e3 110 Gene3D G3DSA:2.40.50.140 7 110 1.9E-31 T 29-03-2018 CKQ55_RS16555 e22ec13afcfc4984e0894ebc0fb757e3 110 Pfam PF01588 Putative tRNA binding domain 14 107 2.1E-29 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CKQ55_RS16555 e22ec13afcfc4984e0894ebc0fb757e3 110 SUPERFAMILY SSF50249 8 109 3.92E-30 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS08340 2287bc933571840fb81ccf526bce4e49 451 PIRSF PIRSF005348 16 450 9.0E-157 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CKQ55_RS08340 2287bc933571840fb81ccf526bce4e49 451 Pfam PF03390 2-hydroxycarboxylate transporter family 36 442 1.5E-141 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CKQ55_RS05930 445c6ccef99bf7d3ef06b14b5b7bb40b 175 Pfam PF07445 Primosomal replication protein priC 9 173 2.6E-46 T 29-03-2018 IPR010890 Primosomal replication PriB/PriC CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 1.4E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 Gene3D G3DSA:3.40.50.2300 1 124 3.1E-35 T 29-03-2018 CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 SUPERFAMILY SSF52172 1 133 6.12E-37 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 Gene3D G3DSA:1.10.10.10 125 223 2.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 SUPERFAMILY SSF46894 139 218 1.28E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 SMART SM00862 144 217 6.9E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS21275 c09359cf06a1aa6c7461bb78064ba24a 224 SMART SM00448 1 112 6.7E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 Gene3D G3DSA:3.30.420.40 1 246 4.2E-57 T 29-03-2018 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 61.304 T 29-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 Gene3D G3DSA:3.30.420.40 247 468 5.8E-37 T 29-03-2018 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 PIRSF PIRSF000538 3 470 1.0E-78 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 2.2E-82 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 1.3E-21 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 4 463 7.3E-230 T 29-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 SUPERFAMILY SSF53067 255 467 5.71E-40 T 29-03-2018 CKQ55_RS18460 aef22cc405a25dac5c4e3df2d200d62c 472 SUPERFAMILY SSF53067 5 252 2.92E-59 T 29-03-2018 CKQ55_RS31730 a998cf4fc1df6e97e120532607897ab2 333 Pfam PF00665 Integrase core domain 180 285 2.6E-15 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CKQ55_RS31730 a998cf4fc1df6e97e120532607897ab2 333 Gene3D G3DSA:1.10.10.60 85 154 0.02 T 29-03-2018 CKQ55_RS31730 a998cf4fc1df6e97e120532607897ab2 333 Gene3D G3DSA:3.30.420.10 180 326 5.8E-24 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31730 a998cf4fc1df6e97e120532607897ab2 333 SUPERFAMILY SSF53098 180 321 2.66E-26 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31730 a998cf4fc1df6e97e120532607897ab2 333 Pfam PF13936 Helix-turn-helix domain 7 51 2.3E-12 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain CKQ55_RS31730 a998cf4fc1df6e97e120532607897ab2 333 Gene3D G3DSA:1.10.10.60 8 53 2.0E-8 T 29-03-2018 CKQ55_RS08590 35d2e0b26ce3c74b536376c42776364d 147 SUPERFAMILY SSF46894 15 97 2.3E-6 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS08590 35d2e0b26ce3c74b536376c42776364d 147 Gene3D G3DSA:1.10.10.10 2 106 2.7E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08590 35d2e0b26ce3c74b536376c42776364d 147 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 99 1.2E-4 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 536 560 2.1E-12 T 29-03-2018 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 503 515 2.1E-12 T 29-03-2018 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 243 259 2.1E-12 T 29-03-2018 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 309 323 2.1E-12 T 29-03-2018 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 506 512 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 Gene3D G3DSA:3.40.50.150 240 650 6.9E-39 T 29-03-2018 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 Pfam PF02384 N-6 DNA Methylase 499 636 1.1E-8 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 SUPERFAMILY SSF53335 76 105 5.55E-73 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 SUPERFAMILY SSF53335 132 262 5.55E-73 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 SUPERFAMILY SSF53335 305 386 5.55E-73 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 SUPERFAMILY SSF53335 496 665 5.55E-73 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS09800 d99ac3882b248e545dccb8e28981d83c 1204 Gene3D G3DSA:3.90.220.10 663 830 3.1E-16 T 29-03-2018 CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 4.5E-35 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 Gene3D G3DSA:3.90.180.10 222 339 3.4E-7 T 29-03-2018 CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 Gene3D G3DSA:3.90.180.10 1 221 3.1E-63 T 29-03-2018 CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 SUPERFAMILY SSF51735 139 304 3.76E-21 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 Pfam PF00107 Zinc-binding dehydrogenase 171 297 1.1E-17 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS26220 e867e69fbc4abd8a6a1b314b94497e21 339 SUPERFAMILY SSF50129 1 170 2.43E-53 T 29-03-2018 IPR011032 GroES-like CKQ55_RS29445 83f929f538e682882b128e169840a158 324 Gene3D G3DSA:3.40.190.10 181 258 4.7E-23 T 29-03-2018 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 SUPERFAMILY SSF53850 91 322 1.6E-44 T 29-03-2018 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 Pfam PF03466 LysR substrate binding domain 92 292 2.5E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS29445 83f929f538e682882b128e169840a158 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29445 83f929f538e682882b128e169840a158 324 Gene3D G3DSA:1.10.10.10 1 85 4.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29445 83f929f538e682882b128e169840a158 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 Gene3D G3DSA:3.40.190.10 91 180 1.6E-20 T 29-03-2018 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 Gene3D G3DSA:3.40.190.10 259 324 0.026 T 29-03-2018 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29445 83f929f538e682882b128e169840a158 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Gene3D G3DSA:3.40.50.300 2 74 5.7E-11 T 29-03-2018 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Gene3D G3DSA:2.40.30.10 206 299 9.6E-33 T 29-03-2018 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 SUPERFAMILY SSF52540 6 219 1.73E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 8.3E-34 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Gene3D G3DSA:3.40.50.300 75 203 1.0E-30 T 29-03-2018 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.981 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.2E-17 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 7.1E-239 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.9E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-33 T 29-03-2018 CKQ55_RS15280 e618d9b03b6f02bc25507e8f13e7d8f4 394 SUPERFAMILY SSF50447 205 301 2.16E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 SUPERFAMILY SSF56059 98 288 5.48E-49 T 29-03-2018 CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 5.2E-79 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 Gene3D G3DSA:3.40.50.20 1 114 1.3E-33 T 29-03-2018 CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.337 T 29-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.5E-92 T 29-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 Gene3D G3DSA:3.30.470.20 171 277 6.4E-35 T 29-03-2018 CKQ55_RS02420 f3e95e856c8760124a9ff75cba2add92 300 Gene3D G3DSA:3.30.1490.20 115 170 1.3E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS04875 0ea144aa53ef6a275c81f84477665f90 282 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 13 281 5.5E-103 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS04875 0ea144aa53ef6a275c81f84477665f90 282 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 12 281 2.4E-132 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 SUPERFAMILY SSF46894 172 248 2.38E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 Pfam PF00196 Bacterial regulatory proteins, luxR family 187 242 2.1E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 202 4.9E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 218 4.9E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 230 4.9E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 Gene3D G3DSA:1.10.10.10 184 250 1.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 Pfam PF03472 Autoinducer binding domain 17 170 1.1E-25 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 SUPERFAMILY SSF75516 11 176 1.44E-26 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 Gene3D G3DSA:3.30.450.80 9 181 2.4E-31 T 29-03-2018 CKQ55_RS22485 ff3369d45c56cc8941349d8eb493fedb 250 SMART SM00421 185 242 1.7E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 Pfam PF03466 LysR substrate binding domain 94 297 1.1E-27 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 Gene3D G3DSA:3.40.190.10 180 269 1.8E-15 T 29-03-2018 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 SUPERFAMILY SSF46785 8 117 3.34E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 Gene3D G3DSA:3.40.190.10 93 179 2.8E-12 T 29-03-2018 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 SUPERFAMILY SSF53850 95 301 6.33E-32 T 29-03-2018 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 3.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS09755 7c6b88ffaba78634d1d2ef6ca2253026 317 Gene3D G3DSA:1.10.10.10 3 92 4.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05545 f70a191e2dea139aaa40a4ccf6d4e4c8 223 SUPERFAMILY SSF56300 13 219 1.03E-50 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS05545 f70a191e2dea139aaa40a4ccf6d4e4c8 223 Gene3D G3DSA:3.60.21.10 1 222 2.5E-42 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS05545 f70a191e2dea139aaa40a4ccf6d4e4c8 223 Pfam PF00149 Calcineurin-like phosphoesterase 14 189 1.9E-17 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS05545 f70a191e2dea139aaa40a4ccf6d4e4c8 223 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 72 77 - T 29-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 SUPERFAMILY SSF53218 2 204 2.09E-36 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 3.1E-158 T 29-03-2018 IPR008135 Competence-induced protein CinA CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 SUPERFAMILY SSF142433 248 378 3.53E-7 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 119.445 T 29-03-2018 IPR008135 Competence-induced protein CinA CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 Gene3D G3DSA:3.40.980.10 1 172 4.3E-40 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 4.0E-30 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 Gene3D G3DSA:3.90.950.20 243 298 0.001 T 29-03-2018 CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 167 1.6E-34 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 SMART SM00852 5 172 9.1E-36 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS21305 e43638cf0ce7a6329c20bbc02b5409bc 398 PIRSF PIRSF006728 1 384 6.2E-112 T 29-03-2018 IPR008135 Competence-induced protein CinA CKQ55_RS23995 643e563c4cc1c0efbce8a97e5393c574 670 SUPERFAMILY SSF48230 82 325 2.29E-30 T 29-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CKQ55_RS23995 643e563c4cc1c0efbce8a97e5393c574 670 Gene3D G3DSA:1.50.10.100 64 353 1.7E-43 T 29-03-2018 CKQ55_RS23995 643e563c4cc1c0efbce8a97e5393c574 670 Pfam PF05426 Alginate lyase 97 270 3.6E-5 T 29-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 CKQ55_RS23995 643e563c4cc1c0efbce8a97e5393c574 670 Pfam PF07940 Heparinase II/III-like protein 366 592 4.0E-20 T 29-03-2018 IPR012480 Heparinase II/III-like GO:0016829 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 56.813 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 Gene3D G3DSA:3.40.605.10 1 257 1.2E-73 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 Gene3D G3DSA:3.40.309.10 258 443 1.4E-43 T 29-03-2018 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 Pfam PF00171 Aldehyde dehydrogenase family 16 459 1.3E-115 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 SUPERFAMILY SSF53720 2 455 2.23E-119 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS29710 2df8b4c970b94231d79526d31328156e 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 2.0E-244 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 Gene3D G3DSA:3.40.50.300 1 230 7.3E-28 T 29-03-2018 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.2E-128 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.3E-137 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 SUPERFAMILY SSF75138 229 353 1.57E-25 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 SUPERFAMILY SSF53659 392 709 6.99E-94 T 29-03-2018 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 Pfam PF07085 DRTGG domain 233 344 2.6E-29 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 Pfam PF13500 AAA domain 3 229 9.8E-49 T 29-03-2018 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 Gene3D G3DSA:3.40.1390.20 231 366 1.0E-27 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 PIRSF PIRSF006107 1 714 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 SUPERFAMILY SSF52540 3 240 4.99E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21065 a4f61d0ebd93d78c0890934679dd4502 714 Gene3D G3DSA:3.40.718.10 408 692 1.2E-63 T 29-03-2018 CKQ55_RS08450 db2d63991a867fa16357475c48359938 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.256 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS08450 db2d63991a867fa16357475c48359938 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 7 86 1.3E-28 T 29-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CKQ55_RS08450 db2d63991a867fa16357475c48359938 97 PIRSF PIRSF002736 1 97 1.1E-39 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS08450 db2d63991a867fa16357475c48359938 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.8E-43 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS08450 db2d63991a867fa16357475c48359938 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 73 7.0E-27 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Gene3D G3DSA:1.10.1420.10 266 407 6.6E-36 T 29-03-2018 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 SUPERFAMILY SSF52540 567 798 2.73E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Gene3D G3DSA:3.40.1170.10 2 134 1.4E-47 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.348 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 SUPERFAMILY SSF48334 270 566 6.8E-90 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 SUPERFAMILY SSF53150 117 269 7.72E-43 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Pfam PF05190 MutS family domain IV 428 517 2.1E-28 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Pfam PF05192 MutS domain III 272 559 8.6E-39 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Pfam PF01624 MutS domain I 11 122 9.6E-43 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Pfam PF05188 MutS domain II 131 256 4.7E-34 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Gene3D G3DSA:3.30.420.110 135 265 1.5E-27 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 SMART SM00534 607 794 2.3E-122 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 PIRSF PIRSF037677 210 832 4.0E-125 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 PIRSF PIRSF037677 4 192 4.0E-28 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Pfam PF00488 MutS domain V 610 797 6.6E-88 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 SMART SM00533 286 591 6.6E-105 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Gene3D G3DSA:3.40.50.300 567 825 6.9E-43 T 29-03-2018 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 SUPERFAMILY SSF55271 6 116 7.72E-43 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CKQ55_RS18795 9d34ade1ce65e2967ffda5d0cc9c23c1 853 Gene3D G3DSA:1.10.1420.10 408 535 1.2E-31 T 29-03-2018 CKQ55_RS04200 128486d85708f4310a1feba4b34fb2c6 189 SUPERFAMILY SSF56925 34 189 2.35E-79 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS04200 128486d85708f4310a1feba4b34fb2c6 189 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 36 177 3.0E-72 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CKQ55_RS04200 128486d85708f4310a1feba4b34fb2c6 189 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 40 186 2.5E-66 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CKQ55_RS04200 128486d85708f4310a1feba4b34fb2c6 189 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 1 189 42.752 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CKQ55_RS04200 128486d85708f4310a1feba4b34fb2c6 189 Gene3D G3DSA:2.40.160.20 32 189 2.1E-65 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF52151 550 677 4.45E-59 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF52151 738 834 4.45E-59 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 1.3E-76 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF00550 Phosphopantetheine attachment site 2827 2889 9.1E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF00550 Phosphopantetheine attachment site 1818 1884 2.6E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF53901 427 447 5.29E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF53901 23 143 5.29E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF53901 172 397 5.29E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF52777 2094 2338 1.45E-42 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.50.150 2520 2759 5.2E-22 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.50.150 1052 1316 8.8E-27 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.30.559.10 1901 2098 2.7E-22 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.366.10 733 854 1.7E-22 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.366.10 550 681 3.4E-33 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.4E-39 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.30.70.250 682 732 4.9E-13 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF00698 Acyl transferase domain 551 840 2.4E-53 T 29-03-2018 IPR014043 Acyl transferase CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF47336 1813 1923 5.5E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.50.1820 2897 3140 3.4E-14 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF53335 1059 1250 1.99E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF00668 Condensation domain 1943 2260 1.6E-32 T 29-03-2018 IPR001242 Condensation domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF53474 2892 3133 4.93E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SMART SM00825 Beta-ketoacyl synthase 29 452 2.9E-184 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1843 1858 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF52777 1907 2104 5.56E-23 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:1.10.1200.10 2822 2896 3.7E-16 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF08242 Methyltransferase domain 1093 1194 5.3E-21 T 29-03-2018 IPR013217 Methyltransferase type 12 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF08242 Methyltransferase domain 2588 2688 1.6E-17 T 29-03-2018 IPR013217 Methyltransferase type 12 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF55048 675 736 2.49E-6 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF53335 2566 2748 5.27E-24 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF47336 2823 2889 3.93E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.47.10 19 288 2.9E-67 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF51735 1551 1732 1.15E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF00975 Thioesterase domain 2910 3001 4.5E-19 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 1.8E-73 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:1.10.1200.10 1809 1900 6.1E-11 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2848 2863 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 7.9E-14 T 29-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.47.10 292 454 5.2E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Pfam PF08659 KR domain 1555 1724 8.0E-37 T 29-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SUPERFAMILY SSF51735 1341 1535 2.2E-10 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SMART SM00823 Phosphopantetheine attachment site 1816 1888 2.4E-4 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SMART SM00823 Phosphopantetheine attachment site 2825 2893 0.0082 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1553 1726 1.1E-26 T 29-03-2018 CKQ55_RS27115 320cdc5dde709c1c22d2d99c3aa04c8a 3157 Gene3D G3DSA:3.40.50.720 1549 1796 8.1E-30 T 29-03-2018 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 65.12 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 PIRSF PIRSF000149 1 337 1.8E-130 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 1.5E-53 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 SMART SM00846 3 155 4.3E-77 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 4.9E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 4.9E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 4.9E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 4.9E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 4.9E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 Gene3D G3DSA:3.40.50.720 1 164 6.1E-64 T 29-03-2018 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 SUPERFAMILY SSF55347 155 317 2.98E-57 T 29-03-2018 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 6.1E-33 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 Gene3D G3DSA:3.30.360.10 165 318 5.2E-52 T 29-03-2018 CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 SUPERFAMILY SSF51735 1 179 4.77E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17245 6e3c0793f98aa8979bf333dfe6ebfec1 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 2.2E-191 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Pfam PF02954 Bacterial regulatory protein, Fis family 548 587 2.0E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 SUPERFAMILY SSF46689 546 589 7.17E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Pfam PF00158 Sigma-54 interaction domain 273 439 3.9E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 SMART SM00091 160 225 5.6E-5 T 29-03-2018 IPR000014 PAS domain CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 SMART SM00382 292 436 2.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Gene3D G3DSA:3.40.50.300 268 445 5.6E-27 T 29-03-2018 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 SUPERFAMILY SSF55785 161 207 1.61E-6 T 29-03-2018 IPR000014 PAS domain CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Gene3D G3DSA:1.10.8.60 446 552 1.2E-20 T 29-03-2018 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 SUPERFAMILY SSF52540 272 515 2.15E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Gene3D G3DSA:3.30.450.20 116 245 6.3E-7 T 29-03-2018 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Gene3D G3DSA:1.10.10.60 553 589 5.7E-15 T 29-03-2018 CKQ55_RS24360 cf6d84652725c911ab747070d7c604e8 594 Pfam PF13188 PAS domain 164 206 2.1E-4 T 29-03-2018 IPR000014 PAS domain CKQ55_RS29660 347a56e5851237ff181cea4991a03e9a 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 8.0E-34 T 29-03-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CKQ55_RS29660 347a56e5851237ff181cea4991a03e9a 106 Gene3D G3DSA:3.40.50.2300 5 106 5.2E-29 T 29-03-2018 CKQ55_RS29660 347a56e5851237ff181cea4991a03e9a 106 SUPERFAMILY SSF52794 4 102 2.14E-32 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS29660 347a56e5851237ff181cea4991a03e9a 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 1.8E-15 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 SUPERFAMILY SSF53850 87 297 2.05E-33 T 29-03-2018 CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 SUPERFAMILY SSF46785 6 116 9.52E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 Gene3D G3DSA:3.40.190.10 93 179 3.7E-14 T 29-03-2018 CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 Gene3D G3DSA:1.10.10.10 3 92 4.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 Pfam PF03466 LysR substrate binding domain 94 296 7.9E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.7E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS19485 832ea5a336c505ae10a817beb7852bf3 306 Gene3D G3DSA:3.40.190.10 180 269 1.2E-13 T 29-03-2018 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 Pfam PF01544 CorA-like Mg2+ transporter protein 25 312 6.2E-56 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 SUPERFAMILY SSF144083 251 314 1.28E-20 T 29-03-2018 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 Gene3D G3DSA:1.20.58.340 249 316 1.0E-20 T 29-03-2018 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 Gene3D G3DSA:3.30.460.20 1 125 2.6E-10 T 29-03-2018 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 Gene3D G3DSA:1.20.58.340 131 248 1.9E-8 T 29-03-2018 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 SUPERFAMILY SSF143865 1 255 2.48E-37 T 29-03-2018 CKQ55_RS11835 205c7dfc271a5761bcb2ee5c3c0763ed 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 7.8E-111 T 29-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CKQ55_RS26610 5ff395ba500781b29ffc5de456c1123e 148 SUPERFAMILY SSF54593 20 134 1.73E-12 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS26610 5ff395ba500781b29ffc5de456c1123e 148 Gene3D G3DSA:3.10.180.10 19 139 8.4E-10 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS24905 3b635a5d3472e2fc5aa2dc667b70dbe5 845 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 309 319 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS24905 3b635a5d3472e2fc5aa2dc667b70dbe5 845 Pfam PF13954 PapC N-terminal domain 34 179 3.0E-41 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS24905 3b635a5d3472e2fc5aa2dc667b70dbe5 845 Pfam PF13953 PapC C-terminal domain 762 827 1.2E-22 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS24905 3b635a5d3472e2fc5aa2dc667b70dbe5 845 Pfam PF00577 Outer membrane usher protein 197 752 6.3E-195 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS24905 3b635a5d3472e2fc5aa2dc667b70dbe5 845 SUPERFAMILY SSF141729 57 171 1.16E-32 T 29-03-2018 CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 SUPERFAMILY SSF51206 23 162 2.36E-31 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 SUPERFAMILY SSF46785 165 244 5.58E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 SMART SM00100 30 151 4.9E-22 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 SMART SM00419 187 235 2.8E-13 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 Gene3D G3DSA:2.60.120.10 24 165 2.4E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.4E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 Gene3D G3DSA:1.10.10.10 166 250 6.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 5.5E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CKQ55_RS25930 c50de63b9afd7355af2c909f00d31548 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CKQ55_RS06015 3ddf23f6e71c69b4320eec0147ec5068 104 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 22 86 1.0E-15 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS06015 3ddf23f6e71c69b4320eec0147ec5068 104 SUPERFAMILY SSF55604 27 98 1.44E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS06015 3ddf23f6e71c69b4320eec0147ec5068 104 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 40 57 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS06015 3ddf23f6e71c69b4320eec0147ec5068 104 Gene3D G3DSA:3.30.1360.60 25 100 7.9E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS06015 3ddf23f6e71c69b4320eec0147ec5068 104 Pfam PF00367 phosphotransferase system, EIIB 30 62 1.2E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 Pfam PF00083 Sugar (and other) transporter 19 460 5.7E-105 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 PRINTS PR00171 Sugar transporter signature 109 128 9.1E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 PRINTS PR00171 Sugar transporter signature 385 397 9.1E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 PRINTS PR00171 Sugar transporter signature 26 36 9.1E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 PRINTS PR00171 Sugar transporter signature 273 283 9.1E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 PRINTS PR00171 Sugar transporter signature 362 383 9.1E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 SUPERFAMILY SSF103473 12 460 4.97E-74 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 Gene3D G3DSA:1.20.1250.20 236 473 1.0E-31 T 29-03-2018 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 Gene3D G3DSA:1.20.1250.20 6 213 8.2E-38 T 29-03-2018 CKQ55_RS24270 aabf3f3d2ae359f4626c83353f2cecad 479 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 456 1.8E-100 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22350 2d7ce531afe91c7c2bcfc452d3a7fba3 302 PIRSF PIRSF020481 1 302 7.1E-124 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted CKQ55_RS22350 2d7ce531afe91c7c2bcfc452d3a7fba3 302 Pfam PF04865 Baseplate J-like protein 118 261 1.2E-26 T 29-03-2018 IPR006949 Baseplate protein J-like CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 SUPERFAMILY SSF56601 208 641 1.43E-89 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 Gene3D G3DSA:1.10.3810.10 42 243 3.7E-58 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 774 3.0E-253 T 29-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 303 422 7.4E-8 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 689 771 2.2E-13 T 29-03-2018 IPR009647 Penicillin-binding, C-terminal CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 Pfam PF00912 Transglycosylase 60 226 4.8E-50 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 Gene3D G3DSA:3.40.710.10 253 607 2.0E-63 T 29-03-2018 CKQ55_RS20185 4e034aca67e32535e7d6fa3136b6f37e 774 SUPERFAMILY SSF53955 40 259 1.35E-64 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS07370 b9b11771376351964e8e3eaed3ed72cb 240 Pfam PF08241 Methyltransferase domain 72 125 5.6E-10 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CKQ55_RS07370 b9b11771376351964e8e3eaed3ed72cb 240 SUPERFAMILY SSF53335 54 207 7.74E-17 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS07370 b9b11771376351964e8e3eaed3ed72cb 240 Gene3D G3DSA:3.40.50.150 16 210 1.0E-14 T 29-03-2018 CKQ55_RS19570 afee671f8329e25bd9f31eb593d2c62d 267 Gene3D G3DSA:3.40.190.10 18 160 6.9E-23 T 29-03-2018 CKQ55_RS19570 afee671f8329e25bd9f31eb593d2c62d 267 SUPERFAMILY SSF53850 14 264 4.42E-45 T 29-03-2018 CKQ55_RS19570 afee671f8329e25bd9f31eb593d2c62d 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 261 2.8E-45 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS19570 afee671f8329e25bd9f31eb593d2c62d 267 Gene3D G3DSA:3.40.190.10 161 265 1.5E-9 T 29-03-2018 CKQ55_RS19570 afee671f8329e25bd9f31eb593d2c62d 267 SMART SM00062 36 265 1.3E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 Pfam PF07883 Cupin domain 112 170 1.3E-7 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 Gene3D G3DSA:1.10.260.40 3 68 8.5E-17 T 29-03-2018 CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 SMART SM00530 11 66 1.3E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 Gene3D G3DSA:2.60.120.10 69 182 6.2E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 SUPERFAMILY SSF51182 59 178 3.04E-20 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 SUPERFAMILY SSF47413 5 70 1.6E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS12560 f26c93d8b8ecc3d4fadf6c404398a17b 182 Pfam PF01381 Helix-turn-helix 16 64 4.1E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 Hamap MF_01201 Alanine racemase. 1 358 34.793 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 3.1E-39 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.3E-143 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 Gene3D G3DSA:3.20.20.10 1 216 2.9E-45 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 Gene3D G3DSA:2.40.37.10 217 359 5.5E-52 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 SUPERFAMILY SSF51419 8 235 1.1E-68 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 SMART SM01005 234 358 7.9E-61 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.3E-69 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 267 282 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 288 305 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 26 42 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 155 166 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 340 353 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 120 132 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 192 219 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 60 78 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 PRINTS PR00992 Alanine racemase signature 250 265 1.1E-75 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11110 28e8475dab49cb0994775a205d1af92e 359 SUPERFAMILY SSF50621 228 358 7.67E-44 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS20410 6780b7986e6852ad5baf6eef13be6ce9 232 Gene3D G3DSA:3.40.50.1820 5 215 4.1E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS20410 6780b7986e6852ad5baf6eef13be6ce9 232 SUPERFAMILY SSF53474 5 205 7.42E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS20410 6780b7986e6852ad5baf6eef13be6ce9 232 Pfam PF02230 Phospholipase/Carboxylesterase 4 207 9.9E-50 T 29-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CKQ55_RS00975 99bf365d616e6ec01c3715e9c3bf91ec 312 Gene3D G3DSA:3.40.50.720 124 278 3.4E-32 T 29-03-2018 CKQ55_RS00975 99bf365d616e6ec01c3715e9c3bf91ec 312 Gene3D G3DSA:3.40.50.720 1 123 4.6E-11 T 29-03-2018 CKQ55_RS00975 99bf365d616e6ec01c3715e9c3bf91ec 312 SUPERFAMILY SSF51735 98 278 4.03E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS00975 99bf365d616e6ec01c3715e9c3bf91ec 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 63.847 T 29-03-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CKQ55_RS00975 99bf365d616e6ec01c3715e9c3bf91ec 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 2.2E-42 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS00975 99bf365d616e6ec01c3715e9c3bf91ec 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 SUPERFAMILY SSF47413 3 49 7.5E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 SMART SM00354 1 74 3.3E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 SUPERFAMILY SSF53822 76 314 5.8E-44 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 Gene3D G3DSA:1.10.10.60 2 15 0.25 T 29-03-2018 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 Pfam PF13377 Periplasmic binding protein-like domain 167 326 6.8E-33 T 29-03-2018 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 Gene3D G3DSA:3.40.50.2300 52 173 6.1E-13 T 29-03-2018 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 Gene3D G3DSA:1.10.260.40 16 51 1.8E-15 T 29-03-2018 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 Gene3D G3DSA:3.40.50.2300 174 309 2.6E-33 T 29-03-2018 CKQ55_RS16550 0884ef743e6e2c1be03120fcb7cf4230 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS01500 67821d937d280f4f81254002137b7e0f 477 PIRSF PIRSF002457 1 473 3.5E-130 T 29-03-2018 IPR030676 Citrate carrier CitT-related CKQ55_RS01500 67821d937d280f4f81254002137b7e0f 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 472 9.3E-145 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS01500 67821d937d280f4f81254002137b7e0f 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 468 6.0E-139 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 47.727 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 Gene3D G3DSA:3.40.640.10 57 270 4.6E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 Gene3D G3DSA:3.90.1150.10 271 385 1.2E-31 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 SUPERFAMILY SSF53383 4 381 9.14E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 Pfam PF00155 Aminotransferase class I and II 40 380 3.7E-59 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS03345 b8f5bfe49ef8dda6a58fc1594a4af573 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 381 1.4E-138 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 Pfam PF04055 Radical SAM superfamily 118 263 1.2E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 Pfam PF13353 4Fe-4S single cluster domain 112 175 3.9E-6 T 29-03-2018 CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 PIRSF PIRSF004911 1 342 8.4E-123 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 9.9E-158 T 29-03-2018 IPR022462 Lysine-2,3-aminomutase-like CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 Gene3D G3DSA:3.20.20.70 101 329 4.4E-19 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 SUPERFAMILY SSF102114 102 325 2.49E-25 T 29-03-2018 CKQ55_RS10655 8fa6339fbd4385829710bd37d2c1fbc3 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 8.1E-146 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 236 341 3.4E-27 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 SUPERFAMILY SSF53901 2 230 5.19E-38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 Gene3D G3DSA:3.40.47.10 240 389 8.4E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 SUPERFAMILY SSF53901 203 387 9.23E-48 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 Gene3D G3DSA:3.40.47.10 1 234 4.2E-37 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 SMART SM00825 Beta-ketoacyl synthase 2 388 1.3E-9 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CKQ55_RS14625 39f74cae9590b9ce947fb252d49d67a2 389 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 91 229 3.7E-21 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS18280 22e763a554883ab48223835446d07a2f 174 PIRSF PIRSF012290 38 174 6.1E-63 T 29-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 CKQ55_RS18280 22e763a554883ab48223835446d07a2f 174 Pfam PF00936 BMC domain 80 148 2.3E-12 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18280 22e763a554883ab48223835446d07a2f 174 SMART SM00877 79 161 4.6E-11 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18280 22e763a554883ab48223835446d07a2f 174 SUPERFAMILY SSF143414 79 156 3.01E-9 T 29-03-2018 CKQ55_RS24265 e23842553ed728c5faa3549773f66fb2 144 Gene3D G3DSA:3.40.930.10 2 144 2.3E-24 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS24265 e23842553ed728c5faa3549773f66fb2 144 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 142 5.6E-21 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS24265 e23842553ed728c5faa3549773f66fb2 144 SUPERFAMILY SSF55804 4 142 4.06E-25 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS11515 282670f8578241c70e27171bfa2af097 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.081 T 29-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CKQ55_RS11515 282670f8578241c70e27171bfa2af097 256 SUPERFAMILY SSF110399 1 235 5.89E-81 T 29-03-2018 CKQ55_RS11515 282670f8578241c70e27171bfa2af097 256 Gene3D G3DSA:3.20.20.70 1 256 2.5E-54 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS11515 282670f8578241c70e27171bfa2af097 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 4.9E-109 T 29-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CKQ55_RS21025 fecb47ba83d6b842abc6f636822e6389 183 Gene3D G3DSA:3.60.21.10 1 182 3.2E-27 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS21025 fecb47ba83d6b842abc6f636822e6389 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 5.6E-24 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CKQ55_RS21025 fecb47ba83d6b842abc6f636822e6389 183 SUPERFAMILY SSF56300 1 168 9.57E-37 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS21025 fecb47ba83d6b842abc6f636822e6389 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 6.7E-43 T 29-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CKQ55_RS21025 fecb47ba83d6b842abc6f636822e6389 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 29-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Pfam PF09084 NMT1/THI5 like 374 569 1.2E-8 T 29-03-2018 IPR015168 SsuA/THI5-like CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Gene3D G3DSA:3.40.190.10 347 452 1.6E-8 T 29-03-2018 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 97 112 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Pfam PF02954 Bacterial regulatory protein, Fis family 292 320 8.8E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 SUPERFAMILY SSF46689 224 327 2.6E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Gene3D G3DSA:1.10.8.60 184 244 2.1E-25 T 29-03-2018 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 SMART SM00062 350 570 2.5E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Gene3D G3DSA:1.10.10.60 245 329 3.1E-9 T 29-03-2018 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 SMART SM00382 31 175 3.3E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 352 631 3.6E-57 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Gene3D G3DSA:3.40.190.10 453 634 3.2E-27 T 29-03-2018 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Pfam PF00158 Sigma-54 interaction domain 18 175 4.8E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 Gene3D G3DSA:3.40.50.300 12 183 1.2E-24 T 29-03-2018 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 SUPERFAMILY SSF52540 15 252 2.25E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 SUPERFAMILY SSF53850 349 582 3.63E-38 T 29-03-2018 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 35 48 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 3.7E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS18485 65cdc71e10b35d7efc09bc932665d43a 647 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 3.7E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.232 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 6.4E-23 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 6.4E-23 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.4E-23 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.2E-34 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 Pfam PF01197 Ribosomal protein L31 1 64 1.8E-30 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 SUPERFAMILY SSF143800 1 66 2.12E-27 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS12275 eccc182fc91e4915e35b5bd81634ec41 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS04705 d96bc3b1330d7c6637fc96953d4da8c4 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 294 1.6E-104 T 29-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CKQ55_RS04705 d96bc3b1330d7c6637fc96953d4da8c4 371 SUPERFAMILY SSF55931 4 369 1.83E-104 T 29-03-2018 CKQ55_RS04705 d96bc3b1330d7c6637fc96953d4da8c4 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 89.075 T 29-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CKQ55_RS04705 d96bc3b1330d7c6637fc96953d4da8c4 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 6.2E-73 T 29-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CKQ55_RS31460 2fd08978f5566aa12636ebea9b02f79a 176 Pfam PF13673 Acetyltransferase (GNAT) domain 92 156 2.1E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS31460 2fd08978f5566aa12636ebea9b02f79a 176 Gene3D G3DSA:3.40.630.30 4 173 1.6E-14 T 29-03-2018 CKQ55_RS31460 2fd08978f5566aa12636ebea9b02f79a 176 SUPERFAMILY SSF55729 17 155 2.3E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS17490 8ae8d9255c9adb048c155d8df12b9025 192 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 186 34.582 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CKQ55_RS17490 8ae8d9255c9adb048c155d8df12b9025 192 Pfam PF02441 Flavoprotein 4 165 7.0E-23 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS17490 8ae8d9255c9adb048c155d8df12b9025 192 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 4 184 2.5E-63 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CKQ55_RS17490 8ae8d9255c9adb048c155d8df12b9025 192 SUPERFAMILY SSF52507 4 186 3.53E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS17490 8ae8d9255c9adb048c155d8df12b9025 192 Gene3D G3DSA:3.40.50.1950 3 190 5.2E-50 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS22960 8d4b09e9abcbbe25024232f9aafa6227 149 Gene3D G3DSA:3.40.930.10 2 143 5.8E-31 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS22960 8d4b09e9abcbbe25024232f9aafa6227 149 SUPERFAMILY SSF55804 4 141 2.22E-34 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS22960 8d4b09e9abcbbe25024232f9aafa6227 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 2.8E-31 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS22960 8d4b09e9abcbbe25024232f9aafa6227 149 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 300 22.792 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 196 1.8E-49 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 Gene3D G3DSA:3.40.50.620 7 220 3.2E-35 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 SUPERFAMILY SSF52402 7 225 6.84E-61 T 29-03-2018 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 Pfam PF11734 TilS substrate C-terminal domain 356 428 1.9E-24 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 Pfam PF09179 TilS substrate binding domain 241 308 1.2E-19 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 SUPERFAMILY SSF56037 319 428 1.02E-28 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 401 9.2E-17 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 SMART SM00977 356 428 4.5E-23 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 SUPERFAMILY SSF82829 227 311 4.45E-26 T 29-03-2018 CKQ55_RS07510 099b8eac6a3b46ac2ac319156aa89845 433 Pfam PF01171 PP-loop family 14 191 5.6E-56 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CKQ55_RS15635 0bb9d73c7402de0d7785b710727ebf5e 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 4 333 54.638 T 29-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CKQ55_RS15635 0bb9d73c7402de0d7785b710727ebf5e 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 266 1.6E-29 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CKQ55_RS15635 0bb9d73c7402de0d7785b710727ebf5e 333 SUPERFAMILY SSF56524 73 329 2.22E-92 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CKQ55_RS15635 0bb9d73c7402de0d7785b710727ebf5e 333 Gene3D G3DSA:3.90.420.10 63 333 5.6E-63 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 SUPERFAMILY SSF46785 19 92 2.12E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 Pfam PF09339 IclR helix-turn-helix domain 20 68 6.9E-14 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 Gene3D G3DSA:1.10.10.10 1 79 8.2E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 Pfam PF01614 Bacterial transcriptional regulator 138 263 4.3E-42 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 SMART SM00346 18 108 2.7E-41 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 Gene3D G3DSA:3.30.450.40 86 271 5.4E-47 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS13975 6a479aada5a07dfaa7b9b9557a8fbbe6 272 SUPERFAMILY SSF55781 85 266 7.85E-47 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS26585 078b8fa231be4f502fb6bc3b8a615cb7 415 Gene3D G3DSA:1.20.1600.10 17 411 7.9E-43 T 29-03-2018 CKQ55_RS26585 078b8fa231be4f502fb6bc3b8a615cb7 415 SUPERFAMILY SSF56954 6 410 6.28E-51 T 29-03-2018 CKQ55_RS26585 078b8fa231be4f502fb6bc3b8a615cb7 415 Pfam PF02321 Outer membrane efflux protein 27 212 7.8E-14 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS26585 078b8fa231be4f502fb6bc3b8a615cb7 415 Pfam PF02321 Outer membrane efflux protein 242 410 1.0E-16 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS01890 48311c136890a58772d8335fe273e25f 207 PIRSF PIRSF028788 1 205 8.2E-50 T 29-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type CKQ55_RS01890 48311c136890a58772d8335fe273e25f 207 Pfam PF04994 TfoX C-terminal domain 117 194 8.2E-24 T 29-03-2018 IPR007077 TfoX, C-terminal CKQ55_RS01890 48311c136890a58772d8335fe273e25f 207 SUPERFAMILY SSF159894 10 106 1.88E-23 T 29-03-2018 CKQ55_RS01890 48311c136890a58772d8335fe273e25f 207 Pfam PF04993 TfoX N-terminal domain 16 106 1.2E-22 T 29-03-2018 IPR007076 TfoX, N-terminal CKQ55_RS01890 48311c136890a58772d8335fe273e25f 207 Gene3D G3DSA:1.10.150.20 117 195 2.2E-17 T 29-03-2018 CKQ55_RS01890 48311c136890a58772d8335fe273e25f 207 Gene3D G3DSA:3.30.1460.30 8 108 4.6E-17 T 29-03-2018 CKQ55_RS27205 971b58bccfeeb509c97899c09999880b 117 Gene3D G3DSA:3.10.450.50 1 114 1.9E-20 T 29-03-2018 CKQ55_RS27205 971b58bccfeeb509c97899c09999880b 117 SUPERFAMILY SSF54427 1 115 1.93E-25 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS27205 971b58bccfeeb509c97899c09999880b 117 Pfam PF12680 SnoaL-like domain 9 96 2.9E-12 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CKQ55_RS24885 6796399faaef229f5c5038cb0b486a8d 209 Gene3D G3DSA:1.10.10.10 131 204 3.3E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24885 6796399faaef229f5c5038cb0b486a8d 209 Pfam PF15977 Winged helix-turn-helix DNA binding 140 206 1.9E-25 T 29-03-2018 CKQ55_RS24885 6796399faaef229f5c5038cb0b486a8d 209 SUPERFAMILY SSF51206 16 128 7.74E-7 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 9.0E-182 T 29-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 59.822 T 29-03-2018 IPR023724 Glucan biosynthesis, MdoD CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 Gene3D G3DSA:2.60.40.10 423 538 1.4E-26 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 SUPERFAMILY SSF81296 422 537 1.02E-27 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 Gene3D G3DSA:2.70.98.10 45 419 7.4E-157 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 PIRSF PIRSF006281 1 538 2.7E-202 T 29-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CKQ55_RS28130 db0357852b32cea95427c268120cba43 551 SUPERFAMILY SSF74650 45 422 8.47E-147 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS16430 c98b9a82301b1b012c165a56d92de1b7 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS16430 c98b9a82301b1b012c165a56d92de1b7 376 Pfam PF05175 Methyltransferase small domain 197 368 1.8E-56 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CKQ55_RS16430 c98b9a82301b1b012c165a56d92de1b7 376 Gene3D G3DSA:3.40.50.150 181 376 3.3E-32 T 29-03-2018 CKQ55_RS16430 c98b9a82301b1b012c165a56d92de1b7 376 PIRSF PIRSF037565 1 372 2.0E-160 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS16430 c98b9a82301b1b012c165a56d92de1b7 376 SUPERFAMILY SSF53335 188 369 3.97E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS16430 c98b9a82301b1b012c165a56d92de1b7 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 371 50.435 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS24325 0789ea0c6d11b623ad821bf4541d55c6 277 Gene3D G3DSA:3.40.50.20 104 249 7.1E-6 T 29-03-2018 CKQ55_RS24325 0789ea0c6d11b623ad821bf4541d55c6 277 Pfam PF13478 XdhC Rossmann domain 106 247 2.1E-30 T 29-03-2018 IPR027051 XdhC Rossmann domain CKQ55_RS24325 0789ea0c6d11b623ad821bf4541d55c6 277 Pfam PF02625 XdhC and CoxI family 12 73 1.8E-18 T 29-03-2018 IPR003777 XdhC- CoxI CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Pfam PF14492 Elongation Factor G, domain II 409 482 1.0E-35 T 29-03-2018 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SUPERFAMILY SSF54980 407 485 3.96E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 108.422 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SUPERFAMILY SSF54980 609 695 3.12E-29 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-64 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Pfam PF03764 Elongation factor G, domain IV 484 603 1.6E-47 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.2E-31 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Gene3D G3DSA:2.40.30.10 296 406 7.2E-33 T 29-03-2018 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Pfam PF00679 Elongation factor G C-terminus 606 691 5.0E-31 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SMART SM00889 485 604 1.8E-72 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Gene3D G3DSA:3.30.230.10 499 619 5.0E-43 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Gene3D G3DSA:3.30.70.870 407 498 1.7E-38 T 29-03-2018 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Gene3D G3DSA:3.40.50.300 5 293 3.2E-52 T 29-03-2018 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SMART SM00838 606 693 4.6E-54 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SUPERFAMILY SSF50447 271 409 2.65E-37 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 697 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 7.7E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SUPERFAMILY SSF52540 6 288 2.61E-104 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 SUPERFAMILY SSF54211 484 605 7.08E-44 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS22890 0d4cac8c09114061e48ed2898f0b4bc0 700 Gene3D G3DSA:3.30.70.240 620 697 9.5E-32 T 29-03-2018 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 Pfam PF13091 PLD-like domain 247 392 2.9E-14 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 Pfam PF13091 PLD-like domain 64 197 1.4E-21 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 Gene3D G3DSA:3.30.870.10 224 408 1.2E-24 T 29-03-2018 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 Gene3D G3DSA:3.30.870.10 38 219 2.8E-29 T 29-03-2018 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 SMART SM00155 337 364 2.3E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 SMART SM00155 142 169 1.1E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 SUPERFAMILY SSF56024 52 201 2.69E-30 T 29-03-2018 CKQ55_RS05835 c586aee318d8507c88999e8ff6c52b2e 416 SUPERFAMILY SSF56024 242 408 3.4E-28 T 29-03-2018 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Pfam PF00158 Sigma-54 interaction domain 212 378 7.0E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 424 433 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Gene3D G3DSA:1.10.10.60 441 515 4.6E-8 T 29-03-2018 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Gene3D G3DSA:3.30.450.40 23 181 1.6E-16 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Pfam PF13185 GAF domain 35 176 1.2E-11 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 SMART SM00065 35 186 1.4E-28 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Gene3D G3DSA:1.10.8.60 399 440 1.7E-21 T 29-03-2018 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 298 313 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 SUPERFAMILY SSF52540 212 452 1.95E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 SUPERFAMILY SSF55781 17 176 7.2E-17 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Gene3D G3DSA:3.40.50.300 207 398 5.0E-39 T 29-03-2018 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 Pfam PF02954 Bacterial regulatory protein, Fis family 481 515 3.9E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 SMART SM00382 232 375 2.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 18 524 9.3E-226 T 29-03-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 500 520 2.7E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 483 500 2.7E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 236 249 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS22795 af7cbedb3aba0176cfccb53ebb6ae2d2 524 SUPERFAMILY SSF46689 424 519 1.03E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 Gene3D G3DSA:1.10.1390.10 513 549 1.2E-21 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.771 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 Gene3D G3DSA:3.40.50.10490 145 258 4.1E-53 T 29-03-2018 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 Gene3D G3DSA:3.40.50.10490 259 512 1.9E-125 T 29-03-2018 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.4E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.4E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.4E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.4E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.4E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.4E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 Gene3D G3DSA:3.40.50.10490 1 144 1.4E-48 T 29-03-2018 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 Pfam PF00342 Phosphoglucose isomerase 52 541 3.0E-255 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS11255 b82d7933fc2add2a00e35ae38c5712a2 549 SUPERFAMILY SSF53697 5 548 3.61E-226 T 29-03-2018 CKQ55_RS21900 6ef1a39b6f4815f62a56c92fd9c264cc 184 Pfam PF13420 Acetyltransferase (GNAT) domain 14 169 2.1E-18 T 29-03-2018 CKQ55_RS21900 6ef1a39b6f4815f62a56c92fd9c264cc 184 Gene3D G3DSA:3.40.630.30 9 181 5.5E-31 T 29-03-2018 CKQ55_RS21900 6ef1a39b6f4815f62a56c92fd9c264cc 184 SUPERFAMILY SSF55729 8 177 1.89E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 644 2.9E-289 T 29-03-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 SUPERFAMILY SSF52518 419 630 1.14E-51 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 601 1.2E-38 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 478 497 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 Gene3D G3DSA:3.40.50.970 2 215 2.6E-47 T 29-03-2018 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 Gene3D G3DSA:3.40.50.1220 216 410 2.4E-39 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 4.5E-31 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 Gene3D G3DSA:3.40.50.970 411 615 2.1E-36 T 29-03-2018 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 SUPERFAMILY SSF52518 3 208 4.87E-33 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 2.9E-34 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS09955 3250ea1cbe61fd2ab263b1c602e956f0 646 SUPERFAMILY SSF52467 185 368 2.12E-42 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 SMART SM00388 203 269 5.9E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 7.8E-27 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Gene3D G3DSA:3.30.565.10 274 428 3.2E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 3.5E-135 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 1.2E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Gene3D G3DSA:3.30.450.20 97 208 5.1E-12 T 29-03-2018 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 SUPERFAMILY SSF47384 190 268 3.92E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 SUPERFAMILY SSF55874 259 422 4.19E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 SMART SM00091 98 164 0.0036 T 29-03-2018 IPR000014 PAS domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 5.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 5.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 5.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 5.4E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 SUPERFAMILY SSF55785 87 195 1.54E-8 T 29-03-2018 IPR000014 PAS domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 5.4E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Gene3D G3DSA:1.10.287.130 209 265 2.5E-19 T 29-03-2018 CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 SMART SM00387 313 425 3.6E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06500 130eeb8ddaae66d8c54d782dfb4f5893 429 Pfam PF00989 PAS fold 99 193 1.9E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 SUPERFAMILY SSF51445 118 531 2.86E-86 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 SUPERFAMILY SSF51011 531 604 1.13E-9 T 29-03-2018 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 PIRSF PIRSF036918 1 603 5.6E-228 T 29-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 Gene3D G3DSA:3.20.20.80 116 514 6.5E-85 T 29-03-2018 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 Gene3D G3DSA:2.60.40.10 7 112 1.6E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 Gene3D G3DSA:2.60.40.1180 554 603 5.2E-4 T 29-03-2018 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 105 3.6E-7 T 29-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 Pfam PF00128 Alpha amylase, catalytic domain 178 494 1.6E-83 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 Gene3D G3DSA:3.20.20.80 515 553 2.3E-8 T 29-03-2018 CKQ55_RS06485 ffb9eac4b965e9981ae435542d4ad850 606 SMART SM00642 128 522 7.9E-83 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS17845 413abebdf4acf16b56416bce9d4f3e13 828 Pfam PF13953 PapC C-terminal domain 761 817 6.8E-9 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS17845 413abebdf4acf16b56416bce9d4f3e13 828 Pfam PF13954 PapC N-terminal domain 37 180 8.4E-32 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS17845 413abebdf4acf16b56416bce9d4f3e13 828 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 311 321 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS17845 413abebdf4acf16b56416bce9d4f3e13 828 SUPERFAMILY SSF141729 60 172 4.32E-21 T 29-03-2018 CKQ55_RS17845 413abebdf4acf16b56416bce9d4f3e13 828 Pfam PF00577 Outer membrane usher protein 198 751 1.3E-190 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Pfam PF13191 AAA ATPase domain 45 194 2.7E-8 T 29-03-2018 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 SUPERFAMILY SSF52540 33 191 2.28E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 SMART SM00421 839 896 2.1E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Gene3D G3DSA:1.25.40.10 607 828 6.5E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Gene3D G3DSA:1.25.40.10 347 606 1.2E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 842 856 6.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 856 872 6.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 884 6.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 SUPERFAMILY SSF46894 831 902 1.9E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 841 894 8.1E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Pfam PF07721 Tetratricopeptide repeat 750 773 0.6 T 29-03-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Pfam PF07721 Tetratricopeptide repeat 554 573 0.15 T 29-03-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Gene3D G3DSA:3.40.50.300 30 213 5.0E-6 T 29-03-2018 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 SUPERFAMILY SSF48452 515 704 1.96E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS17765 ad05c6e391703c78266f9b59b45aa593 903 Gene3D G3DSA:1.10.10.10 831 903 1.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 SUPERFAMILY SSF47413 15 74 8.44E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 SMART SM00354 15 86 9.0E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 Gene3D G3DSA:1.10.260.40 30 70 9.5E-19 T 29-03-2018 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 3.2E-14 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 Gene3D G3DSA:3.40.50.2300 189 319 4.0E-42 T 29-03-2018 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 29-03-2018 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 Gene3D G3DSA:1.10.10.10 5 29 3.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 Gene3D G3DSA:3.40.50.2300 71 188 5.1E-30 T 29-03-2018 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 Pfam PF13377 Periplasmic binding protein-like domain 181 338 6.7E-34 T 29-03-2018 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 SUPERFAMILY SSF53822 76 341 3.81E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.5E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS07075 8e2651b57af43ac81c5c57acdf4df4e9 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 27 37 1.5E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 1.5E-223 T 29-03-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 SUPERFAMILY SSF53720 3 480 4.97E-167 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 Gene3D G3DSA:3.40.605.10 1 259 3.2E-97 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 Gene3D G3DSA:3.40.309.10 260 460 2.7E-73 T 29-03-2018 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09070 b9ad091e42b79e47c48c55e6d90aafca 488 Pfam PF00171 Aldehyde dehydrogenase family 17 474 3.0E-172 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Pfam PF16330 MukB hinge domain 645 810 3.4E-74 T 29-03-2018 IPR032520 MukB, hinge domain CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Gene3D G3DSA:3.40.1140.10 1 227 8.3E-12 T 29-03-2018 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Pfam PF04310 MukB N-terminal 2 227 3.6E-123 T 29-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Gene3D G3DSA:1.20.120.570 505 675 8.9E-4 T 29-03-2018 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 SUPERFAMILY SSF52540 22 224 1.09E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.207 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 SUPERFAMILY SSF52540 1268 1433 4.17E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 SUPERFAMILY SSF52540 21 55 4.17E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Gene3D G3DSA:1.20.120.330 676 969 0.011 T 29-03-2018 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Gene3D G3DSA:1.20.120.330 329 485 0.0027 T 29-03-2018 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 PIRSF PIRSF005246 1 1482 0.0 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 2.7E-14 T 29-03-2018 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Gene3D G3DSA:1.10.287.620 981 1118 1.2E-8 T 29-03-2018 CKQ55_RS02040 194d13af15c61fa5590d849e3c84ead8 1482 Gene3D G3DSA:3.40.50.300 1152 1436 6.1E-6 T 29-03-2018 CKQ55_RS11030 c3e93a5c96ba7b284ad949945ca7fc26 534 Gene3D G3DSA:3.20.20.450 269 526 6.5E-85 T 29-03-2018 IPR001633 EAL domain CKQ55_RS11030 c3e93a5c96ba7b284ad949945ca7fc26 534 SMART SM00052 267 511 3.6E-108 T 29-03-2018 IPR001633 EAL domain CKQ55_RS11030 c3e93a5c96ba7b284ad949945ca7fc26 534 SUPERFAMILY SSF141868 273 518 3.79E-77 T 29-03-2018 IPR001633 EAL domain CKQ55_RS11030 c3e93a5c96ba7b284ad949945ca7fc26 534 Pfam PF12792 CSS motif domain associated with EAL 39 242 8.6E-36 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CKQ55_RS11030 c3e93a5c96ba7b284ad949945ca7fc26 534 Pfam PF00563 EAL domain 273 505 5.9E-67 T 29-03-2018 IPR001633 EAL domain CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 Gene3D G3DSA:1.10.10.10 1 87 1.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 SUPERFAMILY SSF53850 88 296 6.52E-43 T 29-03-2018 CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 Pfam PF03466 LysR substrate binding domain 88 294 4.3E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.0E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 Gene3D G3DSA:3.40.190.10 177 265 4.5E-24 T 29-03-2018 CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 SUPERFAMILY SSF46785 1 111 9.08E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21985 6f5b54c3717fcdcaac1d4515386b81ff 306 Gene3D G3DSA:3.40.190.10 88 176 2.4E-16 T 29-03-2018 CKQ55_RS22180 3081f6a02731d8ce7e2c2ebb121ee9da 301 Gene3D G3DSA:1.10.3720.10 24 290 3.5E-43 T 29-03-2018 CKQ55_RS22180 3081f6a02731d8ce7e2c2ebb121ee9da 301 SUPERFAMILY SSF161098 95 282 3.66E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22180 3081f6a02731d8ce7e2c2ebb121ee9da 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 71 1.6E-7 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS22180 3081f6a02731d8ce7e2c2ebb121ee9da 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 3.4E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 Gene3D G3DSA:2.120.10.30 2 289 7.9E-38 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 5.4E-23 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 5.4E-23 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 5.4E-23 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 5.4E-23 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 5.4E-23 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 254 2.3E-74 T 29-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CKQ55_RS19790 b08a8b04c0372ee6fc9922ce49315d6b 290 SUPERFAMILY SSF63829 4 285 1.8E-63 T 29-03-2018 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Gene3D G3DSA:2.40.30.10 569 697 6.9E-30 T 29-03-2018 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Gene3D G3DSA:3.40.50.10050 698 774 6.9E-25 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 SUPERFAMILY SSF46955 3 50 7.87E-13 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Pfam PF00009 Elongation factor Tu GTP binding domain 400 556 2.8E-35 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 SUPERFAMILY SSF52540 395 563 7.46E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Pfam PF11987 Translation-initiation factor 2 680 785 4.1E-36 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 SUPERFAMILY SSF52156 673 802 2.22E-37 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 312 895 1.5E-297 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 399 554 5.7E-34 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 SUPERFAMILY SSF50447 797 893 4.12E-34 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 5.2E-16 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 320 370 1.1E-14 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.1E-8 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 ProSitePatterns PS01176 Initiation factor 2 signature. 846 868 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 SUPERFAMILY SSF50447 569 650 7.9E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Gene3D G3DSA:2.40.30.10 796 894 3.5E-31 T 29-03-2018 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Gene3D G3DSA:3.30.56.50 322 363 1.6E-9 T 29-03-2018 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Gene3D G3DSA:3.30.56.50 4 45 2.1E-10 T 29-03-2018 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 893 17.638 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS16085 9092726ed77819670e47d394cea37b2b 896 Gene3D G3DSA:3.40.50.300 379 568 1.1E-39 T 29-03-2018 CKQ55_RS00080 d8d26606d500225bc0aafdbe7c5805a5 261 SUPERFAMILY SSF109709 117 220 1.28E-16 T 29-03-2018 CKQ55_RS00080 d8d26606d500225bc0aafdbe7c5805a5 261 Gene3D G3DSA:3.90.1530.10 17 113 8.7E-8 T 29-03-2018 CKQ55_RS00080 d8d26606d500225bc0aafdbe7c5805a5 261 Gene3D G3DSA:1.10.10.10 114 205 3.8E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00080 d8d26606d500225bc0aafdbe7c5805a5 261 SUPERFAMILY SSF110849 46 124 8.89E-6 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS00450 d8d26606d500225bc0aafdbe7c5805a5 261 SUPERFAMILY SSF109709 117 220 1.28E-16 T 29-03-2018 CKQ55_RS00450 d8d26606d500225bc0aafdbe7c5805a5 261 Gene3D G3DSA:3.90.1530.10 17 113 8.7E-8 T 29-03-2018 CKQ55_RS00450 d8d26606d500225bc0aafdbe7c5805a5 261 Gene3D G3DSA:1.10.10.10 114 205 3.8E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00450 d8d26606d500225bc0aafdbe7c5805a5 261 SUPERFAMILY SSF110849 46 124 8.89E-6 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS02645 2e0ae628e06a188f59d211535a877d58 101 Pfam PF03551 Transcriptional regulator PadR-like family 15 84 4.7E-21 T 29-03-2018 IPR005149 Transcription regulator PadR, N-terminal CKQ55_RS02645 2e0ae628e06a188f59d211535a877d58 101 Gene3D G3DSA:1.10.10.10 1 93 6.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02645 2e0ae628e06a188f59d211535a877d58 101 SUPERFAMILY SSF46785 4 97 1.11E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 237 1.1E-115 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 Gene3D G3DSA:1.10.10.10 260 330 2.3E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 SMART SM00382 54 181 1.3E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.5E-32 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 7.0E-40 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 Gene3D G3DSA:1.10.8.60 187 257 6.0E-32 T 29-03-2018 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 2.0E-146 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.228 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 Gene3D G3DSA:3.40.50.300 21 184 9.4E-28 T 29-03-2018 CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 SUPERFAMILY SSF52540 23 255 1.29E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23685 2ff503662346bc9bb9dce4eec49f2b5b 336 SUPERFAMILY SSF46785 260 333 5.85E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21010 783bd960ac5b3deab707fa8de2d76ebc 120 Gene3D G3DSA:3.30.1130.10 1 120 4.9E-30 T 29-03-2018 CKQ55_RS21010 783bd960ac5b3deab707fa8de2d76ebc 120 TIGRFAM TIGR00526 folB_dom: FolB domain 7 120 1.3E-37 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS21010 783bd960ac5b3deab707fa8de2d76ebc 120 SMART SM00905 8 118 2.1E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS21010 783bd960ac5b3deab707fa8de2d76ebc 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 2.2E-24 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS21010 783bd960ac5b3deab707fa8de2d76ebc 120 SUPERFAMILY SSF55620 7 120 7.78E-30 T 29-03-2018 CKQ55_RS17030 715eb2da467e4ce29c5d5c3c3d3e0db9 358 Gene3D G3DSA:3.40.50.300 2 357 4.7E-26 T 29-03-2018 CKQ55_RS17030 715eb2da467e4ce29c5d5c3c3d3e0db9 358 Pfam PF13614 AAA domain 4 205 1.4E-20 T 29-03-2018 IPR025669 AAA domain CKQ55_RS17030 715eb2da467e4ce29c5d5c3c3d3e0db9 358 SUPERFAMILY SSF52540 4 211 3.44E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 Gene3D G3DSA:3.40.640.10 1 242 5.0E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 77.972 T 29-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 1.1E-218 T 29-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 PIRSF PIRSF000390 1 376 8.5E-118 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 3.4E-84 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 SUPERFAMILY SSF53383 2 375 2.58E-99 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS11965 a62ce6a16c589989348dac541370977b 376 Gene3D G3DSA:3.90.1150.10 243 376 1.6E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 Gene3D G3DSA:3.40.50.720 1 158 1.6E-25 T 29-03-2018 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 7.6E-51 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 SUPERFAMILY SSF56327 172 434 2.52E-87 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 Gene3D G3DSA:3.90.110.10 159 434 5.0E-88 T 29-03-2018 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 SUPERFAMILY SSF51735 3 169 3.18E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.3E-42 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 4.8E-47 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CKQ55_RS10110 038363b69126ab5cd6117726192a6833 435 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 SUPERFAMILY SSF51735 5 187 1.66E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Gene3D G3DSA:1.10.1040.10 387 473 2.1E-17 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 3.0E-62 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 1.2E-28 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 387 469 3.9E-17 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Gene3D G3DSA:1.10.1040.10 187 290 1.7E-23 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Gene3D G3DSA:3.40.50.720 2 186 4.4E-54 T 29-03-2018 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 SUPERFAMILY SSF48179 385 466 3.83E-19 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 SUPERFAMILY SSF48179 187 291 2.55E-27 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 210 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CKQ55_RS28310 96184043c9259fab8748e656f43ea4d2 473 Gene3D G3DSA:3.40.50.720 337 386 0.25 T 29-03-2018 CKQ55_RS02330 eadc1b9abc117cc7dc8e23c93760dbce 337 Gene3D G3DSA:3.40.50.720 1 180 5.0E-28 T 29-03-2018 CKQ55_RS02330 eadc1b9abc117cc7dc8e23c93760dbce 337 SUPERFAMILY SSF51735 298 335 1.28E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS02330 eadc1b9abc117cc7dc8e23c93760dbce 337 SUPERFAMILY SSF51735 1 270 1.28E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS02330 eadc1b9abc117cc7dc8e23c93760dbce 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 223 1.1E-24 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS02330 eadc1b9abc117cc7dc8e23c93760dbce 337 Gene3D G3DSA:3.90.25.10 181 336 2.4E-24 T 29-03-2018 CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 SUPERFAMILY SSF52540 108 493 1.04E-103 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 SMART SM00382 251 372 2.3E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 Pfam PF00437 Type II/IV secretion system protein 124 390 6.1E-93 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 SUPERFAMILY SSF160246 13 77 5.75E-12 T 29-03-2018 CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 Gene3D G3DSA:3.40.50.300 224 501 3.9E-61 T 29-03-2018 CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 Gene3D G3DSA:3.30.450.90 89 223 6.1E-48 T 29-03-2018 CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 318 332 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS04835 03d53c193c74f8f6c68f5b96373d81dc 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 493 1.3E-207 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CKQ55_RS21365 6243a675f7cf6ad684a6ded53b2af28a 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CKQ55_RS21365 6243a675f7cf6ad684a6ded53b2af28a 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 2.1E-12 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS21365 6243a675f7cf6ad684a6ded53b2af28a 84 Gene3D G3DSA:3.10.20.30 1 84 5.1E-16 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS21365 6243a675f7cf6ad684a6ded53b2af28a 84 SUPERFAMILY SSF54292 3 83 3.01E-22 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 Pfam PF00367 phosphotransferase system, EIIB 8 41 7.5E-15 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 535 547 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 617 3.7E-211 T 29-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 Gene3D G3DSA:3.30.1360.60 4 79 2.1E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 472 596 1.6E-49 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 SUPERFAMILY SSF55604 6 77 3.01E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 SUPERFAMILY SSF51261 468 615 5.23E-52 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 473 593 3.9E-44 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 Gene3D G3DSA:2.70.70.10 464 619 2.7E-58 T 29-03-2018 CKQ55_RS21865 4d8bd0b0a8c05ff8d50bea8cb5ae8524 619 Pfam PF02378 Phosphotransferase system, EIIC 108 392 9.1E-26 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS09315 91bb649a36c43b0b1df517d551d40eb2 172 Pfam PF15941 FidL-like putative membrane protein 74 163 3.1E-34 T 29-03-2018 IPR031854 Putative membrane protein FidL-like CKQ55_RS15975 72b3007811aa94281ea104bf3d2779fd 84 Pfam PF01722 BolA-like protein 17 74 1.3E-14 T 29-03-2018 IPR002634 BolA protein CKQ55_RS15975 72b3007811aa94281ea104bf3d2779fd 84 Gene3D G3DSA:3.30.300.90 1 83 2.1E-25 T 29-03-2018 CKQ55_RS15975 72b3007811aa94281ea104bf3d2779fd 84 PIRSF PIRSF003113 1 83 1.7E-21 T 29-03-2018 IPR002634 BolA protein CKQ55_RS15975 72b3007811aa94281ea104bf3d2779fd 84 SUPERFAMILY SSF82657 2 82 1.57E-28 T 29-03-2018 IPR002634 BolA protein CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 SMART SM00493 208 283 3.9E-7 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Pfam PF13362 Toprim domain 210 300 1.5E-11 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Gene3D G3DSA:1.10.10.10 672 768 1.0E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Gene3D G3DSA:3.40.1360.10 196 312 2.3E-14 T 29-03-2018 CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 SMART SM00778 30 66 5.7E-20 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Gene3D G3DSA:3.40.50.300 451 648 3.5E-13 T 29-03-2018 CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Gene3D G3DSA:3.90.580.10 7 93 6.9E-11 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 SUPERFAMILY SSF46785 671 769 1.01E-39 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 SUPERFAMILY SSF52540 431 619 9.49E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 SMART SM00885 336 463 1.9E-21 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Pfam PF03288 Poxvirus D5 protein-like 670 769 7.8E-21 T 29-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Pfam PF08273 Zinc-binding domain of primase-helicase 31 66 1.6E-18 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 Pfam PF08706 D5 N terminal like 339 467 1.8E-7 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CKQ55_RS06970 1ef522f30d11f4cf7eb232f57dba9ad6 777 SUPERFAMILY SSF57783 15 93 6.21E-9 T 29-03-2018 CKQ55_RS04605 52aa4936b3744cdd08c7d0ec7556f4c0 278 Pfam PF00005 ABC transporter 24 177 6.4E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04605 52aa4936b3744cdd08c7d0ec7556f4c0 278 SUPERFAMILY SSF52540 4 238 8.57E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04605 52aa4936b3744cdd08c7d0ec7556f4c0 278 SMART SM00382 29 226 5.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04605 52aa4936b3744cdd08c7d0ec7556f4c0 278 Gene3D G3DSA:3.40.50.300 1 267 4.2E-52 T 29-03-2018 CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 Gene3D G3DSA:1.10.10.10 2 87 1.2E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.4E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 Gene3D G3DSA:3.40.190.10 93 181 4.0E-12 T 29-03-2018 CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 Pfam PF03466 LysR substrate binding domain 95 296 2.0E-25 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 SUPERFAMILY SSF46785 3 83 1.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 SUPERFAMILY SSF53850 93 295 2.35E-36 T 29-03-2018 CKQ55_RS29545 5677d6ea18a655b31e122f666681bd57 299 Gene3D G3DSA:3.40.190.10 182 267 8.1E-19 T 29-03-2018 CKQ55_RS28520 fbdd456998360d117ff59cbf5ac2a71c 163 SUPERFAMILY SSF109854 9 156 9.71E-25 T 29-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CKQ55_RS28520 fbdd456998360d117ff59cbf5ac2a71c 163 Gene3D G3DSA:1.20.120.450 1 163 3.1E-15 T 29-03-2018 CKQ55_RS28520 fbdd456998360d117ff59cbf5ac2a71c 163 Pfam PF05163 DinB family 4 158 4.3E-16 T 29-03-2018 IPR007837 DNA damage-inducible protein DinB CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.809 T 29-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 Pfam PF01197 Ribosomal protein L31 1 78 1.3E-24 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 SUPERFAMILY SSF143800 1 80 1.22E-21 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 3.9E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.9E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 3.9E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS06000 d20420b4cd26643e4f024c6f8fc7c3fc 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.1E-16 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 SUPERFAMILY SSF100950 73 232 1.15E-26 T 29-03-2018 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 Pfam PF00455 DeoR C terminal sensor domain 74 230 2.5E-44 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 Gene3D G3DSA:3.40.50.1360 63 241 3.4E-37 T 29-03-2018 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.1E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.1E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 Gene3D G3DSA:1.10.10.10 1 59 1.7E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 SMART SM01134 71 232 2.6E-60 T 29-03-2018 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 SMART SM00420 6 58 3.0E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 4.9E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS21600 01a175ce63bbb6ebcf7e329782c723ce 252 SUPERFAMILY SSF46785 4 60 3.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16860 e193e2364004907a795f43cd09915e77 245 Gene3D G3DSA:3.40.1130.10 48 245 1.0E-37 T 29-03-2018 CKQ55_RS16860 e193e2364004907a795f43cd09915e77 245 Pfam PF01553 Acyltransferase 60 180 7.1E-32 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS16860 e193e2364004907a795f43cd09915e77 245 SUPERFAMILY SSF69593 2 241 3.4E-58 T 29-03-2018 CKQ55_RS16860 e193e2364004907a795f43cd09915e77 245 SMART SM00563 67 182 5.0E-39 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS16860 e193e2364004907a795f43cd09915e77 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.0E-49 T 29-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CKQ55_RS17615 736ce6ad15284aa03b47cdaf58f5d5bd 226 Gene3D G3DSA:3.40.109.10 1 221 1.8E-43 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS17615 736ce6ad15284aa03b47cdaf58f5d5bd 226 Pfam PF00881 Nitroreductase family 13 200 3.2E-27 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CKQ55_RS17615 736ce6ad15284aa03b47cdaf58f5d5bd 226 SUPERFAMILY SSF55469 126 225 1.57E-35 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS17615 736ce6ad15284aa03b47cdaf58f5d5bd 226 SUPERFAMILY SSF55469 8 67 1.57E-35 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 2.3E-134 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 SUPERFAMILY SSF101904 494 735 1.57E-49 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Gene3D G3DSA:3.90.199.10 31 212 6.8E-74 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 SUPERFAMILY SSF56719 28 479 2.35E-153 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 SMART SM00434 8 458 1.3E-238 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Gene3D G3DSA:3.30.1360.40 235 328 6.1E-23 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Gene3D G3DSA:1.10.268.10 341 480 5.2E-46 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.267 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Gene3D G3DSA:2.120.10.90 492 738 2.5E-42 T 29-03-2018 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 29-03-2018 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 692 7.0E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS16855 644ac88865e6bd6142effbf2e79866e6 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 4.7E-4 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS26145 0c8994259b8b2577dabc857e5f968dde 416 Pfam PF07690 Major Facilitator Superfamily 41 261 2.9E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS26145 0c8994259b8b2577dabc857e5f968dde 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS26145 0c8994259b8b2577dabc857e5f968dde 416 Gene3D G3DSA:1.20.1250.20 33 224 1.6E-32 T 29-03-2018 CKQ55_RS26145 0c8994259b8b2577dabc857e5f968dde 416 SUPERFAMILY SSF103473 27 415 4.05E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS26145 0c8994259b8b2577dabc857e5f968dde 416 Gene3D G3DSA:1.20.1250.20 225 416 1.0E-14 T 29-03-2018 CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 SMART SM00382 32 231 1.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 Gene3D G3DSA:3.40.50.300 1 324 2.4E-76 T 29-03-2018 CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.6E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 2.3E-27 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 Pfam PF00005 ABC transporter 24 181 1.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 SUPERFAMILY SSF52540 31 310 1.33E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14185 cc6651ce524cac8c3095425668ef14f1 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 2.8E-150 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 Gene3D G3DSA:3.30.390.30 339 462 2.1E-37 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 Gene3D G3DSA:3.40.50.720 164 338 8.3E-30 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.9E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 SUPERFAMILY SSF51905 2 337 1.54E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.5E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 SUPERFAMILY SSF55424 343 466 8.59E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 6.5E-70 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 PIRSF PIRSF000350 1 469 1.5E-87 T 29-03-2018 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CKQ55_RS08005 d1dc1726555abe3fd85b4a8b2b3f4295 474 Gene3D G3DSA:3.50.50.60 1 163 1.7E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 SMART SM00487 75 259 5.8E-27 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 SUPERFAMILY SSF52540 74 600 3.05E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Pfam PF00271 Helicase conserved C-terminal domain 286 403 3.0E-11 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 SMART SM00847 464 559 1.9E-37 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Gene3D G3DSA:3.40.50.300 253 424 1.1E-45 T 29-03-2018 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Pfam PF00270 DEAD/DEAH box helicase 84 233 1.1E-5 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 2.4E-237 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 622 698 6.9E-18 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 SMART SM00382 92 384 2.5E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Gene3D G3DSA:3.40.50.300 76 235 1.9E-29 T 29-03-2018 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 4.7E-17 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CKQ55_RS28270 8e870c1bd1c864ddcceca6501020ad30 1300 SMART SM00490 304 404 1.7E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 SUPERFAMILY SSF46785 10 65 1.34E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 1.5E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 Pfam PF00455 DeoR C terminal sensor domain 88 238 1.9E-15 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 SUPERFAMILY SSF100950 89 238 7.67E-6 T 29-03-2018 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 Gene3D G3DSA:3.40.50.1360 80 245 1.9E-11 T 29-03-2018 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 SMART SM00420 11 63 4.1E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 8.2E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 8.2E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 SMART SM01134 80 241 1.5E-17 T 29-03-2018 CKQ55_RS16265 addb89d6201f456195424603a06fb628 276 Gene3D G3DSA:1.10.10.10 3 68 6.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 Gene3D G3DSA:1.20.1250.20 263 463 1.1E-21 T 29-03-2018 CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 Gene3D G3DSA:1.20.1250.20 10 206 1.4E-29 T 29-03-2018 CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 PRINTS PR01988 Putative bacilysin exporter bacE signature 229 250 3.0E-5 T 29-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 PRINTS PR01988 Putative bacilysin exporter bacE signature 106 128 3.0E-5 T 29-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 SUPERFAMILY SSF103473 16 205 3.84E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 SUPERFAMILY SSF103473 254 461 3.84E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 Pfam PF07690 Major Facilitator Superfamily 285 459 3.1E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS29330 58c1db7ef99ee1dad84654d3347862ec 463 Pfam PF07690 Major Facilitator Superfamily 24 243 1.7E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Pfam PF04539 Sigma-70 region 3 174 248 9.2E-21 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 39.99 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 2.9E-11 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Gene3D G3DSA:1.10.601.10 2 163 5.9E-59 T 29-03-2018 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Pfam PF04545 Sigma-70, region 4 262 315 2.7E-15 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 SUPERFAMILY SSF88659 225 323 7.85E-24 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 5.0E-145 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Gene3D G3DSA:1.10.10.10 256 324 3.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Pfam PF04542 Sigma-70 region 2 94 163 3.6E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 Gene3D G3DSA:1.10.10.10 164 214 1.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18750 18280e1517e49c386a24b15e7630745f 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 4.7E-35 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 51 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 29 39 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 135 144 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 110 129 3.3E-31 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 310 2.1E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 Gene3D G3DSA:2.40.30.10 3 99 2.0E-12 T 29-03-2018 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 SUPERFAMILY SSF63380 2 99 1.19E-22 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 Gene3D G3DSA:3.10.20.30 221 322 2.0E-19 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 SUPERFAMILY SSF52343 101 223 1.44E-23 T 29-03-2018 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 SUPERFAMILY SSF54292 211 322 5.77E-23 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CKQ55_RS01385 a20be133db200c418d0491dfe07f3600 322 Gene3D G3DSA:3.40.50.80 100 220 1.4E-16 T 29-03-2018 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.5E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.5E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.5E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.5E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.5E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.5E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.032 T 29-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 SUPERFAMILY SSF118215 9 401 1.09E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 Gene3D G3DSA:1.10.3860.10 1 408 1.7E-115 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CKQ55_RS14300 e4fae99ba4febeea46cc8e1b485e81f2 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 2.7E-112 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS20360 8a4120f59090952d827aaf2899631c0c 119 Pfam PF03960 ArsC family 8 117 1.6E-21 T 29-03-2018 IPR006660 Arsenate reductase-like CKQ55_RS20360 8a4120f59090952d827aaf2899631c0c 119 SUPERFAMILY SSF52833 4 118 3.21E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS20360 8a4120f59090952d827aaf2899631c0c 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 7.7E-49 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CKQ55_RS20360 8a4120f59090952d827aaf2899631c0c 119 Gene3D G3DSA:3.40.30.10 1 119 1.2E-37 T 29-03-2018 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Pfam PF03610 PTS system fructose IIA component 513 624 9.3E-8 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Gene3D G3DSA:1.10.8.60 274 378 2.7E-4 T 29-03-2018 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 116 129 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Gene3D G3DSA:3.40.50.2300 643 726 7.0E-10 T 29-03-2018 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 SUPERFAMILY SSF46785 10 65 2.99E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Pfam PF00874 PRD domain 773 856 8.7E-7 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Gene3D G3DSA:3.40.50.300 94 273 1.7E-17 T 29-03-2018 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Gene3D G3DSA:1.10.10.10 2 69 2.3E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 SUPERFAMILY SSF52540 111 332 1.14E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 SUPERFAMILY SSF63520 764 854 2.49E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 SMART SM00382 112 262 1.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Pfam PF00158 Sigma-54 interaction domain 89 259 1.4E-44 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Gene3D G3DSA:1.10.1790.10 760 861 8.8E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 Gene3D G3DSA:3.40.50.510 501 642 3.4E-19 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS12610 7495d09420d3c3d8e8e95dfd83166c07 867 SUPERFAMILY SSF53062 511 626 2.88E-14 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS30640 49668dfda356c6cf56960d14c1e591f6 188 Pfam PF05309 TraE protein 1 182 5.3E-58 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CKQ55_RS30640 49668dfda356c6cf56960d14c1e591f6 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 3.7E-52 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 7.6E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 7.6E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 7.6E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 7.6E-51 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 240 18.251 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 7.7E-79 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 1.2E-66 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CKQ55_RS11725 1ae5666198cd7218c963db176f800961 257 ProSitePatterns PS01218 TatC family signature. 154 173 - T 29-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 Gene3D G3DSA:3.30.1050.10 528 658 4.8E-30 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 SUPERFAMILY SSF56281 28 528 2.38E-152 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 Pfam PF14863 Alkyl sulfatase dimerisation 388 526 3.8E-60 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 Pfam PF00753 Metallo-beta-lactamase superfamily 126 351 3.5E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 Gene3D G3DSA:3.60.15.10 104 377 1.9E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 Pfam PF14864 Alkyl sulfatase C-terminal 534 658 1.4E-38 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 SUPERFAMILY SSF55718 536 658 1.27E-35 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS22010 79c60a8be7720306873b82ca97ee993d 658 SMART SM00849 129 351 1.2E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 Gene3D G3DSA:1.10.287.70 154 205 1.6E-11 T 29-03-2018 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 Gene3D G3DSA:1.20.120.350 23 153 2.9E-21 T 29-03-2018 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 Gene3D G3DSA:1.20.5.110 207 243 1.1E-14 T 29-03-2018 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 215 241 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 128 154 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 186 208 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 90 110 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 18 46 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 64 87 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 PRINTS PR00169 Potassium channel signature 157 180 4.3E-33 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 SUPERFAMILY SSF81324 27 241 3.14E-46 T 29-03-2018 CKQ55_RS24655 415533bd2bc9f2bedd38d42c04441f75 278 Pfam PF00520 Ion transport protein 33 241 1.9E-26 T 29-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CKQ55_RS12310 0b576e1b514dc482b09a7945d93a805e 161 Pfam PF03737 Aldolase/RraA 5 152 1.2E-35 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CKQ55_RS12310 0b576e1b514dc482b09a7945d93a805e 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.7E-62 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CKQ55_RS12310 0b576e1b514dc482b09a7945d93a805e 161 SUPERFAMILY SSF89562 2 158 3.92E-44 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CKQ55_RS12310 0b576e1b514dc482b09a7945d93a805e 161 Gene3D G3DSA:3.50.30.40 1 161 1.7E-36 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CKQ55_RS12310 0b576e1b514dc482b09a7945d93a805e 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.4E-89 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CKQ55_RS12310 0b576e1b514dc482b09a7945d93a805e 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.717 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 SUPERFAMILY SSF54862 1 161 1.67E-43 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 SUPERFAMILY SSF54862 191 287 1.67E-43 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.40.50.720 569 651 9.9E-9 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 183 648 9.8E-250 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 PRINTS PR00419 Adrenodoxin reductase family signature 389 399 3.4E-36 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 PRINTS PR00419 Adrenodoxin reductase family signature 500 513 3.4E-36 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 PRINTS PR00419 Adrenodoxin reductase family signature 324 346 3.4E-36 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 PRINTS PR00419 Adrenodoxin reductase family signature 347 360 3.4E-36 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 PRINTS PR00419 Adrenodoxin reductase family signature 466 480 3.4E-36 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:1.10.1060.10 171 319 7.5E-37 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 199 310 8.1E-37 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.30.70.20 72 112 2.2E-15 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.50.50.60 491 568 1.6E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.50.50.60 414 490 1.8E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.40.50.720 320 413 9.6E-17 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 323 635 2.4E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 SUPERFAMILY SSF51971 322 577 6.47E-66 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.30.70.20 20 71 5.9E-8 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Pfam PF13247 4Fe-4S dicluster domain 55 144 2.2E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.30.70.20 2 19 0.16 T 29-03-2018 CKQ55_RS20435 cf006750800479bd2e571f0d50f3c135 654 Gene3D G3DSA:3.30.70.20 113 152 0.21 T 29-03-2018 CKQ55_RS17940 a83035a8d264793b4835ca8a6ac1ca57 375 Gene3D G3DSA:2.130.10.10 11 375 5.0E-35 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS17940 a83035a8d264793b4835ca8a6ac1ca57 375 Pfam PF14583 Oligogalacturonate lyase 2 375 9.8E-190 T 29-03-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 CKQ55_RS17940 a83035a8d264793b4835ca8a6ac1ca57 375 SUPERFAMILY SSF82171 164 371 3.27E-33 T 29-03-2018 CKQ55_RS17940 a83035a8d264793b4835ca8a6ac1ca57 375 SUPERFAMILY SSF82171 12 130 3.27E-33 T 29-03-2018 CKQ55_RS06775 01598b5d5d7ddda10ffc8cc537ae7d98 272 Gene3D G3DSA:3.40.50.300 20 272 3.2E-79 T 29-03-2018 CKQ55_RS06775 01598b5d5d7ddda10ffc8cc537ae7d98 272 PIRSF PIRSF039085 20 264 3.4E-103 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS06775 01598b5d5d7ddda10ffc8cc537ae7d98 272 Pfam PF00005 ABC transporter 39 188 2.2E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06775 01598b5d5d7ddda10ffc8cc537ae7d98 272 SUPERFAMILY SSF52540 24 258 2.55E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06775 01598b5d5d7ddda10ffc8cc537ae7d98 272 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06775 01598b5d5d7ddda10ffc8cc537ae7d98 272 SMART SM00382 48 236 8.8E-21 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 SMART SM00862 153 229 9.8E-32 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 Pfam PF00072 Response regulator receiver domain 5 114 4.2E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 SUPERFAMILY SSF52172 3 170 2.78E-41 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 SUPERFAMILY SSF46894 141 229 2.66E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 Gene3D G3DSA:1.10.10.10 125 236 9.1E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 1.7E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 SMART SM00448 3 114 1.5E-42 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS02380 67680d9a0344c9bb532b40dc81da72d8 238 Gene3D G3DSA:3.40.50.2300 1 124 8.1E-38 T 29-03-2018 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.0E-40 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.7E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 9.7E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 9.7E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.7E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 9.7E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 PIRSF PIRSF000349 1 193 4.2E-86 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 Gene3D G3DSA:1.10.287.990 20 82 1.9E-28 T 29-03-2018 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 SUPERFAMILY SSF46609 1 84 4.06E-36 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 SUPERFAMILY SSF54719 82 191 2.36E-44 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS25600 aa61a1820764bf4a6ed1e8d8677837fe 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 7.2E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 Pfam PF00890 FAD binding domain 9 405 8.5E-118 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.4E-5 T 29-03-2018 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.4E-5 T 29-03-2018 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 Gene3D G3DSA:1.20.58.100 431 540 2.3E-36 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 Gene3D G3DSA:3.50.50.60 302 429 4.2E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 Gene3D G3DSA:3.50.50.60 3 294 7.8E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 4.6E-36 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 PIRSF PIRSF000171 1 579 9.3E-47 T 29-03-2018 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 3.0E-241 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.1E-275 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 Gene3D G3DSA:4.10.80.40 541 588 5.2E-12 T 29-03-2018 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 SUPERFAMILY SSF51905 4 259 2.55E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 SUPERFAMILY SSF51905 359 442 2.55E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03740 d0d6471cdfd4c380e880064252b536d3 588 SUPERFAMILY SSF46977 452 588 1.15E-46 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS15190 9bfa25bb82292942a4cdcf8f56c6f8f8 239 SUPERFAMILY SSF55811 16 157 1.06E-30 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS15190 9bfa25bb82292942a4cdcf8f56c6f8f8 239 Gene3D G3DSA:3.90.79.10 21 160 9.4E-34 T 29-03-2018 CKQ55_RS15190 9bfa25bb82292942a4cdcf8f56c6f8f8 239 Pfam PF00293 NUDIX domain 26 147 6.3E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS15190 9bfa25bb82292942a4cdcf8f56c6f8f8 239 Gene3D G3DSA:1.10.10.10 161 237 1.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15190 9bfa25bb82292942a4cdcf8f56c6f8f8 239 SUPERFAMILY SSF46785 164 234 1.93E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 Gene3D G3DSA:1.10.10.60 150 199 1.4E-7 T 29-03-2018 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 Gene3D G3DSA:3.40.50.1390 4 128 1.8E-32 T 29-03-2018 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 SUPERFAMILY SSF53041 4 159 5.36E-30 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 ProSitePatterns PS00398 Site-specific recombinases signature 2. 64 76 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 Pfam PF00239 Resolvase, N terminal domain 5 159 2.4E-28 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 Gene3D G3DSA:1.20.5.40 129 149 0.011 T 29-03-2018 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 8.6E-6 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS24725 2f0cce1598566ca7f8133164d9527ea5 207 SMART SM00857 5 159 6.0E-38 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS25185 bd1f30530a343273a9a32ea15a0e5389 229 Pfam PF09850 Type VI secretion system protein DotU 14 215 7.0E-36 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CKQ55_RS25185 bd1f30530a343273a9a32ea15a0e5389 229 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 219 2.0E-30 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CKQ55_RS21290 967f562c9f8a1039bfe08914a6cd3d84 326 Gene3D G3DSA:1.10.10.60 252 324 9.4E-8 T 29-03-2018 CKQ55_RS21290 967f562c9f8a1039bfe08914a6cd3d84 326 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 323 5.9E-57 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS21290 967f562c9f8a1039bfe08914a6cd3d84 326 Pfam PF04754 Putative transposase, YhgA-like 8 209 7.6E-88 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS27860 0f1a3b12ad589a8de0da6b7cc6edc331 259 SUPERFAMILY SSF52540 9 252 2.54E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27860 0f1a3b12ad589a8de0da6b7cc6edc331 259 SMART SM00382 33 230 3.3E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27860 0f1a3b12ad589a8de0da6b7cc6edc331 259 PIRSF PIRSF039085 5 258 4.0E-107 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS27860 0f1a3b12ad589a8de0da6b7cc6edc331 259 Gene3D G3DSA:3.40.50.300 6 258 3.7E-77 T 29-03-2018 CKQ55_RS27860 0f1a3b12ad589a8de0da6b7cc6edc331 259 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27860 0f1a3b12ad589a8de0da6b7cc6edc331 259 Pfam PF00005 ABC transporter 24 182 1.4E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 Hamap MF_00970 Ribonuclease E [rne]. 1 1070 39.312 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1046 1081 6.5E-16 T 29-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 Pfam PF10150 Ribonuclease E/G family 121 391 4.7E-93 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 SMART SM00316 37 119 7.0E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 2.4E-171 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 Gene3D G3DSA:2.40.50.140 33 124 2.8E-31 T 29-03-2018 CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 SUPERFAMILY SSF50249 40 124 1.51E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS00825 fe9dd08e90afc79b7d6daa6e5069eae1 1084 Pfam PF00575 S1 RNA binding domain 36 118 3.7E-16 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 171 1.2E-41 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.176 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 SUPERFAMILY SSF52540 11 205 2.91E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.6E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 1.5E-118 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 SUPERFAMILY SSF54814 182 297 9.16E-41 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 Gene3D G3DSA:3.40.50.300 26 179 5.1E-27 T 29-03-2018 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 Pfam PF07650 KH domain 209 285 1.8E-19 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 Gene3D G3DSA:3.40.50.300 8 25 0.018 T 29-03-2018 CKQ55_RS19960 422d761d42bccf8490b25c7557fd8123 301 Gene3D G3DSA:3.30.300.20 186 300 1.2E-42 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Pfam PF02540 NAD synthase 216 256 5.5E-7 T 29-03-2018 IPR022310 NAD/GMP synthase CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.4E-44 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Gene3D G3DSA:3.40.50.620 223 400 1.8E-35 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 SUPERFAMILY SSF52402 197 420 1.28E-59 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Gene3D G3DSA:3.30.300.10 401 525 4.8E-53 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 3.0E-41 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 6.4E-7 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 6.4E-7 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 6.4E-7 T 29-03-2018 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.362 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 Gene3D G3DSA:3.40.50.880 5 222 1.9E-49 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.2E-84 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 1.8E-155 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CKQ55_RS20265 bccd785f4fbd982c0aa32f3ee67efc03 525 SUPERFAMILY SSF52317 5 204 2.21E-58 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 SMART SM00861 5 170 3.9E-27 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 Pfam PF02780 Transketolase, C-terminal domain 182 303 1.4E-27 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 SUPERFAMILY SSF52518 6 175 2.3E-37 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 Gene3D G3DSA:3.40.50.920 181 311 3.9E-35 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 Pfam PF02779 Transketolase, pyrimidine binding domain 15 168 3.4E-19 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 SUPERFAMILY SSF52922 176 310 5.5E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS04500 cc3db720706596ba7add65d66707a4c1 311 Gene3D G3DSA:3.40.50.970 2 180 9.8E-30 T 29-03-2018 CKQ55_RS07340 63fdb30b0ea14fb899de04854c55fe40 193 Gene3D G3DSA:3.40.50.10490 1 193 2.1E-41 T 29-03-2018 CKQ55_RS07340 63fdb30b0ea14fb899de04854c55fe40 193 SUPERFAMILY SSF53697 1 189 1.33E-52 T 29-03-2018 CKQ55_RS07340 63fdb30b0ea14fb899de04854c55fe40 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.337 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CKQ55_RS07340 63fdb30b0ea14fb899de04854c55fe40 193 Pfam PF13580 SIS domain 12 146 8.1E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS07340 63fdb30b0ea14fb899de04854c55fe40 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.4E-83 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 SMART SM00357 3 67 4.1E-28 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 Gene3D G3DSA:2.40.50.140 1 76 1.1E-26 T 29-03-2018 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.1E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 PRINTS PR00050 Cold shock protein signature 4 19 8.7E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 PRINTS PR00050 Cold shock protein signature 25 34 8.7E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 PRINTS PR00050 Cold shock protein signature 40 58 8.7E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 SUPERFAMILY SSF50249 1 66 5.39E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 PIRSF PIRSF002599 1 76 1.1E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS02270 f3cf6d3c57ec5b01175e514d605753b3 76 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.3E-42 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 CKQ55_RS01035 1eaf16a59cb3811cb0d59e41fc653598 354 Gene3D G3DSA:3.40.50.300 145 353 9.0E-22 T 29-03-2018 CKQ55_RS01035 1eaf16a59cb3811cb0d59e41fc653598 354 SUPERFAMILY SSF52540 148 331 1.12E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01035 1eaf16a59cb3811cb0d59e41fc653598 354 Pfam PF02562 PhoH-like protein 149 353 8.3E-77 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Gene3D G3DSA:3.30.450.40 44 104 0.01 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Pfam PF00158 Sigma-54 interaction domain 308 461 2.9E-57 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Gene3D G3DSA:3.30.450.40 105 195 1.0E-5 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Gene3D G3DSA:3.40.50.300 294 465 5.3E-22 T 29-03-2018 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Gene3D G3DSA:1.10.8.60 466 534 1.3E-13 T 29-03-2018 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 SUPERFAMILY SSF52540 308 535 1.49E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Gene3D G3DSA:1.10.10.60 535 591 7.9E-12 T 29-03-2018 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Pfam PF01590 GAF domain 55 188 3.9E-6 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 SMART SM00382 314 458 3.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 Pfam PF02954 Bacterial regulatory protein, Fis family 554 586 2.0E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 556 573 3.0E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 573 593 3.0E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 SUPERFAMILY SSF46689 505 588 5.08E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS19440 bc9b18d35d46b3ae20187dbd6c8adddd 595 SUPERFAMILY SSF55781 45 190 2.16E-9 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS29570 72b462b9b7f751cf702d9bba4664f4b3 212 Gene3D G3DSA:2.40.160.20 22 212 9.1E-35 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS29570 72b462b9b7f751cf702d9bba4664f4b3 212 SUPERFAMILY SSF56925 23 212 7.06E-26 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS29570 72b462b9b7f751cf702d9bba4664f4b3 212 Pfam PF03922 OmpW family 23 212 4.8E-71 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 Gene3D G3DSA:3.40.50.1360 77 238 3.8E-24 T 29-03-2018 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.5E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.5E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 SMART SM00420 6 58 3.3E-19 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 SMART SM01134 74 232 1.7E-36 T 29-03-2018 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 SUPERFAMILY SSF100950 75 233 7.12E-23 T 29-03-2018 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.4E-36 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 SUPERFAMILY SSF46785 5 60 4.55E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.7E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS10450 a8d26d7fdea133690a9ee12af29d0eb9 251 Gene3D G3DSA:1.10.10.10 1 76 2.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00760 93dcaaaaf453d81730d2db8a638e9ff8 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 5.5E-110 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CKQ55_RS00760 93dcaaaaf453d81730d2db8a638e9ff8 269 Gene3D G3DSA:3.30.470.10 1 110 7.6E-24 T 29-03-2018 CKQ55_RS00760 93dcaaaaf453d81730d2db8a638e9ff8 269 SUPERFAMILY SSF56752 2 262 1.83E-70 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS00760 93dcaaaaf453d81730d2db8a638e9ff8 269 Gene3D G3DSA:3.20.10.10 113 259 3.0E-35 T 29-03-2018 CKQ55_RS00760 93dcaaaaf453d81730d2db8a638e9ff8 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS00760 93dcaaaaf453d81730d2db8a638e9ff8 269 Pfam PF01063 Amino-transferase class IV 24 247 3.5E-48 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS25640 1165edfd12a6fa69a939a683bc021690 298 Pfam PF00248 Aldo/keto reductase family 18 291 2.0E-57 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS25640 1165edfd12a6fa69a939a683bc021690 298 Gene3D G3DSA:3.20.20.100 1 298 6.3E-62 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS25640 1165edfd12a6fa69a939a683bc021690 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.6E-7 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS25640 1165edfd12a6fa69a939a683bc021690 298 PRINTS PR00069 Aldo-keto reductase signature 225 249 3.6E-7 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS25640 1165edfd12a6fa69a939a683bc021690 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.6E-7 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS25640 1165edfd12a6fa69a939a683bc021690 298 SUPERFAMILY SSF51430 7 295 4.06E-73 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS26040 70ca36ff82a34da53eb1f966c2091695 301 Gene3D G3DSA:1.10.8.10 241 270 1.0E-11 T 29-03-2018 CKQ55_RS26040 70ca36ff82a34da53eb1f966c2091695 301 Gene3D G3DSA:3.40.50.10490 6 240 5.2E-33 T 29-03-2018 CKQ55_RS26040 70ca36ff82a34da53eb1f966c2091695 301 SUPERFAMILY SSF53697 10 246 5.34E-44 T 29-03-2018 CKQ55_RS26040 70ca36ff82a34da53eb1f966c2091695 301 Pfam PF13580 SIS domain 39 164 1.1E-6 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 Gene3D G3DSA:3.30.2140.10 145 255 2.0E-15 T 29-03-2018 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 SUPERFAMILY SSF54001 4 253 8.83E-74 T 29-03-2018 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 Pfam PF00797 N-acetyltransferase 26 253 4.2E-62 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 1.5E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 24 47 1.5E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 48 71 1.5E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS28420 be98f1dbd96cbd363519f496a570f9e1 255 Gene3D G3DSA:3.30.2140.10 2 144 8.6E-37 T 29-03-2018 CKQ55_RS26075 04e2c0ab1fb66ee11a66972fb301a5cb 277 SUPERFAMILY SSF52096 5 222 8.08E-38 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS26075 04e2c0ab1fb66ee11a66972fb301a5cb 277 Pfam PF01039 Carboxyl transferase domain 12 231 1.2E-16 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CKQ55_RS26075 04e2c0ab1fb66ee11a66972fb301a5cb 277 Gene3D G3DSA:3.90.226.10 3 277 8.7E-41 T 29-03-2018 CKQ55_RS26075 04e2c0ab1fb66ee11a66972fb301a5cb 277 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 5 276 9.7E-116 T 29-03-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.9E-188 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.6E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 5.0E-32 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 SMART SM00829 12 338 6.2E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.856 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 Gene3D G3DSA:3.90.180.10 1 152 3.9E-46 T 29-03-2018 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 SUPERFAMILY SSF51735 141 305 4.76E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 Gene3D G3DSA:3.40.50.10730 153 302 1.7E-26 T 29-03-2018 CKQ55_RS13800 9cfafada94970b877b8fa83240c4cbf8 341 SUPERFAMILY SSF50129 1 173 1.49E-53 T 29-03-2018 IPR011032 GroES-like CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 290 2.3E-56 T 29-03-2018 CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 SUPERFAMILY SSF51735 49 291 1.09E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 Gene3D G3DSA:3.40.50.720 13 294 1.7E-76 T 29-03-2018 CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 1.5E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 1.5E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 1.5E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 6.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 6.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 6.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 6.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 6.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27325 1ae90a7518d7a416bee3a34b80f058fa 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 6.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 SMART SM00387 348 449 8.8E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Gene3D G3DSA:3.30.565.10 297 449 1.0E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 SUPERFAMILY SSF47384 219 301 1.86E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 SUPERFAMILY SSF55874 291 448 3.41E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Gene3D G3DSA:1.20.5.1040 130 183 6.9E-12 T 29-03-2018 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Gene3D G3DSA:1.20.5.1040 7 60 1.2E-9 T 29-03-2018 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 159 9.7E-6 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 445 9.9E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 SMART SM00388 236 302 4.6E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 8.1E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 8.1E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 1.9E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS16835 992859248f88ea595d305475aaf6b7ab 449 Gene3D G3DSA:1.10.287.130 221 296 5.8E-12 T 29-03-2018 CKQ55_RS24830 6474789fbbcc6a01302294224d407756 154 Gene3D G3DSA:3.90.1720.10 33 154 2.0E-36 T 29-03-2018 CKQ55_RS24830 6474789fbbcc6a01302294224d407756 154 Pfam PF00877 NlpC/P60 family 47 153 1.0E-30 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CKQ55_RS24830 6474789fbbcc6a01302294224d407756 154 SUPERFAMILY SSF54001 33 154 6.21E-40 T 29-03-2018 CKQ55_RS31105 e2d486658c8a4fe9b446003751d36a66 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 37 61 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CKQ55_RS31105 e2d486658c8a4fe9b446003751d36a66 74 SUPERFAMILY SSF57716 36 73 1.71E-7 T 29-03-2018 CKQ55_RS31105 e2d486658c8a4fe9b446003751d36a66 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 66 9.3E-9 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CKQ55_RS17405 2ade154e3e4fac8148bc22f04d2b897d 369 Pfam PF03841 L-seryl-tRNA selenium transferase 14 268 4.3E-19 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CKQ55_RS17405 2ade154e3e4fac8148bc22f04d2b897d 369 SUPERFAMILY SSF53383 12 365 2.65E-34 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS17405 2ade154e3e4fac8148bc22f04d2b897d 369 Gene3D G3DSA:3.40.640.10 30 264 1.4E-22 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS17405 2ade154e3e4fac8148bc22f04d2b897d 369 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 5 363 6.5E-162 T 29-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CKQ55_RS20525 d286b003e8964ac6ab96faad18a860cd 297 PIRSF PIRSF018982 49 297 4.6E-101 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS20525 d286b003e8964ac6ab96faad18a860cd 297 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 59 296 40.52 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS20525 d286b003e8964ac6ab96faad18a860cd 297 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 68 295 4.5E-78 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 Gene3D G3DSA:3.40.190.10 88 178 5.1E-17 T 29-03-2018 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 Gene3D G3DSA:3.40.190.10 179 269 5.5E-19 T 29-03-2018 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 SUPERFAMILY SSF53850 88 289 6.11E-30 T 29-03-2018 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 Gene3D G3DSA:1.10.10.10 1 83 8.4E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 SUPERFAMILY SSF46785 1 85 8.66E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-25 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25345 4c10bee0af52b3fed9521bda329612fd 290 Pfam PF03466 LysR substrate binding domain 87 289 2.8E-33 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 Gene3D G3DSA:3.40.50.1220 191 355 2.3E-54 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 6.0E-57 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 Gene3D G3DSA:3.40.50.970 1 188 2.9E-64 T 29-03-2018 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 5.4E-50 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 Gene3D G3DSA:3.40.50.970 356 558 1.1E-53 T 29-03-2018 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.1E-45 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 2.0E-277 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 SUPERFAMILY SSF52518 371 567 1.64E-69 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 SUPERFAMILY SSF52518 2 178 4.98E-63 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CKQ55_RS08200 4d5d38a5784843d7a63764b14dabe908 574 SUPERFAMILY SSF52467 189 362 1.36E-62 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS04325 ee50dbe1ef4a8ad6c6a1e5782f315434 412 SUPERFAMILY SSF51556 51 371 4.17E-103 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS04325 ee50dbe1ef4a8ad6c6a1e5782f315434 412 Gene3D G3DSA:3.20.20.140 61 359 4.3E-37 T 29-03-2018 CKQ55_RS04325 ee50dbe1ef4a8ad6c6a1e5782f315434 412 Gene3D G3DSA:2.30.40.10 3 60 4.4E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS04325 ee50dbe1ef4a8ad6c6a1e5782f315434 412 SUPERFAMILY SSF51338 5 50 1.16E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS04325 ee50dbe1ef4a8ad6c6a1e5782f315434 412 SUPERFAMILY SSF51338 362 403 1.16E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS04325 ee50dbe1ef4a8ad6c6a1e5782f315434 412 Pfam PF07969 Amidohydrolase family 110 400 6.8E-37 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 Gene3D G3DSA:3.40.1280.10 77 243 1.0E-48 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 Gene3D G3DSA:3.30.1330.30 1 76 4.9E-18 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 8.8E-40 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 SMART SM00967 4 80 6.1E-22 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 SUPERFAMILY SSF55315 2 76 1.29E-20 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 SUPERFAMILY SSF75217 68 242 1.05E-48 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 1.7E-18 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 2.5E-91 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CKQ55_RS10480 6b8f980694d6bb5634a3f8eb3221104f 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.225 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 89 3.4E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 Gene3D G3DSA:1.10.10.60 78 169 4.9E-8 T 29-03-2018 CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 56 1.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 64 87 1.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 SUPERFAMILY SSF46689 32 100 7.7E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 Gene3D G3DSA:1.10.10.60 23 77 2.1E-13 T 29-03-2018 CKQ55_RS28895 283556662778a950659ca0f3b0157a2a 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 55 86 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 Pfam PF13476 AAA domain 5 206 1.3E-19 T 29-03-2018 CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 Gene3D G3DSA:3.40.50.300 774 1039 1.8E-16 T 29-03-2018 CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1036 5.4E-279 T 29-03-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 Gene3D G3DSA:3.40.50.300 1 237 2.1E-34 T 29-03-2018 CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 SUPERFAMILY SSF52540 824 1030 2.05E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 SUPERFAMILY SSF52540 2 219 2.05E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06515 e2b03aa6d8cc5fbc8721f09f19fccebd 1044 Pfam PF13558 Putative exonuclease SbcCD, C subunit 928 998 5.8E-15 T 29-03-2018 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 SUPERFAMILY SSF47413 4 60 9.38E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 Gene3D G3DSA:3.40.50.2300 187 326 3.7E-14 T 29-03-2018 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 Gene3D G3DSA:3.40.50.2300 83 186 1.4E-6 T 29-03-2018 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 49 3.4E-9 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 Pfam PF13407 Periplasmic binding protein domain 109 316 1.2E-20 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 SUPERFAMILY SSF53822 68 329 1.02E-26 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 SMART SM00354 5 78 1.2E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS27385 e3818568538c91eb5b2c2217e591f4b2 344 Gene3D G3DSA:1.10.260.40 6 82 1.3E-15 T 29-03-2018 CKQ55_RS17045 6a6d743db065fdd947f39492102c6c9b 340 Gene3D G3DSA:1.10.150.130 187 322 6.2E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS17045 6a6d743db065fdd947f39492102c6c9b 340 SUPERFAMILY SSF56349 194 319 7.89E-15 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS17045 6a6d743db065fdd947f39492102c6c9b 340 Pfam PF13102 Phage integrase SAM-like domain 198 314 5.6E-9 T 29-03-2018 IPR025269 Phage integrase SAM-like domain CKQ55_RS05280 5ac80c63ae3f809d96564eb452031adf 147 Pfam PF00436 Single-strand binding protein family 4 99 1.6E-15 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CKQ55_RS05280 5ac80c63ae3f809d96564eb452031adf 147 Gene3D G3DSA:2.40.50.140 1 122 8.4E-21 T 29-03-2018 CKQ55_RS05280 5ac80c63ae3f809d96564eb452031adf 147 SUPERFAMILY SSF50249 1 145 1.78E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS05280 5ac80c63ae3f809d96564eb452031adf 147 PIRSF PIRSF002070 1 146 1.9E-25 T 29-03-2018 CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 SUPERFAMILY SSF46785 7 86 2.08E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 Gene3D G3DSA:3.40.190.10 195 280 4.1E-11 T 29-03-2018 CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.5E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 Pfam PF03466 LysR substrate binding domain 111 313 2.5E-11 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 Hamap MF_01607 HTH-type transcriptional regulator YidZ [yidZ]. 1 319 70.107 T 29-03-2018 IPR023746 Transcription regulator HTH, YidZ GO:0003700|GO:0006355 CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 Gene3D G3DSA:3.40.190.10 98 194 5.4E-6 T 29-03-2018 CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 Gene3D G3DSA:1.10.10.10 2 88 9.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13025 17c9d423d439cd2889ee5e6e4c2eef62 319 SUPERFAMILY SSF53850 97 314 4.5E-25 T 29-03-2018 CKQ55_RS00495 35f895f5bec0fb6d986114a8fac74e0b 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 1.6E-239 T 29-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CKQ55_RS00495 35f895f5bec0fb6d986114a8fac74e0b 416 Gene3D G3DSA:3.40.718.10 10 416 2.9E-134 T 29-03-2018 CKQ55_RS00495 35f895f5bec0fb6d986114a8fac74e0b 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 3.7E-118 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS00495 35f895f5bec0fb6d986114a8fac74e0b 416 SUPERFAMILY SSF53659 3 416 1.38E-150 T 29-03-2018 CKQ55_RS00495 35f895f5bec0fb6d986114a8fac74e0b 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS00495 35f895f5bec0fb6d986114a8fac74e0b 416 SMART SM01329 28 412 6.0E-182 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS06010 95f58db890ebcff4140fa7f539c2879b 423 SUPERFAMILY SSF56935 31 423 6.71E-109 T 29-03-2018 CKQ55_RS06010 95f58db890ebcff4140fa7f539c2879b 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 38 418 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS06010 95f58db890ebcff4140fa7f539c2879b 423 Pfam PF02264 LamB porin 33 423 2.2E-110 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS06010 95f58db890ebcff4140fa7f539c2879b 423 Hamap MF_01301 Maltoporin [lamB]. 2 423 43.654 T 29-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 CKQ55_RS06010 95f58db890ebcff4140fa7f539c2879b 423 Gene3D G3DSA:2.40.170.10 31 423 1.6E-117 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS24995 abf9b5f79041a5dc6a94bee8dc9b9a4e 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24995 abf9b5f79041a5dc6a94bee8dc9b9a4e 249 Pfam PF00005 ABC transporter 21 154 3.3E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24995 abf9b5f79041a5dc6a94bee8dc9b9a4e 249 SUPERFAMILY SSF52540 14 212 8.04E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24995 abf9b5f79041a5dc6a94bee8dc9b9a4e 249 SMART SM00382 28 203 1.1E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24995 abf9b5f79041a5dc6a94bee8dc9b9a4e 249 Gene3D G3DSA:3.40.50.300 2 230 2.0E-44 T 29-03-2018 CKQ55_RS01260 c6b6f6e2fb35a848b087868d5364e485 178 SUPERFAMILY SSF46894 107 172 1.97E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS01260 c6b6f6e2fb35a848b087868d5364e485 178 Pfam PF00196 Bacterial regulatory proteins, luxR family 116 168 4.3E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS01260 c6b6f6e2fb35a848b087868d5364e485 178 Gene3D G3DSA:1.10.10.10 81 175 1.6E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01260 c6b6f6e2fb35a848b087868d5364e485 178 SMART SM00421 113 170 6.9E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 Pfam PF00155 Aminotransferase class I and II 27 392 2.0E-87 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 Gene3D G3DSA:3.90.1150.10 257 397 1.7E-48 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 Gene3D G3DSA:3.90.1150.10 1 81 3.9E-11 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 5.7E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 5.7E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 5.7E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 5.7E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 Gene3D G3DSA:3.40.640.10 97 256 4.3E-12 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS11105 4622c8c8bd624d24ec30320622b91cf0 397 SUPERFAMILY SSF53383 2 395 1.1E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.9E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.9E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 SMART SM00354 1 71 2.8E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 Pfam PF13377 Periplasmic binding protein-like domain 161 294 4.1E-9 T 29-03-2018 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 Gene3D G3DSA:3.40.50.2300 57 164 1.4E-10 T 29-03-2018 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 Gene3D G3DSA:1.10.260.40 2 56 3.6E-22 T 29-03-2018 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 Gene3D G3DSA:3.40.50.2300 165 297 1.8E-15 T 29-03-2018 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 SUPERFAMILY SSF47413 2 59 4.13E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS13330 b1f262b15547f70e76a226a3923b3e79 313 SUPERFAMILY SSF53822 59 295 4.71E-19 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS20305 fce89c2c694bebfe2990a0b5fbe871f1 365 Gene3D G3DSA:1.50.10.10 1 362 5.1E-71 T 29-03-2018 CKQ55_RS20305 fce89c2c694bebfe2990a0b5fbe871f1 365 Pfam PF07470 Glycosyl Hydrolase Family 88 24 361 4.1E-87 T 29-03-2018 IPR010905 Glycosyl hydrolase, family 88 CKQ55_RS20305 fce89c2c694bebfe2990a0b5fbe871f1 365 SUPERFAMILY SSF48208 21 361 3.06E-73 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 PIRSF PIRSF000521 20 149 6.0E-8 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 PIRSF PIRSF000521 142 456 1.6E-35 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 Gene3D G3DSA:3.90.1150.10 18 193 3.8E-39 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 Gene3D G3DSA:3.90.1150.10 279 456 3.4E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 22 455 4.8E-213 T 29-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 Gene3D G3DSA:3.90.1150.10 198 278 4.8E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 Pfam PF00202 Aminotransferase class-III 40 453 2.4E-100 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS27420 956f7a5f72994bbea9a47be949a6ebf3 461 SUPERFAMILY SSF53383 31 453 5.27E-125 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PIRSF PIRSF001400 1 430 2.4E-192 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 SMART SM01193 4 134 1.7E-93 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 SUPERFAMILY SSF54826 3 138 5.11E-56 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 4.9E-206 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 Gene3D G3DSA:3.20.20.120 128 431 3.5E-105 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PRINTS PR00148 Enolase signature 165 178 2.1E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PRINTS PR00148 Enolase signature 339 353 2.1E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PRINTS PR00148 Enolase signature 368 385 2.1E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PRINTS PR00148 Enolase signature 37 51 2.1E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PRINTS PR00148 Enolase signature 316 327 2.1E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 PRINTS PR00148 Enolase signature 107 123 2.1E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 Gene3D G3DSA:3.30.390.10 3 127 5.7E-51 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 2.3E-142 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 Pfam PF03952 Enolase, N-terminal domain 4 134 1.1E-57 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 SUPERFAMILY SSF51604 143 427 4.24E-128 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 Hamap MF_00318 Enolase [eno]. 2 416 44.183 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18600 ec80a5f6aedc561177b0baca8425ff86 432 SMART SM01192 143 430 1.4E-214 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS05170 c097769e7762f052e34a13c4f244ca87 510 SUPERFAMILY SSF46894 2 102 2.07E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS05170 c097769e7762f052e34a13c4f244ca87 510 Gene3D G3DSA:1.25.40.10 349 507 4.9E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS05170 c097769e7762f052e34a13c4f244ca87 510 SMART SM00862 24 100 2.2E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS05170 c097769e7762f052e34a13c4f244ca87 510 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 2.6E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS05170 c097769e7762f052e34a13c4f244ca87 510 Gene3D G3DSA:1.10.10.10 1 106 1.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Gene3D G3DSA:1.10.8.60 779 873 3.1E-12 T 29-03-2018 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Gene3D G3DSA:1.10.8.60 377 558 4.6E-38 T 29-03-2018 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 348 5.4E-9 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 69 0.011 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 773 4.1E-38 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 SUPERFAMILY SSF52540 557 844 1.48E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 11 860 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Gene3D G3DSA:1.10.1780.10 1 159 2.1E-31 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 SUPERFAMILY SSF52540 192 519 2.45E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 779 853 1.8E-12 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Gene3D G3DSA:3.40.50.300 190 375 2.9E-22 T 29-03-2018 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 SUPERFAMILY SSF81923 12 125 2.09E-19 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 Gene3D G3DSA:3.40.50.300 563 778 3.8E-37 T 29-03-2018 CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 SMART SM01086 779 872 2.9E-9 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 SMART SM00382 231 376 3.7E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28975 32c6e0575d9d807d2019a6f0e209588e 880 SMART SM00382 608 759 6.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 Pfam PF07687 Peptidase dimerisation domain 171 278 3.3E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 Pfam PF01546 Peptidase family M20/M25/M40 67 376 2.3E-33 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 SUPERFAMILY SSF53187 303 376 3.71E-58 T 29-03-2018 CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 SUPERFAMILY SSF53187 3 174 3.71E-58 T 29-03-2018 CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 66 75 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 SUPERFAMILY SSF55031 175 278 3.89E-20 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 101 138 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 Gene3D G3DSA:3.40.630.10 1 280 3.2E-58 T 29-03-2018 CKQ55_RS28530 0e4af326e5190cdbf4ba2b89918d59b2 389 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 7 376 4.9E-115 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 Gene3D G3DSA:3.50.50.60 1 391 6.0E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 SUPERFAMILY SSF51905 6 320 9.27E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 8 537 2.2E-259 T 29-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 1.5E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 1.5E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 309 315 1.5E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 1.5E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 1.5E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 1.5E-23 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 Pfam PF04324 BFD-like [2Fe-2S] binding domain 430 482 2.3E-9 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS21340 a30e57d565f1d2fecf4a48fd8ad11afc 540 Pfam PF01266 FAD dependent oxidoreductase 8 357 5.7E-53 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.965 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 SUPERFAMILY SSF54506 2 273 1.18E-55 T 29-03-2018 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 5.8E-104 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 Gene3D G3DSA:3.10.310.10 1 124 7.1E-48 T 29-03-2018 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 Pfam PF01678 Diaminopimelate epimerase 152 266 3.8E-33 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 Pfam PF01678 Diaminopimelate epimerase 3 123 6.7E-35 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CKQ55_RS11860 eb95412e6a04680e839aaf45d5d9f572 274 Gene3D G3DSA:3.10.310.10 125 261 9.6E-52 T 29-03-2018 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 SUPERFAMILY SSF46689 282 328 1.43E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 Gene3D G3DSA:1.10.10.60 280 328 6.6E-11 T 29-03-2018 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 Gene3D G3DSA:1.10.10.60 227 279 9.4E-14 T 29-03-2018 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 SUPERFAMILY SSF46689 229 279 1.7E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 SMART SM00342 245 327 1.5E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 323 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS07165 b1e0add9b75d7093c9ae3dfc66a2be2c 330 Pfam PF12833 Helix-turn-helix domain 251 326 8.2E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 Pfam PF07694 5TMR of 5TMR-LYT 29 192 6.4E-44 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 SMART SM00387 452 554 1.4E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 Gene3D G3DSA:1.20.1250.20 106 282 6.0E-5 T 29-03-2018 CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 SUPERFAMILY SSF55874 414 551 5.24E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 Pfam PF06580 Histidine kinase 359 438 1.8E-24 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 1.6E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 Gene3D G3DSA:3.30.450.40 286 335 1.0E-4 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 SUPERFAMILY SSF55781 226 345 3.36E-9 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS20785 f0d94adbc40dc0d4964d4a1a267709b0 565 Gene3D G3DSA:3.30.565.10 336 553 3.2E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS26730 ebcd204c92455d30b34e0bd35ab67082 399 SUPERFAMILY SSF103473 11 392 1.7E-54 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS26730 ebcd204c92455d30b34e0bd35ab67082 399 Pfam PF07690 Major Facilitator Superfamily 24 355 1.7E-29 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS26730 ebcd204c92455d30b34e0bd35ab67082 399 Gene3D G3DSA:1.20.1250.20 205 399 2.6E-14 T 29-03-2018 CKQ55_RS26730 ebcd204c92455d30b34e0bd35ab67082 399 Gene3D G3DSA:1.20.1250.20 12 202 1.5E-25 T 29-03-2018 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SMART SM00958 228 358 1.2E-82 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SUPERFAMILY SSF52540 416 618 1.27E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SUPERFAMILY SSF81767 227 368 1.44E-43 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Gene3D G3DSA:3.40.50.300 9 265 1.1E-56 T 29-03-2018 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Gene3D G3DSA:3.40.50.300 302 416 5.3E-8 T 29-03-2018 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Gene3D G3DSA:3.10.450.50 734 901 1.8E-56 T 29-03-2018 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.899 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 7.0E-70 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Pfam PF07517 SecA DEAD-like domain 7 402 3.8E-131 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Pfam PF02810 SEC-C motif 881 899 1.1E-10 T 29-03-2018 IPR004027 SEC-C motif CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Gene3D G3DSA:1.10.3060.10 635 733 1.9E-30 T 29-03-2018 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Gene3D G3DSA:3.40.50.300 417 634 4.2E-53 T 29-03-2018 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 170 190 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 376 393 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 63 87 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 101 115 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 339 361 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 117 127 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 PRINTS PR00906 SecA protein signature 413 426 1.2E-73 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SMART SM00957 6 402 0.0 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SUPERFAMILY SSF81886 620 840 4.05E-86 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SUPERFAMILY SSF81886 877 889 4.05E-86 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SUPERFAMILY SSF52540 368 415 2.03E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 SUPERFAMILY SSF52540 5 228 2.03E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08095 8c9803ace44efe8c33564a50e22e31c8 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 8.6E-40 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CKQ55_RS15705 8613a540f4f567f418824ecfe91988a3 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.223 T 29-03-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 CKQ55_RS15705 8613a540f4f567f418824ecfe91988a3 655 Pfam PF04632 Fusaric acid resistance protein family 11 652 5.9E-154 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CKQ55_RS15950 fda9176dec3b5e8fb3204d8a1511f3b4 270 SMART SM00382 33 229 7.8E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS15950 fda9176dec3b5e8fb3204d8a1511f3b4 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS15950 fda9176dec3b5e8fb3204d8a1511f3b4 270 Gene3D G3DSA:3.40.50.300 5 262 1.9E-60 T 29-03-2018 CKQ55_RS15950 fda9176dec3b5e8fb3204d8a1511f3b4 270 SUPERFAMILY SSF52540 8 236 2.38E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15950 fda9176dec3b5e8fb3204d8a1511f3b4 270 Pfam PF00005 ABC transporter 25 172 1.2E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS09035 4efc7986b821b984be600771017135f2 494 Pfam PF00474 Sodium:solute symporter family 34 419 2.9E-42 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS31225 a64f1c48af6dff53efc5bff13ad3d04f 181 Pfam PF13091 PLD-like domain 46 171 1.3E-26 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS31225 a64f1c48af6dff53efc5bff13ad3d04f 181 Gene3D G3DSA:3.30.870.10 27 181 1.8E-29 T 29-03-2018 CKQ55_RS31225 a64f1c48af6dff53efc5bff13ad3d04f 181 SUPERFAMILY SSF56024 31 176 9.2E-37 T 29-03-2018 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 SUPERFAMILY SSF56796 9 381 5.5E-120 T 29-03-2018 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 3 379 9.1E-191 T 29-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 375 1.2E-113 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 Gene3D G3DSA:3.40.50.1970 9 184 2.0E-44 T 29-03-2018 CKQ55_RS18920 aefb82d95d4e7632484c5389bf41702a 383 Gene3D G3DSA:1.20.1090.10 186 383 1.3E-60 T 29-03-2018 CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 SMART SM00267 163 334 1.3E-45 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 329 8.6E-41 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 SUPERFAMILY SSF55781 18 166 1.2E-16 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 SUPERFAMILY SSF55073 179 332 2.51E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 Gene3D G3DSA:3.30.70.270 164 335 5.7E-49 T 29-03-2018 CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 331 2.3E-39 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 Pfam PF13185 GAF domain 17 154 3.0E-10 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 Gene3D G3DSA:3.30.450.40 5 163 8.1E-19 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS29975 7f877448bb55f454f9025e75a5b45ce1 337 SMART SM00065 18 164 4.6E-6 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 Gene3D G3DSA:3.40.190.10 90 178 1.5E-9 T 29-03-2018 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 SUPERFAMILY SSF46785 6 90 1.32E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 Pfam PF03466 LysR substrate binding domain 92 295 2.6E-29 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 Gene3D G3DSA:1.10.10.10 5 89 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 Gene3D G3DSA:3.40.190.10 179 269 8.0E-19 T 29-03-2018 CKQ55_RS23120 c9e5ea76cf76135055c5ce8e95789aa3 304 SUPERFAMILY SSF53850 93 299 1.47E-33 T 29-03-2018 CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 Pfam PF00248 Aldo/keto reductase family 19 286 2.5E-47 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 PRINTS PR00069 Aldo-keto reductase signature 49 73 2.9E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 PRINTS PR00069 Aldo-keto reductase signature 220 244 2.9E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 PRINTS PR00069 Aldo-keto reductase signature 150 167 2.9E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.9E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 SUPERFAMILY SSF51430 14 286 4.98E-63 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17875 4a24304f21c4bb321b972154289925cb 290 Gene3D G3DSA:3.20.20.100 10 290 2.4E-60 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 Gene3D G3DSA:2.40.50.140 292 342 2.4E-10 T 29-03-2018 CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 Pfam PF08402 TOBE domain 280 350 9.8E-10 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 SUPERFAMILY SSF50331 236 358 4.82E-24 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 SMART SM00382 28 211 9.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 Pfam PF00005 ABC transporter 20 161 6.0E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 SUPERFAMILY SSF52540 4 241 7.14E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 Gene3D G3DSA:2.40.50.100 241 291 4.6E-6 T 29-03-2018 CKQ55_RS24020 284d3c0ff0931de0fc8b490d02b9d79a 364 Gene3D G3DSA:3.40.50.300 2 240 2.1E-71 T 29-03-2018 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 SUPERFAMILY SSF68923 11 226 1.66E-82 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 SUPERFAMILY SSF53795 228 539 6.64E-121 T 29-03-2018 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 Gene3D G3DSA:3.90.228.20 227 306 3.9E-27 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 Gene3D G3DSA:3.90.228.20 307 537 1.1E-84 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 3.3E-201 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 PIRSF PIRSF006294 2 539 3.6E-220 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 8 538 7.5E-250 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 52.929 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS24245 69faa21b19b343c83eb76529e73a97d3 546 Gene3D G3DSA:3.40.449.10 22 226 2.1E-71 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS20065 f89a4d44b8f632249bef289d01b71fcb 398 SUPERFAMILY SSF53067 84 352 3.68E-38 T 29-03-2018 CKQ55_RS20065 f89a4d44b8f632249bef289d01b71fcb 398 Pfam PF00480 ROK family 89 351 9.6E-34 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS20065 f89a4d44b8f632249bef289d01b71fcb 398 Gene3D G3DSA:1.10.10.10 9 73 1.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20065 f89a4d44b8f632249bef289d01b71fcb 398 SUPERFAMILY SSF46785 11 62 2.27E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20065 f89a4d44b8f632249bef289d01b71fcb 398 Gene3D G3DSA:3.30.420.40 202 398 7.0E-35 T 29-03-2018 CKQ55_RS20065 f89a4d44b8f632249bef289d01b71fcb 398 Gene3D G3DSA:3.30.420.40 74 201 3.0E-14 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 SMART SM00642 15 414 8.4E-156 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Gene3D G3DSA:3.20.20.80 2 121 7.8E-47 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Gene3D G3DSA:3.20.20.470 171 337 3.1E-37 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 548 1.2E-258 T 29-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 7.4E-9 T 29-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 6.4E-126 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Gene3D G3DSA:2.60.40.1180 476 551 2.8E-19 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 SUPERFAMILY SSF51011 475 549 2.38E-17 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Gene3D G3DSA:3.20.20.80 338 475 3.0E-22 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 Gene3D G3DSA:3.90.400.10 122 170 4.3E-27 T 29-03-2018 CKQ55_RS10100 d1a459ba781b22097627504626d8e07e 551 SUPERFAMILY SSF51445 5 472 1.28E-150 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS14530 15eec8107b19683e56638d25384368a1 256 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 6 254 1.3E-120 T 29-03-2018 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 CKQ55_RS14530 15eec8107b19683e56638d25384368a1 256 Gene3D G3DSA:3.40.50.300 1 242 6.4E-66 T 29-03-2018 CKQ55_RS14530 15eec8107b19683e56638d25384368a1 256 SUPERFAMILY SSF52540 3 229 2.13E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14530 15eec8107b19683e56638d25384368a1 256 SMART SM00382 28 219 1.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14530 15eec8107b19683e56638d25384368a1 256 Pfam PF00005 ABC transporter 19 170 3.0E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14530 15eec8107b19683e56638d25384368a1 256 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS31580 1bc9fa2511c81d75fbcba81e72784d71 317 Pfam PF03432 Relaxase/Mobilisation nuclease domain 90 234 3.7E-10 T 29-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Gene3D G3DSA:1.10.4030.10 21 148 5.0E-26 T 29-03-2018 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Pfam PF13616 PPIC-type PPIASE domain 283 383 5.3E-26 T 29-03-2018 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.451 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Pfam PF00639 PPIC-type PPIASE domain 178 271 5.9E-22 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Gene3D G3DSA:3.10.50.40 163 278 2.5E-24 T 29-03-2018 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Pfam PF09312 SurA N-terminal domain 25 142 2.0E-46 T 29-03-2018 IPR015391 SurA N-terminal CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 SUPERFAMILY SSF109998 25 201 1.47E-45 T 29-03-2018 IPR027304 Trigger factor/SurA domain CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 Gene3D G3DSA:3.10.50.40 279 386 2.5E-32 T 29-03-2018 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 SUPERFAMILY SSF54534 173 276 2.49E-28 T 29-03-2018 CKQ55_RS08365 5526ef184350406a96a28bb9be778635 428 SUPERFAMILY SSF54534 283 385 2.35E-33 T 29-03-2018 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.4E-21 T 29-03-2018 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 141 3.1E-18 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 Gene3D G3DSA:1.10.10.10 1 52 3.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 SMART SM00344 1 110 5.0E-47 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 Gene3D G3DSA:3.30.70.920 54 146 1.8E-21 T 29-03-2018 CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 SUPERFAMILY SSF54909 61 150 4.69E-18 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS17805 c498220402984a1dd5fd7d0783e35e27 153 SUPERFAMILY SSF46785 1 61 9.73E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17580 15349e4d0d58201066885c088b1c90d3 194 SUPERFAMILY SSF52218 39 152 2.1E-18 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS17580 15349e4d0d58201066885c088b1c90d3 194 Gene3D G3DSA:3.40.50.360 35 190 8.8E-34 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS17580 15349e4d0d58201066885c088b1c90d3 194 Pfam PF12682 Flavodoxin 40 192 1.2E-25 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 SUPERFAMILY SSF56601 422 610 2.82E-110 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 SUPERFAMILY SSF56601 211 233 2.82E-110 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 SUPERFAMILY SSF56601 262 313 2.82E-110 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 SUPERFAMILY SSF56601 673 832 2.82E-110 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 2.9E-30 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 Gene3D G3DSA:3.40.710.10 410 800 2.3E-92 T 29-03-2018 CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 Pfam PF00912 Transglycosylase 55 229 4.0E-65 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 603 8.5E-24 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 Gene3D G3DSA:2.40.50.140 348 409 5.4E-22 T 29-03-2018 CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 Gene3D G3DSA:1.10.3810.10 47 246 9.6E-84 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 SUPERFAMILY SSF53955 43 256 5.91E-80 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS15025 11286af2e98e5f8cfae98aeedbbc6ab8 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 787 2.2E-174 T 29-03-2018 CKQ55_RS19265 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CKQ55_RS19265 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CKQ55_RS19265 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CKQ55_RS19265 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CKQ55_RS19265 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CKQ55_RS12270 0b1976ccc14385c34e02989ef776399c 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 1.0E-47 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CKQ55_RS12270 0b1976ccc14385c34e02989ef776399c 105 Gene3D G3DSA:1.10.140.10 3 103 1.8E-59 T 29-03-2018 IPR023453 Methionine repressor MetJ domain CKQ55_RS12270 0b1976ccc14385c34e02989ef776399c 105 Hamap MF_00744 Met repressor [metJ]. 1 105 41.385 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CKQ55_RS12270 0b1976ccc14385c34e02989ef776399c 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.3E-59 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CKQ55_RS12270 0b1976ccc14385c34e02989ef776399c 105 SUPERFAMILY SSF47598 2 105 2.67E-58 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS01115 5d099c30662d375112130606751d1f5a 164 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 5 159 3.7E-82 T 29-03-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 CKQ55_RS01115 5d099c30662d375112130606751d1f5a 164 Gene3D G3DSA:2.30.110.10 2 159 2.4E-38 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS01115 5d099c30662d375112130606751d1f5a 164 SMART SM00903 13 158 5.5E-52 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS01115 5d099c30662d375112130606751d1f5a 164 Pfam PF01613 Flavin reductase like domain 13 159 1.4E-29 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS01115 5d099c30662d375112130606751d1f5a 164 SUPERFAMILY SSF50475 2 161 1.91E-45 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS01115 5d099c30662d375112130606751d1f5a 164 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 164 43.066 T 29-03-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 4.5E-66 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 464 6.5E-169 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 Gene3D G3DSA:3.50.50.60 1 161 3.0E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 1.2E-71 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 Gene3D G3DSA:3.30.390.30 344 465 6.6E-37 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 Gene3D G3DSA:3.40.50.720 162 335 2.9E-35 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PIRSF PIRSF000350 1 459 3.0E-83 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 SUPERFAMILY SSF51905 2 335 7.52E-66 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 1.2E-33 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 SUPERFAMILY SSF55424 342 464 4.47E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.3E-38 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 5.3E-38 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.3E-38 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-38 T 29-03-2018 CKQ55_RS27300 4f5d8b5c46c6395c1f9181682a459140 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.3E-38 T 29-03-2018 CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Gene3D G3DSA:3.40.50.300 2 225 7.6E-60 T 29-03-2018 CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 SMART SM00487 25 223 3.2E-64 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 SMART SM00490 259 340 1.1E-31 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 567 47.254 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Gene3D G3DSA:3.40.50.300 226 408 2.0E-42 T 29-03-2018 CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Pfam PF00270 DEAD/DEAH box helicase 31 195 3.4E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Pfam PF03880 DbpA RNA binding domain 496 565 3.5E-20 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 SUPERFAMILY SSF52540 75 361 1.78E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Pfam PF12343 Cold shock protein DEAD box A 583 653 8.1E-12 T 29-03-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 CKQ55_RS16125 0dab842d904f7537f7fb662079be924b 653 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.2E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS30750 d398bf831700dc4e286192381251021a 666 Pfam PF02195 ParB-like nuclease domain 37 132 3.1E-14 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS30750 d398bf831700dc4e286192381251021a 666 SUPERFAMILY SSF110849 36 135 7.32E-15 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS30750 d398bf831700dc4e286192381251021a 666 Gene3D G3DSA:1.10.10.730 134 180 5.8E-8 T 29-03-2018 CKQ55_RS30750 d398bf831700dc4e286192381251021a 666 SUPERFAMILY SSF109709 126 220 6.41E-18 T 29-03-2018 CKQ55_RS30750 d398bf831700dc4e286192381251021a 666 SMART SM00470 37 133 8.2E-20 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CKQ55_RS30750 d398bf831700dc4e286192381251021a 666 Gene3D G3DSA:3.90.1530.10 25 133 5.6E-20 T 29-03-2018 CKQ55_RS06690 d19e5875885368667e8ca795951c3d63 431 SUPERFAMILY SSF103473 8 417 9.81E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06690 d19e5875885368667e8ca795951c3d63 431 Pfam PF07690 Major Facilitator Superfamily 23 383 4.8E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS06690 d19e5875885368667e8ca795951c3d63 431 Gene3D G3DSA:1.20.1250.20 226 429 1.2E-23 T 29-03-2018 CKQ55_RS06690 d19e5875885368667e8ca795951c3d63 431 Gene3D G3DSA:1.20.1250.20 6 203 2.1E-31 T 29-03-2018 CKQ55_RS06690 d19e5875885368667e8ca795951c3d63 431 PIRSF PIRSF002808 2 430 9.2E-119 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 2.1E-81 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 Gene3D G3DSA:3.30.70.660 114 251 4.1E-38 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 Pfam PF01416 tRNA pseudouridine synthase 17 111 2.8E-9 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 5.2E-29 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 Gene3D G3DSA:3.30.70.580 8 113 4.6E-36 T 29-03-2018 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 PIRSF PIRSF001430 9 260 5.1E-78 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 SUPERFAMILY SSF55120 9 265 5.32E-94 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20925 e4873b6732e0a373876fe5a9f993a69a 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.958 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS05175 87741596a607faf71cc1353213508e83 288 Gene3D G3DSA:3.40.630.30 13 137 1.8E-12 T 29-03-2018 CKQ55_RS05175 87741596a607faf71cc1353213508e83 288 SUPERFAMILY SSF55729 17 239 1.61E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS05175 87741596a607faf71cc1353213508e83 288 Pfam PF13527 Acetyltransferase (GNAT) domain 30 129 3.4E-12 T 29-03-2018 CKQ55_RS06860 b6547195db11951793811a126d512c45 265 SUPERFAMILY SSF46689 209 255 5.38E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS06860 b6547195db11951793811a126d512c45 265 SMART SM00342 170 252 2.4E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS06860 b6547195db11951793811a126d512c45 265 Gene3D G3DSA:2.60.120.10 4 96 1.4E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS06860 b6547195db11951793811a126d512c45 265 SUPERFAMILY SSF51182 16 179 7.91E-16 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS06860 b6547195db11951793811a126d512c45 265 Pfam PF02311 AraC-like ligand binding domain 23 120 1.1E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS06860 b6547195db11951793811a126d512c45 265 Gene3D G3DSA:1.10.10.60 97 206 2.6E-7 T 29-03-2018 CKQ55_RS06860 b6547195db11951793811a126d512c45 265 Gene3D G3DSA:1.10.10.60 208 262 4.9E-9 T 29-03-2018 CKQ55_RS06860 b6547195db11951793811a126d512c45 265 Pfam PF12833 Helix-turn-helix domain 176 253 9.3E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 SMART SM01134 76 237 9.3E-58 T 29-03-2018 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 SMART SM00420 11 63 2.7E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 Gene3D G3DSA:3.40.50.1360 68 242 5.7E-33 T 29-03-2018 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 4.8E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 4.8E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 SUPERFAMILY SSF46785 10 64 1.62E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 SUPERFAMILY SSF100950 78 235 5.55E-22 T 29-03-2018 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 Pfam PF00455 DeoR C terminal sensor domain 78 235 2.8E-41 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 Gene3D G3DSA:1.10.10.10 7 63 2.0E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 Pfam PF08220 DeoR-like helix-turn-helix domain 11 63 5.1E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS25450 f60165cf9a19c4c0320fb9a9313a71e3 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 211 1.3E-84 T 29-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 PIRSF PIRSF015592 1 212 7.3E-82 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.9E-48 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 5.9E-48 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.9E-48 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.9E-48 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.9E-48 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 39.749 T 29-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 29-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 29-03-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 Pfam PF01470 Pyroglutamyl peptidase 4 202 2.2E-79 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 SUPERFAMILY SSF53182 3 213 6.02E-72 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CKQ55_RS03770 3e5236cf06f370b1b0cd1a7658f3e8e6 214 Gene3D G3DSA:3.40.630.20 2 214 4.7E-65 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 3.2E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 SUPERFAMILY SSF46785 11 87 9.24E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 Gene3D G3DSA:1.20.120.530 80 238 4.3E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 Pfam PF07840 FadR C-terminal domain 72 234 1.2E-73 T 29-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 5.2E-123 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 Gene3D G3DSA:1.10.10.10 1 79 6.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 SUPERFAMILY SSF48008 79 230 4.84E-65 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 SMART SM00345 12 71 5.4E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS24110 c288f0e2e1ec2b07f7d9edd1b5db0532 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 163.276 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CKQ55_RS10285 8350ac2e6043b58224adc5cc491ab39b 577 Pfam PF17243 POTRA domain TamA domain 1 26 100 1.7E-21 T 29-03-2018 IPR035243 TamA, POTRA domain 1 CKQ55_RS10285 8350ac2e6043b58224adc5cc491ab39b 577 Pfam PF07244 Surface antigen variable number repeat 189 246 2.2E-9 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS10285 8350ac2e6043b58224adc5cc491ab39b 577 Pfam PF01103 Surface antigen 281 574 5.9E-34 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CKQ55_RS10285 8350ac2e6043b58224adc5cc491ab39b 577 Gene3D G3DSA:3.10.20.310 102 188 8.9E-11 T 29-03-2018 CKQ55_RS10285 8350ac2e6043b58224adc5cc491ab39b 577 Gene3D G3DSA:2.40.160.50 220 576 2.2E-59 T 29-03-2018 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 Gene3D G3DSA:3.40.630.10 1 267 4.4E-61 T 29-03-2018 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 Gene3D G3DSA:3.40.630.10 268 374 2.5E-9 T 29-03-2018 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.494 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 Pfam PF07687 Peptidase dimerisation domain 175 281 1.1E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 SUPERFAMILY SSF55031 179 287 1.64E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 2.6E-173 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 5.7E-44 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 SUPERFAMILY SSF53187 292 373 2.88E-63 T 29-03-2018 CKQ55_RS20420 17803f0c3968207980dfdf3d32eb6adf 375 SUPERFAMILY SSF53187 5 178 2.88E-63 T 29-03-2018 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 Gene3D G3DSA:3.30.70.260 328 409 2.2E-17 T 29-03-2018 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 Gene3D G3DSA:3.40.50.720 136 295 3.4E-43 T 29-03-2018 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 SUPERFAMILY SSF55021 328 409 6.87E-20 T 29-03-2018 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 SUPERFAMILY SSF51735 108 295 3.71E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 SUPERFAMILY SSF52283 7 138 6.38E-50 T 29-03-2018 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 Gene3D G3DSA:3.40.50.720 1 135 5.8E-41 T 29-03-2018 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 5.1E-37 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 Pfam PF01842 ACT domain 345 401 2.4E-7 T 29-03-2018 IPR002912 ACT domain CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 6.9E-52 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS17315 9c5ece9e3756895132b5e550fbcdb8c9 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 Pfam PF01965 DJ-1/PfpI family 19 187 2.8E-16 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 Pfam PF12833 Helix-turn-helix domain 249 327 4.2E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 Gene3D G3DSA:1.10.10.60 223 280 9.3E-11 T 29-03-2018 CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 SUPERFAMILY SSF52317 18 208 3.8E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 SUPERFAMILY SSF46689 226 277 8.51E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 Gene3D G3DSA:1.10.10.60 281 331 2.2E-13 T 29-03-2018 CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 SMART SM00342 243 326 3.4E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 Gene3D G3DSA:3.40.50.880 14 222 2.7E-52 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS26365 132e075c265b806b713e8a2726c9802b 336 SUPERFAMILY SSF46689 280 329 1.48E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01335 f33eea0195428a9beb45a9c3eea43181 247 Gene3D G3DSA:3.40.50.1860 108 205 3.1E-13 T 29-03-2018 CKQ55_RS01335 f33eea0195428a9beb45a9c3eea43181 247 SUPERFAMILY SSF53681 156 213 1.18E-5 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS01335 f33eea0195428a9beb45a9c3eea43181 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 211 4.4E-12 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS01335 f33eea0195428a9beb45a9c3eea43181 247 Gene3D G3DSA:3.40.50.1860 6 107 3.2E-5 T 29-03-2018 CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 Gene3D G3DSA:3.30.70.270 313 445 1.0E-4 T 29-03-2018 CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 Pfam PF00563 EAL domain 498 730 1.6E-63 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 SUPERFAMILY SSF141868 497 737 4.32E-71 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 SMART SM00267 319 480 6.5E-6 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 SMART SM00052 492 735 9.5E-86 T 29-03-2018 IPR001633 EAL domain CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 Pfam PF05231 MASE1 15 320 1.0E-37 T 29-03-2018 IPR007895 MASE1 CKQ55_RS20285 560fa602c5bc58117dee6c594de2ce9a 739 Gene3D G3DSA:3.20.20.450 483 738 4.0E-71 T 29-03-2018 IPR001633 EAL domain CKQ55_RS24990 dc6b0e8a061b192b180af3ad53ad9d95 246 Gene3D G3DSA:3.40.190.10 78 203 8.0E-13 T 29-03-2018 CKQ55_RS24990 dc6b0e8a061b192b180af3ad53ad9d95 246 Gene3D G3DSA:3.40.190.10 4 77 1.4E-6 T 29-03-2018 CKQ55_RS24990 dc6b0e8a061b192b180af3ad53ad9d95 246 Pfam PF13531 Bacterial extracellular solute-binding protein 5 239 5.6E-39 T 29-03-2018 CKQ55_RS24990 dc6b0e8a061b192b180af3ad53ad9d95 246 SUPERFAMILY SSF53850 4 241 1.09E-33 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 29-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Gene3D G3DSA:3.40.50.740 108 213 0.0027 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Gene3D G3DSA:3.30.2070.10 794 834 1.6E-4 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Gene3D G3DSA:3.40.228.10 225 659 1.9E-102 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 831 2.4E-169 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Gene3D G3DSA:2.40.40.20 1047 1237 1.0E-46 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 SUPERFAMILY SSF53706 5 1069 0.0 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Gene3D G3DSA:4.10.1200.10 1 26 1.3E-14 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 2.5E-16 T 29-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 29-03-2018 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 SMART SM00926 43 105 6.6E-8 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 SUPERFAMILY SSF50692 1082 1234 4.52E-46 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 1.4E-20 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS27750 b0f4e5c556549deba8dde077256998e1 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS10115 fd4880f1b4d09a9ae5a1274a872bb722 102 SUPERFAMILY SSF52794 2 101 1.57E-32 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS10115 fd4880f1b4d09a9ae5a1274a872bb722 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 9.0E-21 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS10115 fd4880f1b4d09a9ae5a1274a872bb722 102 Gene3D G3DSA:3.40.50.2300 3 102 1.4E-35 T 29-03-2018 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 SUPERFAMILY SSF46589 1 112 8.89E-33 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.997 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 SUPERFAMILY SSF55681 116 424 2.07E-100 T 29-03-2018 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.1E-33 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 3.1E-184 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 6.5E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 6.5E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 6.5E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 6.5E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 6.5E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 Gene3D G3DSA:3.30.930.10 105 430 3.1E-98 T 29-03-2018 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 1.3E-36 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 Gene3D G3DSA:1.10.287.40 2 104 1.4E-26 T 29-03-2018 CKQ55_RS02200 58f24fc9bce8a7f92b9e498cda37d2a9 430 PIRSF PIRSF001529 1 430 9.6E-187 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CKQ55_RS25085 05c46820f440dfd071e516a04a8b51e8 324 Gene3D G3DSA:3.40.190.10 24 127 2.3E-14 T 29-03-2018 CKQ55_RS25085 05c46820f440dfd071e516a04a8b51e8 324 Pfam PF09084 NMT1/THI5 like 68 187 3.7E-16 T 29-03-2018 IPR015168 SsuA/THI5-like CKQ55_RS25085 05c46820f440dfd071e516a04a8b51e8 324 SUPERFAMILY SSF53850 28 231 5.88E-43 T 29-03-2018 CKQ55_RS25085 05c46820f440dfd071e516a04a8b51e8 324 SMART SM00062 29 254 2.3E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS25085 05c46820f440dfd071e516a04a8b51e8 324 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 311 3.2E-60 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CKQ55_RS25085 05c46820f440dfd071e516a04a8b51e8 324 Gene3D G3DSA:3.40.190.10 128 315 5.3E-31 T 29-03-2018 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 1.9E-31 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Gene3D G3DSA:1.10.287.730 146 172 9.2E-15 T 29-03-2018 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 426 3.8E-77 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 SUPERFAMILY SSF48013 6 149 4.19E-36 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Gene3D G3DSA:3.30.70.1170 173 230 6.0E-16 T 29-03-2018 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Pfam PF01029 NusB family 6 127 1.3E-26 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 72.463 T 29-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Gene3D G3DSA:1.10.940.10 1 145 1.8E-33 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 8.5E-187 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 Gene3D G3DSA:3.40.50.150 231 429 3.2E-53 T 29-03-2018 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS15475 950c210b3d67f61e641a9b4809b2a037 429 SUPERFAMILY SSF53335 139 429 3.04E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 Gene3D G3DSA:1.10.10.10 12 86 6.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 SMART SM00345 25 84 1.7E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 Pfam PF07702 UTRA domain 106 237 4.8E-24 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 1.8E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 9.7E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 9.7E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 SUPERFAMILY SSF64288 72 244 6.91E-32 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 Gene3D G3DSA:3.40.1410.10 91 246 6.5E-29 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 SMART SM00866 102 238 3.4E-19 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS12015 f8eb81ec92a29e5fdc4d1e70b220b187 246 SUPERFAMILY SSF46785 16 85 6.62E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21235 cc2be1e0d032769df438372af7f0eb05 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 251 33.46 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CKQ55_RS21235 cc2be1e0d032769df438372af7f0eb05 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 7.3E-78 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CKQ55_RS21235 cc2be1e0d032769df438372af7f0eb05 252 Gene3D G3DSA:3.40.50.1820 1 252 1.6E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS21235 cc2be1e0d032769df438372af7f0eb05 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 6.0E-17 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS21235 cc2be1e0d032769df438372af7f0eb05 252 SUPERFAMILY SSF53474 2 251 9.56E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 Gene3D G3DSA:3.30.700.10 22 137 5.8E-30 T 29-03-2018 CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 SUPERFAMILY SSF54523 34 139 9.42E-38 T 29-03-2018 CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 Pfam PF08334 Type II secretion system (T2SS), protein G 31 137 3.1E-37 T 29-03-2018 IPR013545 Type II secretion system protein G CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 1.6E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 137 2.1E-57 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 3.6E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 3.6E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04825 288ed54675b2ff3bd1c182e7f3b37bb8 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.3E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 Pfam PF01175 Urocanase Rossmann-like domain 140 348 3.2E-85 T 29-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 Gene3D G3DSA:3.40.1770.10 9 151 3.4E-29 T 29-03-2018 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 Gene3D G3DSA:3.40.1770.10 195 554 1.6E-163 T 29-03-2018 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 TIGRFAM TIGR01228 hutU: urocanate hydratase 10 553 3.4E-301 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 PIRSF PIRSF001423 1 560 1.1E-293 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 Pfam PF17392 Urocanase C-terminal domain 351 545 1.3E-92 T 29-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 SUPERFAMILY SSF111326 7 554 4.71E-260 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 Pfam PF17391 Urocanase N-terminal domain 11 137 2.4E-62 T 29-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 29-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03375 5f65bc99ecb4c0765f6078c3c0803ff8 562 Hamap MF_00577 Urocanate hydratase [hutU]. 2 555 49.766 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS16785 36474beb996ddfd31610f909d393f89f 386 SUPERFAMILY SSF56059 1 168 1.7E-91 T 29-03-2018 CKQ55_RS16785 36474beb996ddfd31610f909d393f89f 386 SUPERFAMILY SSF56059 266 383 1.7E-91 T 29-03-2018 CKQ55_RS16785 36474beb996ddfd31610f909d393f89f 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 7.6E-159 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CKQ55_RS16785 36474beb996ddfd31610f909d393f89f 386 SUPERFAMILY SSF52440 174 279 9.21E-41 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 SMART SM01086 317 412 6.1E-36 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 29-03-2018 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.411 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 SMART SM00994 12 51 1.0E-24 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 Gene3D G3DSA:1.10.8.60 317 409 1.9E-33 T 29-03-2018 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 3.9E-17 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 SMART SM00382 111 264 1.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 1.2E-48 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 Gene3D G3DSA:3.40.50.300 56 315 5.0E-68 T 29-03-2018 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 2.2E-214 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CKQ55_RS06195 0ba08c18c706777f1d1d84534f68a4af 424 SUPERFAMILY SSF52540 64 402 3.48E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05600 f61f422ae590cecad4b5a16d94d7d94b 242 SUPERFAMILY SSF46785 14 70 3.22E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05600 f61f422ae590cecad4b5a16d94d7d94b 242 Gene3D G3DSA:1.10.10.10 12 74 1.5E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05600 f61f422ae590cecad4b5a16d94d7d94b 242 Pfam PF13730 Helix-turn-helix domain 18 65 1.0E-11 T 29-03-2018 CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 Gene3D G3DSA:3.10.580.10 332 455 7.7E-21 T 29-03-2018 CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 Pfam PF00571 CBS domain 399 448 6.0E-5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 Pfam PF00571 CBS domain 344 388 6.2E-9 T 29-03-2018 IPR000644 CBS domain CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 SUPERFAMILY SSF54631 343 453 4.17E-20 T 29-03-2018 CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 301 2.3E-63 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 Gene3D G3DSA:3.40.50.1100 40 140 2.1E-37 T 29-03-2018 CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 SUPERFAMILY SSF53686 3 320 1.7E-95 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 SMART SM00116 342 389 2.3E-6 T 29-03-2018 IPR000644 CBS domain CKQ55_RS16990 fcc4df6c07235bdec0e634e443dfb005 456 Gene3D G3DSA:3.40.50.1100 141 322 2.9E-53 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.666 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 PRINTS PR01100 Shikimate kinase family signature 57 65 1.1E-24 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 PRINTS PR01100 Shikimate kinase family signature 74 83 1.1E-24 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 PRINTS PR01100 Shikimate kinase family signature 29 42 1.1E-24 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 PRINTS PR01100 Shikimate kinase family signature 5 20 1.1E-24 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 PRINTS PR01100 Shikimate kinase family signature 95 112 1.1E-24 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 Gene3D G3DSA:3.40.50.300 1 172 3.0E-30 T 29-03-2018 CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 SUPERFAMILY SSF52540 3 167 1.4E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06550 093c0aaae521b19e4e18ad7144d4c5f8 175 Pfam PF01202 Shikimate kinase 11 168 3.7E-46 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS29755 b0969e0d5975177a5de7c60faa38e216 210 Pfam PF00005 ABC transporter 17 162 2.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29755 b0969e0d5975177a5de7c60faa38e216 210 Gene3D G3DSA:3.40.50.300 1 207 6.1E-47 T 29-03-2018 CKQ55_RS29755 b0969e0d5975177a5de7c60faa38e216 210 SMART SM00382 26 204 0.0022 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29755 b0969e0d5975177a5de7c60faa38e216 210 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS29755 b0969e0d5975177a5de7c60faa38e216 210 SUPERFAMILY SSF52540 1 196 1.91E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31050 d6ffcd6ee7e1ddc2dda0fc179980e536 176 Pfam PF03230 Antirestriction protein 88 176 3.4E-19 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS31050 d6ffcd6ee7e1ddc2dda0fc179980e536 176 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 60 176 7.0E-14 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS13115 bb1cd1d8a8050adaf39778f9db0949d4 205 SUPERFAMILY SSF51569 2 204 4.58E-59 T 29-03-2018 CKQ55_RS13115 bb1cd1d8a8050adaf39778f9db0949d4 205 Pfam PF01081 KDPG and KHG aldolase 6 183 3.7E-29 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS13115 bb1cd1d8a8050adaf39778f9db0949d4 205 Gene3D G3DSA:3.20.20.70 1 205 3.8E-46 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 SMART SM01230 133 390 2.8E-96 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 Gene3D G3DSA:3.10.20.70 22 132 2.4E-15 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 SUPERFAMILY SSF55931 134 469 1.96E-96 T 29-03-2018 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 Gene3D G3DSA:3.30.590.10 133 472 1.8E-89 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 SUPERFAMILY SSF54368 31 132 2.09E-9 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS01165 9201b97faf33b3d3ca72bee2d2743316 472 Pfam PF00120 Glutamine synthetase, catalytic domain 134 467 1.4E-102 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF81665 614 660 3.01E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF81665 30 103 3.01E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF81665 208 299 3.01E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 Gene3D G3DSA:2.70.150.10 17 208 5.1E-24 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF81653 115 207 1.96E-21 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF81660 316 450 2.58E-36 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 338 1.1E-37 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 3.0E-49 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.463 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 Gene3D G3DSA:3.40.1110.10 316 442 7.3E-25 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 8.1E-36 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF56784 293 317 8.93E-39 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF56784 377 404 8.93E-39 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 SUPERFAMILY SSF56784 435 559 8.93E-39 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 Gene3D G3DSA:3.40.50.1000 443 577 6.4E-34 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 Pfam PF00122 E1-E2 ATPase 114 282 6.5E-34 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 29-03-2018 CKQ55_RS03830 1b7353cec8d16b7c68798ed6b1734098 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 29-03-2018 CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 Gene3D G3DSA:1.20.120.530 79 220 5.2E-27 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 SMART SM00895 86 206 3.9E-20 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 Gene3D G3DSA:1.10.10.10 7 78 8.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 SUPERFAMILY SSF46785 13 80 3.33E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 SMART SM00345 18 76 2.5E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 SUPERFAMILY SSF48008 83 212 1.65E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.2E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15740 f5da5a27f4af94a3b5064274c4707495 221 Pfam PF07729 FCD domain 86 204 5.2E-22 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS19305 ccd043a6c50f5af7fd6542764220af12 142 Pfam PF09335 SNARE associated Golgi protein 25 132 1.8E-10 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS19305 ccd043a6c50f5af7fd6542764220af12 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 40 111 0.001 T 29-03-2018 IPR020143 Uncharacterised protein family, RP436 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 PRINTS PR00988 Uridine kinase signature 157 168 1.9E-38 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 PRINTS PR00988 Uridine kinase signature 8 25 1.9E-38 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 PRINTS PR00988 Uridine kinase signature 87 102 1.9E-38 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 PRINTS PR00988 Uridine kinase signature 143 153 1.9E-38 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 PRINTS PR00988 Uridine kinase signature 42 53 1.9E-38 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 PRINTS PR00988 Uridine kinase signature 179 192 1.9E-38 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 40.787 T 29-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 2.0E-94 T 29-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 2.4E-44 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 Gene3D G3DSA:3.40.50.300 4 213 4.2E-54 T 29-03-2018 CKQ55_RS22555 d64233ea815a9dc8ce3003893168f2c0 213 SUPERFAMILY SSF52540 6 205 2.7E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11335 92bba0bd213c00c839dd42eb35592972 410 Pfam PF00107 Zinc-binding dehydrogenase 188 325 1.3E-11 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS11335 92bba0bd213c00c839dd42eb35592972 410 Gene3D G3DSA:3.40.50.720 187 337 3.4E-5 T 29-03-2018 CKQ55_RS11335 92bba0bd213c00c839dd42eb35592972 410 Gene3D G3DSA:3.90.180.10 1 186 7.5E-23 T 29-03-2018 CKQ55_RS11335 92bba0bd213c00c839dd42eb35592972 410 SUPERFAMILY SSF51735 170 331 2.68E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11335 92bba0bd213c00c839dd42eb35592972 410 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 1.4E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS11335 92bba0bd213c00c839dd42eb35592972 410 SUPERFAMILY SSF50129 3 190 4.09E-25 T 29-03-2018 IPR011032 GroES-like CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 SUPERFAMILY SSF52540 258 484 9.07E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 Gene3D G3DSA:3.40.50.300 255 509 2.3E-39 T 29-03-2018 CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 Pfam PF00005 ABC transporter 21 171 1.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 Pfam PF00005 ABC transporter 278 433 2.4E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 8.2E-277 T 29-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 SUPERFAMILY SSF52540 3 229 1.36E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 Gene3D G3DSA:3.40.50.300 2 233 2.7E-51 T 29-03-2018 CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 SMART SM00382 29 219 1.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 SMART SM00382 286 482 4.8E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14015 afaa021eada84d2662ebc86ad5bae50b 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 SMART SM00866 86 225 4.3E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.1E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 Pfam PF07702 UTRA domain 87 224 7.9E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 Gene3D G3DSA:1.10.10.10 2 64 8.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 SUPERFAMILY SSF64288 53 232 3.3E-48 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 5.1E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 5.1E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 SMART SM00345 6 65 4.7E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 Gene3D G3DSA:3.40.1410.10 65 233 4.7E-40 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS13155 122d0dffac988881837e36a5f3d11868 248 SUPERFAMILY SSF46785 2 69 2.39E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 SUPERFAMILY SSF53850 86 284 8.07E-38 T 29-03-2018 CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.8E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 SUPERFAMILY SSF46785 1 108 7.71E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 Gene3D G3DSA:3.40.190.10 175 259 3.6E-15 T 29-03-2018 CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 Gene3D G3DSA:3.40.190.10 83 174 6.3E-18 T 29-03-2018 CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 Gene3D G3DSA:1.10.10.10 1 82 4.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26520 c9d18694f80a18425beadd5e04a69af6 292 Pfam PF03466 LysR substrate binding domain 85 284 9.2E-44 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS09050 a9db7060c85e89ba38a69808cbc07aae 404 Gene3D G3DSA:3.20.20.10 36 273 2.8E-38 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS09050 a9db7060c85e89ba38a69808cbc07aae 404 SMART SM01119 295 391 6.8E-34 T 29-03-2018 IPR026956 D-serine dehydratase-like domain CKQ55_RS09050 a9db7060c85e89ba38a69808cbc07aae 404 SUPERFAMILY SSF51419 36 273 1.5E-31 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS09050 a9db7060c85e89ba38a69808cbc07aae 404 Pfam PF01168 Alanine racemase, N-terminal domain 36 216 2.3E-15 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS09050 a9db7060c85e89ba38a69808cbc07aae 404 Pfam PF14031 Putative serine dehydratase domain 295 390 3.9E-14 T 29-03-2018 IPR026956 D-serine dehydratase-like domain CKQ55_RS27285 b61ce7ba7eb5ce9bf09e66577ba88472 320 SUPERFAMILY SSF52518 5 319 3.5E-89 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS27285 b61ce7ba7eb5ce9bf09e66577ba88472 320 Gene3D G3DSA:3.40.50.970 1 320 2.4E-77 T 29-03-2018 CKQ55_RS27285 b61ce7ba7eb5ce9bf09e66577ba88472 320 Pfam PF00676 Dehydrogenase E1 component 13 309 3.1E-81 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 28 76 3.9E-15 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 Gene3D G3DSA:3.40.30.10 94 237 2.8E-28 T 29-03-2018 CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 SUPERFAMILY SSF54423 24 81 1.06E-17 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 Gene3D G3DSA:3.10.450.70 19 79 3.0E-21 T 29-03-2018 CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 Pfam PF13098 Thioredoxin-like domain 105 227 1.5E-28 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS17460 1426f932bc4f0ebeacd38fc0848c6b38 237 SUPERFAMILY SSF52833 87 233 1.19E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 Gene3D G3DSA:3.50.50.60 147 296 1.4E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 Gene3D G3DSA:3.50.50.60 2 146 3.1E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 SUPERFAMILY SSF51905 2 290 6.11E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 8.1E-11 T 29-03-2018 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 8.1E-11 T 29-03-2018 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.1E-11 T 29-03-2018 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 1.1E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 4.1E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 258 276 4.1E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 4.1E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS06985 1ce9608990e2e9ad0e605e570840274f 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 4.1E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Gene3D G3DSA:3.30.559.10 385 629 4.6E-79 T 29-03-2018 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Pfam PF02817 e3 binding domain 326 361 2.1E-15 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 SUPERFAMILY SSF51230 105 196 1.96E-23 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 SUPERFAMILY SSF52777 387 628 3.34E-80 T 29-03-2018 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 SUPERFAMILY SSF51230 1 93 4.97E-23 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Gene3D G3DSA:4.10.320.10 319 379 1.1E-20 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 188 629 7.0E-229 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 SUPERFAMILY SSF47005 320 365 2.22E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 398 628 1.2E-79 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 SUPERFAMILY SSF51230 205 297 1.31E-23 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 228 257 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Gene3D G3DSA:2.40.50.100 247 318 5.6E-9 T 29-03-2018 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Gene3D G3DSA:3.90.1170.30 147 246 4.4E-22 T 29-03-2018 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Gene3D G3DSA:3.90.1170.30 1 43 2.8E-9 T 29-03-2018 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Gene3D G3DSA:3.90.1170.30 44 146 1.4E-22 T 29-03-2018 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Pfam PF00364 Biotin-requiring enzyme 4 73 4.8E-22 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Pfam PF00364 Biotin-requiring enzyme 206 276 6.9E-22 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS08010 c60eb4efb49392320abc27e588beba0e 629 Pfam PF00364 Biotin-requiring enzyme 106 176 4.7E-22 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 SUPERFAMILY SSF56801 15 555 4.45E-155 T 29-03-2018 CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 Pfam PF00501 AMP-binding enzyme 29 460 9.6E-115 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 Gene3D G3DSA:3.30.300.30 454 559 1.0E-26 T 29-03-2018 CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 Gene3D G3DSA:3.40.50.980 217 371 7.5E-38 T 29-03-2018 CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 Gene3D G3DSA:2.30.38.10 372 453 3.2E-30 T 29-03-2018 CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 9.4E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 Gene3D G3DSA:3.40.50.980 20 216 4.0E-44 T 29-03-2018 CKQ55_RS24055 3a5135b498cf85ffbdc276af8589e61f 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS18860 3c816347f23341b66ace4ecc4f72d0dd 386 Gene3D G3DSA:1.20.1600.10 24 325 2.8E-28 T 29-03-2018 CKQ55_RS18860 3c816347f23341b66ace4ecc4f72d0dd 386 SUPERFAMILY SSF111369 56 266 1.31E-20 T 29-03-2018 CKQ55_RS18860 3c816347f23341b66ace4ecc4f72d0dd 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 379 2.6E-40 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS18860 3c816347f23341b66ace4ecc4f72d0dd 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 268 1.7E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS03295 0b20470860a80277c99f84bc087af105 301 SUPERFAMILY SSF142338 11 294 2.49E-86 T 29-03-2018 CKQ55_RS03295 0b20470860a80277c99f84bc087af105 301 Hamap MF_00973 Gluconeogenesis factor. 8 299 32.313 T 29-03-2018 IPR010119 Gluconeogenesis factor CKQ55_RS03295 0b20470860a80277c99f84bc087af105 301 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 261 4.9E-99 T 29-03-2018 IPR010119 Gluconeogenesis factor CKQ55_RS03295 0b20470860a80277c99f84bc087af105 301 Pfam PF01933 Uncharacterised protein family UPF0052 12 290 1.2E-76 T 29-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CKQ55_RS03295 0b20470860a80277c99f84bc087af105 301 Gene3D G3DSA:3.40.50.10680 89 300 3.3E-39 T 29-03-2018 CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 217 293 1.8E-22 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 SUPERFAMILY SSF160240 215 294 1.96E-21 T 29-03-2018 CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 294 7.2E-67 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 Gene3D G3DSA:1.20.1510.10 13 212 4.4E-43 T 29-03-2018 CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 Pfam PF01545 Cation efflux family 19 212 1.6E-42 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 Gene3D G3DSA:3.30.70.1350 213 296 2.7E-21 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CKQ55_RS27580 9fcb4ea78e21ebe57caa29b670b0111c 302 SUPERFAMILY SSF161111 12 213 1.2E-53 T 29-03-2018 CKQ55_RS03035 898b87b4856d62a50bf1eea533e4a6fa 421 Gene3D G3DSA:2.60.120.330 1 421 1.9E-131 T 29-03-2018 IPR027443 Isopenicillin N synthase-like CKQ55_RS03035 898b87b4856d62a50bf1eea533e4a6fa 421 SUPERFAMILY SSF51197 6 419 8.61E-152 T 29-03-2018 CKQ55_RS03035 898b87b4856d62a50bf1eea533e4a6fa 421 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 1.0E-141 T 29-03-2018 IPR010856 Protein of unknown function DUF1479 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.0E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.0E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 SUPERFAMILY SSF48498 73 177 2.52E-23 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 SUPERFAMILY SSF46689 1 65 1.9E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.0E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 Gene3D G3DSA:1.10.10.60 1 58 2.7E-17 T 29-03-2018 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 Gene3D G3DSA:1.10.357.10 59 178 1.2E-13 T 29-03-2018 CKQ55_RS27435 b78002eb6a9e1b7ea162321efc08cda2 182 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS28215 f9acf3ab28e8ec050ccffd51e47f8863 164 Pfam PF00583 Acetyltransferase (GNAT) family 30 133 1.9E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS28215 f9acf3ab28e8ec050ccffd51e47f8863 164 SUPERFAMILY SSF55729 2 150 4.39E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS28215 f9acf3ab28e8ec050ccffd51e47f8863 164 Gene3D G3DSA:3.40.630.30 1 86 1.5E-24 T 29-03-2018 CKQ55_RS28215 f9acf3ab28e8ec050ccffd51e47f8863 164 Gene3D G3DSA:3.40.630.30 87 154 1.6E-14 T 29-03-2018 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 SMART SM00729 43 255 2.9E-43 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 Pfam PF04055 Radical SAM superfamily 50 203 2.6E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 SMART SM00876 220 312 1.9E-48 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.1E-20 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 PIRSF PIRSF001619 1 319 2.9E-139 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.734 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 SUPERFAMILY SSF102114 5 313 1.7E-94 T 29-03-2018 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 Gene3D G3DSA:3.20.20.70 4 315 6.7E-61 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS03350 e3c8568f8eb99a84e5b448039f5d220c 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.0E-124 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS14350 d62dc171dc9cb8d9b71a30ab48959f03 142 Gene3D G3DSA:1.10.530.40 8 141 7.4E-23 T 29-03-2018 IPR023347 Lysozyme domain GO:0003796 CKQ55_RS14350 d62dc171dc9cb8d9b71a30ab48959f03 142 Pfam PF00959 Phage lysozyme 35 123 1.9E-9 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CKQ55_RS14350 d62dc171dc9cb8d9b71a30ab48959f03 142 SUPERFAMILY SSF53955 12 129 1.69E-22 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PIRSF PIRSF005539 9 298 1.2E-97 T 29-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 SUPERFAMILY SSF53474 13 290 1.01E-60 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 2.8E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 2.8E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 2.8E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 14 290 2.6E-79 T 29-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 Pfam PF00561 alpha/beta hydrolase fold 31 279 5.9E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 Gene3D G3DSA:3.40.50.1820 10 293 3.8E-54 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 117 2.2E-10 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 71 2.2E-10 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22490 3f709029ba3ee064a10edb8ccdc68aff 299 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 32 40 2.2E-10 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 29-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 Hamap MF_00577 Urocanate hydratase [hutU]. 1 557 50.553 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 Pfam PF17392 Urocanase C-terminal domain 353 547 5.0E-92 T 29-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 0.0 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 Gene3D G3DSA:3.40.1770.10 197 556 2.3E-164 T 29-03-2018 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 Gene3D G3DSA:3.40.1770.10 11 153 2.3E-29 T 29-03-2018 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 SUPERFAMILY SSF111326 8 556 1.14E-262 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 Pfam PF01175 Urocanase Rossmann-like domain 142 350 1.7E-86 T 29-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 PIRSF PIRSF001423 2 558 3.3E-294 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07015 d403e822166cef7b95075d400b468c54 558 Pfam PF17391 Urocanase N-terminal domain 13 139 1.3E-62 T 29-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 Pfam PF03466 LysR substrate binding domain 99 307 6.7E-29 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 SUPERFAMILY SSF53850 99 308 2.9E-32 T 29-03-2018 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 SUPERFAMILY SSF46785 15 91 1.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 Gene3D G3DSA:3.40.190.10 185 277 6.9E-19 T 29-03-2018 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 307 4.5E-168 T 29-03-2018 IPR011781 D-serine deaminase transcriptional activator CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 6.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 6.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 6.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 7.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 Gene3D G3DSA:3.40.190.10 101 184 8.9E-16 T 29-03-2018 CKQ55_RS13195 6fbc9f9d32c9e902634779f370272f5c 309 Gene3D G3DSA:1.10.10.10 5 100 2.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06875 3525c62e364080e15192cdf2887d574c 522 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 247 8.5E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06875 3525c62e364080e15192cdf2887d574c 522 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 501 5.8E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06875 3525c62e364080e15192cdf2887d574c 522 SUPERFAMILY SSF161098 63 251 6.15E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06875 3525c62e364080e15192cdf2887d574c 522 SUPERFAMILY SSF161098 319 504 1.26E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06875 3525c62e364080e15192cdf2887d574c 522 Gene3D G3DSA:1.10.3720.10 274 519 7.1E-23 T 29-03-2018 CKQ55_RS06875 3525c62e364080e15192cdf2887d574c 522 Gene3D G3DSA:1.10.3720.10 20 261 3.9E-16 T 29-03-2018 CKQ55_RS26325 616536a0c22110fb2b6901add25ba949 144 Gene3D G3DSA:3.40.630.30 6 126 4.8E-19 T 29-03-2018 CKQ55_RS26325 616536a0c22110fb2b6901add25ba949 144 Pfam PF00583 Acetyltransferase (GNAT) family 37 119 1.7E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS26325 616536a0c22110fb2b6901add25ba949 144 SUPERFAMILY SSF55729 13 124 3.31E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 SUPERFAMILY SSF52540 4 286 3.59E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-29 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.9E-77 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CKQ55_RS15175 441d0e6e9ab218dceff72ac83ce0d7c8 290 Gene3D G3DSA:3.40.50.300 1 289 4.5E-41 T 29-03-2018 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 Gene3D G3DSA:3.40.190.10 86 181 2.2E-18 T 29-03-2018 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 SUPERFAMILY SSF46785 5 118 1.85E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 Gene3D G3DSA:1.10.10.10 5 85 6.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.2E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 SUPERFAMILY SSF53850 97 296 3.98E-34 T 29-03-2018 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 Pfam PF03466 LysR substrate binding domain 95 291 7.4E-28 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28385 b10a9a605715ed3320b6800ffb8285a4 303 Gene3D G3DSA:3.40.190.10 182 261 1.0E-10 T 29-03-2018 CKQ55_RS15385 2b3ba7ad59768a8fabe1af1b3c94b49f 130 SUPERFAMILY SSF56047 5 129 2.09E-45 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15385 2b3ba7ad59768a8fabe1af1b3c94b49f 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.967 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15385 2b3ba7ad59768a8fabe1af1b3c94b49f 130 Gene3D G3DSA:3.30.1370.30 1 66 9.9E-25 T 29-03-2018 CKQ55_RS15385 2b3ba7ad59768a8fabe1af1b3c94b49f 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15385 2b3ba7ad59768a8fabe1af1b3c94b49f 130 Gene3D G3DSA:3.30.1490.10 74 129 4.4E-22 T 29-03-2018 CKQ55_RS15385 2b3ba7ad59768a8fabe1af1b3c94b49f 130 Pfam PF00410 Ribosomal protein S8 5 129 1.5E-48 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 SUPERFAMILY SSF52374 145 262 1.16E-22 T 29-03-2018 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 SUPERFAMILY SSF52374 298 332 1.16E-22 T 29-03-2018 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 Pfam PF00583 Acetyltransferase (GNAT) family 18 103 2.7E-4 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 6 340 2.1E-159 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 Gene3D G3DSA:3.40.50.620 130 335 2.2E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 SMART SM00764 146 331 2.2E-124 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 110 339 6.0E-113 T 29-03-2018 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 146 202 5.5E-10 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 SUPERFAMILY SSF55729 27 126 7.98E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 Pfam PF08218 Citrate lyase ligase C-terminal domain 146 331 2.4E-80 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 Gene3D G3DSA:3.40.630.30 6 129 2.7E-10 T 29-03-2018 CKQ55_RS08455 a86777dba827e5f823b8a0a3b631076a 342 PIRSF PIRSF005751 1 342 6.0E-135 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CKQ55_RS23050 5bb60c9415afd76ec785ba0db675758c 875 Pfam PF00577 Outer membrane usher protein 205 787 4.8E-220 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23050 5bb60c9415afd76ec785ba0db675758c 875 SUPERFAMILY SSF141729 68 181 2.62E-36 T 29-03-2018 CKQ55_RS23050 5bb60c9415afd76ec785ba0db675758c 875 Pfam PF13953 PapC C-terminal domain 797 860 5.0E-22 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS23050 5bb60c9415afd76ec785ba0db675758c 875 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 322 332 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS23050 5bb60c9415afd76ec785ba0db675758c 875 Pfam PF13954 PapC N-terminal domain 45 189 4.1E-49 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 SUPERFAMILY SSF46785 8 113 8.84E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 SUPERFAMILY SSF53850 91 293 3.26E-39 T 29-03-2018 CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 Gene3D G3DSA:3.40.190.10 90 176 2.0E-12 T 29-03-2018 CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 Gene3D G3DSA:3.40.190.10 177 265 3.8E-22 T 29-03-2018 CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 Gene3D G3DSA:1.10.10.10 5 86 3.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.7E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28785 77c62396962f3fa180d99ab5eb51eeca 294 Pfam PF03466 LysR substrate binding domain 91 291 4.7E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS25645 75c1a5c676b0761f7e2e9ab85789b80e 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 172 4.1E-31 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CKQ55_RS25645 75c1a5c676b0761f7e2e9ab85789b80e 173 SUPERFAMILY SSF49329 27 173 1.14E-45 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CKQ55_RS25645 75c1a5c676b0761f7e2e9ab85789b80e 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 29-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CKQ55_RS25645 75c1a5c676b0761f7e2e9ab85789b80e 173 Gene3D G3DSA:2.60.40.200 20 173 1.9E-36 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CKQ55_RS04320 a63e77a89756b05056aaad3436841e55 411 Pfam PF13556 PucR C-terminal helix-turn-helix domain 341 399 1.3E-18 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CKQ55_RS04320 a63e77a89756b05056aaad3436841e55 411 SUPERFAMILY SSF46689 346 375 1.34E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS04320 a63e77a89756b05056aaad3436841e55 411 Pfam PF07905 Purine catabolism regulatory protein-like family 7 127 9.8E-27 T 29-03-2018 IPR012914 Purine catabolism PurC-like domain CKQ55_RS04320 a63e77a89756b05056aaad3436841e55 411 Gene3D G3DSA:1.10.10.60 332 378 1.0E-9 T 29-03-2018 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 PIRSF PIRSF037215 1 408 1.6E-181 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 Gene3D G3DSA:3.40.630.10 1 409 1.0E-46 T 29-03-2018 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 Pfam PF01546 Peptidase family M20/M25/M40 139 402 4.3E-17 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 SUPERFAMILY SSF55031 208 320 8.89E-44 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 SUPERFAMILY SSF53187 322 406 1.79E-82 T 29-03-2018 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 SUPERFAMILY SSF53187 1 209 1.79E-82 T 29-03-2018 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 Pfam PF07687 Peptidase dimerisation domain 206 303 7.2E-12 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 8.6E-158 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CKQ55_RS00550 9fdf3a65f67cc956e580e73342fe84ea 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.63 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CKQ55_RS01965 40e6506506184685bc35b4e313a6252d 180 Pfam PF07126 Cell-division protein ZapC 3 168 3.0E-69 T 29-03-2018 IPR009809 Cell division protein ZapC CKQ55_RS01965 40e6506506184685bc35b4e313a6252d 180 PIRSF PIRSF010252 1 176 1.3E-62 T 29-03-2018 IPR009809 Cell division protein ZapC CKQ55_RS01965 40e6506506184685bc35b4e313a6252d 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 40.036 T 29-03-2018 IPR009809 Cell division protein ZapC CKQ55_RS09480 065ec689ca63698e786eec6c0a216c15 549 Gene3D G3DSA:3.20.14.10 410 532 6.9E-22 T 29-03-2018 CKQ55_RS09480 065ec689ca63698e786eec6c0a216c15 549 Gene3D G3DSA:3.40.275.10 213 338 2.1E-22 T 29-03-2018 CKQ55_RS09480 065ec689ca63698e786eec6c0a216c15 549 Gene3D G3DSA:3.40.50.1070 22 177 3.1E-34 T 29-03-2018 CKQ55_RS09480 065ec689ca63698e786eec6c0a216c15 549 SUPERFAMILY SSF53743 191 373 2.7E-32 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CKQ55_RS09480 065ec689ca63698e786eec6c0a216c15 549 SUPERFAMILY SSF53743 24 156 2.7E-32 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CKQ55_RS18950 867f7bb8adce1201311850771f8d65f0 259 Gene3D G3DSA:3.40.50.300 6 240 3.9E-54 T 29-03-2018 CKQ55_RS18950 867f7bb8adce1201311850771f8d65f0 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS18950 867f7bb8adce1201311850771f8d65f0 259 SMART SM00382 29 218 2.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18950 867f7bb8adce1201311850771f8d65f0 259 SUPERFAMILY SSF52540 7 233 1.25E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18950 867f7bb8adce1201311850771f8d65f0 259 Pfam PF00005 ABC transporter 21 168 3.2E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 540 556 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 499 635 1.4E-32 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 1.5E-187 T 29-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 SUPERFAMILY SSF52794 378 467 4.29E-22 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 380 454 2.0E-9 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 Gene3D G3DSA:3.40.930.10 491 636 3.6E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 Gene3D G3DSA:3.40.50.2300 366 472 1.8E-20 T 29-03-2018 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 SUPERFAMILY SSF55804 497 635 8.5E-40 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS13890 bca8ad0eb4804dc1438a2619640a615e 636 Pfam PF02378 Phosphotransferase system, EIIC 17 277 1.3E-19 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 SUPERFAMILY SSF52540 261 491 3.31E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 Pfam PF12698 ABC-2 family transporter protein 566 901 2.8E-39 T 29-03-2018 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 Pfam PF00005 ABC transporter 285 428 1.5E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 Pfam PF00005 ABC transporter 20 167 1.3E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 Gene3D G3DSA:3.40.1710.10 575 728 9.5E-24 T 29-03-2018 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 SUPERFAMILY SSF52540 6 230 8.12E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 SMART SM00382 29 246 2.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 SMART SM00382 293 478 5.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 Gene3D G3DSA:3.40.50.300 267 555 1.6E-63 T 29-03-2018 CKQ55_RS09415 26249d078e6645a87702ea339eda6313 909 Gene3D G3DSA:3.40.50.300 1 266 3.5E-57 T 29-03-2018 CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 787 0.0 T 29-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 Gene3D G3DSA:2.140.10.10 157 773 1.4E-99 T 29-03-2018 CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 Pfam PF13360 PQQ-like domain 196 308 6.6E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 Pfam PF13360 PQQ-like domain 664 752 4.4E-5 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 403 424 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 Pfam PF01011 PQQ enzyme repeat 441 467 1.1E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 709 742 0.017 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 219 250 0.01 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 481 512 530.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 281 313 140.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 408 457 41.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 634 681 110.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SMART SM00564 338 379 0.9 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SUPERFAMILY SSF50998 164 521 4.19E-150 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS28165 2d1c8ac0362cfc5612bf71bf44ffffdb 790 SUPERFAMILY SSF50998 558 772 4.19E-150 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS02130 4f56cee5b3478f5d305ffe4cf8307e65 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 6.7E-81 T 29-03-2018 IPR003776 YcaO-like domain CKQ55_RS02130 4f56cee5b3478f5d305ffe4cf8307e65 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 1.6E-166 T 29-03-2018 IPR003776 YcaO-like domain CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 Pfam PF08220 DeoR-like helix-turn-helix domain 3 50 1.6E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 Gene3D G3DSA:3.40.50.1360 66 232 7.4E-33 T 29-03-2018 CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 SMART SM01134 66 226 1.3E-55 T 29-03-2018 CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 Pfam PF00455 DeoR C terminal sensor domain 69 223 5.4E-44 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 SUPERFAMILY SSF46785 3 52 5.6E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 17 31 7.6E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 31 49 7.6E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 SUPERFAMILY SSF100950 68 225 6.05E-28 T 29-03-2018 CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 Gene3D G3DSA:1.10.10.10 1 63 1.5E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12240 39b628815b0aa2f7f52a4ee79797095f 249 SMART SM00420 3 51 5.2E-11 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 SUPERFAMILY SSF50331 243 373 1.34E-21 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 SMART SM00382 29 217 1.6E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 Gene3D G3DSA:2.40.50.100 250 298 8.3E-7 T 29-03-2018 CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 Pfam PF08402 TOBE domain 289 365 3.7E-5 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 Pfam PF00005 ABC transporter 21 162 1.3E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 Gene3D G3DSA:3.40.50.300 2 249 1.8E-67 T 29-03-2018 CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 SUPERFAMILY SSF52540 6 247 2.93E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17950 1c6913c81bae3385143089829972c573 375 Gene3D G3DSA:2.40.50.140 299 356 1.0E-9 T 29-03-2018 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 SUPERFAMILY SSF55811 2 131 5.15E-26 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 47.322 T 29-03-2018 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00240+3.6.1.23+3.6.1.12 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 Gene3D G3DSA:3.90.79.10 1 140 3.1E-28 T 29-03-2018 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.4E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.4E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS21285 9c8448765110bbca879c217bae4527b1 141 Pfam PF00293 NUDIX domain 1 131 7.8E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS22220 e736ab5bee120c9f037f936133fe5d90 91 Pfam PF10743 Regulatory phage protein cox 2 87 6.2E-40 T 29-03-2018 IPR019679 Bacteriophage P2, regulatory protein Cox CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 SMART SM00518 3 279 2.2E-135 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 Gene3D G3DSA:3.20.20.150 1 285 3.6E-65 T 29-03-2018 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 1.1E-111 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 6.4E-43 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 44.891 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CKQ55_RS21730 98c3def9dc3547ad436d406085d96e6d 285 SUPERFAMILY SSF51658 1 278 1.09E-104 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS27645 9cfc68b3b36fa9e18715282f5b9b66be 153 Gene3D G3DSA:1.20.5.40 78 107 1.4E-14 T 29-03-2018 CKQ55_RS27645 9cfc68b3b36fa9e18715282f5b9b66be 153 Gene3D G3DSA:3.40.50.1390 4 77 1.0E-17 T 29-03-2018 CKQ55_RS27645 9cfc68b3b36fa9e18715282f5b9b66be 153 Pfam PF00239 Resolvase, N terminal domain 13 108 3.2E-26 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS27645 9cfc68b3b36fa9e18715282f5b9b66be 153 SUPERFAMILY SSF53041 5 108 9.16E-26 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS27645 9cfc68b3b36fa9e18715282f5b9b66be 153 SMART SM00857 5 109 2.0E-15 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS27645 9cfc68b3b36fa9e18715282f5b9b66be 153 ProSitePatterns PS00398 Site-specific recombinases signature 2. 28 40 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.6E-66 T 29-03-2018 CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 Gene3D G3DSA:3.40.50.720 1 48 4.3E-9 T 29-03-2018 CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 Gene3D G3DSA:3.40.50.720 49 249 4.4E-60 T 29-03-2018 CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0062 T 29-03-2018 CKQ55_RS03200 9d2c569cb6af5f3d614b2719579910c1 249 SUPERFAMILY SSF51735 4 248 4.65E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 Gene3D G3DSA:3.30.9.10 95 180 2.6E-16 T 29-03-2018 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 Gene3D G3DSA:3.30.9.10 181 320 1.0E-38 T 29-03-2018 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 3.9E-47 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 Gene3D G3DSA:3.40.50.720 3 94 0.0015 T 29-03-2018 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 SUPERFAMILY SSF54373 226 319 5.89E-7 T 29-03-2018 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 SUPERFAMILY SSF51905 312 375 2.22E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 SUPERFAMILY SSF51905 3 260 2.22E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 8.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 8.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 8.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 8.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 8.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 8.7E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14955 0fcaa44bcee3329a02d051101ac78b11 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 481 1.4E-14 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CKQ55_RS14860 1fab8e025397c526f6c796153ae0736d 281 Gene3D G3DSA:1.10.3720.10 68 278 1.2E-30 T 29-03-2018 CKQ55_RS14860 1fab8e025397c526f6c796153ae0736d 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 2.0E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14860 1fab8e025397c526f6c796153ae0736d 281 SUPERFAMILY SSF161098 4 277 1.5E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 PIRSF PIRSF015753 5 324 1.3E-133 T 29-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 SUPERFAMILY SSF52833 41 99 3.06E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 SUPERFAMILY SSF52833 126 162 3.06E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 256 2.3E-12 T 29-03-2018 CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 Gene3D G3DSA:3.40.30.10 41 188 8.5E-38 T 29-03-2018 CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 2.1E-23 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 Gene3D G3DSA:1.20.1050.10 189 326 4.0E-42 T 29-03-2018 CKQ55_RS16330 f634454c88f6015f67bc71c7ae7f935d 328 SUPERFAMILY SSF47616 173 324 1.67E-36 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 SUPERFAMILY SSF48179 280 483 1.46E-67 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 Gene3D G3DSA:3.40.50.720 2 278 6.4E-105 T 29-03-2018 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 Gene3D G3DSA:1.10.1040.10 279 486 5.0E-71 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 1.3E-49 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 3.8E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 3.8E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 3.8E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 3.8E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 SUPERFAMILY SSF51735 5 278 8.66E-95 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26230 e243ec0440e9a34fd47af1fdecd3cac8 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 214 459 5.0E-98 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 Pfam PF00816 H-NS histone family 32 127 3.3E-20 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 Gene3D G3DSA:1.10.287.1050 1 57 4.0E-26 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 SUPERFAMILY SSF81273 93 135 8.24E-12 T 29-03-2018 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 SMART SM00528 87 135 3.0E-25 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 PIRSF PIRSF002096 1 135 3.6E-57 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 Gene3D G3DSA:4.10.430.10 93 135 3.3E-19 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CKQ55_RS24600 cd3cabe305318f0952feb47c29ff7dba 135 SUPERFAMILY SSF81273 2 58 3.53E-18 T 29-03-2018 CKQ55_RS19300 7a456e57c01747055aca39b02d367263 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 8.4E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS19300 7a456e57c01747055aca39b02d367263 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.5E-28 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS19300 7a456e57c01747055aca39b02d367263 188 Gene3D G3DSA:3.40.50.1000 77 186 6.5E-21 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS19300 7a456e57c01747055aca39b02d367263 188 SUPERFAMILY SSF56784 5 185 6.67E-44 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS19300 7a456e57c01747055aca39b02d367263 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 4.9E-61 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CKQ55_RS19300 7a456e57c01747055aca39b02d367263 188 Gene3D G3DSA:1.10.150.240 18 76 3.0E-13 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS23870 601d39ae51222bd3e6ee1c693b78353d 227 Gene3D G3DSA:1.10.1710.10 1 121 3.2E-41 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS23870 601d39ae51222bd3e6ee1c693b78353d 227 SMART SM00945 5 119 1.9E-59 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS23870 601d39ae51222bd3e6ee1c693b78353d 227 Pfam PF17516 ProQ C-terminal domain 178 227 7.9E-24 T 29-03-2018 IPR035236 RNA chaperone ProQ, C-terminal CKQ55_RS23870 601d39ae51222bd3e6ee1c693b78353d 227 SUPERFAMILY SSF48657 5 119 4.71E-40 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS23870 601d39ae51222bd3e6ee1c693b78353d 227 Pfam PF04352 ProQ/FINO family 8 115 4.9E-42 T 29-03-2018 IPR016103 ProQ/FinO domain CKQ55_RS23870 601d39ae51222bd3e6ee1c693b78353d 227 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 226 29.69 T 29-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CKQ55_RS24930 a74f402f66407bcb484b82f9a8304213 248 SUPERFAMILY SSF52540 2 231 8.37E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24930 a74f402f66407bcb484b82f9a8304213 248 Pfam PF00005 ABC transporter 17 172 1.6E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24930 a74f402f66407bcb484b82f9a8304213 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24930 a74f402f66407bcb484b82f9a8304213 248 SMART SM00382 26 223 4.3E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24930 a74f402f66407bcb484b82f9a8304213 248 Gene3D G3DSA:3.40.50.300 1 248 2.4E-44 T 29-03-2018 CKQ55_RS24930 a74f402f66407bcb484b82f9a8304213 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.2E-114 T 29-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 Gene3D G3DSA:3.90.1150.10 20 97 8.4E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 Gene3D G3DSA:3.90.1150.10 277 396 1.8E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 Pfam PF00155 Aminotransferase class I and II 42 386 1.8E-78 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 394 53.909 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 Gene3D G3DSA:3.40.640.10 98 276 2.9E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 396 2.3E-221 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 SUPERFAMILY SSF53383 4 395 3.67E-125 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS13795 d7987c4ad103c6d476cfbf506ed0be0c 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 192 1.0E-58 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 Gene3D G3DSA:2.10.70.20 147 197 5.6E-18 T 29-03-2018 CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 SUPERFAMILY SSF54523 41 194 1.67E-46 T 29-03-2018 CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 Gene3D G3DSA:3.10.610.10 38 143 5.9E-27 T 29-03-2018 CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 5.2E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 2.0E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07780 cdad238eb312cdf66a5c6c8d417eaff7 198 Pfam PF11612 Type II secretion system (T2SS), protein J 58 190 1.1E-36 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 4.6E-99 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 SUPERFAMILY SSF53850 26 257 7.25E-65 T 29-03-2018 CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 SMART SM00062 27 256 1.5E-75 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 Gene3D G3DSA:3.40.190.10 16 140 2.1E-34 T 29-03-2018 CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 Gene3D G3DSA:3.40.190.10 141 259 1.6E-16 T 29-03-2018 CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS20965 f4833f34d89217123e68cbd039cf805a 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.0E-61 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 433 3.6E-115 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 Pfam PF07687 Peptidase dimerisation domain 192 279 1.3E-4 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 Pfam PF01546 Peptidase family M20/M25/M40 97 362 2.4E-7 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 SUPERFAMILY SSF53187 300 329 1.01E-54 T 29-03-2018 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 SUPERFAMILY SSF53187 384 447 1.01E-54 T 29-03-2018 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 SUPERFAMILY SSF53187 6 200 1.01E-54 T 29-03-2018 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 SUPERFAMILY SSF55031 192 293 1.94E-17 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 Gene3D G3DSA:3.40.630.10 305 465 1.1E-7 T 29-03-2018 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 Gene3D G3DSA:3.40.630.10 2 300 2.6E-43 T 29-03-2018 CKQ55_RS25945 e5d710e54d75e59e6df47ab1541319e3 481 PIRSF PIRSF037227 1 481 5.5E-220 T 29-03-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B CKQ55_RS22975 e2fc5afeb204f5fb8fc4c45a49b2d899 129 Pfam PF14552 Tautomerase enzyme 38 118 7.4E-27 T 29-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CKQ55_RS22975 e2fc5afeb204f5fb8fc4c45a49b2d899 129 Gene3D G3DSA:3.30.429.10 1 129 2.8E-27 T 29-03-2018 CKQ55_RS22975 e2fc5afeb204f5fb8fc4c45a49b2d899 129 SUPERFAMILY SSF55331 2 128 2.62E-35 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 Gene3D G3DSA:3.40.640.10 122 370 1.2E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 SUPERFAMILY SSF46785 2 70 1.01E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 Gene3D G3DSA:1.10.10.10 1 68 8.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 Gene3D G3DSA:3.90.1150.10 371 469 7.7E-24 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 Pfam PF00155 Aminotransferase class I and II 146 447 6.2E-32 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 SUPERFAMILY SSF53383 92 468 1.5E-92 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.3E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS28045 50b5c5465da406e9d087455a28f70377 470 SMART SM00345 7 66 3.9E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01695 61544aab33f148e3e76b7cf1f40f5f60 241 Gene3D G3DSA:1.10.3720.10 1 220 1.2E-48 T 29-03-2018 CKQ55_RS01695 61544aab33f148e3e76b7cf1f40f5f60 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 109 3.1E-29 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS01695 61544aab33f148e3e76b7cf1f40f5f60 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 212 5.1E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01695 61544aab33f148e3e76b7cf1f40f5f60 241 SUPERFAMILY SSF161098 13 200 7.59E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 SMART SM01060 7 391 4.5E-282 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PIRSF PIRSF038928 1 480 7.4E-217 T 29-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 Pfam PF06628 Catalase-related immune-responsive 414 475 6.3E-20 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 Pfam PF00199 Catalase 7 388 3.7E-186 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PRINTS PR00067 Catalase signature 104 121 7.7E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PRINTS PR00067 Catalase signature 123 141 7.7E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PRINTS PR00067 Catalase signature 288 315 7.7E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PRINTS PR00067 Catalase signature 83 101 7.7E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PRINTS PR00067 Catalase signature 20 43 7.7E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 PRINTS PR00067 Catalase signature 320 346 7.7E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 SUPERFAMILY SSF56634 4 476 9.29E-211 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 Gene3D G3DSA:2.40.180.10 1 357 1.3E-158 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS21295 c67c96796d896c08480b017fbe82033e 482 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CKQ55_RS17655 a4d3d21009275957b45f448aca9c2333 549 Gene3D G3DSA:1.20.1250.20 31 259 3.2E-20 T 29-03-2018 CKQ55_RS17655 a4d3d21009275957b45f448aca9c2333 549 Gene3D G3DSA:1.20.1250.20 267 497 2.2E-19 T 29-03-2018 CKQ55_RS17655 a4d3d21009275957b45f448aca9c2333 549 Pfam PF07690 Major Facilitator Superfamily 76 440 2.9E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS17655 a4d3d21009275957b45f448aca9c2333 549 SUPERFAMILY SSF103473 29 489 4.32E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23185 f39c2b4617ed39bc264012176d85ac73 106 SMART SM00886 2 92 6.9E-7 T 29-03-2018 IPR013097 Stress responsive alpha-beta barrel CKQ55_RS23185 f39c2b4617ed39bc264012176d85ac73 106 Gene3D G3DSA:3.30.70.100 1 97 1.3E-12 T 29-03-2018 CKQ55_RS23185 f39c2b4617ed39bc264012176d85ac73 106 Pfam PF07876 Stress responsive A/B Barrel Domain 3 90 1.0E-9 T 29-03-2018 IPR013097 Stress responsive alpha-beta barrel CKQ55_RS23185 f39c2b4617ed39bc264012176d85ac73 106 SUPERFAMILY SSF54909 1 90 3.75E-11 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 Gene3D G3DSA:2.40.50.100 60 127 3.0E-16 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 Gene3D G3DSA:1.20.1600.10 191 361 7.1E-17 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 Pfam PF13437 HlyD family secretion protein 228 346 1.9E-15 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 72 92 9.2E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 358 9.2E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 Pfam PF13533 Biotin-lipoyl like 62 109 1.1E-12 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 SUPERFAMILY SSF111369 132 191 3.4E-5 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 SUPERFAMILY SSF111369 62 136 3.27E-12 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 SUPERFAMILY SSF111369 202 303 2.22E-11 T 29-03-2018 CKQ55_RS28255 f311594461af6f9aa8c0beff6aaa03be 361 Gene3D G3DSA:1.10.287.470 128 189 1.7E-6 T 29-03-2018 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 Gene3D G3DSA:3.10.20.30 4 111 2.1E-33 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 SUPERFAMILY SSF54292 4 109 4.57E-35 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 PRINTS PR00355 Adrenodoxin signature 42 52 2.2E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 PRINTS PR00355 Adrenodoxin signature 60 74 2.2E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 PRINTS PR00355 Adrenodoxin signature 83 91 2.2E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 8.0E-62 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CKQ55_RS20145 db85bbb6c60138543b97c8d9fbc92b5d 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 92 7.6E-16 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 6.6E-101 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 SUPERFAMILY SSF117916 16 90 1.47E-5 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.441 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 SUPERFAMILY SSF52540 108 355 1.07E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 Gene3D G3DSA:3.40.50.300 106 358 1.5E-61 T 29-03-2018 CKQ55_RS21970 afba228592c7427378be49512ea83f3c 369 Gene3D G3DSA:3.30.300.130 11 100 6.9E-4 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS10030 644afb49d6f60e622485d5c05f414cca 340 SUPERFAMILY SSF53474 63 320 4.95E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS10030 644afb49d6f60e622485d5c05f414cca 340 Pfam PF07859 alpha/beta hydrolase fold 81 302 1.2E-22 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CKQ55_RS10030 644afb49d6f60e622485d5c05f414cca 340 Gene3D G3DSA:3.40.50.1820 31 337 1.8E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS10950 c2f19527d6db7e027bd75f9c5bfe3eee 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS10950 c2f19527d6db7e027bd75f9c5bfe3eee 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 5.8E-64 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS10950 c2f19527d6db7e027bd75f9c5bfe3eee 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 29-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CKQ55_RS10950 c2f19527d6db7e027bd75f9c5bfe3eee 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS10950 c2f19527d6db7e027bd75f9c5bfe3eee 549 Pfam PF00474 Sodium:solute symporter family 63 468 1.1E-135 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS10950 c2f19527d6db7e027bd75f9c5bfe3eee 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 57.534 T 29-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CKQ55_RS16180 3acbc9e05ddcd2a632abb03f81f7bb1b 346 Pfam PF03773 Predicted permease 74 341 2.7E-26 T 29-03-2018 IPR005524 Predicted permease DUF318 CKQ55_RS16180 3acbc9e05ddcd2a632abb03f81f7bb1b 346 Pfam PF03773 Predicted permease 24 149 1.4E-11 T 29-03-2018 IPR005524 Predicted permease DUF318 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Gene3D G3DSA:1.10.8.60 297 368 7.0E-28 T 29-03-2018 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 29-03-2018 IPR024633 DnaA N-terminal domain CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 465 34.431 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Gene3D G3DSA:3.40.50.300 128 295 2.4E-21 T 29-03-2018 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 SMART SM00382 163 365 3.4E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 SUPERFAMILY SSF52540 132 342 2.13E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Pfam PF00308 Bacterial dnaA protein 132 348 6.8E-99 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Gene3D G3DSA:1.10.1750.10 369 465 1.5E-36 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 SUPERFAMILY SSF48295 362 465 3.4E-38 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 464 5.2E-187 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 SMART SM00760 374 443 6.1E-45 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CKQ55_RS13070 b5d93036ff4baa56538d690b655d22ef 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 1.0E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 Pfam PF07484 Phage Tail Collar Domain 97 145 8.2E-8 T 29-03-2018 IPR011083 Phage tail collar domain CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 SUPERFAMILY SSF88874 91 260 1.57E-28 T 29-03-2018 CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 Gene3D G3DSA:3.90.1340.10 85 219 2.2E-11 T 29-03-2018 IPR011083 Phage tail collar domain CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 Pfam PF03335 Phage tail fibre repeat 162 175 0.12 T 29-03-2018 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 Pfam PF03335 Phage tail fibre repeat 219 227 0.69 T 29-03-2018 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 Pfam PF03335 Phage tail fibre repeat 184 192 23.0 T 29-03-2018 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 CKQ55_RS05370 c33fc386e0209dfca228fa76ee26d24b 261 Pfam PF03335 Phage tail fibre repeat 230 238 0.75 T 29-03-2018 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 CKQ55_RS03920 1d8bc3cfc494e45ae05f37951add2d95 150 Gene3D G3DSA:1.10.10.10 4 88 7.7E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03920 1d8bc3cfc494e45ae05f37951add2d95 150 SUPERFAMILY SSF46785 6 134 4.74E-45 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03920 1d8bc3cfc494e45ae05f37951add2d95 150 Pfam PF01475 Ferric uptake regulator family 10 130 8.4E-48 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CKQ55_RS25895 9ffdbd3493a535bd2dffdbab91cf0692 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 5.5E-177 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CKQ55_RS25895 9ffdbd3493a535bd2dffdbab91cf0692 460 PIRSF PIRSF006060 1 460 3.5E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS25895 9ffdbd3493a535bd2dffdbab91cf0692 460 Pfam PF13520 Amino acid permease 5 413 7.3E-78 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS27310 d722e689688cd457ab5524323b99877e 847 Gene3D G3DSA:3.20.20.80 6 743 6.8E-100 T 29-03-2018 CKQ55_RS27310 d722e689688cd457ab5524323b99877e 847 Pfam PF00128 Alpha amylase, catalytic domain 25 115 1.1E-17 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27310 d722e689688cd457ab5524323b99877e 847 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 3 833 1.2E-298 T 29-03-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 CKQ55_RS27310 d722e689688cd457ab5524323b99877e 847 SUPERFAMILY SSF51445 3 412 1.89E-128 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS27310 d722e689688cd457ab5524323b99877e 847 SUPERFAMILY SSF51445 444 741 1.89E-128 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS27310 d722e689688cd457ab5524323b99877e 847 SMART SM00642 11 416 6.0E-7 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 SUPERFAMILY SSF52540 3 253 3.59E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 Gene3D G3DSA:3.40.50.300 273 533 1.0E-73 T 29-03-2018 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 Gene3D G3DSA:3.40.50.300 1 266 1.1E-71 T 29-03-2018 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 Pfam PF00005 ABC transporter 24 182 9.0E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 Pfam PF00005 ABC transporter 296 448 3.5E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 SMART SM00382 305 505 5.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 SMART SM00382 32 231 5.2E-22 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 SUPERFAMILY SSF52540 277 519 5.85E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 531 4.8E-5 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 255 0.21 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS27680 b79ee7d1aa26cd79c55a96a848a4e791 534 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 453 8.1E-188 T 29-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 SUPERFAMILY SSF51338 1 65 1.5E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 SUPERFAMILY SSF51338 350 457 4.59E-35 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 SUPERFAMILY SSF51556 54 381 5.68E-99 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 Pfam PF01979 Amidohydrolase family 50 434 4.9E-26 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 Gene3D G3DSA:2.30.40.10 1 61 2.5E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 Gene3D G3DSA:3.20.20.140 62 279 3.8E-52 T 29-03-2018 CKQ55_RS24335 9eadc219a9ab758854288f5be76d4696 468 Gene3D G3DSA:3.20.20.140 280 422 3.4E-43 T 29-03-2018 CKQ55_RS30100 76c48a79310ed4ff642e87335ee08ae8 80 Pfam PF06183 DinI-like family 17 77 2.5E-21 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS30100 76c48a79310ed4ff642e87335ee08ae8 80 Gene3D G3DSA:3.30.910.10 1 77 7.7E-27 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS30100 76c48a79310ed4ff642e87335ee08ae8 80 SUPERFAMILY SSF54857 1 78 4.45E-25 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS00160 76c48a79310ed4ff642e87335ee08ae8 80 Pfam PF06183 DinI-like family 17 77 2.5E-21 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS00160 76c48a79310ed4ff642e87335ee08ae8 80 Gene3D G3DSA:3.30.910.10 1 77 7.7E-27 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS00160 76c48a79310ed4ff642e87335ee08ae8 80 SUPERFAMILY SSF54857 1 78 4.45E-25 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 TIGRFAM TIGR00400 mgtE: magnesium transporter 54 477 3.4E-79 T 29-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 Pfam PF01769 Divalent cation transporter 349 470 3.8E-24 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 SUPERFAMILY SSF161093 306 477 3.14E-48 T 29-03-2018 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 Pfam PF03448 MgtE intracellular N domain 63 163 7.4E-23 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 SMART SM00924 62 165 9.5E-32 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 Gene3D G3DSA:3.10.580.10 161 288 2.2E-16 T 29-03-2018 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 SUPERFAMILY SSF54631 164 304 1.04E-25 T 29-03-2018 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 Gene3D G3DSA:1.25.60.10 36 160 6.9E-17 T 29-03-2018 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 Pfam PF00571 CBS domain 229 283 7.4E-6 T 29-03-2018 IPR000644 CBS domain CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 SUPERFAMILY SSF158791 50 162 4.32E-22 T 29-03-2018 CKQ55_RS21440 901244540c1d578b2c66aa291ad8ab71 478 Gene3D G3DSA:1.10.357.20 305 478 4.9E-34 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CKQ55_RS14870 31c857a168f1e72903de18669cc73faf 246 SUPERFAMILY SSF51695 5 239 7.06E-63 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CKQ55_RS14870 31c857a168f1e72903de18669cc73faf 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 6.2E-40 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CKQ55_RS14870 31c857a168f1e72903de18669cc73faf 246 Gene3D G3DSA:3.20.20.190 2 241 5.1E-60 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 PIRSF PIRSF036427 1 236 5.5E-73 T 29-03-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 SUPERFAMILY SSF53790 1 235 5.1E-43 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 Gene3D G3DSA:3.40.1010.10 2 147 2.3E-24 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 3.8E-79 T 29-03-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CKQ55_RS18355 536635add7889f253f6b5eca1fc8d8da 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 8.5E-45 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 SUPERFAMILY SSF52540 365 814 6.59E-107 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1124 21.165 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 PIRSF PIRSF000980 1 1124 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 7.9E-299 T 29-03-2018 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 SUPERFAMILY SSF52540 1 348 4.3E-124 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 Gene3D G3DSA:1.10.10.160 86 185 1.8E-29 T 29-03-2018 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1086 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 Gene3D G3DSA:1.10.486.10 443 651 1.8E-70 T 29-03-2018 CKQ55_RS18135 fc04a41d7c639f70fe44ae750bfe751a 1124 SUPERFAMILY SSF52980 821 1120 1.98E-96 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS15760 5ac7b5fcfa105abc9c3295ebfd5caa76 89 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 89 35.448 T 29-03-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS15760 5ac7b5fcfa105abc9c3295ebfd5caa76 89 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 79 1.1E-19 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS15760 5ac7b5fcfa105abc9c3295ebfd5caa76 89 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 82 1.8E-26 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS01935 b45df954ad9ccb4ec59f0482c0a42d75 187 Gene3D G3DSA:3.40.50.10610 12 187 1.9E-46 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CKQ55_RS01935 b45df954ad9ccb4ec59f0482c0a42d75 187 SUPERFAMILY SSF159594 24 185 4.97E-30 T 29-03-2018 CKQ55_RS01935 b45df954ad9ccb4ec59f0482c0a42d75 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 3.1E-42 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Gene3D G3DSA:3.30.70.1430 564 664 5.5E-20 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Pfam PF00873 AcrB/AcrD/AcrF family 1 1020 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82693 562 664 3.77E-26 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Gene3D G3DSA:3.30.70.1430 38 140 1.7E-26 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82693 38 130 4.97E-26 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82714 183 272 1.44E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82693 136 182 6.8E-23 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82693 275 331 6.8E-23 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1022 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Gene3D G3DSA:3.30.2090.10 181 276 3.1E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82866 298 498 1.96E-44 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82866 824 1020 3.92E-44 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Gene3D G3DSA:3.30.2090.10 714 802 2.2E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82714 715 801 1.24E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82693 665 714 5.23E-23 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 SUPERFAMILY SSF82693 801 850 5.23E-23 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.7E-82 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Gene3D G3DSA:1.20.1640.10 803 1022 3.8E-40 T 29-03-2018 CKQ55_RS04715 cc54f0a428d696933ae6523692824515 1030 Gene3D G3DSA:1.20.1640.10 288 506 8.6E-44 T 29-03-2018 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 SUPERFAMILY SSF51215 19 138 6.02E-21 T 29-03-2018 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 258 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 SUPERFAMILY SSF46689 217 264 1.84E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 Gene3D G3DSA:3.90.1240.10 179 271 7.1E-16 T 29-03-2018 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 Gene3D G3DSA:2.60.120.280 19 178 9.0E-17 T 29-03-2018 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 SMART SM00342 180 262 3.8E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 Pfam PF12833 Helix-turn-helix domain 186 263 9.4E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS09150 20439655039f0161f00a99fc8887788d 271 Pfam PF02311 AraC-like ligand binding domain 29 136 6.7E-18 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS15805 2448c937a210fce492d9d4f5e1079a98 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.9E-46 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15805 2448c937a210fce492d9d4f5e1079a98 130 SUPERFAMILY SSF54211 5 130 2.96E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS15805 2448c937a210fce492d9d4f5e1079a98 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.021 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CKQ55_RS15805 2448c937a210fce492d9d4f5e1079a98 130 Gene3D G3DSA:3.30.230.10 3 130 2.7E-52 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS15805 2448c937a210fce492d9d4f5e1079a98 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 Pfam PF13307 Helicase C-terminal domain 532 688 1.4E-24 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 Pfam PF00270 DEAD/DEAH box helicase 31 94 1.6E-5 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 Gene3D G3DSA:3.40.50.300 24 483 2.3E-27 T 29-03-2018 CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SMART SM00488 18 294 0.0042 T 29-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 Pfam PF06733 DEAD_2 196 264 9.5E-7 T 29-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SUPERFAMILY SSF52540 199 270 1.16E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SUPERFAMILY SSF52540 46 97 1.16E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SUPERFAMILY SSF52540 451 465 1.16E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SUPERFAMILY SSF52540 500 670 1.16E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SMART SM00487 23 324 0.0015 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS03180 7453ae1a939d57b1c6ed2a71c995ac38 714 SMART SM00491 544 676 1.2E-37 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 Gene3D G3DSA:1.10.40.60 100 216 2.9E-30 T 29-03-2018 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 Pfam PF03934 Type II secretion system (T2SS), protein K 31 312 1.5E-81 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 Gene3D G3DSA:1.10.40.60 218 280 6.9E-19 T 29-03-2018 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 SUPERFAMILY SSF158544 217 281 5.49E-16 T 29-03-2018 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 SUPERFAMILY SSF54523 283 321 4.39E-22 T 29-03-2018 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 SUPERFAMILY SSF54523 36 101 4.39E-22 T 29-03-2018 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 SUPERFAMILY SSF158544 102 214 7.32E-28 T 29-03-2018 CKQ55_RS04805 379b6e93662d3890c136663a04ea54af 328 PIRSF PIRSF002786 1 322 9.9E-75 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CKQ55_RS02740 863984855c937999a8840684948a9879 147 Gene3D G3DSA:3.40.630.30 3 128 0.0072 T 29-03-2018 CKQ55_RS02740 863984855c937999a8840684948a9879 147 SUPERFAMILY SSF55729 9 112 7.59E-5 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Pfam PF00158 Sigma-54 interaction domain 107 272 2.0E-47 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 SUPERFAMILY SSF63520 818 908 1.27E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 133 146 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Pfam PF03610 PTS system fructose IIA component 564 650 8.9E-6 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 SUPERFAMILY SSF52540 108 346 2.02E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:1.10.10.10 1 71 7.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:3.40.50.510 548 692 1.2E-17 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:1.10.8.60 288 368 1.1E-7 T 29-03-2018 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:3.40.50.2300 693 804 0.0035 T 29-03-2018 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:3.40.50.300 114 287 1.5E-18 T 29-03-2018 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:1.10.1790.10 455 547 6.9E-4 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Pfam PF00874 PRD domain 827 908 1.1E-6 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 SUPERFAMILY SSF53062 563 673 1.92E-11 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 Gene3D G3DSA:1.10.1790.10 814 913 2.0E-6 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS08970 5fc9c1405e47b927b123fa3a58f153c6 921 SMART SM00382 129 279 1.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 SMART SM00971 9 113 4.7E-65 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 SUPERFAMILY SSF51161 4 260 1.37E-68 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 Gene3D G3DSA:1.10.3130.10 2 135 2.6E-39 T 29-03-2018 CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 PIRSF PIRSF000441 75 266 2.6E-61 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.2E-39 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 Gene3D G3DSA:2.160.10.10 136 268 4.2E-30 T 29-03-2018 CKQ55_RS13845 8ca402e84a990c196712aeb512436f69 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-75 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Gene3D G3DSA:3.40.50.970 1 254 1.7E-48 T 29-03-2018 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 SUPERFAMILY SSF52922 255 409 1.33E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Gene3D G3DSA:3.40.50.970 793 1168 1.0E-104 T 29-03-2018 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 SUPERFAMILY SSF52518 794 1166 3.21E-118 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Gene3D G3DSA:3.40.50.920 255 417 4.4E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 9.0E-16 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.1E-9 T 29-03-2018 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 SMART SM00890 622 679 8.5E-30 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Gene3D G3DSA:3.30.70.20 669 791 3.1E-29 T 29-03-2018 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.2E-8 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Pfam PF10371 Domain of unknown function 626 678 7.2E-23 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Gene3D G3DSA:4.10.780.10 634 668 2.2E-15 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 1.7E-32 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 SUPERFAMILY SSF54862 665 838 8.79E-23 T 29-03-2018 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 SUPERFAMILY SSF53323 419 668 1.44E-74 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Gene3D G3DSA:3.40.920.10 418 625 7.4E-53 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 PIRSF PIRSF000159 1 1175 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 SUPERFAMILY SSF52518 2 254 2.0E-72 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS28650 2e0891a12d9fd4c6c7262e0d45fcdd98 1175 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.0E-81 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 SUPERFAMILY SSF69349 371 577 4.55E-44 T 29-03-2018 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 225 447 3.4E-98 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 SUPERFAMILY SSF69255 297 381 4.18E-32 T 29-03-2018 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 Gene3D G3DSA:2.40.50.230 299 381 5.0E-37 T 29-03-2018 IPR006531 Gp5 N-terminal CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 SUPERFAMILY SSF69279 26 175 4.04E-44 T 29-03-2018 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 504 527 9.4E-8 T 29-03-2018 IPR010609 Gp5, C-terminal CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 Gene3D G3DSA:3.55.50.10 88 179 7.3E-34 T 29-03-2018 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 40 197 3.3E-40 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 228 430 3.3E-65 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 Pfam PF05954 Phage late control gene D protein (GPD) 27 215 3.8E-52 T 29-03-2018 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 Pfam PF05954 Phage late control gene D protein (GPD) 228 268 2.3E-7 T 29-03-2018 CKQ55_RS10135 f3a1eeb4d15274616b903a49ef36ebc1 610 SUPERFAMILY SSF69279 228 294 2.55E-15 T 29-03-2018 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 SUPERFAMILY SSF52218 63 207 5.91E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 2.2E-21 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 3.4E-30 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Gene3D G3DSA:3.40.50.80 442 598 1.1E-36 T 29-03-2018 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PIRSF PIRSF000207 1 599 8.7E-283 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00369 Flavodoxin signature 65 78 2.5E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00369 Flavodoxin signature 145 155 2.5E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00369 Flavodoxin signature 113 124 2.5E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 PRINTS PR00369 Flavodoxin signature 169 188 2.5E-14 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 SUPERFAMILY SSF52343 444 599 2.1E-52 T 29-03-2018 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 SUPERFAMILY SSF63380 227 446 2.98E-64 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Gene3D G3DSA:3.40.50.360 48 219 4.1E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Gene3D G3DSA:2.40.30.10 220 438 8.3E-48 T 29-03-2018 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 1.8E-283 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Pfam PF00258 Flavodoxin 67 195 7.8E-33 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 52.658 T 29-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CKQ55_RS18625 7d6d16c32ab6b4d5bb7b78d5e67a3ade 599 Pfam PF00667 FAD binding domain 230 424 1.7E-24 T 29-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 8.1E-15 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 308 1.0E-119 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 Pfam PF08544 GHMP kinases C terminal 212 283 2.1E-9 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.6E-33 T 29-03-2018 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.6E-33 T 29-03-2018 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.6E-33 T 29-03-2018 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.6E-33 T 29-03-2018 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.6E-33 T 29-03-2018 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 Gene3D G3DSA:3.30.70.890 168 309 1.1E-30 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 PIRSF PIRSF000676 1 309 2.6E-87 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 SUPERFAMILY SSF55060 172 289 1.01E-33 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 Gene3D G3DSA:3.30.230.10 1 167 3.8E-26 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 31.294 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CKQ55_RS08665 c422a60a79fa049a51e25305e4c9f3c1 309 SUPERFAMILY SSF54211 1 161 2.73E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.4E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 Gene3D G3DSA:3.40.190.10 89 177 3.4E-16 T 29-03-2018 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 Gene3D G3DSA:1.10.10.10 2 85 1.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 Gene3D G3DSA:3.40.190.10 178 265 5.0E-26 T 29-03-2018 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 SUPERFAMILY SSF53850 89 297 1.27E-48 T 29-03-2018 CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 SUPERFAMILY SSF46785 5 86 8.71E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13090 ae146518e59293290cf2bd0defe46c04 311 Pfam PF03466 LysR substrate binding domain 89 294 4.1E-47 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS13215 a1d06606f8a0b1abae9cae2e6c9222de 29 TIGRFAM TIGR04459 TisB_tox: type I toxin-antitoxin system toxin TisB 1 29 4.7E-20 T 29-03-2018 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 CKQ55_RS13215 a1d06606f8a0b1abae9cae2e6c9222de 29 Pfam PF13939 Toxin TisB, type I toxin-antitoxin system 1 26 5.6E-11 T 29-03-2018 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 CKQ55_RS29245 e5b9112691582470ca49d2de1e50ea90 232 SUPERFAMILY SSF161098 18 216 1.02E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29245 e5b9112691582470ca49d2de1e50ea90 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 224 2.9E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29245 e5b9112691582470ca49d2de1e50ea90 232 Gene3D G3DSA:1.10.3720.10 13 227 6.0E-26 T 29-03-2018 CKQ55_RS11880 e27294d12b75c7bfd9865fdbebc720e3 558 Pfam PF07690 Major Facilitator Superfamily 31 438 5.0E-29 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS11880 e27294d12b75c7bfd9865fdbebc720e3 558 Gene3D G3DSA:1.20.1250.20 287 554 1.4E-17 T 29-03-2018 CKQ55_RS11880 e27294d12b75c7bfd9865fdbebc720e3 558 SUPERFAMILY SSF103473 17 208 5.75E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS11880 e27294d12b75c7bfd9865fdbebc720e3 558 SUPERFAMILY SSF103473 276 446 5.75E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS11880 e27294d12b75c7bfd9865fdbebc720e3 558 Gene3D G3DSA:1.20.1250.20 17 210 2.7E-23 T 29-03-2018 CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 SMART SM00382 28 218 2.4E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 SMART SM00382 285 479 2.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 SUPERFAMILY SSF52540 4 225 1.92E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 Gene3D G3DSA:3.40.50.300 4 236 9.2E-32 T 29-03-2018 CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 Gene3D G3DSA:3.40.50.300 247 483 7.6E-41 T 29-03-2018 CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 SUPERFAMILY SSF52540 259 472 9.23E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 Pfam PF00005 ABC transporter 277 429 3.1E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03480 24be1b010263ebc138a500123b0936c0 489 Pfam PF00005 ABC transporter 23 163 4.5E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS31365 a95775058b4b774a56d07f249cc767df 310 Gene3D G3DSA:3.40.50.300 15 213 4.3E-13 T 29-03-2018 CKQ55_RS31365 a95775058b4b774a56d07f249cc767df 310 SUPERFAMILY SSF52540 30 285 1.94E-20 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31365 a95775058b4b774a56d07f249cc767df 310 Pfam PF05621 Bacterial TniB protein 26 279 6.8E-84 T 29-03-2018 IPR008868 Bacterial TniB CKQ55_RS31365 a95775058b4b774a56d07f249cc767df 310 SMART SM00382 59 207 1.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.2E-6 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 SMART SM00898 2 115 1.0E-51 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.173 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.0E-31 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.3E-31 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 SMART SM01232 129 221 2.7E-48 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 Gene3D G3DSA:1.10.8.50 131 269 2.3E-49 T 29-03-2018 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 SUPERFAMILY SSF46946 130 222 4.97E-31 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 SUPERFAMILY SSF81624 2 138 1.57E-43 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.2E-104 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 Gene3D G3DSA:3.20.190.10 1 130 2.9E-36 T 29-03-2018 CKQ55_RS13720 a376ddb525aae872ec5965ff23bc0135 269 SUPERFAMILY SSF57716 217 269 5.42E-16 T 29-03-2018 CKQ55_RS10635 f51ead2feba67af18861cbc445a8c99b 105 SUPERFAMILY SSF103481 5 103 6.15E-21 T 29-03-2018 CKQ55_RS10635 f51ead2feba67af18861cbc445a8c99b 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.5E-31 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CKQ55_RS06060 89bfdcda0e91ae199955740491eade09 284 Gene3D G3DSA:1.10.3080.10 36 284 2.7E-5 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS06060 89bfdcda0e91ae199955740491eade09 284 Pfam PF03824 High-affinity nickel-transport protein 13 277 3.9E-45 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 Pfam PF07687 Peptidase dimerisation domain 188 285 2.8E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 PIRSF PIRSF005962 1 392 6.6E-128 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 379 1.9E-106 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 Gene3D G3DSA:3.40.630.10 2 251 2.5E-48 T 29-03-2018 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 Gene3D G3DSA:3.40.630.10 252 392 3.0E-20 T 29-03-2018 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 SUPERFAMILY SSF55031 187 291 3.66E-28 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 Pfam PF01546 Peptidase family M20/M25/M40 75 388 5.8E-34 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 SUPERFAMILY SSF53187 301 390 8.49E-87 T 29-03-2018 CKQ55_RS05015 c5da737ed91f69464e9e7544ea7333bc 392 SUPERFAMILY SSF53187 5 200 8.49E-87 T 29-03-2018 CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 SMART SM00448 1 112 1.7E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 Gene3D G3DSA:1.10.10.10 122 223 8.5E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 SMART SM00862 145 216 4.0E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 Gene3D G3DSA:3.40.50.2300 1 121 6.4E-32 T 29-03-2018 CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 4.4E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS03305 a5b446091ed9248e64aefdbf9ea7faa1 223 SUPERFAMILY SSF52172 1 167 7.09E-36 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.2E-21 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 2.2E-21 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 2.2E-21 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.2E-21 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.2E-21 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 Gene3D G3DSA:3.50.50.60 246 307 1.5E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 Gene3D G3DSA:3.50.50.60 3 116 7.3E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 54.077 T 29-03-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 275 1.2E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 5.5E-13 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.5E-13 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 5.5E-13 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 5.5E-13 T 29-03-2018 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 Gene3D G3DSA:3.50.50.60 117 245 2.4E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19160 a0f5b793e149927654a412628b6a59b3 377 SUPERFAMILY SSF51905 5 300 4.39E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 Gene3D G3DSA:2.60.410.10 285 376 9.6E-19 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 Gene3D G3DSA:3.40.710.10 23 284 1.6E-45 T 29-03-2018 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 SMART SM00936 285 376 9.4E-31 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 265 5.3E-98 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 SUPERFAMILY SSF69189 285 378 2.16E-23 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.2E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.2E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.2E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 3.2E-21 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS02480 a7789766f4466b704e8649ebd4e567be 400 SUPERFAMILY SSF56601 12 285 1.92E-81 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 3.6E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 SUPERFAMILY SSF56935 514 657 1.34E-129 T 29-03-2018 CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 SUPERFAMILY SSF56935 30 483 1.34E-129 T 29-03-2018 CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 640 657 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 Gene3D G3DSA:2.170.130.10 23 158 1.4E-41 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 Pfam PF00593 TonB dependent receptor 231 656 1.7E-61 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS21755 fbbffd42210d85bf81ac6ac02661b31f 657 Gene3D G3DSA:2.40.170.20 162 657 1.4E-83 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS13575 461d0ab20cb5c8a342404847e09d5fcc 400 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.853 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CKQ55_RS13575 461d0ab20cb5c8a342404847e09d5fcc 400 Pfam PF03616 Sodium/glutamate symporter 2 366 1.4E-161 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CKQ55_RS13575 461d0ab20cb5c8a342404847e09d5fcc 400 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.4E-194 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CKQ55_RS26170 80ea8201d64b6cb92aec503b35046330 202 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 2 202 40.074 T 29-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 CKQ55_RS26170 80ea8201d64b6cb92aec503b35046330 202 Pfam PF02613 Nitrate reductase delta subunit 55 161 8.8E-23 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS26170 80ea8201d64b6cb92aec503b35046330 202 Gene3D G3DSA:1.10.3480.10 1 202 3.5E-54 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS26170 80ea8201d64b6cb92aec503b35046330 202 SUPERFAMILY SSF89155 6 201 1.44E-52 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS26170 80ea8201d64b6cb92aec503b35046330 202 PIRSF PIRSF004690 2 202 1.3E-59 T 29-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CKQ55_RS06355 0d77b815da20fc65c7b280f6ec53f461 324 Pfam PF00248 Aldo/keto reductase family 15 312 3.3E-74 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS06355 0d77b815da20fc65c7b280f6ec53f461 324 SUPERFAMILY SSF51430 1 321 7.86E-99 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS06355 0d77b815da20fc65c7b280f6ec53f461 324 Gene3D G3DSA:3.20.20.100 1 321 1.1E-96 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS29475 606f744b0f584b07e7f93c157736113c 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 9.7E-6 T 29-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS29475 606f744b0f584b07e7f93c157736113c 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 2.9E-58 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS29475 606f744b0f584b07e7f93c157736113c 196 Gene3D G3DSA:3.40.50.300 6 196 2.2E-70 T 29-03-2018 CKQ55_RS29475 606f744b0f584b07e7f93c157736113c 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 6.0E-80 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS29475 606f744b0f584b07e7f93c157736113c 196 PIRSF PIRSF015617 1 196 2.0E-68 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CKQ55_RS29475 606f744b0f584b07e7f93c157736113c 196 SUPERFAMILY SSF52540 7 196 4.04E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03525 1be9749080757e54fdf0fc312b0797e3 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 2.0E-50 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CKQ55_RS03525 1be9749080757e54fdf0fc312b0797e3 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 2.1E-70 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CKQ55_RS06310 800cbb9f84ccc4537ddc0caa972ed4e2 392 SUPERFAMILY SSF55347 149 327 7.03E-29 T 29-03-2018 CKQ55_RS06310 800cbb9f84ccc4537ddc0caa972ed4e2 392 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 277 6.9E-8 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS06310 800cbb9f84ccc4537ddc0caa972ed4e2 392 Gene3D G3DSA:3.30.360.10 161 392 8.3E-38 T 29-03-2018 CKQ55_RS06310 800cbb9f84ccc4537ddc0caa972ed4e2 392 SUPERFAMILY SSF51735 6 173 7.54E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS06310 800cbb9f84ccc4537ddc0caa972ed4e2 392 Gene3D G3DSA:3.40.50.720 1 160 2.2E-31 T 29-03-2018 CKQ55_RS06310 800cbb9f84ccc4537ddc0caa972ed4e2 392 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 2.8E-27 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 Pfam PF12833 Helix-turn-helix domain 27 105 3.7E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 SMART SM00342 21 104 1.7E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 SUPERFAMILY SSF46689 7 55 2.33E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 SUPERFAMILY SSF46689 58 107 1.93E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 3.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 3.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 Gene3D G3DSA:1.10.10.60 2 57 2.0E-14 T 29-03-2018 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 Gene3D G3DSA:1.10.10.60 58 113 1.1E-12 T 29-03-2018 CKQ55_RS28470 2bf3d8b8d2411f4edc874987d2929ace 124 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 SUPERFAMILY SSF46785 1 81 8.18E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 Gene3D G3DSA:3.40.190.10 178 264 1.0E-11 T 29-03-2018 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 Gene3D G3DSA:3.40.190.10 87 177 3.8E-10 T 29-03-2018 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 Pfam PF03466 LysR substrate binding domain 88 283 2.7E-27 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.4E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 SUPERFAMILY SSF53850 88 282 5.27E-27 T 29-03-2018 CKQ55_RS27545 872706884c0dfcf0107e897ad16e3798 301 Gene3D G3DSA:1.10.10.10 1 86 1.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14310 d8e8a4c066f049eaca8cae028d674374 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS14310 d8e8a4c066f049eaca8cae028d674374 309 SUPERFAMILY SSF53613 2 302 1.17E-72 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS14310 d8e8a4c066f049eaca8cae028d674374 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 2.0E-72 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS14310 d8e8a4c066f049eaca8cae028d674374 309 Gene3D G3DSA:3.40.1190.20 1 309 5.7E-58 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 409 3.9E-153 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 PIRSF PIRSF000141 1 416 6.5E-150 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 Gene3D G3DSA:3.50.50.60 1 416 5.9E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 SUPERFAMILY SSF51905 193 415 8.66E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 SUPERFAMILY SSF51905 1 35 8.66E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 Pfam PF00890 FAD binding domain 4 399 5.1E-50 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS21335 300cfc50c2fc66c1c877182fd750429d 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 44.446 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CKQ55_RS11320 1598f9cb96932fd6959ed818898f0589 164 Gene3D G3DSA:3.40.35.10 2 158 3.8E-58 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS11320 1598f9cb96932fd6959ed818898f0589 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 152 9.2E-70 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CKQ55_RS11320 1598f9cb96932fd6959ed818898f0589 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 3.1E-52 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS11320 1598f9cb96932fd6959ed818898f0589 164 SUPERFAMILY SSF52728 1 158 9.16E-54 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS14455 6da92900f40e3143e89bb64f81b2093f 254 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 2.1E-105 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CKQ55_RS14455 6da92900f40e3143e89bb64f81b2093f 254 Gene3D G3DSA:3.40.1630.10 3 56 1.3E-22 T 29-03-2018 CKQ55_RS14455 6da92900f40e3143e89bb64f81b2093f 254 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.745 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CKQ55_RS14455 6da92900f40e3143e89bb64f81b2093f 254 SUPERFAMILY SSF53335 10 246 1.38E-74 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS14455 6da92900f40e3143e89bb64f81b2093f 254 Gene3D G3DSA:3.40.50.150 57 253 1.6E-31 T 29-03-2018 CKQ55_RS15900 19688115bdb6af7d529a10412292b495 284 SUPERFAMILY SSF52540 2 151 6.47E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15900 19688115bdb6af7d529a10412292b495 284 Gene3D G3DSA:3.40.50.300 1 152 1.3E-11 T 29-03-2018 CKQ55_RS15900 19688115bdb6af7d529a10412292b495 284 Pfam PF03668 P-loop ATPase protein family 1 282 1.1E-145 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CKQ55_RS15900 19688115bdb6af7d529a10412292b495 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.045 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CKQ55_RS15900 19688115bdb6af7d529a10412292b495 284 PIRSF PIRSF005052 1 284 2.2E-114 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CKQ55_RS16415 b7d09975c995f8bcf82b34cb79d609b6 547 SUPERFAMILY SSF49899 340 539 7.91E-46 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS16415 b7d09975c995f8bcf82b34cb79d609b6 547 Gene3D G3DSA:2.60.120.200 337 537 2.9E-31 T 29-03-2018 CKQ55_RS16415 b7d09975c995f8bcf82b34cb79d609b6 547 SUPERFAMILY SSF75005 2 320 1.33E-87 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS16415 b7d09975c995f8bcf82b34cb79d609b6 547 Gene3D G3DSA:2.115.10.20 1 335 2.6E-70 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS16415 b7d09975c995f8bcf82b34cb79d609b6 547 Pfam PF04616 Glycosyl hydrolases family 43 2 313 5.0E-86 T 29-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CKQ55_RS15180 1de9948ff7f1bc244e293fd4ecb961dc 72 SUPERFAMILY SSF118001 1 70 3.92E-30 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CKQ55_RS15180 1de9948ff7f1bc244e293fd4ecb961dc 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 7.8E-37 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CKQ55_RS15180 1de9948ff7f1bc244e293fd4ecb961dc 72 Gene3D G3DSA:1.10.10.610 1 71 2.3E-37 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CKQ55_RS15180 1de9948ff7f1bc244e293fd4ecb961dc 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.562 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CKQ55_RS15180 1de9948ff7f1bc244e293fd4ecb961dc 72 PIRSF PIRSF006169 1 72 2.7E-38 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CKQ55_RS15180 1de9948ff7f1bc244e293fd4ecb961dc 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 4.0E-29 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CKQ55_RS12870 accf9e040af6144dbcf6979761538837 482 Gene3D G3DSA:3.40.50.410 298 460 5.2E-20 T 29-03-2018 IPR002035 von Willebrand factor, type A CKQ55_RS12870 accf9e040af6144dbcf6979761538837 482 SUPERFAMILY SSF53300 317 453 7.87E-17 T 29-03-2018 IPR002035 von Willebrand factor, type A CKQ55_RS12870 accf9e040af6144dbcf6979761538837 482 SMART SM00327 318 482 1.4E-6 T 29-03-2018 IPR002035 von Willebrand factor, type A CKQ55_RS12870 accf9e040af6144dbcf6979761538837 482 Pfam PF05762 VWA domain containing CoxE-like protein 304 456 1.9E-9 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like CKQ55_RS12870 accf9e040af6144dbcf6979761538837 482 Hamap MF_01626 Protein ViaA [viaA]. 1 482 56.555 T 29-03-2018 IPR023481 Uncharacterised protein family ViaA CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Gene3D G3DSA:3.40.50.300 319 492 1.8E-19 T 29-03-2018 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 SUPERFAMILY SSF55785 198 296 5.14E-6 T 29-03-2018 IPR000014 PAS domain CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Gene3D G3DSA:3.30.450.20 192 303 1.3E-7 T 29-03-2018 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 SMART SM00382 343 484 4.8E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Pfam PF02954 Bacterial regulatory protein, Fis family 585 624 5.1E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 406 421 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 SMART SM00091 199 265 1.4E-4 T 29-03-2018 IPR000014 PAS domain CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Gene3D G3DSA:1.10.10.60 561 627 1.3E-14 T 29-03-2018 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Pfam PF00989 PAS fold 200 302 1.1E-13 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 SUPERFAMILY SSF46689 579 627 6.09E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 SUPERFAMILY SSF52540 327 563 3.12E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Gene3D G3DSA:1.10.8.60 493 560 8.4E-13 T 29-03-2018 CKQ55_RS16615 2cac0aca21375710ce71b390721603d6 637 Pfam PF00158 Sigma-54 interaction domain 326 486 1.2E-35 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS18780 2779578f1bb49a652cf75084b765109f 475 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 2.2E-126 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CKQ55_RS18780 2779578f1bb49a652cf75084b765109f 475 SUPERFAMILY SSF143968 312 467 9.55E-41 T 29-03-2018 CKQ55_RS18780 2779578f1bb49a652cf75084b765109f 475 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 71.008 T 29-03-2018 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 KEGG: 00627+4.1.1.61 CKQ55_RS18780 2779578f1bb49a652cf75084b765109f 475 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 416 1.8E-105 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CKQ55_RS18780 2779578f1bb49a652cf75084b765109f 475 Gene3D G3DSA:3.40.1670.10 311 453 1.3E-32 T 29-03-2018 CKQ55_RS18780 2779578f1bb49a652cf75084b765109f 475 SUPERFAMILY SSF50475 3 309 1.49E-81 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS16595 59a1d26ba753ac62739f4cc853acfbe9 210 SUPERFAMILY SSF101473 2 205 6.28E-57 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16595 59a1d26ba753ac62739f4cc853acfbe9 210 SMART SM01120 32 206 3.8E-79 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16595 59a1d26ba753ac62739f4cc853acfbe9 210 Pfam PF02734 DAK2 domain 32 205 1.9E-55 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CKQ55_RS16595 59a1d26ba753ac62739f4cc853acfbe9 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.2E-79 T 29-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 CKQ55_RS09085 3943de96728df82ed17cefee20f451c9 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 84 265 2.2E-6 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09085 3943de96728df82ed17cefee20f451c9 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 9.7E-140 T 29-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 CKQ55_RS09085 3943de96728df82ed17cefee20f451c9 267 Gene3D G3DSA:3.90.850.10 1 267 8.4E-46 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS09085 3943de96728df82ed17cefee20f451c9 267 SUPERFAMILY SSF56529 2 267 1.31E-76 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Gene3D G3DSA:1.10.8.60 343 547 2.9E-45 T 29-03-2018 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.8E-13 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.9E-11 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 4.3E-28 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Gene3D G3DSA:1.10.8.60 766 856 2.0E-23 T 29-03-2018 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Gene3D G3DSA:1.10.1780.10 1 151 4.9E-32 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 SMART SM00382 198 344 7.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 SMART SM00382 597 742 1.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 SUPERFAMILY SSF52540 546 853 1.71E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.3E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 SUPERFAMILY SSF81923 4 156 9.16E-42 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Gene3D G3DSA:3.40.50.300 552 765 1.0E-54 T 29-03-2018 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Gene3D G3DSA:3.40.50.300 157 342 2.3E-25 T 29-03-2018 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 SMART SM01086 766 855 7.3E-38 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 SUPERFAMILY SSF52540 159 545 1.21E-99 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CKQ55_RS19820 55d91f05e2e1b83a1b0a8ea20d3e1b2f 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.3E-55 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS29075 b21868ed9e799e852c3eba406ef05be3 391 SUPERFAMILY SSF69572 13 350 2.22E-103 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS29075 b21868ed9e799e852c3eba406ef05be3 391 Pfam PF00899 ThiF family 23 256 4.9E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS29075 b21868ed9e799e852c3eba406ef05be3 391 Gene3D G3DSA:3.40.50.720 12 261 5.1E-75 T 29-03-2018 CKQ55_RS29075 b21868ed9e799e852c3eba406ef05be3 391 SMART SM00450 290 386 1.8E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29075 b21868ed9e799e852c3eba406ef05be3 391 Pfam PF00581 Rhodanese-like domain 291 382 8.0E-7 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29075 b21868ed9e799e852c3eba406ef05be3 391 Gene3D G3DSA:3.40.250.10 283 390 5.0E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS19120 56622eb9731776c910e5a18b95d22298 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 3.0E-65 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CKQ55_RS19120 56622eb9731776c910e5a18b95d22298 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 3.1E-56 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 SMART SM00448 5 115 2.9E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 SMART SM00862 157 230 8.6E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 Gene3D G3DSA:1.10.10.10 126 234 1.5E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 Gene3D G3DSA:3.40.50.2300 2 125 8.6E-33 T 29-03-2018 CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 SUPERFAMILY SSF52172 4 129 6.83E-38 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 Pfam PF00072 Response regulator receiver domain 7 115 3.7E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 230 4.8E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS01470 d2d42c4a75b8f81b0870a6e82dff7d2f 234 SUPERFAMILY SSF46894 152 230 2.01E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 Gene3D G3DSA:3.40.50.300 475 703 4.2E-52 T 29-03-2018 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 Pfam PF00664 ABC transporter transmembrane region 169 431 1.2E-10 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 SUPERFAMILY SSF90123 166 447 1.11E-32 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 ProSitePatterns PS00211 ABC transporters family signature. 616 630 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 SUPERFAMILY SSF52540 477 695 9.4E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 SMART SM00382 504 692 1.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 Pfam PF00005 ABC transporter 495 644 2.0E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 Gene3D G3DSA:3.90.70.10 8 137 1.3E-22 T 29-03-2018 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 Pfam PF03412 Peptidase C39 family 8 133 1.2E-22 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CKQ55_RS18855 1ad4382721f5e20721d4b6994a4bf23e 703 Gene3D G3DSA:1.20.1560.10 160 449 2.0E-20 T 29-03-2018 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 SUPERFAMILY SSF48256 11 422 3.53E-168 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 Gene3D G3DSA:1.10.230.10 282 379 2.5E-37 T 29-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 8.8E-243 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 PIRSF PIRSF001369 38 427 2.1E-175 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 2.1E-131 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS03760 444221fc79e369f148914776c36001c8 427 Gene3D G3DSA:1.10.580.10 28 281 2.7E-87 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 PIRSF PIRSF000194 1 159 2.3E-57 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 29-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 Pfam PF00186 Dihydrofolate reductase 1 158 8.1E-59 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 SUPERFAMILY SSF53597 1 159 6.15E-56 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 3.2E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 3.2E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 3.2E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 3.2E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CKQ55_RS08390 d7f138a94201d662e7d8cfda4e8d7aee 159 Gene3D G3DSA:3.40.430.10 1 159 2.0E-52 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS06320 64153083b4ca2c0577175c5a9b2523a3 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 2.5E-65 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CKQ55_RS06320 64153083b4ca2c0577175c5a9b2523a3 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.358 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CKQ55_RS06320 64153083b4ca2c0577175c5a9b2523a3 163 SUPERFAMILY SSF89963 91 163 2.22E-29 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CKQ55_RS06320 64153083b4ca2c0577175c5a9b2523a3 163 Gene3D G3DSA:3.30.70.860 98 162 1.7E-34 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CKQ55_RS06320 64153083b4ca2c0577175c5a9b2523a3 163 SUPERFAMILY SSF89963 2 89 5.62E-31 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CKQ55_RS06320 64153083b4ca2c0577175c5a9b2523a3 163 Gene3D G3DSA:3.30.70.990 10 97 3.2E-30 T 29-03-2018 IPR035570 UPF0234 N-terminal domain CKQ55_RS00695 5694a5d0f517ac29f387938a31248a57 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 54.48 T 29-03-2018 IPR022987 Uncharacterised protein family UPF0227 CKQ55_RS00695 5694a5d0f517ac29f387938a31248a57 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.2E-69 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CKQ55_RS00695 5694a5d0f517ac29f387938a31248a57 180 SUPERFAMILY SSF53474 2 176 3.43E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS19690 a6b9ca216dd46f60208b8d949ece48a6 158 Gene3D G3DSA:3.30.530.20 14 157 1.2E-30 T 29-03-2018 IPR023393 START-like domain CKQ55_RS19690 a6b9ca216dd46f60208b8d949ece48a6 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 3.0E-30 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CKQ55_RS19690 a6b9ca216dd46f60208b8d949ece48a6 158 SUPERFAMILY SSF55961 14 155 1.78E-33 T 29-03-2018 CKQ55_RS16720 676e48d6dc47d7ca82ff8ada137de20f 206 Pfam PF08239 Bacterial SH3 domain 35 85 1.6E-9 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CKQ55_RS16720 676e48d6dc47d7ca82ff8ada137de20f 206 Gene3D G3DSA:2.30.30.410 13 90 3.5E-11 T 29-03-2018 CKQ55_RS16720 676e48d6dc47d7ca82ff8ada137de20f 206 SMART SM00287 23 89 4.3E-14 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CKQ55_RS16720 676e48d6dc47d7ca82ff8ada137de20f 206 Gene3D G3DSA:1.20.5.50 91 170 2.8E-6 T 29-03-2018 CKQ55_RS16720 676e48d6dc47d7ca82ff8ada137de20f 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 6.5E-53 T 29-03-2018 IPR016476 SH3 domain protein CKQ55_RS16720 676e48d6dc47d7ca82ff8ada137de20f 206 PIRSF PIRSF006158 1 205 8.0E-71 T 29-03-2018 IPR016476 SH3 domain protein CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 SMART SM00354 9 79 2.0E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 SUPERFAMILY SSF47413 8 67 1.21E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 5.2E-11 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 333 2.5E-38 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 SUPERFAMILY SSF53822 69 338 1.05E-77 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 Gene3D G3DSA:1.10.260.40 10 63 2.1E-14 T 29-03-2018 CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 Gene3D G3DSA:3.40.50.2300 183 314 4.8E-44 T 29-03-2018 CKQ55_RS27060 44b98a0ade372d6e72816f2df6e7a12a 340 Gene3D G3DSA:3.40.50.2300 64 182 2.8E-34 T 29-03-2018 CKQ55_RS14710 25cc77a14bb3cb4989937336a78736df 185 Gene3D G3DSA:3.40.1000.10 43 185 2.8E-16 T 29-03-2018 CKQ55_RS14710 25cc77a14bb3cb4989937336a78736df 185 Pfam PF08786 DcrB 51 181 1.3E-30 T 29-03-2018 IPR014894 Protein DcrB CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.846 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 Gene3D G3DSA:3.20.20.150 2 440 4.5E-112 T 29-03-2018 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 133 153 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 180 201 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 229 253 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 156 175 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 207 226 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 271 298 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 300 311 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 333 344 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 PRINTS PR00688 Xylose isomerase signature 92 114 9.2E-86 T 29-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 SUPERFAMILY SSF51658 4 438 2.49E-174 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS14025 44b6c449d8b6a869da67875901bc5c2a 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 7.5E-220 T 29-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.6E-22 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 29-03-2018 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CKQ55_RS24785 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CKQ55_RS12055 c7b3fb62d54e1b0e6eed91b4d3a842b8 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CKQ55_RS12055 c7b3fb62d54e1b0e6eed91b4d3a842b8 93 Gene3D G3DSA:3.10.50.40 2 90 5.2E-29 T 29-03-2018 CKQ55_RS12055 c7b3fb62d54e1b0e6eed91b4d3a842b8 93 Pfam PF13616 PPIC-type PPIASE domain 14 90 5.7E-21 T 29-03-2018 CKQ55_RS12055 c7b3fb62d54e1b0e6eed91b4d3a842b8 93 SUPERFAMILY SSF54534 5 90 1.11E-26 T 29-03-2018 CKQ55_RS19115 5c5a2e57eceb1dac12c35171b90d3a5e 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19115 5c5a2e57eceb1dac12c35171b90d3a5e 255 Gene3D G3DSA:3.40.50.700 22 179 1.3E-26 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19115 5c5a2e57eceb1dac12c35171b90d3a5e 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19115 5c5a2e57eceb1dac12c35171b90d3a5e 255 SUPERFAMILY SSF56770 36 169 4.45E-50 T 29-03-2018 CKQ55_RS14520 00e52230e45e76f82fe57ed259249cd2 185 Pfam PF07274 Protein of unknown function (DUF1440) 20 163 5.0E-44 T 29-03-2018 IPR009898 Protein of unknown function DUF1440 CKQ55_RS12695 9ee172246be75de2e0caaf0630ba6687 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.1E-74 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CKQ55_RS12695 9ee172246be75de2e0caaf0630ba6687 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.1E-53 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CKQ55_RS12695 9ee172246be75de2e0caaf0630ba6687 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.883 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CKQ55_RS12695 9ee172246be75de2e0caaf0630ba6687 145 Gene3D G3DSA:3.50.80.10 1 145 5.6E-55 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CKQ55_RS12695 9ee172246be75de2e0caaf0630ba6687 145 SUPERFAMILY SSF69500 1 144 2.35E-56 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 PIRSF PIRSF036687 1 858 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.8E-58 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Gene3D G3DSA:3.20.19.10 162 364 1.2E-31 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Gene3D G3DSA:3.40.1060.10 522 682 5.0E-28 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 1.7E-89 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 SUPERFAMILY SSF52016 162 372 1.29E-64 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 SUPERFAMILY SSF74778 1 160 1.57E-57 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Gene3D G3DSA:3.30.499.10 402 521 4.5E-9 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 852 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Pfam PF00330 Aconitase family (aconitate hydratase) 466 817 1.4E-40 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 Gene3D G3DSA:3.30.499.10 683 864 2.2E-47 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 SUPERFAMILY SSF53732 380 853 3.14E-141 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS01505 e1c9caf8bb69a2def592754b13cd7ff7 866 ProSitePatterns PS01244 Aconitase family signature 2. 760 773 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 SUPERFAMILY SSF52821 32 126 2.16E-7 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 SUPERFAMILY SSF52821 290 429 1.17E-29 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 Gene3D G3DSA:3.40.250.10 284 435 1.2E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 Gene3D G3DSA:3.40.250.10 139 283 1.7E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 Pfam PF00581 Rhodanese-like domain 297 418 3.2E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 Pfam PF00581 Rhodanese-like domain 181 263 6.5E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 SUPERFAMILY SSF52821 141 275 1.96E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 Gene3D G3DSA:3.40.250.10 21 132 9.5E-6 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 SMART SM00450 26 139 5.2 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 SMART SM00450 294 422 1.6E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29760 e4917ab390b55a3bfe41e087506f7b29 435 SMART SM00450 146 267 3.3E-15 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 SUPERFAMILY SSF52335 7 197 3.79E-72 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 2.0E-120 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 SMART SM00851 19 132 1.4E-62 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.506 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 Gene3D G3DSA:3.40.140.20 376 519 1.1E-52 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 SUPERFAMILY SSF53927 221 529 6.12E-131 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.2E-268 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 Gene3D G3DSA:3.40.50.1380 1 196 1.3E-78 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 PIRSF PIRSF000414 1 529 2.7E-228 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 Pfam PF02142 MGS-like domain 19 132 7.0E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 SMART SM00798 137 461 9.5E-218 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS11435 290c85ce89ede134f7b405d9fa023d04 529 Gene3D G3DSA:3.40.140.20 226 375 2.0E-56 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS21385 9eb89c532853bf3d2921ceb0c24c7ce5 242 SUPERFAMILY SSF53335 18 224 5.63E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS21385 9eb89c532853bf3d2921ceb0c24c7ce5 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.059 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CKQ55_RS21385 9eb89c532853bf3d2921ceb0c24c7ce5 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 1.6E-89 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CKQ55_RS21385 9eb89c532853bf3d2921ceb0c24c7ce5 242 Gene3D G3DSA:3.40.50.150 2 241 2.7E-45 T 29-03-2018 CKQ55_RS21385 9eb89c532853bf3d2921ceb0c24c7ce5 242 Pfam PF13489 Methyltransferase domain 57 171 9.7E-24 T 29-03-2018 CKQ55_RS05880 83598c52b9d580dd4849e30facf37ab7 558 Gene3D G3DSA:3.40.50.720 417 550 2.5E-16 T 29-03-2018 CKQ55_RS05880 83598c52b9d580dd4849e30facf37ab7 558 Gene3D G3DSA:1.20.91.10 239 321 1.6E-6 T 29-03-2018 CKQ55_RS05880 83598c52b9d580dd4849e30facf37ab7 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 1.1E-76 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CKQ55_RS05880 83598c52b9d580dd4849e30facf37ab7 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 2.1E-77 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CKQ55_RS05880 83598c52b9d580dd4849e30facf37ab7 558 SUPERFAMILY SSF51735 418 550 3.47E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05880 83598c52b9d580dd4849e30facf37ab7 558 Pfam PF02254 TrkA-N domain 421 534 1.9E-23 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 SUPERFAMILY SSF54713 142 281 2.51E-53 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 1.0E-120 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 Gene3D G3DSA:3.30.479.20 58 147 2.7E-14 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 29-03-2018 IPR009060 UBA-like GO:0005515 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 Pfam PF00889 Elongation factor TS 71 263 2.7E-66 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 79.68 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 Gene3D G3DSA:1.10.8.10 1 56 1.0E-23 T 29-03-2018 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 Gene3D G3DSA:3.30.479.20 148 279 5.8E-49 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS07610 9745e4e90a9b1d365b4b92bb8c6457ac 283 SUPERFAMILY SSF54713 56 139 1.72E-20 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 SUPERFAMILY SSF52096 322 439 5.42E-43 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 SUPERFAMILY SSF52096 467 529 5.42E-43 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 SUPERFAMILY SSF52096 34 180 5.77E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 SUPERFAMILY SSF52096 211 286 5.77E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 1.7E-53 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.6E-259 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 Gene3D G3DSA:3.40.1750.10 200 292 3.5E-24 T 29-03-2018 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 Pfam PF01343 Peptidase family S49 391 542 3.8E-51 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 Pfam PF01343 Peptidase family S49 140 297 8.3E-44 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 Gene3D G3DSA:3.90.226.10 318 611 3.0E-52 T 29-03-2018 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 Gene3D G3DSA:3.20.20.80 32 199 0.2 T 29-03-2018 CKQ55_RS29810 831fd4f8c2e4915d989cba2916ec2595 617 PIRSF PIRSF001217 8 617 4.4E-227 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 Gene3D G3DSA:1.20.89.10 277 346 1.7E-21 T 29-03-2018 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 SUPERFAMILY SSF53807 7 446 7.2E-118 T 29-03-2018 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 Gene3D G3DSA:3.40.50.1980 353 443 7.5E-11 T 29-03-2018 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 2 432 3.7E-211 T 29-03-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0006461|GO:0009399 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 Gene3D G3DSA:3.40.50.1980 19 165 3.4E-36 T 29-03-2018 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 Gene3D G3DSA:3.40.50.1980 166 276 4.9E-26 T 29-03-2018 CKQ55_RS22845 3ab278774a403367b5af75edee5191ef 461 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 20 430 1.3E-91 T 29-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 4.7E-122 T 29-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 340 36.214 T 29-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 Gene3D G3DSA:3.40.50.10470 131 336 6.1E-67 T 29-03-2018 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 Pfam PF01008 Initiation factor 2 subunit family 48 329 4.6E-70 T 29-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 Gene3D G3DSA:1.20.120.420 2 130 1.3E-31 T 29-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 329 6.0E-94 T 29-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CKQ55_RS04350 85905f92df26d69a5d438e9447ab55e3 342 SUPERFAMILY SSF100950 8 333 1.59E-105 T 29-03-2018 CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 SUPERFAMILY SSF55594 4 90 4.19E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 1.4E-21 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.4E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 2.4E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.4E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 Gene3D G3DSA:3.30.1340.10 1 84 1.5E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS15895 c6174cda1db9d822f00169303893f302 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 4.5E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS04995 c29d694c0612d97f26852e8edaed8cac 458 Pfam PF00324 Amino acid permease 26 450 4.1E-118 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS04995 c29d694c0612d97f26852e8edaed8cac 458 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS04995 c29d694c0612d97f26852e8edaed8cac 458 PIRSF PIRSF006060 1 455 1.2E-77 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 7.6E-64 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 Gene3D G3DSA:3.30.70.580 62 150 2.5E-17 T 29-03-2018 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 SUPERFAMILY SSF55120 69 234 3.5E-43 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 Gene3D G3DSA:3.10.290.10 1 61 1.2E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 SUPERFAMILY SSF55174 5 98 9.86E-13 T 29-03-2018 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 Pfam PF01479 S4 domain 4 43 2.5E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 SMART SM00363 3 74 5.6E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 Pfam PF00849 RNA pseudouridylate synthase 69 199 3.0E-16 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS29495 2a032483244d06b0a196bd54b4de6270 295 Gene3D G3DSA:3.30.70.1560 151 219 2.0E-22 T 29-03-2018 CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 Gene3D G3DSA:3.40.47.10 263 413 1.1E-52 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.6E-64 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 SMART SM00825 Beta-ketoacyl synthase 6 413 6.4E-15 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.6E-39 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 PIRSF PIRSF000447 1 413 6.4E-204 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 Gene3D G3DSA:3.40.47.10 6 260 2.2E-82 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 SUPERFAMILY SSF53901 215 412 8.46E-74 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 SUPERFAMILY SSF53901 4 252 1.1E-77 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00765 26213375131972cf28365a5fa162af21 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 9.0E-196 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10390 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 Gene3D G3DSA:3.40.50.300 1 257 1.8E-44 T 29-03-2018 CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 Gene3D G3DSA:3.40.50.300 258 488 4.3E-35 T 29-03-2018 CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 Pfam PF00005 ABC transporter 271 425 5.8E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 Pfam PF00005 ABC transporter 14 166 6.9E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 SUPERFAMILY SSF52540 3 226 1.71E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 SMART SM00382 23 220 9.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 SMART SM00382 280 484 0.51 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04280 296343b289afea0e8ac53a4e090ef81e 501 SUPERFAMILY SSF52540 266 483 8.36E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.9E-189 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 1.4E-172 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 Gene3D G3DSA:1.20.5.570 460 487 4.7E-19 T 29-03-2018 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 ProDom PD024571 NODULATION TRANSFERASE NODZ GLYCOSYLTRANSFERASE PLASMID Z 2.4.1.- PROBABLE FUCOSYLTRANSFERASE PROTEIN 396 484 0.004 T 29-03-2018 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.752 T 29-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 Gene3D G3DSA:3.40.1670.10 323 459 3.1E-52 T 29-03-2018 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 SUPERFAMILY SSF50475 3 322 8.24E-128 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS11710 04740a29624e48fe93ca79d03cebce59 489 SUPERFAMILY SSF143968 323 486 6.67E-67 T 29-03-2018 CKQ55_RS25325 df67c9adffff748e2fe8ad16914b1773 356 SUPERFAMILY SSF50331 243 336 2.76E-8 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS25325 df67c9adffff748e2fe8ad16914b1773 356 Gene3D G3DSA:3.40.50.300 3 266 1.3E-73 T 29-03-2018 CKQ55_RS25325 df67c9adffff748e2fe8ad16914b1773 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS25325 df67c9adffff748e2fe8ad16914b1773 356 Pfam PF00005 ABC transporter 19 167 1.3E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS25325 df67c9adffff748e2fe8ad16914b1773 356 SMART SM00382 28 217 5.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS25325 df67c9adffff748e2fe8ad16914b1773 356 SUPERFAMILY SSF52540 4 249 1.28E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 SMART SM00965 58 109 8.4E-10 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 136 778 1.3E-157 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 Pfam PF00593 TonB dependent receptor 333 776 4.0E-49 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 Gene3D G3DSA:2.170.130.10 132 259 3.9E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 SUPERFAMILY SSF56935 121 778 1.31E-121 T 29-03-2018 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 Pfam PF07660 Secretin and TonB N terminus short domain 60 107 2.1E-7 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 761 778 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 Gene3D G3DSA:2.40.170.20 260 778 4.0E-85 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS30025 c9a622e06298e4d2d5aa5607df263317 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 136 248 5.7E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS24940 cb8ce490989140e278464d144b40e31a 406 Gene3D G3DSA:3.90.1150.10 284 401 1.4E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS24940 cb8ce490989140e278464d144b40e31a 406 Gene3D G3DSA:3.40.640.10 34 283 2.5E-60 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS24940 cb8ce490989140e278464d144b40e31a 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CKQ55_RS24940 cb8ce490989140e278464d144b40e31a 406 SUPERFAMILY SSF53383 4 402 1.77E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS24940 cb8ce490989140e278464d144b40e31a 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.5E-181 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CKQ55_RS24940 cb8ce490989140e278464d144b40e31a 406 Pfam PF00266 Aminotransferase class-V 26 394 5.9E-152 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS25475 1898790d3b8d26fcc8c25f1667cb85fa 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 130 1.1E-42 T 29-03-2018 IPR016052 Bacteriophage 933W, L0136 CKQ55_RS25475 1898790d3b8d26fcc8c25f1667cb85fa 130 Gene3D G3DSA:2.40.50.200 21 130 1.8E-21 T 29-03-2018 CKQ55_RS25475 1898790d3b8d26fcc8c25f1667cb85fa 130 SUPERFAMILY SSF101756 30 130 6.02E-27 T 29-03-2018 IPR005220 Bacterial OB-fold CKQ55_RS25475 1898790d3b8d26fcc8c25f1667cb85fa 130 Pfam PF04076 Bacterial OB fold (BOF) protein 30 130 1.8E-34 T 29-03-2018 IPR005220 Bacterial OB-fold CKQ55_RS19580 e9a67a1649f2416ad5f9a5e1b099724c 282 Pfam PF01261 Xylose isomerase-like TIM barrel 32 190 6.0E-9 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS19580 e9a67a1649f2416ad5f9a5e1b099724c 282 Gene3D G3DSA:3.20.20.150 1 259 3.5E-26 T 29-03-2018 CKQ55_RS19580 e9a67a1649f2416ad5f9a5e1b099724c 282 SUPERFAMILY SSF51658 9 196 4.04E-20 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS30540 eb7b7f3eff2e76e1c7012450d178c391 250 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 13 249 6.6E-92 T 29-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF CKQ55_RS30540 eb7b7f3eff2e76e1c7012450d178c391 250 Gene3D G3DSA:3.40.30.10 19 244 0.0011 T 29-03-2018 CKQ55_RS30540 eb7b7f3eff2e76e1c7012450d178c391 250 Pfam PF13728 F plasmid transfer operon protein 26 239 1.2E-63 T 29-03-2018 CKQ55_RS06490 e531e81f05c47aefc064a9dc1717d034 456 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS06490 e531e81f05c47aefc064a9dc1717d034 456 Pfam PF00324 Amino acid permease 15 451 2.5E-107 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS06490 e531e81f05c47aefc064a9dc1717d034 456 PIRSF PIRSF006060 1 455 4.1E-77 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 SUPERFAMILY SSF46689 59 107 2.15E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 SUPERFAMILY SSF46689 6 56 6.57E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 SMART SM00342 22 105 2.9E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 Gene3D G3DSA:1.10.10.60 3 58 1.5E-13 T 29-03-2018 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 Pfam PF12833 Helix-turn-helix domain 28 106 4.7E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS17530 36a358ec4c71a128002fef8507242906 122 Gene3D G3DSA:1.10.10.60 60 120 3.7E-11 T 29-03-2018 CKQ55_RS18215 53c4aadeb3c6477185271851d7a0c435 91 SUPERFAMILY SSF159133 1 89 6.67E-27 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS18215 53c4aadeb3c6477185271851d7a0c435 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 4.0E-16 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS18215 53c4aadeb3c6477185271851d7a0c435 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 3.9E-30 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS18215 53c4aadeb3c6477185271851d7a0c435 91 Gene3D G3DSA:2.40.50.220 1 91 3.6E-31 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS11240 e1473d859991489829d413e48a4a0c6f 125 Pfam PF01042 Endoribonuclease L-PSP 6 124 1.9E-42 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS11240 e1473d859991489829d413e48a4a0c6f 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 29-03-2018 IPR019897 RidA, conserved site CKQ55_RS11240 e1473d859991489829d413e48a4a0c6f 125 SUPERFAMILY SSF55298 2 124 6.28E-41 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS11240 e1473d859991489829d413e48a4a0c6f 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 1.0E-49 T 29-03-2018 IPR006056 RidA family CKQ55_RS11240 e1473d859991489829d413e48a4a0c6f 125 Gene3D G3DSA:3.30.1330.40 1 125 1.3E-42 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS16170 6f6288f3c08e02ee970540a493903a15 172 Gene3D G3DSA:3.40.50.880 1 172 9.0E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS16170 6f6288f3c08e02ee970540a493903a15 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 2.0E-64 T 29-03-2018 IPR006286 Peptidase C56, PfpI CKQ55_RS16170 6f6288f3c08e02ee970540a493903a15 172 Pfam PF01965 DJ-1/PfpI family 3 167 2.7E-53 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS16170 6f6288f3c08e02ee970540a493903a15 172 SUPERFAMILY SSF52317 3 170 4.73E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS20985 70645a2c996dd48cc6b8a2efb0f18aba 257 SMART SM00382 30 229 4.4E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS20985 70645a2c996dd48cc6b8a2efb0f18aba 257 Gene3D G3DSA:3.40.50.300 1 256 6.4E-72 T 29-03-2018 CKQ55_RS20985 70645a2c996dd48cc6b8a2efb0f18aba 257 Pfam PF00005 ABC transporter 21 181 4.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS20985 70645a2c996dd48cc6b8a2efb0f18aba 257 SUPERFAMILY SSF52540 6 251 2.48E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20985 70645a2c996dd48cc6b8a2efb0f18aba 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS20985 70645a2c996dd48cc6b8a2efb0f18aba 257 PIRSF PIRSF039085 2 257 1.0E-121 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 155 0.0033 T 29-03-2018 CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 230 7.5E-32 T 29-03-2018 CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 4.8E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 4.8E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.8E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.8E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 Gene3D G3DSA:3.40.50.720 9 236 4.6E-46 T 29-03-2018 CKQ55_RS23180 cf0a1efe1a2f525b3274b2dfd84b28cd 236 SUPERFAMILY SSF51735 10 233 1.0E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26195 6fe6ec493fbc39548cba6fec4a2987f0 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 1.0E-85 T 29-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CKQ55_RS26195 6fe6ec493fbc39548cba6fec4a2987f0 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 236 1.1E-113 T 29-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CKQ55_RS26195 6fe6ec493fbc39548cba6fec4a2987f0 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 2 236 39.493 T 29-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 2.3E-56 T 29-03-2018 CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.1E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.1E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.1E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.1E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 9.1E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.1E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.8E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 Gene3D G3DSA:3.40.50.720 52 258 8.9E-56 T 29-03-2018 CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 Gene3D G3DSA:3.40.50.10090 1 51 1.2E-8 T 29-03-2018 CKQ55_RS19490 d8899d176ce75c6bf34bbe2c32e0d823 258 SUPERFAMILY SSF51735 7 254 1.03E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05120 e6c87770d32563780a8a1a199ff14e71 335 Gene3D G3DSA:3.30.360.10 133 335 1.2E-35 T 29-03-2018 CKQ55_RS05120 e6c87770d32563780a8a1a199ff14e71 335 SUPERFAMILY SSF55347 128 286 8.83E-26 T 29-03-2018 CKQ55_RS05120 e6c87770d32563780a8a1a199ff14e71 335 SUPERFAMILY SSF51735 4 149 2.73E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05120 e6c87770d32563780a8a1a199ff14e71 335 Gene3D G3DSA:3.40.50.720 2 132 1.1E-33 T 29-03-2018 CKQ55_RS05120 e6c87770d32563780a8a1a199ff14e71 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 5.9E-21 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS05120 e6c87770d32563780a8a1a199ff14e71 335 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 237 3.6E-7 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS22400 2fc9b0df80404aa1992c99d98893c894 159 PIRSF PIRSF029208 1 154 2.5E-62 T 29-03-2018 IPR016912 Bacteriophage P2, GpU CKQ55_RS22400 2fc9b0df80404aa1992c99d98893c894 159 Pfam PF06995 Phage P2 GpU 6 125 1.7E-44 T 29-03-2018 IPR009734 Myoviridae, GpU CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 4.3E-11 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.7E-57 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 SUPERFAMILY SSF54980 302 387 4.32E-15 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 6.7E-293 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Gene3D G3DSA:3.40.50.300 68 189 1.4E-29 T 29-03-2018 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Gene3D G3DSA:2.40.50.250 483 573 4.3E-38 T 29-03-2018 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Gene3D G3DSA:3.30.70.240 401 481 8.0E-19 T 29-03-2018 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 SUPERFAMILY SSF52540 3 207 8.52E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 8.9E-25 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 SUPERFAMILY SSF50447 151 299 1.25E-33 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Gene3D G3DSA:3.30.70.870 302 400 7.3E-32 T 29-03-2018 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Gene3D G3DSA:2.40.30.10 190 300 1.1E-22 T 29-03-2018 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Gene3D G3DSA:3.40.50.300 2 67 1.0E-10 T 29-03-2018 CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 Pfam PF00679 Elongation factor G C-terminus 397 476 1.4E-21 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CKQ55_RS12710 6cded23b5252ef15a618af68b488daea 607 SUPERFAMILY SSF54980 398 512 4.12E-26 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 8.1E-142 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 SMART SM00865 206 324 3.4E-56 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 8.1E-42 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.4E-37 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.192 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 SUPERFAMILY SSF52490 12 207 2.09E-69 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 SMART SM00864 12 204 6.3E-111 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 Gene3D G3DSA:3.40.50.1440 8 213 1.6E-42 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CKQ55_RS08110 7fd7222e94ed688fc49938ccd4e20455 383 Gene3D G3DSA:3.30.1330.20 214 324 1.0E-44 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 3.7E-55 T 29-03-2018 CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.2E-135 T 29-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.8E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.8E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 SUPERFAMILY SSF51735 9 252 5.88E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17910 ee8d211287b3382c9a692ad97af48f31 253 Gene3D G3DSA:3.40.50.720 3 251 1.7E-64 T 29-03-2018 CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 SUPERFAMILY SSF55073 444 602 7.85E-49 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 Pfam PF00563 EAL domain 616 847 1.6E-71 T 29-03-2018 IPR001633 EAL domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 Gene3D G3DSA:3.20.20.450 607 856 1.1E-92 T 29-03-2018 IPR001633 EAL domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 Gene3D G3DSA:3.30.70.270 438 606 5.6E-58 T 29-03-2018 CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 313 434 2.6E-13 T 29-03-2018 IPR000014 PAS domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 SMART SM00052 610 852 7.3E-104 T 29-03-2018 IPR001633 EAL domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 SUPERFAMILY SSF55785 304 426 1.11E-16 T 29-03-2018 IPR000014 PAS domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 SMART SM00091 316 382 3.1E-6 T 29-03-2018 IPR000014 PAS domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 Gene3D G3DSA:3.30.450.20 301 437 2.5E-20 T 29-03-2018 CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 SMART SM00267 428 600 1.4E-63 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 437 598 3.7E-40 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 Pfam PF05228 CHASE4 domain 64 220 1.8E-16 T 29-03-2018 IPR007892 CHASE4 CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 SUPERFAMILY SSF141868 615 855 3.53E-84 T 29-03-2018 IPR001633 EAL domain CKQ55_RS31540 116455b3b4d59df51c61a000f7768201 860 Pfam PF00990 Diguanylate cyclase, GGDEF domain 440 596 1.1E-47 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 38.117 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 SUPERFAMILY SSF55920 6 255 7.33E-83 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 Gene3D G3DSA:3.90.230.10 3 258 1.0E-75 T 29-03-2018 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 1.1E-89 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 Pfam PF00557 Metallopeptidase family M24 15 243 1.0E-47 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 7.4E-18 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 7.4E-18 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 7.4E-18 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 7.4E-18 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS26985 cba92214d054af4276ef0802bccbb7cd 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 SUPERFAMILY SSF48179 349 484 9.86E-41 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 485 38.981 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 SUPERFAMILY SSF51735 30 209 6.06E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 3.4E-137 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.3E-28 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 3.7E-23 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-58 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Gene3D G3DSA:3.40.50.720 56 208 6.5E-52 T 29-03-2018 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Gene3D G3DSA:3.40.50.720 1 42 7.3E-5 T 29-03-2018 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 Gene3D G3DSA:1.10.1040.10 210 487 1.6E-88 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS12065 7304671effe77958c4200bc2229f25f7 491 SUPERFAMILY SSF48179 210 370 5.27E-42 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PIRSF PIRSF000350 1 463 7.9E-70 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 Gene3D G3DSA:3.30.390.30 337 463 8.1E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 69.608 T 29-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 Gene3D G3DSA:3.40.50.720 170 336 5.4E-29 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.7E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 SUPERFAMILY SSF51905 1 322 2.67E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 SUPERFAMILY SSF55424 345 463 1.51E-30 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.2E-49 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-25 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.1E-25 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.1E-25 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.1E-25 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.1E-25 T 29-03-2018 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 Gene3D G3DSA:3.50.50.60 4 164 2.2E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS12180 8f2d7cc9ed708c6e1820e01f731d9223 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 4.4E-30 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CKQ55_RS28120 fac09cac45b9b44a6fd043e97ebb9d36 326 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 269 298 8.7E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS28120 fac09cac45b9b44a6fd043e97ebb9d36 326 Gene3D G3DSA:2.160.10.10 223 320 3.2E-11 T 29-03-2018 CKQ55_RS28120 fac09cac45b9b44a6fd043e97ebb9d36 326 Gene3D G3DSA:2.160.10.10 51 222 2.0E-15 T 29-03-2018 CKQ55_RS28120 fac09cac45b9b44a6fd043e97ebb9d36 326 SUPERFAMILY SSF51161 4 317 1.85E-54 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS28540 7900bb8342a0d817a35f28d3e1dbe4b3 144 SUPERFAMILY SSF55298 24 139 5.18E-33 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS28540 7900bb8342a0d817a35f28d3e1dbe4b3 144 Gene3D G3DSA:3.30.1330.40 7 137 8.9E-28 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS28540 7900bb8342a0d817a35f28d3e1dbe4b3 144 Pfam PF01042 Endoribonuclease L-PSP 26 133 3.7E-22 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS22670 d6975cf150a37774b53082bc6f2ee62f 289 Pfam PF00483 Nucleotidyl transferase 2 238 5.8E-69 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CKQ55_RS22670 d6975cf150a37774b53082bc6f2ee62f 289 SUPERFAMILY SSF53448 1 287 1.1E-91 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22670 d6975cf150a37774b53082bc6f2ee62f 289 Gene3D G3DSA:3.90.550.10 1 289 6.3E-71 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22670 d6975cf150a37774b53082bc6f2ee62f 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.8E-155 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CKQ55_RS28025 61d991bd3041003fadbcaff5eff6e6aa 309 Gene3D G3DSA:1.10.3720.10 24 305 9.8E-36 T 29-03-2018 CKQ55_RS28025 61d991bd3041003fadbcaff5eff6e6aa 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 303 4.6E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28025 61d991bd3041003fadbcaff5eff6e6aa 309 SUPERFAMILY SSF161098 25 303 2.62E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Gene3D G3DSA:1.10.645.10 213 408 1.0E-46 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 SUPERFAMILY SSF56762 227 602 1.31E-118 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 140 161 - T 29-03-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 27 191 24.688 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 SUPERFAMILY SSF143243 27 231 6.67E-59 T 29-03-2018 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 18 602 72.528 T 29-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 52 179 2.2E-40 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 254 265 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 217 602 3.8E-175 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 213 602 41.866 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 331 602 2.5E-101 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 51 178 9.2E-44 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 Gene3D G3DSA:1.10.645.10 409 598 8.4E-30 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21125 9391883fe4961c47f6144e8b7d8c9420 602 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 107 162 5.0E-25 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 68 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 Gene3D G3DSA:1.10.1740.10 5 78 1.0E-13 T 29-03-2018 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 164 2.8E-19 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 Gene3D G3DSA:1.10.10.10 79 165 2.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 Pfam PF08281 Sigma-70, region 4 111 164 8.4E-16 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 SUPERFAMILY SSF88659 107 164 4.58E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 Pfam PF04542 Sigma-70 region 2 16 81 1.1E-12 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS30015 9297e20dd975f16f2050fa7f5828a6a7 173 SUPERFAMILY SSF88946 13 101 9.42E-13 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 SUPERFAMILY SSF52518 59 469 1.51E-141 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 SUPERFAMILY SSF52922 702 885 8.24E-64 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 114 294 1.4E-8 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 Gene3D G3DSA:3.40.50.970 472 706 1.7E-66 T 29-03-2018 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 SUPERFAMILY SSF52518 474 701 3.41E-98 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 Gene3D G3DSA:3.40.50.920 707 887 3.5E-43 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 Gene3D G3DSA:3.40.50.970 57 471 1.8E-81 T 29-03-2018 CKQ55_RS08015 344b2826c8535f5787ffedbb85f19f29 887 PIRSF PIRSF000156 1 887 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 3.5E-239 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 Pfam PF08206 Ribonuclease B OB domain 24 80 3.8E-19 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 Gene3D G3DSA:2.40.50.140 558 644 2.5E-6 T 29-03-2018 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 SMART SM00955 189 517 1.7E-127 T 29-03-2018 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 SMART SM00357 23 79 3.3E-13 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 SUPERFAMILY SSF50249 8 80 9.36E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 SUPERFAMILY SSF50249 176 556 6.17E-115 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 Gene3D G3DSA:2.40.50.140 21 74 0.065 T 29-03-2018 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 Pfam PF00575 S1 RNA binding domain 562 636 1.2E-9 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 SUPERFAMILY SSF50249 83 171 5.71E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.123 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 Pfam PF00773 RNB domain 189 516 8.0E-84 T 29-03-2018 CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CKQ55_RS29385 277dc906d1a59c7d973fe81a788dccd6 644 SUPERFAMILY SSF50249 562 642 2.8E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 15 332 3.3E-183 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 SUPERFAMILY SSF53850 24 332 7.5E-81 T 29-03-2018 CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 29-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 Gene3D G3DSA:3.40.190.10 259 335 8.0E-18 T 29-03-2018 CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 Gene3D G3DSA:3.40.190.10 133 258 1.3E-23 T 29-03-2018 CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 1.6E-41 T 29-03-2018 CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 29-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CKQ55_RS20580 f33d8df7776112ae12356e983608564b 338 Gene3D G3DSA:3.40.190.10 24 132 5.5E-18 T 29-03-2018 CKQ55_RS28110 eacdbbccbecc93faac3276ef182444f5 198 Pfam PF03848 Tellurite resistance protein TehB 1 193 9.3E-98 T 29-03-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CKQ55_RS28110 eacdbbccbecc93faac3276ef182444f5 198 Gene3D G3DSA:3.40.50.150 1 197 6.8E-31 T 29-03-2018 CKQ55_RS28110 eacdbbccbecc93faac3276ef182444f5 198 SUPERFAMILY SSF53335 6 197 2.92E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS28110 eacdbbccbecc93faac3276ef182444f5 198 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 1.1E-99 T 29-03-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82714 710 795 8.5E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Pfam PF00873 AcrB/AcrD/AcrF family 14 1010 1.4E-154 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82693 146 191 5.06E-15 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82693 277 333 5.06E-15 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Gene3D G3DSA:3.30.2090.10 190 276 1.1E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82866 305 498 2.88E-30 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82714 193 273 4.45E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Gene3D G3DSA:1.20.1640.10 291 508 3.0E-27 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Gene3D G3DSA:1.20.1640.10 809 1024 2.2E-28 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Gene3D G3DSA:3.30.70.1430 49 153 1.8E-30 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82866 794 1014 4.71E-36 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Gene3D G3DSA:3.30.2090.10 721 794 1.1E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82693 49 144 1.52E-17 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 2.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 2.2E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 Gene3D G3DSA:3.30.70.1430 558 720 1.6E-10 T 29-03-2018 CKQ55_RS01005 22424616d168152e2566301ec11e0173 1024 SUPERFAMILY SSF82693 557 642 3.14E-7 T 29-03-2018 CKQ55_RS18685 0f497040e2eba5b6242b8ddc37e939ab 351 Pfam PF04389 Peptidase family M28 100 325 2.7E-33 T 29-03-2018 IPR007484 Peptidase M28 CKQ55_RS18685 0f497040e2eba5b6242b8ddc37e939ab 351 Gene3D G3DSA:3.40.630.10 24 343 1.7E-39 T 29-03-2018 CKQ55_RS18685 0f497040e2eba5b6242b8ddc37e939ab 351 SUPERFAMILY SSF53187 43 317 1.47E-38 T 29-03-2018 CKQ55_RS22740 38986afd763d63cde4bdb1460154b81b 245 Gene3D G3DSA:3.20.20.70 1 245 3.7E-53 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22740 38986afd763d63cde4bdb1460154b81b 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.5E-79 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CKQ55_RS22740 38986afd763d63cde4bdb1460154b81b 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.902 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CKQ55_RS22740 38986afd763d63cde4bdb1460154b81b 245 Pfam PF00977 Histidine biosynthesis protein 1 233 3.8E-76 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CKQ55_RS22740 38986afd763d63cde4bdb1460154b81b 245 SUPERFAMILY SSF51366 1 244 1.55E-65 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS25460 17b8ec214fbc3aa92ebe0e9c00213fb9 211 Pfam PF00484 Carbonic anhydrase 34 188 8.6E-47 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS25460 17b8ec214fbc3aa92ebe0e9c00213fb9 211 SMART SM00947 27 193 2.6E-62 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS25460 17b8ec214fbc3aa92ebe0e9c00213fb9 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS25460 17b8ec214fbc3aa92ebe0e9c00213fb9 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS25460 17b8ec214fbc3aa92ebe0e9c00213fb9 211 Gene3D G3DSA:3.40.1050.10 1 208 1.4E-64 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS25460 17b8ec214fbc3aa92ebe0e9c00213fb9 211 SUPERFAMILY SSF53056 1 203 7.33E-64 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 4.1E-79 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 Pfam PF01872 RibD C-terminal domain 147 362 1.8E-61 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 SUPERFAMILY SSF53927 3 145 1.17E-48 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 3.7E-153 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 1.7E-21 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 SUPERFAMILY SSF53597 144 362 1.6E-56 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 Gene3D G3DSA:3.40.430.10 124 364 5.4E-68 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 Gene3D G3DSA:3.40.140.10 1 123 8.0E-33 T 29-03-2018 CKQ55_RS06380 34c721d7366f93d728ec8d3c5ca0f6f5 367 PIRSF PIRSF006769 1 367 2.1E-138 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CKQ55_RS19455 58a67297fcb75ac2d8b852321b72fb9d 198 Pfam PF00419 Fimbrial protein 50 197 2.8E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS19455 58a67297fcb75ac2d8b852321b72fb9d 198 SUPERFAMILY SSF49401 48 198 6.46E-33 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS19455 58a67297fcb75ac2d8b852321b72fb9d 198 Gene3D G3DSA:2.60.40.1090 47 198 6.2E-36 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS08245 22360ab7bc39c072e1199bf4a2b14060 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS08245 22360ab7bc39c072e1199bf4a2b14060 404 Gene3D G3DSA:1.20.1250.20 194 387 2.5E-9 T 29-03-2018 CKQ55_RS08245 22360ab7bc39c072e1199bf4a2b14060 404 Pfam PF07690 Major Facilitator Superfamily 13 352 1.4E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS08245 22360ab7bc39c072e1199bf4a2b14060 404 Gene3D G3DSA:1.20.1250.20 5 193 1.8E-26 T 29-03-2018 CKQ55_RS08245 22360ab7bc39c072e1199bf4a2b14060 404 SUPERFAMILY SSF103473 9 390 6.41E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS11380 d52f4a6ea23fa9602d97d4f36f33bc5a 580 PIRSF PIRSF000719 1 575 3.5E-286 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CKQ55_RS11380 d52f4a6ea23fa9602d97d4f36f33bc5a 580 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CKQ55_RS11380 d52f4a6ea23fa9602d97d4f36f33bc5a 580 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.7E-243 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CKQ55_RS11380 d52f4a6ea23fa9602d97d4f36f33bc5a 580 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.001 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CKQ55_RS17285 ef6d3dacc3989edc958c6bad6b9ebba7 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CKQ55_RS17285 ef6d3dacc3989edc958c6bad6b9ebba7 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 1.2E-46 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CKQ55_RS17285 ef6d3dacc3989edc958c6bad6b9ebba7 261 SUPERFAMILY SSF52096 1 260 2.11E-62 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS17285 ef6d3dacc3989edc958c6bad6b9ebba7 261 Gene3D G3DSA:3.90.226.10 5 215 5.4E-48 T 29-03-2018 CKQ55_RS17285 ef6d3dacc3989edc958c6bad6b9ebba7 261 Gene3D G3DSA:1.10.12.10 216 261 4.6E-13 T 29-03-2018 IPR014748 Crontonase, C-terminal CKQ55_RS21815 5cea4711d8434f274adb564f52ac21a4 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.656 T 29-03-2018 IPR022957 Uncharacterised protein family UPF0299 CKQ55_RS21815 5cea4711d8434f274adb564f52ac21a4 132 Pfam PF03788 LrgA family 23 113 4.9E-30 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 Pfam PF00295 Glycosyl hydrolases family 28 351 567 1.4E-24 T 29-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 SUPERFAMILY SSF49265 35 77 7.94E-15 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 SUPERFAMILY SSF49265 104 160 7.94E-15 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 Pfam PF00041 Fibronectin type III domain 41 148 6.9E-8 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 SMART SM00060 40 146 2.4E-9 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 SUPERFAMILY SSF51126 155 602 6.54E-70 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 Gene3D G3DSA:2.160.20.10 159 640 2.0E-86 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS05195 c2f3821ab49197d8ed220ac870e41dc8 658 Gene3D G3DSA:2.60.40.10 41 158 3.8E-18 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 SUPERFAMILY SSF54862 136 182 1.02E-41 T 29-03-2018 CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 SUPERFAMILY SSF54862 2 101 1.02E-41 T 29-03-2018 CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 Gene3D G3DSA:3.30.70.20 2 21 0.028 T 29-03-2018 CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 Gene3D G3DSA:3.30.70.20 22 60 1.1E-8 T 29-03-2018 CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 Gene3D G3DSA:3.30.70.20 92 149 2.1E-9 T 29-03-2018 CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 Pfam PF13247 4Fe-4S dicluster domain 47 97 6.9E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 Gene3D G3DSA:3.30.70.20 150 186 0.25 T 29-03-2018 CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS19090 4d0747f087934d39b6370034f16f3fe0 202 Gene3D G3DSA:3.30.70.20 61 91 1.2E-15 T 29-03-2018 CKQ55_RS15320 cf13c6811d5017a3d62f69e24c4fb146 201 Gene3D G3DSA:3.40.1370.10 141 199 1.5E-11 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15320 cf13c6811d5017a3d62f69e24c4fb146 201 Gene3D G3DSA:3.40.1370.10 4 140 4.0E-48 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15320 cf13c6811d5017a3d62f69e24c4fb146 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.9E-64 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15320 cf13c6811d5017a3d62f69e24c4fb146 201 SUPERFAMILY SSF52166 10 200 4.71E-73 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15320 cf13c6811d5017a3d62f69e24c4fb146 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.057 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15320 cf13c6811d5017a3d62f69e24c4fb146 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.1E-75 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10410 88a4bdff99176178bf7e30a1eb6e06eb 397 Pfam PF07690 Major Facilitator Superfamily 249 385 1.1E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS10410 88a4bdff99176178bf7e30a1eb6e06eb 397 Pfam PF07690 Major Facilitator Superfamily 23 228 5.7E-23 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS10410 88a4bdff99176178bf7e30a1eb6e06eb 397 Gene3D G3DSA:1.20.1250.20 4 209 1.4E-25 T 29-03-2018 CKQ55_RS10410 88a4bdff99176178bf7e30a1eb6e06eb 397 Gene3D G3DSA:1.20.1250.20 213 396 1.0E-21 T 29-03-2018 CKQ55_RS10410 88a4bdff99176178bf7e30a1eb6e06eb 397 SUPERFAMILY SSF103473 13 390 7.32E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 Gene3D G3DSA:3.20.20.70 1 220 1.2E-59 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 4.1E-46 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 SUPERFAMILY SSF51569 1 218 2.62E-66 T 29-03-2018 CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 50.239 T 29-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 CKQ55_RS12230 bc8fcf42511625da57216dd5cc155d87 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 4.4E-100 T 29-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CKQ55_RS22475 9da6eb9d91311793a640620765091d98 372 Gene3D G3DSA:3.40.630.10 25 303 2.2E-26 T 29-03-2018 CKQ55_RS22475 9da6eb9d91311793a640620765091d98 372 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 30 107 1.7E-15 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CKQ55_RS22475 9da6eb9d91311793a640620765091d98 372 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 145 359 1.6E-15 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CKQ55_RS22475 9da6eb9d91311793a640620765091d98 372 SUPERFAMILY SSF53187 140 362 5.62E-42 T 29-03-2018 CKQ55_RS22475 9da6eb9d91311793a640620765091d98 372 SUPERFAMILY SSF53187 16 106 5.62E-42 T 29-03-2018 CKQ55_RS26450 30795dc93eba18a214845740e5242bff 399 Pfam PF07690 Major Facilitator Superfamily 18 321 1.4E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS26450 30795dc93eba18a214845740e5242bff 399 Gene3D G3DSA:1.20.1250.20 199 398 4.9E-17 T 29-03-2018 CKQ55_RS26450 30795dc93eba18a214845740e5242bff 399 Gene3D G3DSA:1.20.1250.20 2 198 6.4E-29 T 29-03-2018 CKQ55_RS26450 30795dc93eba18a214845740e5242bff 399 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.354 T 29-03-2018 IPR023495 Sugar efflux transporter, putative CKQ55_RS26450 30795dc93eba18a214845740e5242bff 399 SUPERFAMILY SSF103473 6 386 2.88E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 SUPERFAMILY SSF53850 91 284 2.53E-19 T 29-03-2018 CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 Gene3D G3DSA:3.40.190.10 91 177 5.4E-9 T 29-03-2018 CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 Gene3D G3DSA:3.40.190.10 178 255 1.5E-5 T 29-03-2018 CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 SUPERFAMILY SSF46785 5 90 3.58E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 Pfam PF03466 LysR substrate binding domain 90 284 1.5E-19 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 Gene3D G3DSA:1.10.10.10 1 85 1.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14560 50ca69445631667b5f2e461155bcff07 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS10335 6a361c6e69bd102762827d0fba218131 127 Gene3D G3DSA:1.10.10.10 2 127 2.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10335 6a361c6e69bd102762827d0fba218131 127 SUPERFAMILY SSF46785 15 120 2.94E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10335 6a361c6e69bd102762827d0fba218131 127 Pfam PF01638 HxlR-like helix-turn-helix 31 117 9.1E-32 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 Gene3D G3DSA:3.30.450.20 177 285 5.2E-15 T 29-03-2018 CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 SUPERFAMILY SSF55073 361 508 2.2E-33 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 Gene3D G3DSA:3.30.70.270 339 510 3.6E-41 T 29-03-2018 CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 506 6.1E-32 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 SMART SM00267 343 510 1.5E-37 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 Pfam PF02743 Cache domain 54 272 2.3E-20 T 29-03-2018 IPR033479 Double Cache domain 1 CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 508 8.2E-32 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS11525 2547d00045c9ec6179f00040a15439f8 510 Gene3D G3DSA:3.30.450.20 70 176 2.4E-13 T 29-03-2018 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.433 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.6E-189 T 29-03-2018 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 PIRSF PIRSF000412 1 417 4.1E-175 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 Gene3D G3DSA:3.40.640.10 37 275 2.9E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 Gene3D G3DSA:3.90.1150.10 276 416 2.6E-59 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CKQ55_RS20055 3c6d5ace4f7eebd4e488ce9774e12b53 417 SUPERFAMILY SSF53383 6 416 1.14E-184 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS15230 23cd89f4b6af5711938416ed1a7359ab 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.8E-9 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CKQ55_RS15230 23cd89f4b6af5711938416ed1a7359ab 195 SUPERFAMILY SSF54534 2 140 6.68E-33 T 29-03-2018 CKQ55_RS15230 23cd89f4b6af5711938416ed1a7359ab 195 Gene3D G3DSA:3.10.50.40 1 181 8.5E-27 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Gene3D G3DSA:2.70.150.10 18 230 1.8E-47 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 1.9E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 489 507 1.9E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 1.9E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 1.9E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Pfam PF00689 Cation transporting ATPase, C-terminus 717 886 2.5E-38 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 76 3.8E-18 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Gene3D G3DSA:1.20.1110.10 544 895 3.4E-81 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Gene3D G3DSA:3.40.1110.10 293 538 5.3E-39 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 600 725 6.0E-36 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 351 2.9E-38 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF81665 230 324 1.07E-116 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF81665 682 893 1.07E-116 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF81665 9 120 1.07E-116 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SMART SM00831 9 82 2.1E-31 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Pfam PF00122 E1-E2 ATPase 117 310 2.8E-52 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 646 6.6E-19 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 542 4.3E-41 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 563 4.3E-41 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 4.3E-41 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 4.3E-41 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 4.3E-41 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 4.3E-41 T 29-03-2018 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF81653 120 229 3.92E-30 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF81660 337 535 1.96E-43 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF56784 328 348 1.17E-58 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS23310 1d740da8f1a560baffcebb110e86617b 895 SUPERFAMILY SSF56784 486 735 1.17E-58 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 SUPERFAMILY SSF46894 131 182 5.44E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 Gene3D G3DSA:1.10.10.10 11 187 1.4E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 176 9.3E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 164 9.3E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 148 9.3E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 ProSitePatterns PS00622 LuxR-type HTH domain signature. 148 175 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 181 4.3E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS17865 2e42cca74ec9fff43a00d15ce44cbd95 194 SMART SM00421 131 188 1.2E-4 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24675 a349a38d2670fb727fc8cb76a3961f95 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 336 4.5E-69 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CKQ55_RS24675 a349a38d2670fb727fc8cb76a3961f95 366 Gene3D G3DSA:3.20.20.70 1 364 5.1E-120 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS24675 a349a38d2670fb727fc8cb76a3961f95 366 SUPERFAMILY SSF51395 1 353 8.25E-116 T 29-03-2018 CKQ55_RS20945 9ddb31ae96bd3e866140b438518675df 228 Pfam PF05036 Sporulation related domain 149 222 1.0E-10 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS20945 9ddb31ae96bd3e866140b438518675df 228 Gene3D G3DSA:3.30.70.1070 146 225 2.7E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS20945 9ddb31ae96bd3e866140b438518675df 228 SUPERFAMILY SSF110997 148 225 7.85E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS20945 9ddb31ae96bd3e866140b438518675df 228 Hamap MF_02022 Cell division protein DedD [dedD]. 10 227 24.293 T 29-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 CKQ55_RS23990 6552eaa1b9c7fd1e8ffe8692916556ef 59 Gene3D G3DSA:1.10.10.60 7 53 9.0E-4 T 29-03-2018 CKQ55_RS23990 6552eaa1b9c7fd1e8ffe8692916556ef 59 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 3.0E-18 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 CKQ55_RS23990 6552eaa1b9c7fd1e8ffe8692916556ef 59 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.278 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 CKQ55_RS23990 6552eaa1b9c7fd1e8ffe8692916556ef 59 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.9E-28 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 CKQ55_RS24210 936dca20e52cf5ed814115c7c28f3110 445 PIRSF PIRSF000337 1 440 5.2E-148 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CKQ55_RS24210 936dca20e52cf5ed814115c7c28f3110 445 Pfam PF00296 Luciferase-like monooxygenase 17 380 5.7E-61 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS24210 936dca20e52cf5ed814115c7c28f3110 445 Gene3D G3DSA:3.20.20.30 1 443 1.1E-97 T 29-03-2018 CKQ55_RS24210 936dca20e52cf5ed814115c7c28f3110 445 SUPERFAMILY SSF51679 2 429 3.53E-118 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS24210 936dca20e52cf5ed814115c7c28f3110 445 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 3 425 4.0E-147 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CKQ55_RS15970 70ab02432117bcb2518d1705abd11274 96 Gene3D G3DSA:3.30.750.24 13 95 1.3E-6 T 29-03-2018 IPR002645 STAS domain CKQ55_RS15970 70ab02432117bcb2518d1705abd11274 96 Pfam PF13466 STAS domain 14 90 4.1E-15 T 29-03-2018 IPR002645 STAS domain CKQ55_RS15970 70ab02432117bcb2518d1705abd11274 96 SUPERFAMILY SSF52091 5 91 1.33E-13 T 29-03-2018 IPR002645 STAS domain CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.54 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 29-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PIRSF PIRSF000532 1 320 1.8E-130 T 29-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 Pfam PF00365 Phosphofructokinase 4 276 4.6E-106 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 SUPERFAMILY SSF53784 3 310 3.27E-112 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.4E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 Gene3D G3DSA:3.40.50.450 1 213 2.9E-81 T 29-03-2018 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 3.6E-124 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CKQ55_RS12315 362c30882394f8dc2f2d5f25e64e846c 320 Gene3D G3DSA:3.40.50.450 214 307 3.2E-8 T 29-03-2018 CKQ55_RS02340 ea9e334ff7db94ea98de8b408372172b 107 SUPERFAMILY SSF117782 1 106 3.27E-38 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CKQ55_RS02340 ea9e334ff7db94ea98de8b408372172b 107 Gene3D G3DSA:3.30.110.70 1 105 1.3E-36 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CKQ55_RS02340 ea9e334ff7db94ea98de8b408372172b 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.736 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CKQ55_RS02340 ea9e334ff7db94ea98de8b408372172b 107 Pfam PF01906 Putative heavy-metal-binding 1 104 1.3E-40 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 SUPERFAMILY SSF51556 1 258 5.99E-84 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 63.931 T 29-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 PIRSF PIRSF005902 1 260 4.7E-75 T 29-03-2018 IPR001130 TatD family GO:0016788 CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 Pfam PF01026 TatD related DNase 2 257 8.5E-69 T 29-03-2018 IPR001130 TatD family GO:0016788 CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CKQ55_RS11720 1152af33c89129e766021dbd0901cb20 260 Gene3D G3DSA:3.20.20.140 1 259 2.1E-81 T 29-03-2018 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 Gene3D G3DSA:4.10.430.10 99 139 1.2E-17 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 Pfam PF00816 H-NS histone family 38 133 8.6E-19 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 SUPERFAMILY SSF81273 10 63 1.22E-13 T 29-03-2018 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 Gene3D G3DSA:1.10.287.1050 8 63 2.4E-19 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 SUPERFAMILY SSF81273 98 140 4.71E-10 T 29-03-2018 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 SMART SM00528 93 139 3.0E-14 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CKQ55_RS31680 a6be212cf8430f3383d7b75931eeab7c 151 PIRSF PIRSF002096 7 139 6.3E-43 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CKQ55_RS30470 8798f4e1b12c881e7f2e2e3265b3ac98 188 Gene3D G3DSA:3.30.870.10 34 188 3.3E-26 T 29-03-2018 CKQ55_RS30470 8798f4e1b12c881e7f2e2e3265b3ac98 188 Pfam PF13091 PLD-like domain 53 178 1.7E-23 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS30470 8798f4e1b12c881e7f2e2e3265b3ac98 188 SUPERFAMILY SSF56024 40 184 1.57E-34 T 29-03-2018 CKQ55_RS03825 9c1aa8760005ac494a40a96f152f410b 559 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.307 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CKQ55_RS03825 9c1aa8760005ac494a40a96f152f410b 559 Gene3D G3DSA:1.10.287.70 5 515 0.0024 T 29-03-2018 CKQ55_RS03825 9c1aa8760005ac494a40a96f152f410b 559 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 8.9E-240 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CKQ55_RS03825 9c1aa8760005ac494a40a96f152f410b 559 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 558 5.9E-274 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CKQ55_RS03825 9c1aa8760005ac494a40a96f152f410b 559 PIRSF PIRSF001294 1 559 1.5E-233 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CKQ55_RS20080 62cc3bf9130409b5d15e5b4e80552057 278 Gene3D G3DSA:2.70.98.10 3 275 1.1E-38 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS20080 62cc3bf9130409b5d15e5b4e80552057 278 Pfam PF01263 Aldose 1-epimerase 7 271 4.4E-19 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CKQ55_RS20080 62cc3bf9130409b5d15e5b4e80552057 278 SUPERFAMILY SSF74650 3 273 1.44E-40 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS04655 da5303c6a3b4afdd678564c18480ee70 139 SUPERFAMILY SSF53383 4 133 7.54E-16 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS04655 da5303c6a3b4afdd678564c18480ee70 139 Gene3D G3DSA:3.90.1150.10 1 138 5.0E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 SUPERFAMILY SSF111369 40 130 7.59E-9 T 29-03-2018 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 Pfam PF13533 Biotin-lipoyl like 48 95 1.2E-11 T 29-03-2018 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 Gene3D G3DSA:1.20.1600.10 176 312 8.2E-6 T 29-03-2018 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 Pfam PF13437 HlyD family secretion protein 214 318 1.0E-11 T 29-03-2018 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 2.8E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 2.8E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 Gene3D G3DSA:1.10.287.470 122 175 3.3E-9 T 29-03-2018 CKQ55_RS09410 7adab333b961b4a08858fffe9247fa11 355 Gene3D G3DSA:2.40.50.100 46 121 8.0E-15 T 29-03-2018 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 Gene3D G3DSA:3.40.50.2300 177 307 3.4E-45 T 29-03-2018 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.9E-43 T 29-03-2018 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 SUPERFAMILY SSF47413 2 59 7.19E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 SUPERFAMILY SSF53822 60 329 1.85E-89 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 Gene3D G3DSA:3.40.50.2300 55 176 1.2E-30 T 29-03-2018 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 Gene3D G3DSA:1.10.260.40 2 54 1.5E-19 T 29-03-2018 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 SMART SM00354 1 71 4.1E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12830 2d4c3756e5e0386a117849cf399514f4 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS06295 1befafc5236d8cedccc784c4309f6a6e 454 Gene3D G3DSA:1.20.1250.20 14 215 1.6E-39 T 29-03-2018 CKQ55_RS06295 1befafc5236d8cedccc784c4309f6a6e 454 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS06295 1befafc5236d8cedccc784c4309f6a6e 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS06295 1befafc5236d8cedccc784c4309f6a6e 454 SUPERFAMILY SSF103473 8 428 2.35E-79 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06295 1befafc5236d8cedccc784c4309f6a6e 454 Gene3D G3DSA:1.20.1250.20 242 431 2.8E-24 T 29-03-2018 CKQ55_RS06295 1befafc5236d8cedccc784c4309f6a6e 454 Pfam PF07690 Major Facilitator Superfamily 30 341 8.0E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS15260 30c18667e8ed973b3f1fba8a25d8e584 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 4.8E-31 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CKQ55_RS15260 30c18667e8ed973b3f1fba8a25d8e584 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 28.811 T 29-03-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 CKQ55_RS15260 30c18667e8ed973b3f1fba8a25d8e584 95 Gene3D G3DSA:3.40.1260.10 1 93 3.2E-22 T 29-03-2018 CKQ55_RS15260 30c18667e8ed973b3f1fba8a25d8e584 95 Pfam PF04077 DsrH like protein 7 90 2.1E-27 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CKQ55_RS15260 30c18667e8ed973b3f1fba8a25d8e584 95 SUPERFAMILY SSF75169 1 95 1.49E-29 T 29-03-2018 IPR027396 DsrEFH-like CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 SUPERFAMILY SSF51905 284 406 1.39E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 SUPERFAMILY SSF51905 171 221 1.39E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 Gene3D G3DSA:3.50.50.60 171 418 1.3E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 SUPERFAMILY SSF51905 9 226 8.05E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 Gene3D G3DSA:3.50.50.60 4 170 7.9E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 9.2E-8 T 29-03-2018 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 9.2E-8 T 29-03-2018 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 9.2E-8 T 29-03-2018 CKQ55_RS28545 b90a5849d2d8f21bb4a67dde93b0f8b5 419 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 198 3.4E-25 T 29-03-2018 CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 4.9E-24 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 Gene3D G3DSA:3.40.5.10 1 49 1.1E-22 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 Gene3D G3DSA:3.10.430.100 63 148 7.4E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 SUPERFAMILY SSF55653 60 149 4.84E-24 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.6E-58 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.146 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10385 28006caa5f61f7b7810a0a09f84aeed5 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.4E-22 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 Gene3D G3DSA:3.40.50.360 3 176 5.0E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 PIRSF PIRSF038996 1 176 4.7E-56 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 SUPERFAMILY SSF52218 3 172 5.41E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 TIGRFAM TIGR01752 flav_long: flavodoxin 3 175 8.9E-69 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 Pfam PF00258 Flavodoxin 6 167 4.0E-27 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 PRINTS PR00369 Flavodoxin signature 88 98 1.7E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 PRINTS PR00369 Flavodoxin signature 51 62 1.7E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 PRINTS PR00369 Flavodoxin signature 5 18 1.7E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS22805 b1f1429c6aa634c7785429dedb178699 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CKQ55_RS13815 387241a06b14474875d5d4bf32db34fd 423 Gene3D G3DSA:2.70.70.10 282 423 1.2E-33 T 29-03-2018 CKQ55_RS13815 387241a06b14474875d5d4bf32db34fd 423 SUPERFAMILY SSF51261 220 421 1.57E-48 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS13815 387241a06b14474875d5d4bf32db34fd 423 Gene3D G3DSA:1.20.5.50 134 254 0.0058 T 29-03-2018 CKQ55_RS13815 387241a06b14474875d5d4bf32db34fd 423 Pfam PF01551 Peptidase family M23 324 417 1.1E-26 T 29-03-2018 IPR016047 Peptidase M23 CKQ55_RS13815 387241a06b14474875d5d4bf32db34fd 423 Gene3D G3DSA:1.20.5.170 37 127 2.7E-4 T 29-03-2018 CKQ55_RS15910 06258c8045a13b1282fb122dbc4d986c 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.4E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS15910 06258c8045a13b1282fb122dbc4d986c 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-32 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS15910 06258c8045a13b1282fb122dbc4d986c 95 SUPERFAMILY SSF69754 1 95 3.53E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS15910 06258c8045a13b1282fb122dbc4d986c 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 9.9E-27 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS06625 803aa61d51b5834845d9aecc07eb693c 368 SUPERFAMILY SSF54511 196 277 5.23E-5 T 29-03-2018 IPR009017 Green fluorescent protein CKQ55_RS06625 803aa61d51b5834845d9aecc07eb693c 368 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 16 365 8.0E-175 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 CKQ55_RS06625 803aa61d51b5834845d9aecc07eb693c 368 Pfam PF07759 Protein of unknown function (DUF1615) 53 367 2.8E-146 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 SUPERFAMILY SSF53383 17 440 6.28E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Gene3D G3DSA:3.90.1150.10 775 906 2.9E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 SUPERFAMILY SSF53383 929 951 5.64E-101 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 SUPERFAMILY SSF53383 463 889 5.64E-101 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Pfam PF02347 Glycine cleavage system P-protein 461 739 1.7E-8 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Pfam PF02347 Glycine cleavage system P-protein 16 438 4.9E-189 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Gene3D G3DSA:3.40.640.10 96 342 9.6E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Gene3D G3DSA:3.90.1150.10 343 441 3.6E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Gene3D G3DSA:3.40.640.10 530 774 1.2E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS17365 218325c9ec7b04bcc2bff5d8bae25a73 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.61 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.3E-24 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 1.1E-92 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 PIRSF PIRSF000193 2 269 6.0E-97 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 3.4E-38 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 SUPERFAMILY SSF48179 162 268 2.04E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.164 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 Gene3D G3DSA:3.40.50.720 1 159 4.9E-35 T 29-03-2018 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 Gene3D G3DSA:1.10.3730.10 160 269 1.3E-43 T 29-03-2018 CKQ55_RS06565 9c0cff5c610b58d0c558035869bb2eb7 269 SUPERFAMILY SSF51735 3 158 6.45E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 Pfam PF01791 DeoC/LacD family aldolase 76 207 1.3E-9 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 Gene3D G3DSA:3.20.20.70 1 235 1.4E-66 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 18 235 25.319 T 29-03-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 SUPERFAMILY SSF51569 13 227 1.05E-59 T 29-03-2018 CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 SMART SM01133 19 235 5.1E-57 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 PIRSF PIRSF001357 13 242 3.7E-62 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS17730 1e0a0a3ba69dd44caa578f430845705e 249 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 20 228 4.2E-53 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS17965 af73a1669019e1fbc37798d7b5648b2e 108 PIRSF PIRSF029883 1 108 1.6E-34 T 29-03-2018 IPR025499 Pectin degradation protein KdgF CKQ55_RS17965 af73a1669019e1fbc37798d7b5648b2e 108 Pfam PF07883 Cupin domain 33 89 1.8E-14 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS17965 af73a1669019e1fbc37798d7b5648b2e 108 Gene3D G3DSA:2.60.120.10 1 108 4.3E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS17965 af73a1669019e1fbc37798d7b5648b2e 108 SUPERFAMILY SSF51182 8 100 1.63E-24 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 SUPERFAMILY SSF56784 1 264 9.08E-66 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 1.7E-21 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 214 236 - T 29-03-2018 CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 Gene3D G3DSA:3.30.1240.10 98 190 2.1E-26 T 29-03-2018 CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 260 4.9E-57 T 29-03-2018 IPR000150 Cof family GO:0016787 CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 260 1.2E-55 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS02460 54701fedcab337cec52ed1e3e93ae061 271 Gene3D G3DSA:3.40.50.1000 1 97 3.2E-8 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 Gene3D G3DSA:3.40.50.300 443 622 1.6E-11 T 29-03-2018 CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 Gene3D G3DSA:3.40.50.300 17 413 4.5E-32 T 29-03-2018 CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 Pfam PF13307 Helicase C-terminal domain 459 616 8.1E-34 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 SUPERFAMILY SSF52540 573 596 5.22E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 SUPERFAMILY SSF52540 40 88 5.22E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 SUPERFAMILY SSF52540 477 542 5.22E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 SMART SM00491 474 603 1.3E-54 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 SMART SM00487 16 286 0.0024 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 2.4E-5 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CKQ55_RS24035 d0463b836c67676b59e3e5cfd0992cd8 636 SUPERFAMILY SSF52540 14 232 6.06E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25090 84c4e0bd636a30c9278cc7a35aaca31b 342 Pfam PF13379 NMT1-like family 49 270 1.2E-16 T 29-03-2018 CKQ55_RS25090 84c4e0bd636a30c9278cc7a35aaca31b 342 SUPERFAMILY SSF53850 47 273 9.45E-35 T 29-03-2018 CKQ55_RS25090 84c4e0bd636a30c9278cc7a35aaca31b 342 Gene3D G3DSA:3.40.190.10 145 341 8.4E-22 T 29-03-2018 CKQ55_RS25090 84c4e0bd636a30c9278cc7a35aaca31b 342 Gene3D G3DSA:3.40.190.10 44 143 5.9E-13 T 29-03-2018 CKQ55_RS29125 da4e77f1fbddb9223cb435e9e1081616 244 Gene3D G3DSA:3.40.50.300 1 243 1.3E-74 T 29-03-2018 CKQ55_RS29125 da4e77f1fbddb9223cb435e9e1081616 244 Pfam PF00005 ABC transporter 20 168 8.0E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29125 da4e77f1fbddb9223cb435e9e1081616 244 SMART SM00382 29 216 1.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29125 da4e77f1fbddb9223cb435e9e1081616 244 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS29125 da4e77f1fbddb9223cb435e9e1081616 244 SUPERFAMILY SSF52540 4 238 9.16E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29125 da4e77f1fbddb9223cb435e9e1081616 244 PIRSF PIRSF039085 1 244 9.6E-108 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS29090 389c87fde0fbe9deb77f11838f93adf2 301 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 285 1.7E-68 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS29090 389c87fde0fbe9deb77f11838f93adf2 301 Gene3D G3DSA:3.40.50.1100 133 301 4.4E-46 T 29-03-2018 CKQ55_RS29090 389c87fde0fbe9deb77f11838f93adf2 301 SUPERFAMILY SSF53686 3 296 9.04E-81 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS29090 389c87fde0fbe9deb77f11838f93adf2 301 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CKQ55_RS29090 389c87fde0fbe9deb77f11838f93adf2 301 Gene3D G3DSA:3.40.50.1100 17 132 9.7E-32 T 29-03-2018 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 Pfam PF06480 FtsH Extracellular 5 93 3.6E-17 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 SUPERFAMILY SSF52540 141 391 1.71E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 9.9E-248 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 SUPERFAMILY SSF140990 402 602 6.02E-73 T 29-03-2018 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 Pfam PF01434 Peptidase family M41 382 591 9.2E-83 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 Gene3D G3DSA:3.40.50.300 128 331 5.2E-63 T 29-03-2018 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 Gene3D G3DSA:1.10.8.60 332 411 3.2E-25 T 29-03-2018 CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 SMART SM00382 184 323 1.9E-26 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS16040 12eb5b3b8e81c66a1ad85f51ed353190 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.451 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 Gene3D G3DSA:1.10.490.10 19 164 9.4E-14 T 29-03-2018 CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 SUPERFAMILY SSF46458 27 155 1.58E-16 T 29-03-2018 IPR009050 Globin-like CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 Gene3D G3DSA:3.30.70.270 294 465 2.1E-49 T 29-03-2018 CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 459 3.1E-51 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 Pfam PF11563 Protoglobin 29 160 4.0E-13 T 29-03-2018 CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 SUPERFAMILY SSF55073 304 461 1.41E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 SMART SM00267 287 460 1.5E-55 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS09405 2467052201b58ef17cdb71831140c782 465 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 455 1.3E-43 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 1.1E-11 T 29-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Gene3D G3DSA:1.10.10.10 1 64 8.3E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Pfam PF08279 HTH domain 10 58 2.0E-12 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 2.6E-81 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Gene3D G3DSA:2.30.30.100 272 318 3.4E-14 T 29-03-2018 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 6.9E-24 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Gene3D G3DSA:3.30.930.10 65 270 5.2E-61 T 29-03-2018 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 75 1.7E-28 T 29-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 SUPERFAMILY SSF46785 7 60 1.09E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 SUPERFAMILY SSF55681 74 268 6.09E-57 T 29-03-2018 CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 SUPERFAMILY SSF50037 271 317 1.01E-10 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CKQ55_RS11625 e08bfc892ff048d93530daf9d0d5d806 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.535 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CKQ55_RS00670 ddb78f0d57b223728c92ff8f65cfe2a5 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.5E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS00670 ddb78f0d57b223728c92ff8f65cfe2a5 211 SUPERFAMILY SSF46689 12 85 4.98E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS00670 ddb78f0d57b223728c92ff8f65cfe2a5 211 Gene3D G3DSA:1.10.10.60 9 70 2.1E-19 T 29-03-2018 CKQ55_RS00670 ddb78f0d57b223728c92ff8f65cfe2a5 211 Gene3D G3DSA:1.10.357.10 71 204 2.9E-24 T 29-03-2018 CKQ55_RS00670 ddb78f0d57b223728c92ff8f65cfe2a5 211 SUPERFAMILY SSF48498 92 206 1.94E-27 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Gene3D G3DSA:1.20.5.460 283 304 3.6E-14 T 29-03-2018 CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 PRINTS PR00625 DnaJ domain signature 7 25 2.2E-17 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 PRINTS PR00625 DnaJ domain signature 41 61 2.2E-17 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 PRINTS PR00625 DnaJ domain signature 25 40 2.2E-17 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 PRINTS PR00625 DnaJ domain signature 61 80 2.2E-17 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 53.473 T 29-03-2018 IPR023859 DNA-binding protein, curved-DNA CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Gene3D G3DSA:2.60.260.20 204 282 3.9E-19 T 29-03-2018 CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 29-03-2018 IPR018253 DnaJ domain, conserved site CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Pfam PF00226 DnaJ domain 5 66 4.1E-22 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Pfam PF01556 DnaJ C terminal domain 120 276 7.4E-32 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 SUPERFAMILY SSF46565 1 104 7.56E-27 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 SUPERFAMILY SSF49493 115 208 6.28E-15 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Gene3D G3DSA:2.60.260.20 115 199 1.7E-17 T 29-03-2018 CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 Gene3D G3DSA:1.10.287.110 1 114 2.7E-31 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 SUPERFAMILY SSF49493 204 287 5.23E-17 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CKQ55_RS10805 3de3e118abac9a4716398cc1b730fbc1 306 SMART SM00271 4 61 6.0E-24 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 SUPERFAMILY SSF56935 13 690 1.35E-127 T 29-03-2018 CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 Gene3D G3DSA:2.170.130.10 7 153 6.5E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 145 3.7E-15 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 Gene3D G3DSA:2.40.170.20 154 690 4.0E-89 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 Pfam PF00593 TonB dependent receptor 221 688 5.3E-65 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 673 690 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS25105 2b66f8eee52904a8b29af707dcfed505 690 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 690 5.2E-113 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS18905 032de19c945907a509e0a8d65796ed14 246 Gene3D G3DSA:1.10.10.10 4 105 1.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18905 032de19c945907a509e0a8d65796ed14 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 6.9E-12 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS18905 032de19c945907a509e0a8d65796ed14 246 SMART SM00862 24 101 2.7E-8 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS18905 032de19c945907a509e0a8d65796ed14 246 SUPERFAMILY SSF46894 19 101 6.52E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS02465 0f7191a902f690f0c5d7360031f3d426 411 SUPERFAMILY SSF103473 10 401 3.01E-48 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS02465 0f7191a902f690f0c5d7360031f3d426 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS02465 0f7191a902f690f0c5d7360031f3d426 411 Gene3D G3DSA:1.20.1250.20 9 202 3.2E-27 T 29-03-2018 CKQ55_RS02465 0f7191a902f690f0c5d7360031f3d426 411 Gene3D G3DSA:1.20.1250.20 209 407 8.3E-11 T 29-03-2018 CKQ55_RS02465 0f7191a902f690f0c5d7360031f3d426 411 Pfam PF07690 Major Facilitator Superfamily 26 362 4.3E-29 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 SUPERFAMILY SSF53850 99 303 2.05E-35 T 29-03-2018 CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 Gene3D G3DSA:3.40.190.10 95 196 4.0E-12 T 29-03-2018 CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 SUPERFAMILY SSF46785 9 88 1.16E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 Gene3D G3DSA:1.10.10.10 8 91 1.6E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 68 4.4E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 Gene3D G3DSA:3.40.190.10 197 275 2.0E-9 T 29-03-2018 CKQ55_RS28210 3b5cbd5a4593d5016bea4b2bbce577b1 308 Pfam PF03466 LysR substrate binding domain 105 303 2.5E-20 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 SUPERFAMILY SSF46689 181 232 2.33E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 SMART SM00342 199 282 3.2E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 Pfam PF12833 Helix-turn-helix domain 205 284 1.2E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 Gene3D G3DSA:2.60.120.280 12 175 5.5E-21 T 29-03-2018 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 Pfam PF02311 AraC-like ligand binding domain 28 162 2.7E-14 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 1.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 1.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 SUPERFAMILY SSF46689 236 285 2.46E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 Gene3D G3DSA:1.10.10.60 176 235 3.4E-13 T 29-03-2018 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 Gene3D G3DSA:1.10.10.60 236 289 1.8E-14 T 29-03-2018 CKQ55_RS10310 8b231b316f68e490642a281f116738a6 290 SUPERFAMILY SSF51215 13 169 3.92E-27 T 29-03-2018 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 Gene3D G3DSA:3.90.1150.10 1 76 4.2E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 SUPERFAMILY SSF53383 1 396 1.33E-116 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.1E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.1E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.1E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.1E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 Pfam PF00155 Aminotransferase class I and II 27 392 5.0E-94 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 Gene3D G3DSA:3.40.640.10 77 299 8.3E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS02010 95d2d9353ccdecc22a3623993b17eed9 396 Gene3D G3DSA:3.90.1150.10 300 396 2.6E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS19815 d5c6ea8e2473d2cc7bacb9743f8ff0c0 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 8.2E-76 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CKQ55_RS19815 d5c6ea8e2473d2cc7bacb9743f8ff0c0 243 Gene3D G3DSA:3.60.140.10 1 243 1.0E-95 T 29-03-2018 CKQ55_RS19815 d5c6ea8e2473d2cc7bacb9743f8ff0c0 243 SUPERFAMILY SSF64438 3 242 5.13E-88 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CKQ55_RS19815 d5c6ea8e2473d2cc7bacb9743f8ff0c0 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 6.6E-81 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CKQ55_RS24540 705cc1e3f152df28d73ca537e337d7eb 225 SUPERFAMILY SSF103501 1 224 3.01E-71 T 29-03-2018 IPR023234 NarG-like domain CKQ55_RS24540 705cc1e3f152df28d73ca537e337d7eb 225 Gene3D G3DSA:1.20.950.20 1 216 8.1E-45 T 29-03-2018 CKQ55_RS24540 705cc1e3f152df28d73ca537e337d7eb 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 3.4E-80 T 29-03-2018 IPR023234 NarG-like domain CKQ55_RS24540 705cc1e3f152df28d73ca537e337d7eb 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 5.3E-124 T 29-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 CKQ55_RS13785 d257994b9bee4e68c58d6276cf7d08b9 352 Gene3D G3DSA:3.40.50.2000 1 147 2.7E-33 T 29-03-2018 CKQ55_RS13785 d257994b9bee4e68c58d6276cf7d08b9 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 2.4E-167 T 29-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CKQ55_RS13785 d257994b9bee4e68c58d6276cf7d08b9 352 Gene3D G3DSA:3.40.50.2000 163 348 6.8E-44 T 29-03-2018 CKQ55_RS13785 d257994b9bee4e68c58d6276cf7d08b9 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 4.2E-88 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CKQ55_RS13785 d257994b9bee4e68c58d6276cf7d08b9 352 SUPERFAMILY SSF53756 1 343 1.39E-100 T 29-03-2018 CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 SUPERFAMILY SSF52540 508 653 6.29E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 SUPERFAMILY SSF52540 292 342 6.29E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 SMART SM00487 265 459 2.3E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Pfam PF00270 DEAD/DEAH box helicase 293 433 1.4E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 SUPERFAMILY SSF50249 9 175 7.02E-43 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 SUPERFAMILY SSF52540 210 453 3.5E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.4E-16 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Gene3D G3DSA:3.40.50.300 456 689 1.6E-25 T 29-03-2018 CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Pfam PF17191 RecG wedge domain 14 171 2.7E-20 T 29-03-2018 IPR033454 RecG, wedge domain CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 6.5E-249 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Gene3D G3DSA:1.10.150.20 3 52 4.2E-4 T 29-03-2018 CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Gene3D G3DSA:3.40.50.300 249 455 2.6E-35 T 29-03-2018 CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 SMART SM00490 505 589 1.2E-19 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS13635 68027b4bc14f76447556df2c12b91c99 693 Gene3D G3DSA:2.40.50.140 53 142 6.4E-12 T 29-03-2018 CKQ55_RS22345 7e431351c39e8d62d46de0d40d1db335 115 SUPERFAMILY SSF160719 13 114 4.71E-30 T 29-03-2018 CKQ55_RS22345 7e431351c39e8d62d46de0d40d1db335 115 Pfam PF04965 Gene 25-like lysozyme 18 104 9.0E-16 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CKQ55_RS22345 7e431351c39e8d62d46de0d40d1db335 115 Gene3D G3DSA:3.10.450.40 4 115 2.0E-25 T 29-03-2018 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 SMART SM00342 187 270 3.4E-34 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 Gene3D G3DSA:1.10.10.60 228 275 1.4E-14 T 29-03-2018 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 Gene3D G3DSA:1.10.10.60 167 227 1.8E-15 T 29-03-2018 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 Gene3D G3DSA:2.60.120.280 6 161 8.9E-16 T 29-03-2018 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 2.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 2.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 SUPERFAMILY SSF46689 223 272 8.51E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 SUPERFAMILY SSF51215 16 153 4.18E-13 T 29-03-2018 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 SUPERFAMILY SSF46689 170 221 1.16E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 Pfam PF12833 Helix-turn-helix domain 193 271 3.0E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 Pfam PF02311 AraC-like ligand binding domain 17 154 5.6E-22 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS12360 6d534d2ed384bc69b37a19613e2cd786 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 53.694 T 29-03-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 351 476 5.1E-20 T 29-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 30 331 4.5E-104 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 Gene3D G3DSA:2.60.120.560 358 479 1.4E-23 T 29-03-2018 CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 SUPERFAMILY SSF75005 24 331 3.61E-113 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 19 453 1.4E-139 T 29-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 SUPERFAMILY SSF49899 331 479 4.35E-30 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 SMART SM00640 30 442 6.6E-146 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CKQ55_RS17930 ba34031dc91c491ddba82fd6dc02777c 479 Gene3D G3DSA:2.115.10.20 35 357 9.0E-109 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS04595 d8aff4ee79e38a353170b33f3a34f8f1 333 Gene3D G3DSA:1.10.3720.10 2 322 1.2E-41 T 29-03-2018 CKQ55_RS04595 d8aff4ee79e38a353170b33f3a34f8f1 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 333 1.9E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04595 d8aff4ee79e38a353170b33f3a34f8f1 333 SUPERFAMILY SSF161098 197 316 6.93E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04595 d8aff4ee79e38a353170b33f3a34f8f1 333 SUPERFAMILY SSF161098 90 158 6.93E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 SUPERFAMILY SSF51395 434 1191 1.01E-250 T 29-03-2018 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Gene3D G3DSA:3.60.20.10 12 436 6.1E-143 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Gene3D G3DSA:3.20.20.70 437 778 3.4E-83 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 1.2E-156 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Pfam PF04898 Glutamate synthase central domain 457 737 4.7E-105 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Gene3D G3DSA:2.160.20.60 1211 1485 2.8E-94 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Pfam PF01493 GXGXG motif 1236 1419 4.7E-74 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Gene3D G3DSA:3.20.20.70 779 1208 3.8E-146 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 5.4E-177 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 SUPERFAMILY SSF69336 1211 1465 8.63E-86 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS15860 20132148eee16bdfb81d9f4b06a39f47 1486 SUPERFAMILY SSF56235 12 428 3.52E-149 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS06580 44732005f8e9795093a7e1b6b415f974 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 26.937 T 29-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CKQ55_RS06580 44732005f8e9795093a7e1b6b415f974 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 2 85 6.9E-29 T 29-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Gene3D G3DSA:4.10.1250.10 232 276 7.4E-16 T 29-03-2018 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 7.1E-159 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 SUPERFAMILY SSF103025 3 277 7.53E-88 T 29-03-2018 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Gene3D G3DSA:3.30.1360.120 136 231 3.2E-23 T 29-03-2018 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 SUPERFAMILY SSF101790 271 361 1.64E-26 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.304 T 29-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.2E-80 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Gene3D G3DSA:3.30.1360.120 2 135 9.1E-31 T 29-03-2018 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Gene3D G3DSA:2.40.30.110 277 364 1.9E-20 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 1.7E-19 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CKQ55_RS17355 9771621db58e2492cb9a669b13e44024 364 PIRSF PIRSF006487 1 363 1.3E-77 T 29-03-2018 CKQ55_RS09720 e2ffc30c15092084ad67aee34f9f2dfa 126 Pfam PF05717 IS66 Orf2 like protein 6 103 5.7E-37 T 29-03-2018 IPR008878 Transposase IS66, Orf2 CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 3.6E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 SUPERFAMILY SSF46785 18 82 6.09E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 Gene3D G3DSA:1.20.120.530 75 217 3.3E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 Pfam PF07729 FCD domain 89 210 2.4E-16 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 Gene3D G3DSA:1.10.10.10 1 74 7.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 SUPERFAMILY SSF48008 84 215 7.85E-18 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 SMART SM00895 88 211 1.4E-8 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS01340 18f6a32c659a181e923ab3215894475c 238 SMART SM00345 20 78 2.1E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 3.3E-68 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 Gene3D G3DSA:3.40.50.1100 134 323 2.1E-59 T 29-03-2018 CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 1.4E-145 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 Gene3D G3DSA:3.40.50.1100 20 133 1.0E-32 T 29-03-2018 CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 2.0E-137 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CKQ55_RS20645 199d20e287be2877365fd09bdb1bd7be 323 SUPERFAMILY SSF53686 3 317 9.95E-98 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS22115 47d8c45f8a91aeede76a5bf03aa89c1a 427 Gene3D G3DSA:1.20.1250.20 200 408 1.1E-20 T 29-03-2018 CKQ55_RS22115 47d8c45f8a91aeede76a5bf03aa89c1a 427 SUPERFAMILY SSF103473 5 402 6.93E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS22115 47d8c45f8a91aeede76a5bf03aa89c1a 427 Pfam PF03825 Nucleoside H+ symporter 1 404 6.1E-180 T 29-03-2018 CKQ55_RS22115 47d8c45f8a91aeede76a5bf03aa89c1a 427 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 414 2.0E-189 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CKQ55_RS22115 47d8c45f8a91aeede76a5bf03aa89c1a 427 Gene3D G3DSA:1.20.1250.20 2 193 1.8E-16 T 29-03-2018 CKQ55_RS00515 f3b8ed534f479eb7360c740e58c478bf 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 4.8E-74 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CKQ55_RS00515 f3b8ed534f479eb7360c740e58c478bf 213 SUPERFAMILY SSF101322 2 210 1.05E-81 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CKQ55_RS00515 f3b8ed534f479eb7360c740e58c478bf 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 1.0E-99 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CKQ55_RS00515 f3b8ed534f479eb7360c740e58c478bf 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.48 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CKQ55_RS00515 f3b8ed534f479eb7360c740e58c478bf 213 Gene3D G3DSA:1.10.3890.10 4 207 3.8E-79 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 3.9E-187 T 29-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 9.0E-32 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 SUPERFAMILY SSF53067 2 242 2.76E-74 T 29-03-2018 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 Gene3D G3DSA:3.30.420.40 238 484 5.9E-57 T 29-03-2018 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 PIRSF PIRSF000538 1 484 2.0E-136 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 Gene3D G3DSA:3.30.420.40 1 237 1.5E-79 T 29-03-2018 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 5.1E-84 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS14030 a9569c22e1098ce8c901eceb087fe448 484 SUPERFAMILY SSF53067 243 482 2.36E-63 T 29-03-2018 CKQ55_RS23730 1c4601dd925a18257094cd41002b671b 444 PIRSF PIRSF005348 9 444 9.0E-157 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CKQ55_RS23730 1c4601dd925a18257094cd41002b671b 444 Pfam PF03390 2-hydroxycarboxylate transporter family 29 438 1.7E-144 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CKQ55_RS00600 9509fd6c3b7157893986a5faceac8a69 124 SUPERFAMILY SSF141530 6 120 5.23E-32 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS00600 9509fd6c3b7157893986a5faceac8a69 124 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 6 117 3.3E-34 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS00600 9509fd6c3b7157893986a5faceac8a69 124 Gene3D G3DSA:2.40.33.40 5 119 5.6E-36 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS00600 9509fd6c3b7157893986a5faceac8a69 124 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 10 119 3.0E-24 T 29-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS30065 dddcb2d8eb09805631f6a17ebe461be8 60 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 56 4.3E-9 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS30065 dddcb2d8eb09805631f6a17ebe461be8 60 SUPERFAMILY SSF53659 6 60 2.21E-12 T 29-03-2018 CKQ55_RS30065 dddcb2d8eb09805631f6a17ebe461be8 60 Gene3D G3DSA:3.40.718.10 5 60 2.3E-10 T 29-03-2018 CKQ55_RS25095 0173e178bfc1783dcee46b7e347a2e5e 331 SUPERFAMILY SSF161098 127 307 5.36E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25095 0173e178bfc1783dcee46b7e347a2e5e 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 312 2.9E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25095 0173e178bfc1783dcee46b7e347a2e5e 331 Gene3D G3DSA:1.10.3720.10 22 316 3.0E-23 T 29-03-2018 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.118 T 29-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 SMART SM00471 62 282 1.4E-11 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 Pfam PF13286 Phosphohydrolase-associated domain 469 499 6.6E-5 T 29-03-2018 IPR026875 Phosphohydrolase-associated domain CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 Pfam PF01966 HD domain 66 137 3.9E-10 T 29-03-2018 IPR006674 HD domain CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 Gene3D G3DSA:1.10.3410.10 263 390 3.3E-23 T 29-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 Gene3D G3DSA:1.10.3210.10 3 262 6.3E-53 T 29-03-2018 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 SUPERFAMILY SSF109604 251 432 2.08E-67 T 29-03-2018 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 SUPERFAMILY SSF109604 31 134 2.08E-67 T 29-03-2018 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 SUPERFAMILY SSF109604 182 215 2.08E-67 T 29-03-2018 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 SUPERFAMILY SSF109604 483 501 2.08E-67 T 29-03-2018 CKQ55_RS07660 658de43cdb7ce82c0f56ee2d09fc918d 504 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 3.4E-141 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Gene3D G3DSA:3.40.50.300 10 407 2.3E-32 T 29-03-2018 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Gene3D G3DSA:3.40.50.300 415 589 3.7E-30 T 29-03-2018 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 SUPERFAMILY SSF52540 459 584 5.87E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 SUPERFAMILY SSF52540 37 82 5.87E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Gene3D G3DSA:4.10.860.10 613 671 9.8E-17 T 29-03-2018 IPR001943 UVR domain GO:0005515 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Pfam PF00271 Helicase conserved C-terminal domain 439 544 3.1E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 SMART SM00490 460 546 4.7E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 SUPERFAMILY SSF46600 621 667 1.26E-12 T 29-03-2018 IPR001943 UVR domain GO:0005515 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 SMART SM00487 9 425 3.1E-28 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 SUPERFAMILY SSF52540 3 415 1.33E-138 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 2.6E-9 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Pfam PF02151 UvrB/uvrC motif 632 665 7.8E-7 T 29-03-2018 IPR001943 UVR domain GO:0005515 CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 2.2E-21 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CKQ55_RS03320 6c8676a1af1104237edcaed282d8e14b 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 44.33 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 Gene3D G3DSA:3.90.70.10 23 153 5.8E-39 T 29-03-2018 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 Pfam PF03412 Peptidase C39 family 21 149 1.5E-35 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 Gene3D G3DSA:3.40.50.300 480 705 4.9E-57 T 29-03-2018 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 Gene3D G3DSA:1.20.1560.10 154 479 9.6E-41 T 29-03-2018 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 SMART SM00382 518 702 3.1E-21 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 SUPERFAMILY SSF90123 165 475 1.44E-57 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 Pfam PF00664 ABC transporter transmembrane region 177 444 4.1E-43 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 Pfam PF00005 ABC transporter 510 658 1.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS10695 1a8bacb5061844eedc7cffc98bb0c593 707 SUPERFAMILY SSF52540 484 699 1.72E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16670 cec6d4ddce3c90961a0236c8f33ed32a 224 PIRSF PIRSF009467 3 224 8.3E-66 T 29-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CKQ55_RS16670 cec6d4ddce3c90961a0236c8f33ed32a 224 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 224 29.524 T 29-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CKQ55_RS16670 cec6d4ddce3c90961a0236c8f33ed32a 224 Pfam PF01730 UreF 38 181 1.5E-32 T 29-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CKQ55_RS03275 8a1413f12ead8dc42b740352a94e8c11 82 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 82 9.2E-24 T 29-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03275 8a1413f12ead8dc42b740352a94e8c11 82 Pfam PF02597 ThiS family 4 82 1.3E-20 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CKQ55_RS03275 8a1413f12ead8dc42b740352a94e8c11 82 Gene3D G3DSA:3.10.20.30 1 82 1.8E-19 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS03275 8a1413f12ead8dc42b740352a94e8c11 82 SUPERFAMILY SSF54285 1 82 7.48E-23 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF52029 184 376 1.24E-82 T 29-03-2018 IPR027409 GroEL-like apical domain CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:3.50.7.10 184 373 1.3E-95 T 29-03-2018 IPR027409 GroEL-like apical domain CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:1.10.560.10 374 516 9.2E-25 T 29-03-2018 IPR027413 GroEL-like equatorial domain CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-96 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.472 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:1.10.560.10 1 183 4.1E-44 T 29-03-2018 IPR027413 GroEL-like equatorial domain CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF48592 406 521 5.42E-77 T 29-03-2018 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF48592 7 134 5.42E-77 T 29-03-2018 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.4E-254 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF54849 139 203 2.52E-24 T 29-03-2018 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS31430 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 1.1E-37 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 SUPERFAMILY SSF54211 5 115 8.09E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 Gene3D G3DSA:3.30.230.10 1 119 1.5E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.574 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 Pfam PF00825 Ribonuclease P 6 111 1.0E-32 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CKQ55_RS13055 130f9af796fc13d76496d3f0e8901350 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 2.0E-43 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CKQ55_RS19030 7038ef0a626d4ff92f4ec4b4c1db9715 423 Pfam PF02378 Phosphotransferase system, EIIC 34 349 7.7E-46 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS19030 7038ef0a626d4ff92f4ec4b4c1db9715 423 PIRSF PIRSF006351 6 423 4.1E-115 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS19030 7038ef0a626d4ff92f4ec4b4c1db9715 423 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 421 4.6E-93 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS12975 cfd94de84786e715567b7d183cf9cdac 257 Pfam PF00005 ABC transporter 26 181 1.5E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS12975 cfd94de84786e715567b7d183cf9cdac 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 2.8E-121 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CKQ55_RS12975 cfd94de84786e715567b7d183cf9cdac 257 SMART SM00382 35 237 1.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12975 cfd94de84786e715567b7d183cf9cdac 257 Gene3D G3DSA:3.40.50.300 10 255 4.1E-63 T 29-03-2018 CKQ55_RS12975 cfd94de84786e715567b7d183cf9cdac 257 SUPERFAMILY SSF52540 11 243 1.2E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12975 cfd94de84786e715567b7d183cf9cdac 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 PIRSF PIRSF000808 1 341 1.9E-130 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 176 3.0E-71 T 29-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 29-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 SUPERFAMILY SSF54197 4 177 1.7E-74 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 SUPERFAMILY SSF54197 179 345 8.35E-59 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 Gene3D G3DSA:3.30.428.10 165 345 4.8E-59 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 2.0E-72 T 29-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 347 2.2E-208 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CKQ55_RS03490 941ee1e258b1c1e0fe62a1a139d5672c 348 Gene3D G3DSA:3.30.428.10 45 164 9.1E-52 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.7E-56 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.5E-49 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 Gene3D G3DSA:3.40.50.970 334 534 2.8E-49 T 29-03-2018 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.8E-218 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 Gene3D G3DSA:3.40.50.970 1 184 2.6E-62 T 29-03-2018 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 SUPERFAMILY SSF52518 357 546 3.22E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 Gene3D G3DSA:3.40.50.1220 185 333 8.4E-49 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 SUPERFAMILY SSF52467 180 341 9.13E-59 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 SUPERFAMILY SSF52518 1 173 9.9E-63 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS12095 bc80bc4d177fedd5040e7234f16d80e8 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 1.6E-42 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 SMART SM00487 2 186 9.0E-21 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 SMART SM00847 388 476 4.7E-13 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 Pfam PF04408 Helicase associated domain (HA2) 389 462 7.0E-11 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 808 0.0 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 Pfam PF00271 Helicase conserved C-terminal domain 206 327 3.4E-11 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 Gene3D G3DSA:3.40.50.300 3 162 5.6E-23 T 29-03-2018 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 Pfam PF00270 DEAD/DEAH box helicase 19 165 3.3E-9 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 SMART SM00490 226 328 9.0E-14 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 SUPERFAMILY SSF52540 12 428 3.35E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 PIRSF PIRSF005496 1 809 0.0 T 29-03-2018 CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 2.1E-54 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CKQ55_RS07810 353b8a32cb5c9f2eb4a7d9b1ef798d32 809 Gene3D G3DSA:3.40.50.300 180 349 4.3E-43 T 29-03-2018 CKQ55_RS17795 5b98a47116ab27fbf9df7d99a472f795 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 1.2E-20 T 29-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CKQ55_RS17795 5b98a47116ab27fbf9df7d99a472f795 90 Gene3D G3DSA:3.40.630.30 3 90 8.7E-15 T 29-03-2018 CKQ55_RS17795 5b98a47116ab27fbf9df7d99a472f795 90 SUPERFAMILY SSF55729 4 88 3.73E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS11740 e1ebdbb49f40ace51330b37c89e45451 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 446 3.4E-185 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CKQ55_RS11740 e1ebdbb49f40ace51330b37c89e45451 546 SUPERFAMILY SSF56112 94 159 2.91E-50 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS11740 e1ebdbb49f40ace51330b37c89e45451 546 SUPERFAMILY SSF56112 194 438 2.91E-50 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS11740 e1ebdbb49f40ace51330b37c89e45451 546 Pfam PF03109 ABC1 family 116 232 2.6E-34 T 29-03-2018 IPR004147 UbiB domain CKQ55_RS11740 e1ebdbb49f40ace51330b37c89e45451 546 Gene3D G3DSA:3.30.200.20 103 245 1.7E-19 T 29-03-2018 CKQ55_RS11740 e1ebdbb49f40ace51330b37c89e45451 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.543 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CKQ55_RS20990 98ba4563b7b742c8b64b950810c6982c 165 Pfam PF13302 Acetyltransferase (GNAT) domain 8 139 5.8E-25 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS20990 98ba4563b7b742c8b64b950810c6982c 165 Gene3D G3DSA:3.40.630.30 2 165 1.4E-34 T 29-03-2018 CKQ55_RS20990 98ba4563b7b742c8b64b950810c6982c 165 SUPERFAMILY SSF55729 2 163 2.34E-40 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 SUPERFAMILY SSF54980 399 493 2.3E-24 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Pfam PF00679 Elongation factor G C-terminus 399 482 1.7E-19 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 308.559 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 SUPERFAMILY SSF54980 292 370 1.73E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 SUPERFAMILY SSF52540 2 235 2.44E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.6E-52 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Gene3D G3DSA:3.30.70.240 390 549 1.5E-25 T 29-03-2018 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Gene3D G3DSA:2.40.30.10 188 287 9.9E-26 T 29-03-2018 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Gene3D G3DSA:3.40.50.300 1 185 1.3E-36 T 29-03-2018 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Gene3D G3DSA:3.30.70.870 288 367 1.2E-27 T 29-03-2018 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 9.8E-302 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.1E-49 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.0E-11 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS19940 b85549cae37f3b3783e6d38eb50fad86 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 168 4.0E-16 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 SUPERFAMILY SSF49584 139 228 1.22E-18 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 PRINTS PR00969 Pili chaperone signature 99 116 3.3E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 PRINTS PR00969 Pili chaperone signature 70 91 3.3E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 PRINTS PR00969 Pili chaperone signature 127 142 3.3E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 PRINTS PR00969 Pili chaperone signature 161 176 3.3E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 PRINTS PR00969 Pili chaperone signature 21 30 3.3E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 226 4.3E-15 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 SUPERFAMILY SSF49354 15 145 1.6E-38 T 29-03-2018 IPR008962 PapD-like CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 98 115 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 Gene3D G3DSA:2.60.40.10 20 146 4.0E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 Gene3D G3DSA:2.60.40.10 147 233 8.0E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS17840 f3282463fc7b95e8decdfdf358f573d4 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 145 6.5E-42 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 463 1.9E-90 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 Gene3D G3DSA:3.90.76.10 63 175 6.7E-34 T 29-03-2018 CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 Gene3D G3DSA:3.40.190.10 176 311 3.5E-40 T 29-03-2018 CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 SUPERFAMILY SSF53850 35 525 2.99E-150 T 29-03-2018 CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 PIRSF PIRSF002741 1 543 6.2E-114 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 Gene3D G3DSA:3.10.105.10 312 512 9.6E-57 T 29-03-2018 CKQ55_RS24630 fe9a157293f30c5dbcf1d1a7210b2490 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CKQ55_RS05840 b7123bfd9575393a70f501eabd4204ce 215 Pfam PF01618 MotA/TolQ/ExbB proton channel family 76 183 1.9E-26 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CKQ55_RS14000 3491b8f72f8b8b1a5d0cd7be116c271b 275 SMART SM00047 131 257 1.4E-27 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CKQ55_RS14000 3491b8f72f8b8b1a5d0cd7be116c271b 275 Gene3D G3DSA:1.10.530.10 73 273 7.2E-23 T 29-03-2018 CKQ55_RS14000 3491b8f72f8b8b1a5d0cd7be116c271b 275 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 145 268 1.3E-16 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CKQ55_RS05040 9981b7fb3dd0dcad33754b02afd8e5ae 360 Gene3D G3DSA:1.10.3470.10 25 360 2.2E-73 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS05040 9981b7fb3dd0dcad33754b02afd8e5ae 360 Pfam PF01032 FecCD transport family 40 355 5.2E-86 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS05040 9981b7fb3dd0dcad33754b02afd8e5ae 360 SUPERFAMILY SSF81345 23 355 1.83E-80 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS31360 673b8b3e8c3a916f8713cc1ac2fe51df 321 Pfam PF06527 TniQ 8 149 1.4E-26 T 29-03-2018 IPR009492 TniQ CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 3.0E-29 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 3.0E-29 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 3.0E-29 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 Pfam PF02096 60Kd inner membrane protein 354 533 3.9E-60 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 4.5E-114 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 1.3E-68 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 Pfam PF14849 YidC periplasmic domain 60 343 3.3E-87 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.748 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 65 86 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 157 177 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13045 cd35cc9c7ae181fcc97b3ec21ccee625 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 5.8E-107 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CKQ55_RS13360 5ce234fcf67b9c9c036785d6adf3f033 78 Pfam PF07362 Post-segregation antitoxin CcdA 8 78 4.0E-23 T 29-03-2018 IPR009956 Post-segregation antitoxin CcdA CKQ55_RS15250 259d851e2d318b4cb8e2b5cfe56edc91 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 39.827 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CKQ55_RS15250 259d851e2d318b4cb8e2b5cfe56edc91 128 SUPERFAMILY SSF75169 1 128 1.0E-38 T 29-03-2018 IPR027396 DsrEFH-like CKQ55_RS15250 259d851e2d318b4cb8e2b5cfe56edc91 128 Pfam PF02635 DsrE/DsrF-like family 1 128 4.8E-29 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CKQ55_RS15250 259d851e2d318b4cb8e2b5cfe56edc91 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 2.7E-54 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CKQ55_RS15250 259d851e2d318b4cb8e2b5cfe56edc91 128 Gene3D G3DSA:3.40.1260.10 1 128 3.6E-32 T 29-03-2018 CKQ55_RS04735 0bc0e39308c85997cc92c69e2094b0a8 540 SUPERFAMILY SSF81296 147 272 7.46E-32 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS04735 0bc0e39308c85997cc92c69e2094b0a8 540 Gene3D G3DSA:3.40.50.1820 269 517 6.1E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04735 0bc0e39308c85997cc92c69e2094b0a8 540 SUPERFAMILY SSF53474 282 515 7.25E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04735 0bc0e39308c85997cc92c69e2094b0a8 540 Pfam PF11806 Domain of unknown function (DUF3327) 172 273 1.3E-18 T 29-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 CKQ55_RS04735 0bc0e39308c85997cc92c69e2094b0a8 540 Pfam PF00756 Putative esterase 299 514 6.5E-27 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CKQ55_RS04735 0bc0e39308c85997cc92c69e2094b0a8 540 Gene3D G3DSA:2.60.40.10 145 263 5.6E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS26940 e1e46746bf7c7a338192b8e50627a6db 246 Pfam PF13580 SIS domain 7 142 3.7E-37 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS26940 e1e46746bf7c7a338192b8e50627a6db 246 Gene3D G3DSA:3.40.50.10490 1 242 2.5E-40 T 29-03-2018 CKQ55_RS26940 e1e46746bf7c7a338192b8e50627a6db 246 SUPERFAMILY SSF53697 4 205 7.34E-25 T 29-03-2018 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 SUPERFAMILY SSF52954 329 423 2.94E-25 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.2E-45 T 29-03-2018 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 SUPERFAMILY SSF55681 5 318 3.78E-105 T 29-03-2018 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 1.0E-156 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.791 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 Gene3D G3DSA:3.30.930.10 2 325 6.1E-74 T 29-03-2018 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 PIRSF PIRSF001549 2 423 1.4E-129 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 Pfam PF03129 Anticodon binding domain 338 420 6.7E-10 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS20210 c8102729ca7bd4a59568cf9a0cb7de52 424 Gene3D G3DSA:3.40.50.800 328 424 3.8E-17 T 29-03-2018 IPR004154 Anticodon-binding CKQ55_RS12970 3f8e0427096e236838335c513366cd4e 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 2.2E-84 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CKQ55_RS12970 3f8e0427096e236838335c513366cd4e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.8E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS12970 3f8e0427096e236838335c513366cd4e 296 Gene3D G3DSA:1.10.3720.10 16 287 6.3E-36 T 29-03-2018 CKQ55_RS12970 3f8e0427096e236838335c513366cd4e 296 SUPERFAMILY SSF161098 36 286 1.31E-32 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Gene3D G3DSA:3.90.190.20 343 495 1.9E-49 T 29-03-2018 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Gene3D G3DSA:3.40.1390.10 2 104 8.4E-23 T 29-03-2018 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.911 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 7.1E-12 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Pfam PF08245 Mur ligase middle domain 114 318 1.6E-50 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 3.3E-165 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 9.2E-26 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 SUPERFAMILY SSF63418 5 103 2.09E-22 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 SUPERFAMILY SSF53244 339 491 6.11E-52 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 Gene3D G3DSA:3.40.1190.10 105 342 2.6E-53 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08160 01b4b43dc25a3a8bb337bfc465cd260d 495 SUPERFAMILY SSF53623 105 338 1.7E-78 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS27610 04d9416244000dd2c10280de2fafe5d1 46 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 45 4.0E-9 T 29-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS27610 04d9416244000dd2c10280de2fafe5d1 46 Pfam PF08136 30S ribosomal protein subunit S22 family 1 44 8.5E-29 T 29-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS27140 a417289d36e7ae3d701a7ea67f06f882 426 SUPERFAMILY SSF103473 7 414 2.22E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27140 a417289d36e7ae3d701a7ea67f06f882 426 Gene3D G3DSA:1.20.1250.20 7 214 2.8E-8 T 29-03-2018 CKQ55_RS27140 a417289d36e7ae3d701a7ea67f06f882 426 Gene3D G3DSA:1.20.1250.20 220 419 2.0E-12 T 29-03-2018 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 171 5.2E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 SMART SM00421 126 179 0.0019 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 SUPERFAMILY SSF46894 123 171 1.16E-11 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 10 178 5.0E-13 T 29-03-2018 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 2.1E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 2.1E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 2.1E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06815 5b953f49de8f24b4a1281f684a7b32f8 180 Gene3D G3DSA:1.10.10.10 64 179 5.6E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28055 4c7e5b04fd4b1c6428dd8f78e29877aa 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 4.1E-38 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS28055 4c7e5b04fd4b1c6428dd8f78e29877aa 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 325 8.6E-95 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS26760 8c220ed45e67fefdd1c9893699f09210 269 Gene3D G3DSA:3.40.50.300 13 246 3.5E-55 T 29-03-2018 CKQ55_RS26760 8c220ed45e67fefdd1c9893699f09210 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS26760 8c220ed45e67fefdd1c9893699f09210 269 Pfam PF00005 ABC transporter 32 179 1.3E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26760 8c220ed45e67fefdd1c9893699f09210 269 SMART SM00382 41 224 3.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS26760 8c220ed45e67fefdd1c9893699f09210 269 SUPERFAMILY SSF52540 27 244 1.9E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25530 7a78e287aa1159e615450934056f68b2 168 Pfam PF05974 Domain of unknown function (DUF892) 5 155 1.7E-47 T 29-03-2018 IPR010287 Domain of unknown function DUF892 CKQ55_RS25530 7a78e287aa1159e615450934056f68b2 168 SUPERFAMILY SSF47240 5 155 8.11E-45 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS25530 7a78e287aa1159e615450934056f68b2 168 Gene3D G3DSA:1.20.1260.10 2 168 5.8E-31 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS13375 d5ee34cb0785c20dc2e1fc69b54a14be 388 SUPERFAMILY SSF103473 4 379 3.53E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13375 d5ee34cb0785c20dc2e1fc69b54a14be 388 Gene3D G3DSA:1.20.1250.20 201 384 7.5E-17 T 29-03-2018 CKQ55_RS13375 d5ee34cb0785c20dc2e1fc69b54a14be 388 Gene3D G3DSA:1.20.1250.20 2 200 2.1E-31 T 29-03-2018 CKQ55_RS13375 d5ee34cb0785c20dc2e1fc69b54a14be 388 Pfam PF07690 Major Facilitator Superfamily 15 353 7.1E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS13375 d5ee34cb0785c20dc2e1fc69b54a14be 388 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 377 2.0E-84 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 Gene3D G3DSA:1.20.1250.20 255 483 5.0E-10 T 29-03-2018 CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.817 T 29-03-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 SUPERFAMILY SSF103473 305 479 3.66E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 Pfam PF00854 POT family 82 443 5.3E-91 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 2.8E-182 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 Gene3D G3DSA:1.20.1250.20 1 196 9.9E-23 T 29-03-2018 CKQ55_RS14460 64c0ff10d7e6673f554ac3afba413d1c 488 SUPERFAMILY SSF103473 10 293 3.53E-22 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 PIRSF PIRSF002741 2 509 2.6E-112 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 Gene3D G3DSA:3.40.190.10 179 274 2.9E-27 T 29-03-2018 CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 Gene3D G3DSA:3.90.76.10 13 178 2.1E-35 T 29-03-2018 CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 SUPERFAMILY SSF53850 4 508 1.13E-151 T 29-03-2018 CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 54 76 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 Gene3D G3DSA:3.10.105.10 275 481 2.7E-65 T 29-03-2018 CKQ55_RS28100 844bd98792eaed7a5cdc3bb01061bef7 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 48 429 1.8E-101 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS30995 8f696de0f68c61b07c0a2341a7e0161e 76 SUPERFAMILY SSF54786 12 75 1.37E-29 T 29-03-2018 CKQ55_RS30995 8f696de0f68c61b07c0a2341a7e0161e 76 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 5 76 3.0E-29 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CKQ55_RS30995 8f696de0f68c61b07c0a2341a7e0161e 76 Gene3D G3DSA:3.30.160.130 6 74 4.1E-40 T 29-03-2018 CKQ55_RS30995 8f696de0f68c61b07c0a2341a7e0161e 76 Pfam PF06006 Bacterial protein of unknown function (DUF905) 7 74 2.8E-41 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 5.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 5.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 SUPERFAMILY SSF46689 6 68 2.69E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 SUPERFAMILY SSF48498 70 205 2.22E-38 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 Gene3D G3DSA:1.10.10.60 2 67 1.1E-14 T 29-03-2018 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.0E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 96 119 8.8E-55 T 29-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 184 198 8.8E-55 T 29-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 76 95 8.8E-55 T 29-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 22 45 8.8E-55 T 29-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 PRINTS PR00400 Tetracycline repressor protein signature 131 150 8.8E-55 T 29-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 70 202 2.8E-37 T 29-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS28885 bf4765b683c552d5771dd18141372b90 208 Gene3D G3DSA:1.10.357.10 68 207 1.3E-20 T 29-03-2018 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.1E-76 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 Gene3D G3DSA:1.20.1260.10 2 149 1.1E-39 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.1E-80 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 SUPERFAMILY SSF47240 1 154 6.5E-54 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 Pfam PF00210 Ferritin-like domain 9 143 3.6E-38 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CKQ55_RS15295 ed89980713a28afe1dd0131bd32bcf93 158 PIRSF PIRSF002560 1 157 3.7E-71 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CKQ55_RS29095 29da94559ef844b07d7c4cb5ddac2158 318 PIRSF PIRSF000441 132 315 1.7E-53 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CKQ55_RS29095 29da94559ef844b07d7c4cb5ddac2158 318 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 259 289 1.8E-4 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS29095 29da94559ef844b07d7c4cb5ddac2158 318 SUPERFAMILY SSF51161 124 302 2.91E-45 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS29095 29da94559ef844b07d7c4cb5ddac2158 318 Gene3D G3DSA:2.160.10.10 194 314 1.8E-24 T 29-03-2018 CKQ55_RS29095 29da94559ef844b07d7c4cb5ddac2158 318 Gene3D G3DSA:1.10.3130.10 49 193 2.9E-42 T 29-03-2018 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 Pfam PF03441 FAD binding domain of DNA photolyase 272 466 1.4E-82 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 SUPERFAMILY SSF52425 3 196 2.49E-52 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 PRINTS PR00147 DNA photolyase signature 342 360 3.1E-29 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 PRINTS PR00147 DNA photolyase signature 322 338 3.1E-29 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 PRINTS PR00147 DNA photolyase signature 143 159 3.1E-29 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 PRINTS PR00147 DNA photolyase signature 381 395 3.1E-29 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 Gene3D G3DSA:1.10.579.10 290 470 5.2E-73 T 29-03-2018 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 SUPERFAMILY SSF48173 196 471 1.57E-106 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 Gene3D G3DSA:3.40.50.620 1 129 2.0E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS03810 faba5609afd52831af1146993864efad 482 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CKQ55_RS03810 faba5609afd52831af1146993864efad 482 Pfam PF00875 DNA photolyase 5 168 9.5E-44 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 Gene3D G3DSA:1.25.40.80 132 289 1.1E-34 T 29-03-2018 CKQ55_RS03810 faba5609afd52831af1146993864efad 482 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 342 361 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 SUPERFAMILY SSF51735 4 251 1.28E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.5E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.5E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.5E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.5E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.5E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.5E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 Gene3D G3DSA:3.40.50.720 1 37 6.5E-6 T 29-03-2018 CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 Gene3D G3DSA:3.40.50.720 38 252 7.4E-55 T 29-03-2018 CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.4E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.4E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.4E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14340 7ae6059ddba271357698a66b0401765f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.4E-51 T 29-03-2018 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 Gene3D G3DSA:3.40.190.10 202 292 1.1E-8 T 29-03-2018 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 Pfam PF03466 LysR substrate binding domain 146 317 2.4E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 Gene3D G3DSA:3.40.190.10 116 201 1.3E-7 T 29-03-2018 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 SUPERFAMILY SSF46785 27 106 1.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 Gene3D G3DSA:1.10.10.10 26 107 1.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 6.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 68 6.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 68 79 6.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 90 4.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08205 08485456a95011dbc347a28a4e0366fb 322 SUPERFAMILY SSF53850 113 319 2.17E-40 T 29-03-2018 CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.4E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.4E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.4E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 Gene3D G3DSA:3.40.50.720 2 49 1.2E-9 T 29-03-2018 CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 Gene3D G3DSA:3.40.50.720 50 254 6.6E-60 T 29-03-2018 CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 SUPERFAMILY SSF51735 4 253 7.3E-79 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18940 80281ec5b1b29f9caac9fee00af69be5 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 7.4E-61 T 29-03-2018 CKQ55_RS01760 682b14844bf9c1af46a6b653548f58c5 234 SUPERFAMILY SSF53697 6 162 2.11E-17 T 29-03-2018 CKQ55_RS01760 682b14844bf9c1af46a6b653548f58c5 234 Gene3D G3DSA:3.40.50.10490 2 230 1.8E-34 T 29-03-2018 CKQ55_RS01760 682b14844bf9c1af46a6b653548f58c5 234 Pfam PF13580 SIS domain 7 134 1.4E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS30980 86a54e23003ba3c8f63cef1a1920a2ff 86 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 7 71 2.0E-10 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS30980 86a54e23003ba3c8f63cef1a1920a2ff 86 SUPERFAMILY SSF46575 3 83 7.32E-35 T 29-03-2018 CKQ55_RS30980 86a54e23003ba3c8f63cef1a1920a2ff 86 Pfam PF06440 DNA polymerase III, theta subunit 5 73 3.1E-33 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS30980 86a54e23003ba3c8f63cef1a1920a2ff 86 Gene3D G3DSA:1.20.58.250 6 68 9.9E-28 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS23565 592a0796ba33caac49d43eadd463bee0 185 Gene3D G3DSA:3.40.50.880 1 185 3.0E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS23565 592a0796ba33caac49d43eadd463bee0 185 SUPERFAMILY SSF52317 1 180 4.92E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS23565 592a0796ba33caac49d43eadd463bee0 185 Pfam PF01965 DJ-1/PfpI family 2 164 2.0E-28 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS04675 709374faee4e474f25e29ababd22d0d5 394 ProSitePatterns PS00571 Amidases signature. 107 138 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CKQ55_RS04675 709374faee4e474f25e29ababd22d0d5 394 Pfam PF01425 Amidase 20 192 8.3E-52 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS04675 709374faee4e474f25e29ababd22d0d5 394 Pfam PF01425 Amidase 289 379 8.2E-7 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS04675 709374faee4e474f25e29ababd22d0d5 394 Gene3D G3DSA:3.90.1300.10 15 389 4.2E-91 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS04675 709374faee4e474f25e29ababd22d0d5 394 SUPERFAMILY SSF75304 8 388 4.71E-87 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 Pfam PF01636 Phosphotransferase enzyme family 33 263 9.2E-9 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 Gene3D G3DSA:3.90.1200.10 111 397 1.9E-11 T 29-03-2018 CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 Gene3D G3DSA:3.30.200.20 1 110 2.4E-36 T 29-03-2018 CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 SUPERFAMILY SSF56112 1 397 1.6E-90 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 32 396 2.5E-185 T 29-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 PIRSF PIRSF031134 1 399 4.7E-164 T 29-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CKQ55_RS04355 20cba93803921367c178999efbdf551d 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 211.394 T 29-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CKQ55_RS30620 b3faaca2affcfac56d5c11d6e8052ded 189 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 4 183 4.2E-29 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CKQ55_RS30620 b3faaca2affcfac56d5c11d6e8052ded 189 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 24 183 2.5E-31 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CKQ55_RS31795 31ede078b121be09ebca0bbe608cc392 406 Pfam PF01610 Transposase 159 393 1.3E-54 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CKQ55_RS31795 31ede078b121be09ebca0bbe608cc392 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 4.0E-12 T 29-03-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CKQ55_RS31795 31ede078b121be09ebca0bbe608cc392 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 7.0E-10 T 29-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CKQ55_RS22910 31ede078b121be09ebca0bbe608cc392 406 Pfam PF01610 Transposase 159 393 1.3E-54 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CKQ55_RS22910 31ede078b121be09ebca0bbe608cc392 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 4.0E-12 T 29-03-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CKQ55_RS22910 31ede078b121be09ebca0bbe608cc392 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 7.0E-10 T 29-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CKQ55_RS30940 31ede078b121be09ebca0bbe608cc392 406 Pfam PF01610 Transposase 159 393 1.3E-54 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CKQ55_RS30940 31ede078b121be09ebca0bbe608cc392 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 4.0E-12 T 29-03-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CKQ55_RS30940 31ede078b121be09ebca0bbe608cc392 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 7.0E-10 T 29-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger CKQ55_RS04770 d3cf5ba10aec7e18fe732e25f09a67b3 148 Gene3D G3DSA:1.10.357.10 1 148 1.6E-14 T 29-03-2018 CKQ55_RS02780 df5b74b98e27e7e0e8618fea0222ff66 523 Pfam PF12236 Bacteriophage head to tail connecting protein 3 478 1.3E-71 T 29-03-2018 IPR020991 Head-to-tail connector protein, podovirus-type CKQ55_RS10405 b689376bc4f5c68bd7f541ea108d3a8e 91 Gene3D G3DSA:3.30.1660.10 24 91 3.2E-17 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS10405 b689376bc4f5c68bd7f541ea108d3a8e 91 SUPERFAMILY SSF159871 1 91 1.02E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS10405 b689376bc4f5c68bd7f541ea108d3a8e 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 7.7E-15 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.505 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 SUPERFAMILY SSF54631 94 203 5.31E-25 T 29-03-2018 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 SUPERFAMILY SSF51412 217 477 3.01E-125 T 29-03-2018 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 SUPERFAMILY SSF51412 1 90 3.01E-125 T 29-03-2018 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 Gene3D G3DSA:3.20.20.70 1 482 9.1E-115 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.1E-198 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.3E-160 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 Pfam PF00571 CBS domain 95 140 3.0E-9 T 29-03-2018 IPR000644 CBS domain CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 Pfam PF00571 CBS domain 153 202 6.1E-5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 SMART SM01240 7 473 0.0 T 29-03-2018 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 PIRSF PIRSF000130 1 488 6.9E-196 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 SMART SM00116 96 144 2.7E-11 T 29-03-2018 IPR000644 CBS domain CKQ55_RS20260 0f733834b00158e5aef9e87cf1944512 488 SMART SM00116 158 206 3.4E-9 T 29-03-2018 IPR000644 CBS domain CKQ55_RS00860 d392d28dd3e33d1b528cd151523c2e71 402 Gene3D G3DSA:1.20.1250.20 200 396 1.1E-19 T 29-03-2018 CKQ55_RS00860 d392d28dd3e33d1b528cd151523c2e71 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 41.023 T 29-03-2018 IPR022855 Multidrug resistance protein MdtH CKQ55_RS00860 d392d28dd3e33d1b528cd151523c2e71 402 Pfam PF07690 Major Facilitator Superfamily 20 232 1.4E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS00860 d392d28dd3e33d1b528cd151523c2e71 402 SUPERFAMILY SSF103473 14 392 1.44E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS00860 d392d28dd3e33d1b528cd151523c2e71 402 Gene3D G3DSA:1.20.1250.20 13 199 2.7E-26 T 29-03-2018 CKQ55_RS29820 0a937534ed77430bc0b9719c741d68ae 213 Gene3D G3DSA:3.40.50.850 1 213 6.5E-63 T 29-03-2018 CKQ55_RS29820 0a937534ed77430bc0b9719c741d68ae 213 SUPERFAMILY SSF52499 3 212 5.63E-55 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS29820 0a937534ed77430bc0b9719c741d68ae 213 Pfam PF00857 Isochorismatase family 5 206 2.1E-35 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 Pfam PF03330 Lytic transglycolase 78 166 6.1E-19 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 SUPERFAMILY SSF50685 78 160 3.03E-5 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 SUPERFAMILY SSF110997 291 363 2.88E-14 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 Pfam PF05036 Sporulation related domain 291 363 3.9E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 191 5.5E-28 T 29-03-2018 IPR012997 Rare lipoprotein A CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 169 20.61 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 Gene3D G3DSA:3.30.70.1070 293 366 5.4E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS04150 e894ea4509833a8f7b77b6d62e4cdebd 366 Gene3D G3DSA:2.40.40.10 56 169 1.7E-14 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.551 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF56042 817 1033 7.18E-57 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF82697 1 152 1.52E-51 T 29-03-2018 CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Gene3D G3DSA:3.30.1330.10 219 425 5.7E-52 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Gene3D G3DSA:3.30.1330.10 612 813 3.3E-22 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Gene3D G3DSA:3.30.1330.10 183 218 2.8E-4 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF52317 1035 1293 2.29E-99 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Gene3D G3DSA:3.40.50.880 1038 1294 3.0E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 2.2E-104 T 29-03-2018 CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 966 2.2E-16 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 587 7.5E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF55326 618 816 4.45E-67 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF56042 432 615 1.17E-51 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SMART SM01211 1039 1294 6.3E-158 T 29-03-2018 CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF55326 221 428 4.19E-64 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 SUPERFAMILY SSF109736 154 220 3.53E-22 T 29-03-2018 CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Gene3D G3DSA:3.90.650.10 426 609 1.9E-28 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS20015 ab9fae04ac7b1b4eef3642f55d50562a 1295 Gene3D G3DSA:3.90.650.10 819 994 1.2E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.0E-7 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 7.2E-121 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 Pfam PF00005 ABC transporter 20 166 9.7E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 SUPERFAMILY SSF52540 4 237 9.4E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 SMART SM00382 28 231 2.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS15920 eb74bf2eabc473bbbbd8a9983c46a2b4 241 Gene3D G3DSA:3.40.50.300 1 237 1.5E-64 T 29-03-2018 CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 SUPERFAMILY SSF46689 5 72 1.08E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 SUPERFAMILY SSF48498 79 181 1.14E-11 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 2.9E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 Gene3D G3DSA:1.10.357.10 57 182 1.5E-22 T 29-03-2018 CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.3E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.3E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS23175 d662ebfc7f91b5ab1298941325e9acc2 190 Gene3D G3DSA:1.10.10.60 4 56 1.2E-15 T 29-03-2018 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Gene3D G3DSA:3.30.70.1450 367 458 1.4E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Gene3D G3DSA:3.30.70.1450 140 232 9.1E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 SUPERFAMILY SSF51735 1 152 1.09E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 SUPERFAMILY SSF51735 232 376 1.61E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Pfam PF02254 TrkA-N domain 3 111 3.5E-29 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Pfam PF02254 TrkA-N domain 235 350 3.3E-26 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.7E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.7E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.7E-36 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Gene3D G3DSA:3.40.50.720 233 366 1.7E-24 T 29-03-2018 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 SUPERFAMILY SSF116726 390 451 6.41E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 SUPERFAMILY SSF116726 148 226 1.1E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Pfam PF02080 TrkA-C domain 157 225 1.3E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Pfam PF02080 TrkA-C domain 390 451 1.7E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS15470 8a8e96c114a4927e4450bfe04522f6f1 458 Gene3D G3DSA:3.40.50.720 2 139 7.8E-27 T 29-03-2018 CKQ55_RS08405 16370619d52cf45bd4fe79cf384e80b2 177 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 53.624 T 29-03-2018 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CKQ55_RS08405 16370619d52cf45bd4fe79cf384e80b2 177 SUPERFAMILY SSF52218 2 170 1.42E-46 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS08405 16370619d52cf45bd4fe79cf384e80b2 177 Gene3D G3DSA:3.40.50.360 1 176 4.4E-42 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS08405 16370619d52cf45bd4fe79cf384e80b2 177 Pfam PF02525 Flavodoxin-like fold 2 167 7.7E-40 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS27895 1ebfc1ca24fa8fb9a1f4ad30338604ea 179 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 5 43 8.1E-5 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS27895 1ebfc1ca24fa8fb9a1f4ad30338604ea 179 SUPERFAMILY SSF52540 2 98 2.33E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27895 1ebfc1ca24fa8fb9a1f4ad30338604ea 179 SUPERFAMILY SSF52540 127 158 2.33E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27895 1ebfc1ca24fa8fb9a1f4ad30338604ea 179 Gene3D G3DSA:3.40.50.300 2 178 2.2E-16 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Gene3D G3DSA:2.60.34.10 387 528 3.1E-49 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.5E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Gene3D G3DSA:3.30.420.40 20 205 1.4E-57 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Gene3D G3DSA:3.30.420.40 206 247 5.3E-16 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Gene3D G3DSA:3.30.420.40 297 357 3.9E-14 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Gene3D G3DSA:1.20.1270.10 529 615 4.8E-12 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Gene3D G3DSA:3.90.640.10 248 296 6.1E-13 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 5.1E-271 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Pfam PF00012 Hsp70 protein 21 600 6.5E-199 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 SUPERFAMILY SSF53067 200 377 8.43E-52 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 SUPERFAMILY SSF53067 19 196 3.24E-51 T 29-03-2018 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 SUPERFAMILY SSF100934 504 615 2.35E-35 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.812 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CKQ55_RS20140 17aaf6ed7ccba23034653298474c6218 616 SUPERFAMILY SSF100920 384 535 3.4E-50 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CKQ55_RS25620 eb71e8b54f7e1eb5389d4f0726da9a8f 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 3.8E-68 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CKQ55_RS25620 eb71e8b54f7e1eb5389d4f0726da9a8f 135 Gene3D G3DSA:3.10.180.10 1 135 6.2E-36 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS25620 eb71e8b54f7e1eb5389d4f0726da9a8f 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CKQ55_RS25620 eb71e8b54f7e1eb5389d4f0726da9a8f 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.9E-25 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS25620 eb71e8b54f7e1eb5389d4f0726da9a8f 135 SUPERFAMILY SSF54593 1 128 6.85E-34 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS18650 c1a9578a01c097a1de2d0ffd1e16fae6 518 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 6 465 2.2E-97 T 29-03-2018 IPR013381 CRISPR-associated protein Cse1 CKQ55_RS18650 c1a9578a01c097a1de2d0ffd1e16fae6 518 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 5 507 3.9E-169 T 29-03-2018 IPR013381 CRISPR-associated protein Cse1 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 94 455 6.3E-101 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 Gene3D G3DSA:3.90.120.10 310 443 2.5E-23 T 29-03-2018 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 174 186 - T 29-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 93 109 4.8E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 276 289 4.8E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 222 236 4.8E-15 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 92 453 1.2E-74 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 SUPERFAMILY SSF53335 92 456 1.66E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 437 455 - T 29-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CKQ55_RS23390 cc190bb574350dbe2538b4757423b0ff 477 Gene3D G3DSA:3.40.50.150 84 309 1.5E-57 T 29-03-2018 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 Gene3D G3DSA:3.30.470.20 211 444 3.1E-95 T 29-03-2018 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 6.0E-83 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 Gene3D G3DSA:3.40.50.20 1 123 6.9E-51 T 29-03-2018 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-43 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 8.5E-245 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 SUPERFAMILY SSF56059 83 344 5.48E-67 T 29-03-2018 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 SUPERFAMILY SSF51246 331 444 2.3E-43 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.3E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 Gene3D G3DSA:3.30.1490.20 124 210 1.3E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 SUPERFAMILY SSF52440 1 113 1.58E-45 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 SMART SM00878 336 441 1.5E-64 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS29190 2af42f4f6b104c51d63281669263dfec 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS26965 6d216bf74028372fc3a903bc3b36efa8 222 SUPERFAMILY SSF53335 29 204 1.03E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS26965 6d216bf74028372fc3a903bc3b36efa8 222 Gene3D G3DSA:3.40.50.150 3 217 1.3E-31 T 29-03-2018 CKQ55_RS26965 6d216bf74028372fc3a903bc3b36efa8 222 Pfam PF08241 Methyltransferase domain 52 151 2.5E-19 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 SUPERFAMILY SSF52374 3 298 2.39E-112 T 29-03-2018 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Gene3D G3DSA:1.10.1160.10 232 314 1.1E-34 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 5.4E-209 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 SUPERFAMILY SSF48163 299 461 4.58E-45 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Gene3D G3DSA:1.10.10.350 366 472 4.1E-25 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.9E-121 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Gene3D G3DSA:3.40.50.620 119 230 1.1E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.0E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.0E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.0E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.0E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.0E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.841 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Gene3D G3DSA:1.10.8.70 317 360 7.3E-12 T 29-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CKQ55_RS20715 9ae4f1dd46fde2eb19fc835dcfc1563e 472 Gene3D G3DSA:3.40.50.620 3 118 2.3E-41 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS30215 ea0c74422c5d8fa6b023484c41851dde 118 SUPERFAMILY SSF51182 24 113 4.13E-18 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS30215 ea0c74422c5d8fa6b023484c41851dde 118 Pfam PF07883 Cupin domain 36 105 9.7E-13 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS30215 ea0c74422c5d8fa6b023484c41851dde 118 Gene3D G3DSA:2.60.120.10 2 118 2.6E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 SUPERFAMILY SSF54292 1 77 1.09E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 5.9E-203 T 29-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Gene3D G3DSA:3.40.50.740 280 417 2.5E-9 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Pfam PF00384 Molybdopterin oxidoreductase 556 638 1.1E-8 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 SUPERFAMILY SSF54862 82 213 2.93E-34 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 SMART SM00929 88 128 1.9E-19 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 2.3E-11 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 901 8.5E-7 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Gene3D G3DSA:2.20.25.90 235 275 6.8E-10 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Gene3D G3DSA:3.40.50.740 472 702 2.4E-22 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 SUPERFAMILY SSF53706 219 688 1.02E-83 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.3E-11 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 SMART SM00926 221 275 3.3E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Gene3D G3DSA:3.10.20.30 1 154 1.0E-10 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Gene3D G3DSA:3.30.70.20 155 234 3.8E-4 T 29-03-2018 CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 SUPERFAMILY SSF50692 814 902 2.1E-13 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS21140 311b576c841dc6c57879021c09304060 908 Gene3D G3DSA:2.40.40.20 824 904 1.1E-12 T 29-03-2018 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 SUPERFAMILY SSF50129 2 184 1.98E-42 T 29-03-2018 IPR011032 GroES-like CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 Gene3D G3DSA:3.40.50.20 185 253 7.2E-18 T 29-03-2018 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 Gene3D G3DSA:3.40.50.20 254 335 0.13 T 29-03-2018 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 4.5E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 Gene3D G3DSA:3.90.180.10 1 184 1.5E-48 T 29-03-2018 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 SUPERFAMILY SSF51735 142 305 4.6E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 Pfam PF00107 Zinc-binding dehydrogenase 179 299 9.9E-23 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS09905 749fd034c1921e2a8f80a284744833dd 339 SMART SM00829 13 335 3.4E-7 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Gene3D G3DSA:2.40.110.10 236 353 2.0E-16 T 29-03-2018 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 SUPERFAMILY SSF47203 360 515 2.58E-21 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 3.2E-116 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Gene3D G3DSA:1.20.140.10 354 508 5.8E-19 T 29-03-2018 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 4.3E-12 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 141 232 3.9E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Gene3D G3DSA:1.10.540.10 75 235 1.8E-30 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 5.7E-9 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CKQ55_RS07345 c302cb1c24f65a0017acca2c2fced7ef 814 SUPERFAMILY SSF56645 117 355 5.24E-46 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 Gene3D G3DSA:3.40.50.2300 3 144 3.9E-42 T 29-03-2018 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 SMART SM00226 3 141 1.4E-58 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 135 2.0E-41 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 3.6E-29 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 3.6E-29 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 3.6E-29 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 3.6E-29 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 3.6E-29 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CKQ55_RS22600 810f2ab9e53f9220a3c9db812202836f 144 SUPERFAMILY SSF52788 2 142 1.57E-41 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CKQ55_RS07135 891b0b163028dfa4d7d18ea4945a9bf6 542 Gene3D G3DSA:3.40.50.150 17 284 2.1E-28 T 29-03-2018 CKQ55_RS07135 891b0b163028dfa4d7d18ea4945a9bf6 542 Pfam PF13649 Methyltransferase domain 69 163 4.8E-18 T 29-03-2018 CKQ55_RS07135 891b0b163028dfa4d7d18ea4945a9bf6 542 SUPERFAMILY SSF53335 300 541 4.06E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS07135 891b0b163028dfa4d7d18ea4945a9bf6 542 Pfam PF13847 Methyltransferase domain 329 450 6.4E-10 T 29-03-2018 IPR025714 Methyltransferase domain CKQ55_RS07135 891b0b163028dfa4d7d18ea4945a9bf6 542 Gene3D G3DSA:3.40.50.150 295 542 3.1E-39 T 29-03-2018 CKQ55_RS07135 891b0b163028dfa4d7d18ea4945a9bf6 542 SUPERFAMILY SSF53335 42 264 1.51E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 29-03-2018 IPR019808 Histidine triad, conserved site CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 Gene3D G3DSA:3.30.428.10 1 113 1.2E-29 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 PRINTS PR00332 Histidine triad family signature 27 45 8.6E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 PRINTS PR00332 Histidine triad family signature 6 22 8.6E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 PRINTS PR00332 Histidine triad family signature 95 105 8.6E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 Pfam PF01230 HIT domain 12 109 2.2E-29 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS00720 109a44c30c7a5140a2cda930d99b4bdd 118 SUPERFAMILY SSF54197 2 113 4.18E-36 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS01615 8609b00daaafa6ceb36304a405f169fb 409 SUPERFAMILY SSF53383 26 402 9.49E-55 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS01615 8609b00daaafa6ceb36304a405f169fb 409 Gene3D G3DSA:3.90.1150.10 2 113 7.7E-5 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS01615 8609b00daaafa6ceb36304a405f169fb 409 Gene3D G3DSA:3.40.640.10 121 298 1.1E-15 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS01615 8609b00daaafa6ceb36304a405f169fb 409 Pfam PF00155 Aminotransferase class I and II 160 394 4.8E-15 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS01615 8609b00daaafa6ceb36304a405f169fb 409 Gene3D G3DSA:3.90.1150.10 299 409 7.9E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 Hamap MF_01652 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase [mhpA]. 7 554 65.819 T 29-03-2018 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase GO:0008688|GO:0019622|GO:0055114 KEGG: 00360+1.14.13.127|KEGG: 00362+1.14.13.12|KEGG: 00627+1.14.13.12|MetaCyc: PWY-6690 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 SUPERFAMILY SSF51905 17 187 6.2E-69 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 SUPERFAMILY SSF51905 274 388 6.2E-69 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 3.0E-36 T 29-03-2018 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 3.0E-36 T 29-03-2018 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 338 3.0E-36 T 29-03-2018 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 3.0E-36 T 29-03-2018 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 3.0E-36 T 29-03-2018 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 3.0E-36 T 29-03-2018 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 Pfam PF01494 FAD binding domain 16 352 1.7E-81 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 Gene3D G3DSA:3.50.50.60 15 358 1.1E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS25015 99d3c285d97c99809d41cfd116da2ca0 554 Gene3D G3DSA:3.50.50.60 389 554 0.21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 SMART SM00347 21 122 6.4E-21 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 Gene3D G3DSA:1.10.10.10 1 136 1.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 3.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 3.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 3.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 3.9E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 SUPERFAMILY SSF46785 3 135 7.98E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18770 d4507b30c4261ab1e221e153be0ee247 138 Pfam PF01047 MarR family 29 85 2.2E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS21640 42c8a1216b7051f318b509675ea5e7a4 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 7.6E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21640 42c8a1216b7051f318b509675ea5e7a4 341 SUPERFAMILY SSF161098 135 322 1.09E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21640 42c8a1216b7051f318b509675ea5e7a4 341 Gene3D G3DSA:1.10.3720.10 10 328 5.9E-40 T 29-03-2018 CKQ55_RS21640 42c8a1216b7051f318b509675ea5e7a4 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 50 6.5E-6 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS13775 32c423e13701389a33817b30907fcb5b 302 Gene3D G3DSA:3.90.1480.10 48 302 6.7E-41 T 29-03-2018 CKQ55_RS13775 32c423e13701389a33817b30907fcb5b 302 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 62 285 2.0E-7 T 29-03-2018 CKQ55_RS17710 d56d050fdac6318c4afd5553db05f70f 444 Gene3D G3DSA:1.20.1250.20 22 250 7.0E-23 T 29-03-2018 CKQ55_RS17710 d56d050fdac6318c4afd5553db05f70f 444 Pfam PF07690 Major Facilitator Superfamily 34 403 1.6E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS17710 d56d050fdac6318c4afd5553db05f70f 444 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 32 437 6.9E-113 T 29-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CKQ55_RS17710 d56d050fdac6318c4afd5553db05f70f 444 Gene3D G3DSA:1.20.1250.20 251 443 3.8E-21 T 29-03-2018 CKQ55_RS17710 d56d050fdac6318c4afd5553db05f70f 444 SUPERFAMILY SSF103473 18 442 1.7E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01715 787260a9e4729d010601694104901f0b 389 SUPERFAMILY SSF53092 14 155 1.71E-29 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CKQ55_RS01715 787260a9e4729d010601694104901f0b 389 Gene3D G3DSA:3.90.230.10 144 381 9.6E-46 T 29-03-2018 CKQ55_RS01715 787260a9e4729d010601694104901f0b 389 Pfam PF00557 Metallopeptidase family M24 165 373 5.8E-34 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS01715 787260a9e4729d010601694104901f0b 389 SUPERFAMILY SSF55920 157 384 2.49E-55 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS01715 787260a9e4729d010601694104901f0b 389 Pfam PF01321 Creatinase/Prolidase N-terminal domain 23 157 1.7E-20 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CKQ55_RS01715 787260a9e4729d010601694104901f0b 389 Gene3D G3DSA:3.40.350.10 19 143 1.5E-22 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 Pfam PF01306 LacY proton/sugar symporter 5 401 3.2E-126 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 SUPERFAMILY SSF103473 8 400 1.22E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 Gene3D G3DSA:1.20.1250.20 2 201 3.5E-16 T 29-03-2018 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 Gene3D G3DSA:1.20.1250.20 203 404 2.7E-19 T 29-03-2018 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 280 306 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 342 362 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 256 277 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 311 330 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 211 239 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 PRINTS PR00174 LacY proton/sugar symporter family signature 69 98 2.1E-72 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS17925 cac41f814ce50f781e186234a66f31ac 413 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 9 396 7.7E-126 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS21980 535eb5f83228c34295af2b1363057f35 105 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 14 94 5.0E-25 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CKQ55_RS21980 535eb5f83228c34295af2b1363057f35 105 Gene3D G3DSA:3.10.450.160 22 101 2.7E-13 T 29-03-2018 CKQ55_RS21980 535eb5f83228c34295af2b1363057f35 105 Pfam PF11776 Nickel/cobalt transporter regulator 45 94 1.4E-17 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 7 347 1.4E-134 T 29-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 PIRSF PIRSF500176 23 347 6.8E-70 T 29-03-2018 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 PRINTS PR00139 Asparaginase/glutaminase family signature 286 304 4.1E-22 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 PRINTS PR00139 Asparaginase/glutaminase family signature 27 38 4.1E-22 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 PRINTS PR00139 Asparaginase/glutaminase family signature 107 125 4.1E-22 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 108 118 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 Pfam PF00710 Asparaginase, N-terminal 26 217 6.9E-58 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 Gene3D G3DSA:3.40.50.40 239 347 4.5E-25 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 SUPERFAMILY SSF53774 24 346 7.33E-98 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 Gene3D G3DSA:3.40.50.1170 22 235 3.6E-54 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 29 37 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 PIRSF PIRSF001220 21 347 8.1E-82 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS30050 e98d48c239b2677d57a66d81a88de334 347 SMART SM00870 26 341 2.0E-133 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CKQ55_RS13425 0559fcd8898d725bd79f037d05294317 269 PIRSF PIRSF002854 1 269 7.4E-95 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS13425 0559fcd8898d725bd79f037d05294317 269 SUPERFAMILY SSF53850 31 269 2.67E-77 T 29-03-2018 CKQ55_RS13425 0559fcd8898d725bd79f037d05294317 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 13 269 1.6E-142 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS13425 0559fcd8898d725bd79f037d05294317 269 Gene3D G3DSA:3.40.190.10 30 125 1.1E-15 T 29-03-2018 CKQ55_RS13425 0559fcd8898d725bd79f037d05294317 269 Gene3D G3DSA:3.40.190.10 126 269 2.6E-47 T 29-03-2018 CKQ55_RS13425 0559fcd8898d725bd79f037d05294317 269 Pfam PF03180 NLPA lipoprotein 31 269 3.1E-92 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS11220 7176970622eab973359ff0d4f17b9bb6 136 PIRSF PIRSF029598 4 136 5.8E-49 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CKQ55_RS11220 7176970622eab973359ff0d4f17b9bb6 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 1.7E-15 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CKQ55_RS11220 7176970622eab973359ff0d4f17b9bb6 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 24.824 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 PIRSF PIRSF004486 1 312 1.9E-102 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 1.9E-132 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.975 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 SUPERFAMILY SSF81799 114 213 8.89E-35 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 Pfam PF01795 MraW methylase family 5 310 7.4E-121 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 Gene3D G3DSA:3.40.50.150 209 290 0.056 T 29-03-2018 CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 SUPERFAMILY SSF53335 7 113 1.39E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 SUPERFAMILY SSF53335 213 310 1.39E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS08175 66d8875921128a473c862bb9e6a4d479 313 Gene3D G3DSA:1.10.150.170 112 208 1.0E-35 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS03340 70ec84f72963ad55388cf151fdc1620d 251 Gene3D G3DSA:3.40.50.150 2 216 1.6E-32 T 29-03-2018 CKQ55_RS03340 70ec84f72963ad55388cf151fdc1620d 251 SUPERFAMILY SSF53335 10 179 4.53E-39 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS03340 70ec84f72963ad55388cf151fdc1620d 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 3.1E-59 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CKQ55_RS03340 70ec84f72963ad55388cf151fdc1620d 251 Pfam PF08241 Methyltransferase domain 47 138 1.2E-21 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CKQ55_RS03340 70ec84f72963ad55388cf151fdc1620d 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 28.043 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CKQ55_RS14095 6dce5de0c8a1c8b7b150391c8b610abe 426 Gene3D G3DSA:1.20.1250.20 221 419 3.8E-32 T 29-03-2018 CKQ55_RS14095 6dce5de0c8a1c8b7b150391c8b610abe 426 SUPERFAMILY SSF103473 7 415 9.55E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14095 6dce5de0c8a1c8b7b150391c8b610abe 426 Pfam PF07690 Major Facilitator Superfamily 18 257 9.7E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14095 6dce5de0c8a1c8b7b150391c8b610abe 426 Pfam PF07690 Major Facilitator Superfamily 269 416 1.2E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14095 6dce5de0c8a1c8b7b150391c8b610abe 426 Gene3D G3DSA:1.20.1250.20 4 207 1.9E-34 T 29-03-2018 CKQ55_RS17335 0cca2f61e1341657759fef8f1939d16e 194 SUPERFAMILY SSF101327 9 178 1.01E-52 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS17335 0cca2f61e1341657759fef8f1939d16e 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 178 1.6E-39 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS17335 0cca2f61e1341657759fef8f1939d16e 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 19 168 2.5E-12 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS17335 0cca2f61e1341657759fef8f1939d16e 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 8 192 37.19 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS03485 61ac5e7b5e58d240fb12c825192ea5af 338 Gene3D G3DSA:3.90.25.10 208 251 1.1E-12 T 29-03-2018 CKQ55_RS03485 61ac5e7b5e58d240fb12c825192ea5af 338 Gene3D G3DSA:3.90.25.10 252 337 1.0E-21 T 29-03-2018 CKQ55_RS03485 61ac5e7b5e58d240fb12c825192ea5af 338 SUPERFAMILY SSF51735 1 336 5.26E-101 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS03485 61ac5e7b5e58d240fb12c825192ea5af 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 1.6E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS03485 61ac5e7b5e58d240fb12c825192ea5af 338 Gene3D G3DSA:3.40.50.720 1 207 1.6E-44 T 29-03-2018 CKQ55_RS03485 61ac5e7b5e58d240fb12c825192ea5af 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 2.9E-150 T 29-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CKQ55_RS21665 3f7a5809222402717e6e829fbc50c261 235 Pfam PF01569 PAP2 superfamily 97 210 2.0E-12 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS21665 3f7a5809222402717e6e829fbc50c261 235 Gene3D G3DSA:1.20.144.10 7 223 3.8E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS21665 3f7a5809222402717e6e829fbc50c261 235 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 234 40.775 T 29-03-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 CKQ55_RS21665 3f7a5809222402717e6e829fbc50c261 235 SMART SM00014 95 211 4.3E-19 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS21665 3f7a5809222402717e6e829fbc50c261 235 SUPERFAMILY SSF48317 5 221 2.75E-30 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 196 0.0043 T 29-03-2018 CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 Gene3D G3DSA:3.40.50.720 44 259 5.2E-59 T 29-03-2018 CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 Gene3D G3DSA:3.40.50.720 1 43 2.5E-10 T 29-03-2018 CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 Pfam PF00106 short chain dehydrogenase 6 197 4.3E-59 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 SUPERFAMILY SSF51735 4 257 2.7E-78 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 TIGRFAM TIGR02415 23BDH: acetoin reductases 6 259 5.2E-108 T 29-03-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17760 eb17a3c4c2a270c2cea5ee0683271191 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 Gene3D G3DSA:2.60.40.10 162 245 7.2E-27 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 PRINTS PR00969 Pili chaperone signature 177 192 1.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 PRINTS PR00969 Pili chaperone signature 116 133 1.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 PRINTS PR00969 Pili chaperone signature 42 51 1.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 PRINTS PR00969 Pili chaperone signature 87 108 1.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 PRINTS PR00969 Pili chaperone signature 142 157 1.3E-36 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 115 132 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 182 237 2.2E-15 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 SUPERFAMILY SSF49354 41 160 7.06E-42 T 29-03-2018 IPR008962 PapD-like CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 160 9.7E-41 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 SUPERFAMILY SSF49584 154 240 4.97E-22 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS12490 59e147418027eee6b2ea04d330403e63 245 Gene3D G3DSA:2.60.40.10 42 158 8.9E-37 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 SUPERFAMILY SSF53743 1 326 1.41E-125 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 Pfam PF02610 L-arabinose isomerase 5 359 4.0E-179 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 4.0E-171 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 PIRSF PIRSF001478 1 500 2.2E-256 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 SUPERFAMILY SSF50443 329 496 7.06E-71 T 29-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 2.6E-46 T 29-03-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 CKQ55_RS08310 0b9a32756fa6d26a8262696adadc2475 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.844 T 29-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 Pfam PF07687 Peptidase dimerisation domain 183 282 6.6E-18 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 7.7E-23 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 SUPERFAMILY SSF53187 8 185 8.8E-54 T 29-03-2018 CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 SUPERFAMILY SSF53187 316 399 8.8E-54 T 29-03-2018 CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 Gene3D G3DSA:3.40.630.10 6 287 1.0E-50 T 29-03-2018 CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 7 400 1.3E-218 T 29-03-2018 IPR017706 Peptidase M20/DapE, YgeY CKQ55_RS24340 4fbeabeca8f43d2ccc5bb82220fafd48 403 SUPERFAMILY SSF55031 186 282 3.59E-13 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS14745 4323fae8dab039bdd8b280c99b956b7a 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 2.9E-62 T 29-03-2018 CKQ55_RS14745 4323fae8dab039bdd8b280c99b956b7a 198 SUPERFAMILY SSF53335 11 189 2.07E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS14745 4323fae8dab039bdd8b280c99b956b7a 198 Gene3D G3DSA:3.40.50.150 1 198 1.9E-33 T 29-03-2018 CKQ55_RS14745 4323fae8dab039bdd8b280c99b956b7a 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 9.0E-74 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CKQ55_RS14745 4323fae8dab039bdd8b280c99b956b7a 198 PIRSF PIRSF004553 11 191 1.1E-60 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CKQ55_RS26545 f525e6f74bfcac74121238c4610f0d96 176 Gene3D G3DSA:3.40.630.30 2 176 7.0E-30 T 29-03-2018 CKQ55_RS26545 f525e6f74bfcac74121238c4610f0d96 176 SUPERFAMILY SSF55729 6 174 8.78E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS26545 f525e6f74bfcac74121238c4610f0d96 176 Pfam PF13673 Acetyltransferase (GNAT) domain 54 153 3.0E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS01730 72e39afc3008c1d85557c223b49d9c8e 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CKQ55_RS01730 72e39afc3008c1d85557c223b49d9c8e 402 Gene3D G3DSA:3.40.640.10 65 276 1.2E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS01730 72e39afc3008c1d85557c223b49d9c8e 402 Pfam PF00155 Aminotransferase class I and II 34 394 2.3E-66 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS01730 72e39afc3008c1d85557c223b49d9c8e 402 SUPERFAMILY SSF53383 6 400 7.93E-102 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS01730 72e39afc3008c1d85557c223b49d9c8e 402 Gene3D G3DSA:3.90.1150.10 277 402 1.1E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 Gene3D G3DSA:3.90.1150.10 263 380 2.5E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 4 382 1.4E-178 T 29-03-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 PIRSF PIRSF005572 1 380 4.5E-124 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 Pfam PF00266 Aminotransferase class-V 4 365 1.9E-90 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 Gene3D G3DSA:3.40.640.10 12 255 2.2E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS22830 bab030e73d55d5cb3f9a20de66c60d98 400 SUPERFAMILY SSF53383 3 376 1.99E-104 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 Gene3D G3DSA:1.10.357.10 104 211 1.0E-7 T 29-03-2018 CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 SUPERFAMILY SSF48498 96 213 6.88E-15 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 Gene3D G3DSA:1.10.10.60 2 50 4.0E-17 T 29-03-2018 CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 SUPERFAMILY SSF46689 17 94 1.49E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 2.4E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 1.9E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 1.9E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS13400 fe575ea574a576c699407213c178e536 215 Gene3D G3DSA:1.10.260.40 51 103 1.6E-11 T 29-03-2018 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 524 3.5E-270 T 29-03-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 SUPERFAMILY SSF55604 451 524 2.22E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 Gene3D G3DSA:3.30.1360.60 449 524 4.7E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 60 358 7.1E-89 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 Pfam PF02378 Phosphotransferase system, EIIC 10 346 3.3E-71 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 Pfam PF00367 phosphotransferase system, EIIB 454 483 1.7E-11 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS13160 6ae08520da9d3baa1d3d8fc95c761c9f 540 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 510 6.0E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS27190 428a8c2a1a4d154250fe2f68f60d5538 108 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 5 91 6.1E-11 T 29-03-2018 IPR005079 Peptidase C45 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 1 342 2.4E-94 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 1.2E-15 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 7.1E-42 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 SUPERFAMILY SSF55120 3 340 8.34E-100 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 Gene3D G3DSA:3.30.2340.10 167 302 5.2E-25 T 29-03-2018 CKQ55_RS18730 f66b5705a23f44019c4bf9343f6c6720 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 27.962 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS22770 16638ef9551b7605ffbdea7060348f0b 274 SUPERFAMILY SSF51735 2 266 1.22E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22770 16638ef9551b7605ffbdea7060348f0b 274 Gene3D G3DSA:3.40.50.720 2 269 1.1E-21 T 29-03-2018 CKQ55_RS22770 16638ef9551b7605ffbdea7060348f0b 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 1.1E-8 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS04555 6cf06901a1db90fb284321e5223a3d24 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 CKQ55_RS04555 6cf06901a1db90fb284321e5223a3d24 50 Pfam PF01848 Hok/gef family 5 46 5.5E-18 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS04555 6cf06901a1db90fb284321e5223a3d24 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 9.0E-16 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS04555 6cf06901a1db90fb284321e5223a3d24 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 2.5E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS04555 6cf06901a1db90fb284321e5223a3d24 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 2.5E-10 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS18160 04487dbe7240424c3d64105618a5ef77 417 Pfam PF11741 AMIN domain 39 142 7.8E-26 T 29-03-2018 IPR021731 AMIN domain CKQ55_RS18160 04487dbe7240424c3d64105618a5ef77 417 SMART SM00646 250 404 6.1E-69 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CKQ55_RS18160 04487dbe7240424c3d64105618a5ef77 417 Gene3D G3DSA:3.40.630.40 187 409 3.1E-57 T 29-03-2018 CKQ55_RS18160 04487dbe7240424c3d64105618a5ef77 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 4.6E-51 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CKQ55_RS18160 04487dbe7240424c3d64105618a5ef77 417 SUPERFAMILY SSF53187 188 284 4.71E-53 T 29-03-2018 CKQ55_RS18160 04487dbe7240424c3d64105618a5ef77 417 SUPERFAMILY SSF53187 331 407 4.71E-53 T 29-03-2018 CKQ55_RS06995 0a6a0337690ef1e82ab5d4e8feb1907d 408 Pfam PF07690 Major Facilitator Superfamily 27 355 1.6E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS06995 0a6a0337690ef1e82ab5d4e8feb1907d 408 SUPERFAMILY SSF103473 10 391 3.14E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06995 0a6a0337690ef1e82ab5d4e8feb1907d 408 Gene3D G3DSA:1.20.1250.20 207 395 4.6E-16 T 29-03-2018 CKQ55_RS06995 0a6a0337690ef1e82ab5d4e8feb1907d 408 Gene3D G3DSA:1.20.1250.20 4 201 4.8E-15 T 29-03-2018 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 SUPERFAMILY SSF46785 2 111 3.91E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 Gene3D G3DSA:3.40.190.10 175 266 2.9E-12 T 29-03-2018 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 SUPERFAMILY SSF53850 89 293 1.51E-33 T 29-03-2018 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 Gene3D G3DSA:3.40.190.10 88 174 3.6E-19 T 29-03-2018 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 Gene3D G3DSA:1.10.10.10 1 83 7.9E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12070 a608d64cd01e6e22f65aff6d3f59aa29 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 Gene3D G3DSA:1.20.140.10 296 493 9.8E-66 T 29-03-2018 CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 29-03-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 9.3E-65 T 29-03-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 1.1E-93 T 29-03-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 SUPERFAMILY SSF56645 13 282 1.36E-83 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 PIRSF PIRSF500125 1 518 9.0E-288 T 29-03-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 SUPERFAMILY SSF47203 272 494 3.77E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 PIRSF PIRSF000331 11 501 1.9E-203 T 29-03-2018 IPR004925 HpaB/PvcC/4-BUDH CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 Gene3D G3DSA:1.10.3140.10 14 151 3.5E-52 T 29-03-2018 CKQ55_RS09105 93f79ee9b72e64e1bacef4b91c2b25f3 520 Gene3D G3DSA:2.40.110.10 152 283 3.0E-13 T 29-03-2018 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 Pfam PF00072 Response regulator receiver domain 6 120 1.0E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 Gene3D G3DSA:1.10.10.10 132 215 2.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 Gene3D G3DSA:3.40.50.2300 3 131 1.5E-21 T 29-03-2018 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 SUPERFAMILY SSF52172 3 135 2.7E-21 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 SMART SM00448 4 120 5.1E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 SUPERFAMILY SSF46894 146 208 1.87E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 SMART SM00421 148 205 4.2E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21400 5cbc185de9dab8efeeaf0499385fe945 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.771 T 29-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 31.493 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 7.9E-24 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 Gene3D G3DSA:3.40.50.720 110 272 3.2E-29 T 29-03-2018 CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 7.0E-100 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 190 7.3E-9 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 SUPERFAMILY SSF53223 2 101 5.35E-32 T 29-03-2018 CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 SUPERFAMILY SSF51735 102 269 7.04E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15510 938b2aaec39ac98eae3d6d653658afc7 272 Gene3D G3DSA:3.40.50.10860 1 109 9.5E-38 T 29-03-2018 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 Gene3D G3DSA:3.40.50.920 541 663 7.5E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 3.6E-44 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 6.0E-172 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 9.6E-20 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 SUPERFAMILY SSF52922 533 663 1.18E-43 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 Gene3D G3DSA:3.40.50.970 364 540 1.2E-41 T 29-03-2018 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 SUPERFAMILY SSF52518 5 331 9.11E-121 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 Gene3D G3DSA:3.40.50.970 1 363 8.5E-129 T 29-03-2018 CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 SMART SM00861 355 525 5.1E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS17215 77decf8c05431b3daed05496931bdb4f 663 SUPERFAMILY SSF52518 336 526 2.36E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS24435 bc1657a27caba3bdf83715e50badd066 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 3.7E-41 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CKQ55_RS24435 bc1657a27caba3bdf83715e50badd066 130 PIRSF PIRSF005610 1 125 1.1E-26 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CKQ55_RS23100 7d4158ea788f41f2828b7f83057baf27 313 Gene3D G3DSA:2.40.440.10 91 232 2.4E-30 T 29-03-2018 CKQ55_RS23100 7d4158ea788f41f2828b7f83057baf27 313 Gene3D G3DSA:3.10.350.10 39 86 0.0017 T 29-03-2018 CKQ55_RS23100 7d4158ea788f41f2828b7f83057baf27 313 SUPERFAMILY SSF141523 96 145 6.67E-28 T 29-03-2018 CKQ55_RS23100 7d4158ea788f41f2828b7f83057baf27 313 SUPERFAMILY SSF141523 174 231 6.67E-28 T 29-03-2018 CKQ55_RS23100 7d4158ea788f41f2828b7f83057baf27 313 Pfam PF03734 L,D-transpeptidase catalytic domain 97 230 2.6E-18 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CKQ55_RS01330 5525442604da824b20178470ebc27229 310 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 8 307 1.3E-161 T 29-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 CKQ55_RS01330 5525442604da824b20178470ebc27229 310 SUPERFAMILY SSF88713 7 308 3.34E-90 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS01330 5525442604da824b20178470ebc27229 310 Gene3D G3DSA:3.20.20.370 4 310 1.7E-62 T 29-03-2018 CKQ55_RS01330 5525442604da824b20178470ebc27229 310 Pfam PF01522 Polysaccharide deacetylase 78 166 2.1E-10 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CKQ55_RS03745 6833c177ae7aa4190bd726f03daa4120 115 Gene3D G3DSA:1.20.1300.10 1 115 5.2E-18 T 29-03-2018 CKQ55_RS03745 6833c177ae7aa4190bd726f03daa4120 115 SUPERFAMILY SSF81343 5 115 5.45E-30 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03745 6833c177ae7aa4190bd726f03daa4120 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 104 5.9E-6 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03745 6833c177ae7aa4190bd726f03daa4120 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.0E-36 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CKQ55_RS03745 6833c177ae7aa4190bd726f03daa4120 115 PIRSF PIRSF000169 1 115 1.8E-41 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CKQ55_RS05330 f4269588505414d600459fc7c0d2abac 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 58 4.4E-16 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CKQ55_RS05330 f4269588505414d600459fc7c0d2abac 70 Gene3D G3DSA:1.10.10.10 11 69 7.5E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 SUPERFAMILY SSF48498 89 203 8.9E-9 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 64 3.3E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 Gene3D G3DSA:1.10.10.60 8 79 4.1E-13 T 29-03-2018 CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.2E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.2E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 Gene3D G3DSA:1.10.357.10 80 204 6.5E-11 T 29-03-2018 CKQ55_RS01635 fb44a25ade70033477e642ca1803da88 204 SUPERFAMILY SSF46689 11 93 3.23E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS03065 837d3f93c2fb123291277ff6613de49a 304 SUPERFAMILY SSF141523 175 231 2.49E-26 T 29-03-2018 CKQ55_RS03065 837d3f93c2fb123291277ff6613de49a 304 SUPERFAMILY SSF141523 97 147 2.49E-26 T 29-03-2018 CKQ55_RS03065 837d3f93c2fb123291277ff6613de49a 304 Pfam PF03734 L,D-transpeptidase catalytic domain 99 229 2.0E-16 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CKQ55_RS03065 837d3f93c2fb123291277ff6613de49a 304 Gene3D G3DSA:2.40.440.10 92 231 4.9E-28 T 29-03-2018 CKQ55_RS31755 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 1.5E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS31755 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS31405 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 1.5E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS31405 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS11185 b62962b01a6b7d0c6095473d6155459b 429 Gene3D G3DSA:2.40.170.10 26 429 4.0E-155 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS11185 b62962b01a6b7d0c6095473d6155459b 429 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 425 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS11185 b62962b01a6b7d0c6095473d6155459b 429 Hamap MF_01301 Maltoporin [lamB]. 4 429 42.816 T 29-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 CKQ55_RS11185 b62962b01a6b7d0c6095473d6155459b 429 Pfam PF02264 LamB porin 28 429 3.7E-144 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS11185 b62962b01a6b7d0c6095473d6155459b 429 SUPERFAMILY SSF56935 26 429 6.71E-149 T 29-03-2018 CKQ55_RS18495 5551647e3ae25f689047208205101e36 465 Gene3D G3DSA:3.50.50.60 182 455 2.2E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18495 5551647e3ae25f689047208205101e36 465 SUPERFAMILY SSF51905 1 230 1.21E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18495 5551647e3ae25f689047208205101e36 465 Gene3D G3DSA:3.50.50.60 1 181 5.6E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18495 5551647e3ae25f689047208205101e36 465 SUPERFAMILY SSF51905 187 219 1.86E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18495 5551647e3ae25f689047208205101e36 465 SUPERFAMILY SSF51905 298 453 1.86E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18495 5551647e3ae25f689047208205101e36 465 Pfam PF13454 FAD-NAD(P)-binding 8 157 1.2E-29 T 29-03-2018 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 SUPERFAMILY SSF46785 1 86 2.96E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 SUPERFAMILY SSF53850 90 288 4.42E-37 T 29-03-2018 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 Gene3D G3DSA:3.40.190.10 88 176 1.9E-15 T 29-03-2018 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.5E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 Gene3D G3DSA:3.40.190.10 177 264 4.7E-21 T 29-03-2018 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 Gene3D G3DSA:1.10.10.10 1 83 2.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10995 a577156397c0d153ee6b05877bb98855 293 Pfam PF03466 LysR substrate binding domain 89 288 6.9E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 PIRSF PIRSF000437 19 807 0.0 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 33.442 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 PIRSF PIRSF500064 2 807 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 Gene3D G3DSA:3.40.1130.10 236 496 2.5E-34 T 29-03-2018 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 SUPERFAMILY SSF69593 247 482 2.62E-23 T 29-03-2018 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 SMART SM00563 300 427 7.6E-27 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS11165 e1faea5485db0ffd94fc10b2362265d5 807 Pfam PF01553 Acyltransferase 282 424 1.9E-25 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS04905 1cd6c8df916c2a484ce240609d48cc20 287 Pfam PF13560 Helix-turn-helix domain 20 99 1.8E-16 T 29-03-2018 CKQ55_RS04905 1cd6c8df916c2a484ce240609d48cc20 287 Gene3D G3DSA:1.10.260.40 11 111 1.4E-14 T 29-03-2018 CKQ55_RS04905 1cd6c8df916c2a484ce240609d48cc20 287 SUPERFAMILY SSF47413 19 93 1.27E-6 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS04905 1cd6c8df916c2a484ce240609d48cc20 287 SMART SM00530 24 96 1.3E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 SMART SM00357 6 70 1.6E-31 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 PIRSF PIRSF002599 1 70 5.6E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 SUPERFAMILY SSF50249 4 69 5.9E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.4E-32 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 Gene3D G3DSA:2.40.50.140 4 70 2.0E-28 T 29-03-2018 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 PRINTS PR00050 Cold shock protein signature 7 22 5.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 PRINTS PR00050 Cold shock protein signature 28 37 5.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS14070 68c963bca8da55c13e705fb9111912b4 70 PRINTS PR00050 Cold shock protein signature 43 61 5.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 Gene3D G3DSA:3.40.50.300 9 165 1.4E-22 T 29-03-2018 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 Pfam PF13177 DNA polymerase III, delta subunit 10 166 7.2E-41 T 29-03-2018 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 209 320 8.1E-35 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 Gene3D G3DSA:1.10.8.10 169 206 9.5E-15 T 29-03-2018 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 200 4.2E-58 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 SUPERFAMILY SSF48019 209 327 6.97E-34 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 Gene3D G3DSA:1.20.272.10 208 329 3.3E-18 T 29-03-2018 CKQ55_RS00745 1343a9ce3e0928357a35eed6a6b9be73 334 SUPERFAMILY SSF52540 1 206 7.22E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 9.0E-55 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 9.0E-52 T 29-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 Gene3D G3DSA:3.40.35.10 163 319 2.9E-59 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 Pfam PF03830 PTS system sorbose subfamily IIB component 164 311 1.0E-54 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 Pfam PF03610 PTS system fructose IIA component 5 116 8.9E-36 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 SUPERFAMILY SSF53062 3 128 1.31E-37 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 Gene3D G3DSA:3.40.50.510 2 136 1.3E-37 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS23960 0d438044a9d5522a970b8a8bcc773eff 322 SUPERFAMILY SSF52728 162 320 8.89E-54 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS18225 5cfa8ffd1270d2d3841fc87ee47f0fb2 210 Pfam PF06130 Phosphate propanoyltransferase 23 101 2.1E-26 T 29-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CKQ55_RS18225 5cfa8ffd1270d2d3841fc87ee47f0fb2 210 Pfam PF06130 Phosphate propanoyltransferase 131 196 1.5E-18 T 29-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CKQ55_RS18225 5cfa8ffd1270d2d3841fc87ee47f0fb2 210 PIRSF PIRSF010130 1 210 7.7E-87 T 29-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CKQ55_RS18225 5cfa8ffd1270d2d3841fc87ee47f0fb2 210 Gene3D G3DSA:2.40.40.20 125 187 0.065 T 29-03-2018 CKQ55_RS19480 c4dd119bd223b25bb4c452df85ade4ba 257 Gene3D G3DSA:3.40.190.10 134 208 2.2E-7 T 29-03-2018 CKQ55_RS19480 c4dd119bd223b25bb4c452df85ade4ba 257 SUPERFAMILY SSF53850 2 249 4.18E-46 T 29-03-2018 CKQ55_RS19480 c4dd119bd223b25bb4c452df85ade4ba 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 54 67 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS19480 c4dd119bd223b25bb4c452df85ade4ba 257 SMART SM00062 31 253 8.8E-38 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS19480 c4dd119bd223b25bb4c452df85ade4ba 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 243 1.2E-44 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS19480 c4dd119bd223b25bb4c452df85ade4ba 257 Gene3D G3DSA:3.40.190.10 15 133 1.2E-25 T 29-03-2018 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 Pfam PF00245 Alkaline phosphatase 64 431 6.5E-128 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 PRINTS PR00113 Alkaline phosphatase signature 121 136 3.8E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 PRINTS PR00113 Alkaline phosphatase signature 320 349 3.8E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 PRINTS PR00113 Alkaline phosphatase signature 64 84 3.8E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 PRINTS PR00113 Alkaline phosphatase signature 221 231 3.8E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 PRINTS PR00113 Alkaline phosphatase signature 158 178 3.8E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 Gene3D G3DSA:3.40.720.10 24 471 6.6E-128 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 SMART SM00098 65 471 3.0E-218 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 SUPERFAMILY SSF53649 38 470 9.81E-138 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS06575 02841e9c90241dddd21c99c86df328e8 471 ProSitePatterns PS00123 Alkaline phosphatase active site. 121 129 - T 29-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CKQ55_RS31305 de25865a04a96e9cd5aad5b32ded3b17 326 Pfam PF01609 Transposase DDE domain 138 312 6.0E-32 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS31305 de25865a04a96e9cd5aad5b32ded3b17 326 Pfam PF05598 Transposase domain (DUF772) 51 124 3.6E-21 T 29-03-2018 IPR008490 Transposase InsH, N-terminal CKQ55_RS24970 daf841aa8fbb5eb88ea34a7554a72fa3 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS24970 daf841aa8fbb5eb88ea34a7554a72fa3 212 Gene3D G3DSA:1.10.260.40 38 66 2.2E-9 T 29-03-2018 CKQ55_RS24970 daf841aa8fbb5eb88ea34a7554a72fa3 212 Gene3D G3DSA:1.10.10.60 2 37 3.3E-10 T 29-03-2018 CKQ55_RS24970 daf841aa8fbb5eb88ea34a7554a72fa3 212 Gene3D G3DSA:1.10.357.10 67 208 9.9E-17 T 29-03-2018 CKQ55_RS24970 daf841aa8fbb5eb88ea34a7554a72fa3 212 SUPERFAMILY SSF48498 83 203 2.32E-26 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS24970 daf841aa8fbb5eb88ea34a7554a72fa3 212 SUPERFAMILY SSF46689 9 87 2.21E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS24140 88e227e7b312f9d35c6b7afa11d9be1b 203 SUPERFAMILY SSF53955 37 198 1.27E-29 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS24140 88e227e7b312f9d35c6b7afa11d9be1b 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CKQ55_RS24140 88e227e7b312f9d35c6b7afa11d9be1b 203 Gene3D G3DSA:1.10.530.10 21 203 9.4E-30 T 29-03-2018 CKQ55_RS24140 88e227e7b312f9d35c6b7afa11d9be1b 203 Pfam PF01464 Transglycosylase SLT domain 43 168 3.1E-28 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS24140 88e227e7b312f9d35c6b7afa11d9be1b 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 59.451 T 29-03-2018 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 CKQ55_RS01120 fbcbc450d06db067a6fd13b3ad3b2072 440 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 428 1.6E-242 T 29-03-2018 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 CKQ55_RS01120 fbcbc450d06db067a6fd13b3ad3b2072 440 Pfam PF00860 Permease family 30 400 5.1E-100 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS01120 fbcbc450d06db067a6fd13b3ad3b2072 440 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 423 5.3E-113 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS01120 fbcbc450d06db067a6fd13b3ad3b2072 440 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS30885 4b841fc2fc8d0076abad0ae64b1cb3cf 251 SUPERFAMILY SSF46785 144 243 4.49E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS30885 4b841fc2fc8d0076abad0ae64b1cb3cf 251 SUPERFAMILY SSF46785 17 143 9.52E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS30885 4b841fc2fc8d0076abad0ae64b1cb3cf 251 Pfam PF01051 Initiator Replication protein 16 242 7.9E-48 T 29-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CKQ55_RS30885 4b841fc2fc8d0076abad0ae64b1cb3cf 251 Gene3D G3DSA:1.10.10.10 1 155 2.9E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS30885 4b841fc2fc8d0076abad0ae64b1cb3cf 251 Gene3D G3DSA:1.10.10.10 156 251 4.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04390 fd422e01dc4cded705c1fabae06fe0f9 97 SUPERFAMILY SSF143011 2 67 9.81E-11 T 29-03-2018 IPR035095 Toxin RelE-like domain CKQ55_RS04390 fd422e01dc4cded705c1fabae06fe0f9 97 Gene3D G3DSA:3.30.2310.20 1 84 5.8E-9 T 29-03-2018 CKQ55_RS04390 fd422e01dc4cded705c1fabae06fe0f9 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 63 1.2E-5 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 7.2E-24 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 SMART SM00490 262 345 3.0E-9 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 SMART SM00487 1 185 1.1E-16 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 SUPERFAMILY SSF52540 237 363 1.18E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 SUPERFAMILY SSF52540 50 169 1.18E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 Gene3D G3DSA:3.40.50.300 248 364 3.8E-15 T 29-03-2018 CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 SUPERFAMILY SSF57829 423 466 5.49E-7 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 Gene3D G3DSA:3.40.50.300 1 247 7.4E-32 T 29-03-2018 CKQ55_RS21615 34b5cd1158e3d0e0a86f09f181e5fa91 585 Pfam PF00271 Helicase conserved C-terminal domain 241 343 2.3E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 Gene3D G3DSA:1.20.1090.10 160 363 1.5E-42 T 29-03-2018 CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 Gene3D G3DSA:3.40.50.1970 3 159 1.4E-30 T 29-03-2018 CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 7.4E-66 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 PIRSF PIRSF000112 1 360 1.1E-96 T 29-03-2018 CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 SUPERFAMILY SSF56796 3 355 9.55E-89 T 29-03-2018 CKQ55_RS12235 4334d735fb0a64178ef2b03b6e1d601c 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 SMART SM00342 214 298 5.6E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 Gene3D G3DSA:1.10.10.60 205 250 9.7E-8 T 29-03-2018 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 Gene3D G3DSA:2.60.120.10 58 204 5.2E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 SUPERFAMILY SSF46689 249 301 3.05E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 2.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 2.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 Gene3D G3DSA:1.10.10.60 251 302 9.1E-14 T 29-03-2018 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 Pfam PF12833 Helix-turn-helix domain 220 300 4.3E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28580 8f250298a50a7b7ee6b7f0dbaad524d4 302 Pfam PF14525 AraC-binding-like domain 15 186 8.7E-26 T 29-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CKQ55_RS08060 0e5be533a1f206dcae417e3d00151eb6 461 Gene3D G3DSA:3.40.50.300 187 459 1.8E-54 T 29-03-2018 CKQ55_RS08060 0e5be533a1f206dcae417e3d00151eb6 461 SUPERFAMILY SSF52540 78 454 1.1E-89 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08060 0e5be533a1f206dcae417e3d00151eb6 461 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 9 62 6.4E-5 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CKQ55_RS08060 0e5be533a1f206dcae417e3d00151eb6 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS08060 0e5be533a1f206dcae417e3d00151eb6 461 Pfam PF00437 Type II/IV secretion system protein 89 353 2.8E-81 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CKQ55_RS08060 0e5be533a1f206dcae417e3d00151eb6 461 Gene3D G3DSA:3.30.450.90 50 186 9.0E-41 T 29-03-2018 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 4.6E-15 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 SUPERFAMILY SSF55681 162 502 8.36E-122 T 29-03-2018 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 PIRSF PIRSF039101 1 505 1.8E-205 T 29-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 4.5E-238 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 Gene3D G3DSA:2.40.50.140 15 154 2.9E-40 T 29-03-2018 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.6E-83 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 Gene3D G3DSA:3.30.930.10 156 501 4.3E-104 T 29-03-2018 CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 SUPERFAMILY SSF50249 13 155 4.9E-47 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS05140 9aff96465a4a19e2a9ecde874a878654 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.357 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 Gene3D G3DSA:3.40.50.1240 1 214 5.8E-53 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 58.439 T 29-03-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 PIRSF PIRSF000709 2 173 6.4E-8 T 29-03-2018 CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 SUPERFAMILY SSF53254 1 208 1.44E-56 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 6.7E-57 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS08720 6bdfc9f81f38eabd2f3d7da22ab98412 215 SMART SM00855 3 157 1.7E-20 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS26570 c8c10046291e5d217d8882077b0a0c55 266 SUPERFAMILY SSF56281 22 249 3.54E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS26570 c8c10046291e5d217d8882077b0a0c55 266 Pfam PF00753 Metallo-beta-lactamase superfamily 25 85 1.3E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS26570 c8c10046291e5d217d8882077b0a0c55 266 SMART SM00849 25 241 7.0E-4 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS26570 c8c10046291e5d217d8882077b0a0c55 266 Gene3D G3DSA:3.60.15.10 14 250 6.2E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS01810 c2bc501c46531c9170fd841a9efee38e 262 SUPERFAMILY SSF46689 215 262 3.49E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01810 c2bc501c46531c9170fd841a9efee38e 262 SMART SM00342 180 262 1.8E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01810 c2bc501c46531c9170fd841a9efee38e 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 258 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01810 c2bc501c46531c9170fd841a9efee38e 262 Gene3D G3DSA:1.10.10.60 95 212 0.0027 T 29-03-2018 CKQ55_RS01810 c2bc501c46531c9170fd841a9efee38e 262 Pfam PF12833 Helix-turn-helix domain 187 262 5.2E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01810 c2bc501c46531c9170fd841a9efee38e 262 Gene3D G3DSA:1.10.10.60 213 262 1.3E-8 T 29-03-2018 CKQ55_RS00595 c9e270135c93d99212c9f1ae4e5a2561 152 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 2.3E-44 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS00595 c9e270135c93d99212c9f1ae4e5a2561 152 Gene3D G3DSA:3.40.1400.10 1 152 8.6E-56 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS00595 c9e270135c93d99212c9f1ae4e5a2561 152 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 143 4.9E-42 T 29-03-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CKQ55_RS00595 c9e270135c93d99212c9f1ae4e5a2561 152 PIRSF PIRSF005384 2 149 5.1E-52 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS00595 c9e270135c93d99212c9f1ae4e5a2561 152 Pfam PF02502 Ribose/Galactose Isomerase 4 142 1.9E-49 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS00595 c9e270135c93d99212c9f1ae4e5a2561 152 SUPERFAMILY SSF89623 2 146 2.88E-50 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS20085 34d3c09e1ee591eed4bea82e99fadba6 377 Gene3D G3DSA:1.20.1250.20 5 193 1.3E-13 T 29-03-2018 CKQ55_RS20085 34d3c09e1ee591eed4bea82e99fadba6 377 SUPERFAMILY SSF103473 7 371 1.83E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20085 34d3c09e1ee591eed4bea82e99fadba6 377 Gene3D G3DSA:1.20.1250.20 194 372 1.5E-11 T 29-03-2018 CKQ55_RS20085 34d3c09e1ee591eed4bea82e99fadba6 377 PIRSF PIRSF004925 1 377 3.9E-116 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter CKQ55_RS20085 34d3c09e1ee591eed4bea82e99fadba6 377 Pfam PF12832 MFS_1 like family 8 358 5.7E-45 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.1E-43 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 PIRSF PIRSF000497 1 382 3.4E-177 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Gene3D G3DSA:3.30.300.10 11 133 1.3E-44 T 29-03-2018 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 SUPERFAMILY SSF55973 112 232 3.77E-52 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.126 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 SUPERFAMILY SSF55973 233 382 2.12E-71 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Gene3D G3DSA:3.30.300.10 246 383 2.2E-50 T 29-03-2018 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 6.3E-70 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Gene3D G3DSA:3.30.300.10 134 233 1.2E-43 T 29-03-2018 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 2.1E-201 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 6.3E-46 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS17185 93b2b31765b7c9104c97e14e3f03ef52 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.9E-69 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 Gene3D G3DSA:3.40.190.10 13 144 4.4E-37 T 29-03-2018 CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 SMART SM00079 22 243 5.3E-5 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 2.5E-93 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 Gene3D G3DSA:3.40.190.10 145 243 3.1E-18 T 29-03-2018 CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 SMART SM00062 22 243 2.0E-87 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS02355 6eeec66016f325aedf48419c048697ea 243 SUPERFAMILY SSF53850 1 242 1.47E-73 T 29-03-2018 CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 355 388 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 PRINTS PR01032 Gene IV protein signature 271 294 4.8E-8 T 29-03-2018 CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 PRINTS PR01032 Gene IV protein signature 230 253 4.8E-8 T 29-03-2018 CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 PRINTS PR01032 Gene IV protein signature 337 365 4.8E-8 T 29-03-2018 CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 23 409 3.0E-120 T 29-03-2018 IPR013355 Type IV pilus secretin PilQ CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 392 1.1E-11 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 411 1.1E-11 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 246 270 1.1E-11 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 Pfam PF00263 Bacterial type II and III secretion system protein 250 409 5.2E-46 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 Pfam PF03958 Bacterial type II/III secretion system short domain 121 179 4.9E-9 T 29-03-2018 IPR005644 NolW-like CKQ55_RS15050 4c60dfb5e07c1e9cf1bd133d9b14c13e 412 SMART SM00965 46 94 0.0027 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 SUPERFAMILY SSF103473 15 459 9.02E-73 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 Pfam PF00083 Sugar (and other) transporter 26 459 8.4E-132 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 330 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 PRINTS PR00171 Sugar transporter signature 362 383 2.8E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 PRINTS PR00171 Sugar transporter signature 33 43 2.8E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 PRINTS PR00171 Sugar transporter signature 269 279 2.8E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 PRINTS PR00171 Sugar transporter signature 116 135 2.8E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 PRINTS PR00171 Sugar transporter signature 385 397 2.8E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 Gene3D G3DSA:1.20.1250.20 13 216 6.5E-38 T 29-03-2018 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 457 1.8E-146 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17915 c604dc9816b373d5524a6a871fb0a43f 472 Gene3D G3DSA:1.20.1250.20 233 471 2.9E-34 T 29-03-2018 CKQ55_RS15245 803bd7f019b49155f2834434f0e89c1a 240 Pfam PF13309 HTH domain 171 228 3.3E-19 T 29-03-2018 CKQ55_RS15245 803bd7f019b49155f2834434f0e89c1a 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 2.0E-67 T 29-03-2018 IPR013559 YheO-like CKQ55_RS15245 803bd7f019b49155f2834434f0e89c1a 240 Gene3D G3DSA:1.10.10.60 185 239 3.9E-6 T 29-03-2018 CKQ55_RS15245 803bd7f019b49155f2834434f0e89c1a 240 Pfam PF08348 YheO-like PAS domain 29 137 4.7E-36 T 29-03-2018 IPR013559 YheO-like CKQ55_RS11135 f9d25819cdcb7d9d9433b361fbe09252 162 SUPERFAMILY SSF51182 31 155 9.37E-23 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS11135 f9d25819cdcb7d9d9433b361fbe09252 162 Gene3D G3DSA:2.60.120.10 8 161 6.6E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS11135 f9d25819cdcb7d9d9433b361fbe09252 162 Pfam PF07883 Cupin domain 47 118 9.0E-18 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS29500 4ffe1b437f7f77a48da8d136b36a457b 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 6.3E-77 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CKQ55_RS29500 4ffe1b437f7f77a48da8d136b36a457b 206 SUPERFAMILY SSF55821 1 204 3.05E-65 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS29500 4ffe1b437f7f77a48da8d136b36a457b 206 Pfam PF01300 Telomere recombination 23 198 1.2E-44 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CKQ55_RS29500 4ffe1b437f7f77a48da8d136b36a457b 206 Gene3D G3DSA:3.90.870.10 1 205 4.2E-59 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 Gene3D G3DSA:3.40.50.720 3 246 2.4E-44 T 29-03-2018 CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 9.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 9.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.6E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.6E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.6E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.6E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 SUPERFAMILY SSF51735 5 257 1.01E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS25505 06b56b2b48d8e9d51d0b53524a9fedb9 329 Pfam PF00106 short chain dehydrogenase 3 190 6.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 1.4E-202 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 Gene3D G3DSA:3.40.720.10 226 406 4.9E-11 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.673 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 SUPERFAMILY SSF53649 1 114 2.75E-69 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 SUPERFAMILY SSF53649 236 407 2.75E-69 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 SUPERFAMILY SSF143856 117 235 2.48E-50 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 Gene3D G3DSA:3.40.720.10 1 125 1.1E-19 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 Gene3D G3DSA:3.30.70.1250 126 225 1.1E-51 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 Pfam PF01676 Metalloenzyme superfamily 2 398 1.4E-44 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CKQ55_RS08780 625b267612240cca0dd464fa4d63284e 407 PIRSF PIRSF001491 1 407 4.1E-164 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CKQ55_RS16775 f500665ec2601451ec9d9cf52f4ca79c 256 Pfam PF02535 ZIP Zinc transporter 103 245 4.1E-24 T 29-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CKQ55_RS14175 f3982eab7dc9b615dca1c4e4961cb4df 339 Gene3D G3DSA:1.10.3720.10 3 325 1.1E-46 T 29-03-2018 CKQ55_RS14175 f3982eab7dc9b615dca1c4e4961cb4df 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 8.5E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14175 f3982eab7dc9b615dca1c4e4961cb4df 339 SUPERFAMILY SSF161098 89 160 8.18E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14175 f3982eab7dc9b615dca1c4e4961cb4df 339 SUPERFAMILY SSF161098 200 322 8.18E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08530 53551d933de77b0a92b6425ee378b9bb 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.001 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CKQ55_RS08530 53551d933de77b0a92b6425ee378b9bb 316 Pfam PF02401 LytB protein 3 282 8.2E-92 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CKQ55_RS08530 53551d933de77b0a92b6425ee378b9bb 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 3.4E-98 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CKQ55_RS08530 53551d933de77b0a92b6425ee378b9bb 316 Gene3D G3DSA:3.40.50.1220 68 282 6.0E-4 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 Gene3D G3DSA:1.10.10.10 117 191 1.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 SMART SM00421 133 190 4.6E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 6.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 6.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 6.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 Pfam PF00072 Response regulator receiver domain 4 113 5.9E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 Gene3D G3DSA:3.40.50.2300 2 116 3.2E-22 T 29-03-2018 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 SUPERFAMILY SSF52172 6 120 3.7E-27 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 189 7.9E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 SMART SM00448 2 113 1.1E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 ProSitePatterns PS00622 LuxR-type HTH domain signature. 150 177 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS27015 654543d32d15ed27883a238139adbab7 195 SUPERFAMILY SSF46894 129 190 5.44E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS12415 12639e77888b9182a2bf8551911d848f 459 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 53 5.4E-13 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CKQ55_RS12415 12639e77888b9182a2bf8551911d848f 459 SUPERFAMILY SSF56935 316 459 1.22E-6 T 29-03-2018 CKQ55_RS12415 12639e77888b9182a2bf8551911d848f 459 SUPERFAMILY SSF56935 98 260 1.22E-6 T 29-03-2018 CKQ55_RS12415 12639e77888b9182a2bf8551911d848f 459 Pfam PF16966 Porin-like glycoporin RafY 101 459 3.1E-175 T 29-03-2018 IPR016963 Glycoporin RafY CKQ55_RS24415 40411f5c85e047157d15d96512693652 203 Gene3D G3DSA:2.50.20.10 26 203 1.3E-55 T 29-03-2018 CKQ55_RS24415 40411f5c85e047157d15d96512693652 203 Pfam PF03550 Outer membrane lipoprotein LolB 46 200 2.4E-48 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CKQ55_RS24415 40411f5c85e047157d15d96512693652 203 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 202 29.335 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CKQ55_RS24415 40411f5c85e047157d15d96512693652 203 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 202 2.0E-87 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CKQ55_RS24415 40411f5c85e047157d15d96512693652 203 SUPERFAMILY SSF89392 30 202 4.71E-54 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 Gene3D G3DSA:2.160.10.10 2 188 9.2E-53 T 29-03-2018 CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 SMART SM01266 5 59 1.1E-22 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 SUPERFAMILY SSF51161 2 183 3.19E-54 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 Pfam PF12464 Maltose acetyltransferase 7 57 1.0E-17 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0038 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 162 8.8E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS05975 b6ebf18f4fa93484804be8523d11afdc 188 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 Pfam PF16485 Protealysin propeptide 9 48 3.0E-18 T 29-03-2018 IPR032475 Protealysin, N-terminal propeptide CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 Gene3D G3DSA:1.10.390.10 175 341 2.8E-54 T 29-03-2018 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 SUPERFAMILY SSF55486 63 340 9.08E-82 T 29-03-2018 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 86 170 8.7E-29 T 29-03-2018 IPR013856 Peptidase M4 domain GO:0004222 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 Gene3D G3DSA:3.10.170.10 2 174 3.1E-59 T 29-03-2018 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 173 340 1.6E-49 T 29-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 161 177 1.3E-28 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 182 193 1.3E-28 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 125 145 1.3E-28 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CKQ55_RS20250 20fee738dfee8a1e0a84cf0e43e02502 342 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 263 279 1.3E-28 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 CKQ55_RS30265 78bb517c5d11adaa69091260623dbee7 137 Gene3D G3DSA:2.10.109.10 19 133 2.3E-20 T 29-03-2018 CKQ55_RS30265 78bb517c5d11adaa69091260623dbee7 137 SUPERFAMILY SSF51306 13 131 4.53E-31 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS30265 78bb517c5d11adaa69091260623dbee7 137 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 50 60 1.9E-10 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30265 78bb517c5d11adaa69091260623dbee7 137 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 89 101 1.9E-10 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30265 78bb517c5d11adaa69091260623dbee7 137 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 61 72 1.9E-10 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30265 78bb517c5d11adaa69091260623dbee7 137 Pfam PF00717 Peptidase S24-like 55 115 4.1E-11 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 SUPERFAMILY SSF118215 19 400 3.92E-95 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 7 408 36.065 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 Gene3D G3DSA:1.10.3860.10 8 410 1.5E-74 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 PRINTS PR00173 Glutamate-aspartate symporter signature 19 39 8.2E-14 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 PRINTS PR00173 Glutamate-aspartate symporter signature 189 208 8.2E-14 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 PRINTS PR00173 Glutamate-aspartate symporter signature 326 345 8.2E-14 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 PRINTS PR00173 Glutamate-aspartate symporter signature 291 317 8.2E-14 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 PRINTS PR00173 Glutamate-aspartate symporter signature 353 373 8.2E-14 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS16395 0169cdb2a2fdc18e36b6794336977553 415 Pfam PF00375 Sodium:dicarboxylate symporter family 19 398 3.1E-64 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS18775 782b69a124a5807056a2e5ee6b3380bd 197 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 189 51.917 T 29-03-2018 IPR032901 Probable UbiX-like flavin prenyltransferase CKQ55_RS18775 782b69a124a5807056a2e5ee6b3380bd 197 SUPERFAMILY SSF52507 1 185 6.8E-62 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS18775 782b69a124a5807056a2e5ee6b3380bd 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 185 36.131 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CKQ55_RS18775 782b69a124a5807056a2e5ee6b3380bd 197 Pfam PF02441 Flavoprotein 1 164 2.0E-24 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS18775 782b69a124a5807056a2e5ee6b3380bd 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 1.7E-72 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CKQ55_RS18775 782b69a124a5807056a2e5ee6b3380bd 197 Gene3D G3DSA:3.40.50.1950 1 197 6.6E-54 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.2E-42 T 29-03-2018 IPR003111 Lon, substrate-binding domain CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 SUPERFAMILY SSF54211 595 772 2.31E-59 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 29-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.309 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Gene3D G3DSA:2.30.130.40 1 118 3.3E-31 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 PIRSF PIRSF001174 1 775 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.5E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 SMART SM00382 348 492 5.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 SMART SM00464 10 202 2.1E-87 T 29-03-2018 IPR003111 Lon, substrate-binding domain CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 SUPERFAMILY SSF88697 10 201 4.47E-52 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Gene3D G3DSA:1.10.4060.10 122 211 2.1E-31 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Gene3D G3DSA:3.40.50.300 313 490 8.2E-30 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 SUPERFAMILY SSF52540 313 587 1.63E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.1E-97 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Gene3D G3DSA:1.10.8.60 491 584 1.4E-31 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 Gene3D G3DSA:3.30.230.10 585 772 3.0E-70 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 2.5E-57 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 2.5E-57 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 2.5E-57 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 2.5E-57 T 29-03-2018 CKQ55_RS06190 233b5ea9eec5d58f6a1e43b5674a0c0a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 2.5E-57 T 29-03-2018 CKQ55_RS08150 30c2e1c229023ff6df611749ad61c2c1 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08150 30c2e1c229023ff6df611749ad61c2c1 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.0E-161 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08150 30c2e1c229023ff6df611749ad61c2c1 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08150 30c2e1c229023ff6df611749ad61c2c1 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08150 30c2e1c229023ff6df611749ad61c2c1 360 Pfam PF00953 Glycosyl transferase family 4 99 284 4.5E-34 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CKQ55_RS08150 30c2e1c229023ff6df611749ad61c2c1 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.815 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 Gene3D G3DSA:3.90.1260.10 178 374 7.2E-55 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 4.3E-166 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 SUPERFAMILY SSF52402 3 186 1.86E-34 T 29-03-2018 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 Gene3D G3DSA:1.10.287.400 378 437 1.6E-27 T 29-03-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 75.594 T 29-03-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 Pfam PF00764 Arginosuccinate synthase 16 408 1.3E-56 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 SUPERFAMILY SSF69864 190 444 2.09E-79 T 29-03-2018 CKQ55_RS16065 e5bd2355c278188ec4e542e142379052 447 Gene3D G3DSA:3.40.50.620 2 177 1.7E-18 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS24080 3ed199997d7923b6dfacadde615ec8fc 93 Pfam PF05166 YcgL domain 3 75 3.1E-31 T 29-03-2018 IPR027354 YcgL domain CKQ55_RS24080 3ed199997d7923b6dfacadde615ec8fc 93 SUPERFAMILY SSF160191 1 91 5.62E-39 T 29-03-2018 CKQ55_RS24080 3ed199997d7923b6dfacadde615ec8fc 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 9.0E-35 T 29-03-2018 IPR027354 YcgL domain CKQ55_RS24080 3ed199997d7923b6dfacadde615ec8fc 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.657 T 29-03-2018 IPR027354 YcgL domain CKQ55_RS19015 bbf906b65fe84f4c70837ec24d2aceb7 104 SUPERFAMILY SSF46973 1 98 4.58E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS19015 bbf906b65fe84f4c70837ec24d2aceb7 104 PIRSF PIRSF000699 1 101 2.9E-35 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS19015 bbf906b65fe84f4c70837ec24d2aceb7 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 3.4E-33 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS19015 bbf906b65fe84f4c70837ec24d2aceb7 104 Gene3D G3DSA:1.20.58.80 1 99 1.5E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.8E-27 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 PIRSF PIRSF009393 1 712 2.3E-276 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 Gene3D G3DSA:3.40.640.10 130 424 1.1E-28 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 SUPERFAMILY SSF53383 130 562 8.05E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.3E-46 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 Gene3D G3DSA:3.90.1150.10 425 594 1.1E-54 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 Gene3D G3DSA:3.90.100.10 595 712 1.6E-36 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 SUPERFAMILY SSF55904 567 708 1.31E-42 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 544 3.4E-190 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CKQ55_RS07520 de69ec0d4160a57e3af89761df3fc3cc 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 SMART SM00354 1 71 3.3E-26 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 SUPERFAMILY SSF53822 61 328 1.16E-36 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.8E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.8E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 Gene3D G3DSA:3.40.50.2300 164 331 1.4E-18 T 29-03-2018 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 Gene3D G3DSA:1.10.260.40 3 56 2.2E-18 T 29-03-2018 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 Pfam PF13377 Periplasmic binding protein-like domain 166 328 8.3E-19 T 29-03-2018 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 SUPERFAMILY SSF47413 1 57 4.97E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 Gene3D G3DSA:3.40.50.2300 57 163 2.2E-17 T 29-03-2018 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.6E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12435 3ab96b5cfbe7671e44439666f50003e0 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS23555 faa37d2f397b090fc372e4f82e8ce1c1 520 Gene3D G3DSA:1.20.1250.20 235 460 6.7E-10 T 29-03-2018 CKQ55_RS23555 faa37d2f397b090fc372e4f82e8ce1c1 520 Pfam PF13347 MFS/sugar transport protein 25 458 2.3E-53 T 29-03-2018 CKQ55_RS23555 faa37d2f397b090fc372e4f82e8ce1c1 520 SUPERFAMILY SSF103473 23 453 1.44E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23555 faa37d2f397b090fc372e4f82e8ce1c1 520 Gene3D G3DSA:1.20.1250.20 17 228 1.4E-16 T 29-03-2018 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Pfam PF13291 ACT domain 665 741 1.0E-18 T 29-03-2018 IPR002912 ACT domain CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Gene3D G3DSA:3.30.70.260 661 742 4.3E-12 T 29-03-2018 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 4.2E-36 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Gene3D G3DSA:3.10.20.30 401 476 1.4E-24 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 SUPERFAMILY SSF109604 24 207 1.0E-43 T 29-03-2018 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 SMART SM00954 251 361 5.4E-66 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 SUPERFAMILY SSF81301 196 411 2.78E-63 T 29-03-2018 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 SUPERFAMILY SSF55021 666 742 8.86E-15 T 29-03-2018 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 740 1.0E-185 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Pfam PF13328 HD domain 51 191 2.9E-37 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Gene3D G3DSA:3.30.460.10 208 341 1.4E-42 T 29-03-2018 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 SUPERFAMILY SSF81271 400 466 5.23E-22 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CKQ55_RS18585 5d8600d1ee735d560f93b4ef46bbc729 745 Pfam PF02824 TGS domain 407 466 2.1E-21 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CKQ55_RS30340 7a9a1501a15b93003d3c4d2f5401d84e 203 Pfam PF11140 Protein of unknown function (DUF2913) 9 172 1.1E-29 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 CKQ55_RS19470 53efc0be3e9c5d9cbd0671ebb2b5df18 364 Pfam PF00419 Fimbrial protein 214 363 5.6E-14 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS19470 53efc0be3e9c5d9cbd0671ebb2b5df18 364 SUPERFAMILY SSF49401 215 364 7.46E-19 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS19470 53efc0be3e9c5d9cbd0671ebb2b5df18 364 Gene3D G3DSA:2.60.40.1090 207 364 8.0E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 SUPERFAMILY SSF53850 88 294 3.07E-41 T 29-03-2018 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 Pfam PF03466 LysR substrate binding domain 90 293 6.7E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 Gene3D G3DSA:1.10.10.10 1 83 1.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 Gene3D G3DSA:3.40.190.10 180 267 1.8E-18 T 29-03-2018 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 Gene3D G3DSA:3.40.190.10 90 179 7.8E-22 T 29-03-2018 CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 SUPERFAMILY SSF46785 11 112 4.84E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23095 5dc3e844ad0e1eec873e78a4de5aefcb 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.0E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20310 723ab55bc5791618e56a68770c14ef7f 484 Pfam PF13347 MFS/sugar transport protein 9 420 7.2E-67 T 29-03-2018 CKQ55_RS20310 723ab55bc5791618e56a68770c14ef7f 484 Gene3D G3DSA:1.20.1250.20 1 190 1.5E-15 T 29-03-2018 CKQ55_RS20310 723ab55bc5791618e56a68770c14ef7f 484 SUPERFAMILY SSF103473 5 418 6.41E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20310 723ab55bc5791618e56a68770c14ef7f 484 Gene3D G3DSA:1.20.1250.20 200 423 8.8E-14 T 29-03-2018 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Gene3D G3DSA:1.10.860.10 434 581 3.1E-36 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Gene3D G3DSA:3.90.580.10 1 102 3.0E-35 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.448 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 5.8E-43 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Pfam PF13155 Toprim-like 263 348 5.6E-14 T 29-03-2018 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 SMART SM00400 36 90 7.6E-38 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 SUPERFAMILY SSF57783 4 100 5.27E-36 T 29-03-2018 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 SUPERFAMILY SSF56731 116 428 1.74E-115 T 29-03-2018 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 SMART SM00766 450 575 8.0E-46 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Gene3D G3DSA:3.90.980.10 109 240 4.6E-46 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Pfam PF01807 CHC2 zinc finger 7 100 3.3E-41 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 7.6E-152 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 573 2.9E-30 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Gene3D G3DSA:3.40.1360.10 241 367 2.1E-32 T 29-03-2018 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 3.6E-12 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 SUPERFAMILY SSF117023 447 578 3.66E-42 T 29-03-2018 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 PIRSF PIRSF002811 2 580 4.1E-146 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 SMART SM00493 259 330 1.6E-20 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS16645 62447f213c1e774954aef45936a39296 581 Gene3D G3DSA:1.20.50.20 368 417 4.1E-21 T 29-03-2018 CKQ55_RS13255 6275a8b6d79e62d0fd7a073345fcd054 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 2.0E-58 T 29-03-2018 IPR009587 Protein of unknown function DUF1198 CKQ55_RS13255 6275a8b6d79e62d0fd7a073345fcd054 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 8.1E-66 T 29-03-2018 IPR009587 Protein of unknown function DUF1198 CKQ55_RS07970 acb2e5742f9c57682e1089c5b0aa0011 423 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 240 409 3.2E-39 T 29-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain CKQ55_RS07970 acb2e5742f9c57682e1089c5b0aa0011 423 Pfam PF07005 Putative sugar-binding N-terminal domain 3 225 2.2E-61 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CKQ55_RS07970 acb2e5742f9c57682e1089c5b0aa0011 423 SUPERFAMILY SSF142764 4 416 6.67E-100 T 29-03-2018 CKQ55_RS07970 acb2e5742f9c57682e1089c5b0aa0011 423 Gene3D G3DSA:3.40.50.10840 3 232 1.2E-66 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 Pfam PF00206 Lyase 10 297 1.6E-52 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 362 439 1.1E-14 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 2.5E-10 T 29-03-2018 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 2.5E-10 T 29-03-2018 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 2.5E-10 T 29-03-2018 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00145 Argininosuccinate lyase family signature 228 252 2.5E-10 T 29-03-2018 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00149 Fumarate lyase superfamily signature 228 255 7.4E-21 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 7.4E-21 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 7.4E-21 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 7.4E-21 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 SUPERFAMILY SSF48557 11 446 3.14E-107 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 SMART SM00998 361 440 8.5E-19 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 Gene3D G3DSA:1.10.40.30 373 440 2.9E-19 T 29-03-2018 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 6 345 4.1E-122 T 29-03-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 Gene3D G3DSA:1.20.200.10 103 372 3.2E-75 T 29-03-2018 CKQ55_RS25985 2907df77ab545debbfc272d5fe306568 450 Gene3D G3DSA:1.10.275.10 1 102 4.8E-16 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 Gene3D G3DSA:1.10.1660.10 1 57 1.6E-23 T 29-03-2018 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.2E-64 T 29-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 SMART SM00422 2 71 5.0E-32 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 1.1E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 Gene3D G3DSA:1.10.1660.10 58 140 4.9E-25 T 29-03-2018 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 SUPERFAMILY SSF46955 2 121 4.4E-35 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.1E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.1E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.1E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS15455 bca473c8d79e3bb8791d90e2de596fde 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS08055 dcb894e59737e6c79a3a77d8fd28243b 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.5E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS08055 dcb894e59737e6c79a3a77d8fd28243b 143 SUPERFAMILY SSF54523 7 114 1.62E-24 T 29-03-2018 CKQ55_RS08055 dcb894e59737e6c79a3a77d8fd28243b 143 Gene3D G3DSA:3.30.700.10 7 139 6.2E-27 T 29-03-2018 CKQ55_RS08055 dcb894e59737e6c79a3a77d8fd28243b 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.7E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS08055 dcb894e59737e6c79a3a77d8fd28243b 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS08055 dcb894e59737e6c79a3a77d8fd28243b 143 Pfam PF00114 Pilin (bacterial filament) 36 122 1.1E-5 T 29-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CKQ55_RS11940 142ed84c579c623e38acfb4839610b7f 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS11940 142ed84c579c623e38acfb4839610b7f 461 PIRSF PIRSF006060 1 457 3.3E-63 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS11940 142ed84c579c623e38acfb4839610b7f 461 Pfam PF00324 Amino acid permease 16 444 6.4E-102 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 5.6E-46 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 444 5.2E-180 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Gene3D G3DSA:3.30.70.20 326 383 0.011 T 29-03-2018 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Pfam PF10531 SLBB domain 296 344 1.3E-11 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Pfam PF13237 4Fe-4S dicluster domain 374 427 7.4E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 SUPERFAMILY SSF46548 336 444 1.5E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Gene3D G3DSA:3.30.70.20 384 485 1.5E-16 T 29-03-2018 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 728 260.693 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 SUPERFAMILY SSF142019 94 303 1.02E-60 T 29-03-2018 CKQ55_RS25735 9152402bde264d5b2539a5fde1617208 728 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 2.9E-32 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 SMART SM00859 3 122 1.3E-25 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 2.8E-156 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 Gene3D G3DSA:3.30.360.10 145 351 6.2E-48 T 29-03-2018 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 PIRSF PIRSF000148 1 372 6.8E-64 T 29-03-2018 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 SUPERFAMILY SSF51735 1 147 4.23E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 SUPERFAMILY SSF55347 134 356 9.52E-59 T 29-03-2018 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 355 2.3E-41 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.9E-23 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS28510 176d7747e19e24fe598cb76e5505954d 372 Gene3D G3DSA:3.40.50.720 1 144 1.3E-20 T 29-03-2018 CKQ55_RS04045 79772f2bbf078428f70e2dfdc905a9ff 354 SUPERFAMILY SSF52540 123 324 4.36E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04045 79772f2bbf078428f70e2dfdc905a9ff 354 Pfam PF02562 PhoH-like protein 124 327 1.9E-95 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CKQ55_RS04045 79772f2bbf078428f70e2dfdc905a9ff 354 Gene3D G3DSA:3.40.50.300 120 327 2.0E-28 T 29-03-2018 CKQ55_RS09895 58586455a8a8081fa3f51b7a2087f9b5 337 SMART SM00507 199 261 2.6E-6 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS09895 58586455a8a8081fa3f51b7a2087f9b5 337 Gene3D G3DSA:3.40.1800.10 190 277 2.1E-12 T 29-03-2018 CKQ55_RS09895 58586455a8a8081fa3f51b7a2087f9b5 337 Pfam PF13395 HNH endonuclease 212 266 8.6E-14 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS08815 5a7bad543de7ffc5164a54741e330af6 203 SMART SM00749 62 125 4.3E-9 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CKQ55_RS08815 5a7bad543de7ffc5164a54741e330af6 203 SMART SM00749 141 202 5.9E-8 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CKQ55_RS08815 5a7bad543de7ffc5164a54741e330af6 203 Pfam PF04972 BON domain 137 203 4.9E-19 T 29-03-2018 IPR007055 BON domain CKQ55_RS08815 5a7bad543de7ffc5164a54741e330af6 203 Pfam PF04972 BON domain 57 124 5.4E-19 T 29-03-2018 IPR007055 BON domain CKQ55_RS20565 b083f1cfdfba07e9427444ffaba2e758 149 Pfam PF11143 Protein of unknown function (DUF2919) 8 145 3.2E-47 T 29-03-2018 IPR021318 Protein of unknown function DUF2919 CKQ55_RS20000 4e04db5cc14717a292af6c6d277d3218 181 Pfam PF14437 MafB19-like deaminase 20 166 7.7E-33 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CKQ55_RS20000 4e04db5cc14717a292af6c6d277d3218 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 107 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CKQ55_RS20000 4e04db5cc14717a292af6c6d277d3218 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 25 166 48.108 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CKQ55_RS20000 4e04db5cc14717a292af6c6d277d3218 181 SUPERFAMILY SSF53927 20 170 2.84E-57 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CKQ55_RS20000 4e04db5cc14717a292af6c6d277d3218 181 Gene3D G3DSA:3.40.140.10 13 174 1.1E-51 T 29-03-2018 CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 Gene3D G3DSA:3.20.20.120 137 358 1.2E-61 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 SUPERFAMILY SSF51604 119 365 1.97E-69 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 Pfam PF13378 Enolase C-terminal domain-like 153 360 2.4E-60 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 196 227 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 SMART SM00922 150 246 1.6E-25 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 SUPERFAMILY SSF54826 9 135 1.5E-23 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 12 131 1.5E-13 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS09490 11ce3e6ebb6a4a30d00db2d514509807 367 Gene3D G3DSA:3.30.390.10 6 136 3.0E-28 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS19560 aa297ad000d1f2ff1b299c972abf02ff 242 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 188 1.8E-46 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS19560 aa297ad000d1f2ff1b299c972abf02ff 242 Gene3D G3DSA:3.40.225.10 1 242 3.8E-74 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS19560 aa297ad000d1f2ff1b299c972abf02ff 242 SUPERFAMILY SSF53639 4 196 1.94E-59 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS19560 aa297ad000d1f2ff1b299c972abf02ff 242 SMART SM01007 9 189 1.1E-60 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 Pfam PF08544 GHMP kinases C terminal 218 261 9.7E-6 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 282 2.8E-112 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.04 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 SUPERFAMILY SSF54211 1 162 5.31E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 SUPERFAMILY SSF55060 165 280 6.04E-35 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 PIRSF PIRSF010376 1 283 2.1E-84 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 Gene3D G3DSA:3.30.70.890 165 283 7.2E-25 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 Gene3D G3DSA:3.30.230.10 3 164 1.0E-45 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS24410 d2a704910fb38a26806a9a5d83ebcd1e 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 9.8E-11 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 7.2E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 SUPERFAMILY SSF55874 289 453 1.31E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 3.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 3.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 3.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 Gene3D G3DSA:1.10.287.130 228 296 4.2E-14 T 29-03-2018 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 SMART SM00388 238 300 4.5E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 SMART SM00387 345 455 5.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 150 1.0E-10 T 29-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 SUPERFAMILY SSF47384 224 299 1.71E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 8.9E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 Gene3D G3DSA:3.30.565.10 303 457 3.2E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 SMART SM00304 184 237 1.6E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS12335 f16eafc942a48652deabc166fa97f28f 457 Pfam PF00672 HAMP domain 184 234 1.1E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS14565 ec4dcd3892f70f4e89f686f0c8c2cd07 167 Pfam PF05870 Phenolic acid decarboxylase (PAD) 9 165 1.5E-85 T 29-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 CKQ55_RS14565 ec4dcd3892f70f4e89f686f0c8c2cd07 167 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 9 153 3.0E-68 T 29-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 CKQ55_RS14565 ec4dcd3892f70f4e89f686f0c8c2cd07 167 SUPERFAMILY SSF50814 3 166 3.7E-72 T 29-03-2018 IPR012674 Calycin CKQ55_RS14565 ec4dcd3892f70f4e89f686f0c8c2cd07 167 PIRSF PIRSF011561 2 166 3.6E-79 T 29-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 CKQ55_RS14565 ec4dcd3892f70f4e89f686f0c8c2cd07 167 Gene3D G3DSA:2.40.128.20 10 162 1.1E-59 T 29-03-2018 IPR012674 Calycin CKQ55_RS24745 067b8cf2c619e5c2aedd917e503f95eb 290 PIRSF PIRSF006221 1 288 5.1E-92 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CKQ55_RS24745 067b8cf2c619e5c2aedd917e503f95eb 290 Gene3D G3DSA:3.30.200.20 1 92 1.2E-20 T 29-03-2018 CKQ55_RS24745 067b8cf2c619e5c2aedd917e503f95eb 290 Pfam PF03881 Fructosamine kinase 1 284 7.3E-115 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CKQ55_RS24745 067b8cf2c619e5c2aedd917e503f95eb 290 SUPERFAMILY SSF56112 23 281 4.76E-41 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS24745 067b8cf2c619e5c2aedd917e503f95eb 290 Gene3D G3DSA:3.90.1200.10 95 282 1.2E-16 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 SUPERFAMILY SSF52317 1 186 2.38E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.2E-37 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 3.2E-37 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.2E-37 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.2E-37 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.2E-37 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.2E-37 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 3.0E-87 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.0E-5 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.0E-5 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 Gene3D G3DSA:3.40.50.880 1 187 1.3E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.4E-14 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.4E-14 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 5.4E-14 T 29-03-2018 CKQ55_RS15140 94561bbb60e869d07fb265e177616751 187 Pfam PF00117 Glutamine amidotransferase class-I 3 185 1.9E-53 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS11175 2361ca2b4ef480aa862c70b04541fab6 165 Pfam PF04345 Chorismate lyase 24 165 1.8E-29 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CKQ55_RS11175 2361ca2b4ef480aa862c70b04541fab6 165 SUPERFAMILY SSF64288 8 165 2.41E-45 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS11175 2361ca2b4ef480aa862c70b04541fab6 165 Gene3D G3DSA:3.40.1410.10 2 165 1.7E-43 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS11175 2361ca2b4ef480aa862c70b04541fab6 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.329 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.8E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 Pfam PF03466 LysR substrate binding domain 94 301 2.3E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 Gene3D G3DSA:1.10.10.10 3 89 5.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 Gene3D G3DSA:3.40.190.10 180 268 6.4E-27 T 29-03-2018 CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 SUPERFAMILY SSF46785 7 117 6.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 SUPERFAMILY SSF53850 94 305 2.33E-39 T 29-03-2018 CKQ55_RS27510 ed69bf06b1305e8a2049f97d34f91a0b 310 Gene3D G3DSA:3.40.190.10 94 179 9.8E-11 T 29-03-2018 CKQ55_RS23820 b0d2bdc9652c6a498afcff2bb24562b0 172 Pfam PF05229 Spore Coat Protein U domain 23 169 1.1E-35 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS23820 b0d2bdc9652c6a498afcff2bb24562b0 172 Gene3D G3DSA:2.60.40.1090 36 172 7.2E-6 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23820 b0d2bdc9652c6a498afcff2bb24562b0 172 SMART SM00972 111 169 1.1E-19 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS23820 b0d2bdc9652c6a498afcff2bb24562b0 172 SUPERFAMILY SSF49401 33 172 6.96E-5 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.9E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.9E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.9E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 SMART SM00344 7 115 1.0E-22 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 SUPERFAMILY SSF54909 70 149 5.23E-12 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 SUPERFAMILY SSF46785 6 61 7.29E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 8.8E-16 T 29-03-2018 CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 Gene3D G3DSA:3.30.70.920 68 149 7.6E-12 T 29-03-2018 CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 Gene3D G3DSA:1.10.10.10 8 59 1.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22470 7a354df2cf6dafbac2ede0cfebe931cc 151 Pfam PF01037 Lrp/AsnC ligand binding domain 81 131 9.3E-12 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 Gene3D G3DSA:3.40.50.1100 37 148 1.8E-31 T 29-03-2018 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 SUPERFAMILY SSF55021 336 423 7.32E-28 T 29-03-2018 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 Gene3D G3DSA:3.40.50.1100 149 330 5.1E-46 T 29-03-2018 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 SUPERFAMILY SSF53686 15 365 1.57E-101 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 4.2E-78 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 1.6E-267 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 Gene3D G3DSA:3.40.1020.10 338 513 1.1E-70 T 29-03-2018 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 1.6E-27 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 6.4E-29 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CKQ55_RS12075 0605c7e253f430810b1ae73de17016b7 514 SUPERFAMILY SSF55021 420 512 1.42E-25 T 29-03-2018 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 2.2E-38 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 Pfam PF02378 Phosphotransferase system, EIIC 232 495 9.3E-16 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 194 3.3E-18 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 Gene3D G3DSA:3.40.50.2300 105 202 1.9E-36 T 29-03-2018 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 Gene3D G3DSA:3.40.50.2300 2 84 0.025 T 29-03-2018 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 214 551 1.4E-147 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 SUPERFAMILY SSF52794 105 206 1.62E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS21705 630deef2a178f0bc687472a7ecc6ebae 562 SUPERFAMILY SSF52794 4 88 6.02E-9 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS04700 b8a6f70347516d9069c8e4ea684689a1 554 Gene3D G3DSA:3.40.190.10 172 320 4.0E-31 T 29-03-2018 CKQ55_RS04700 b8a6f70347516d9069c8e4ea684689a1 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 480 1.1E-67 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS04700 b8a6f70347516d9069c8e4ea684689a1 554 SUPERFAMILY SSF53850 30 552 1.19E-97 T 29-03-2018 CKQ55_RS04700 b8a6f70347516d9069c8e4ea684689a1 554 PIRSF PIRSF002741 62 545 2.0E-56 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS04700 b8a6f70347516d9069c8e4ea684689a1 554 Gene3D G3DSA:3.90.76.10 62 171 1.9E-24 T 29-03-2018 CKQ55_RS04700 b8a6f70347516d9069c8e4ea684689a1 554 Gene3D G3DSA:3.10.105.10 321 525 1.7E-31 T 29-03-2018 CKQ55_RS02950 2b48492e9d51a8c72bd5b82ed6d9419d 428 Pfam PF00589 Phage integrase family 202 391 2.6E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS02950 2b48492e9d51a8c72bd5b82ed6d9419d 428 Gene3D G3DSA:1.10.150.130 75 200 5.0E-13 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS02950 2b48492e9d51a8c72bd5b82ed6d9419d 428 Gene3D G3DSA:1.10.443.10 201 411 1.7E-32 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS02950 2b48492e9d51a8c72bd5b82ed6d9419d 428 Pfam PF12167 Arm DNA-binding domain 4 68 1.2E-21 T 29-03-2018 IPR022000 Min27-like integrase, DNA-binding domain CKQ55_RS02950 2b48492e9d51a8c72bd5b82ed6d9419d 428 SUPERFAMILY SSF56349 81 401 3.14E-50 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 Gene3D G3DSA:1.10.530.10 16 249 9.1E-34 T 29-03-2018 CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 Gene3D G3DSA:3.10.350.10 402 448 2.2E-15 T 29-03-2018 CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 SMART SM00257 404 446 4.7E-12 T 29-03-2018 IPR018392 LysM domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 SMART SM00257 345 388 5.1E-14 T 29-03-2018 IPR018392 LysM domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 SUPERFAMILY SSF54106 403 446 4.97E-10 T 29-03-2018 IPR018392 LysM domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 SUPERFAMILY SSF54106 344 387 1.96E-10 T 29-03-2018 IPR018392 LysM domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 Pfam PF01476 LysM domain 405 445 1.7E-10 T 29-03-2018 IPR018392 LysM domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 Pfam PF01476 LysM domain 346 387 6.5E-13 T 29-03-2018 IPR018392 LysM domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 SUPERFAMILY SSF53955 102 252 2.73E-41 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 Pfam PF01464 Transglycosylase SLT domain 105 217 1.0E-28 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS07380 712776ea83ff36a1677caac76e3fa8ca 455 Gene3D G3DSA:3.10.350.10 336 401 7.4E-14 T 29-03-2018 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 SUPERFAMILY SSF52151 190 307 2.09E-81 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 SUPERFAMILY SSF52151 4 122 2.09E-81 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 Gene3D G3DSA:3.40.366.10 1 183 4.4E-52 T 29-03-2018 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 2.8E-132 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 4.9E-40 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 PIRSF PIRSF000446 1 309 5.0E-142 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 SUPERFAMILY SSF55048 128 197 1.57E-17 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 Gene3D G3DSA:3.40.366.10 184 309 4.1E-30 T 29-03-2018 CKQ55_RS00780 37912b5a366ff9a104d6f45605b2f796 309 Pfam PF00698 Acyl transferase domain 6 281 8.5E-39 T 29-03-2018 IPR014043 Acyl transferase CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 SUPERFAMILY SSF100950 67 227 2.34E-26 T 29-03-2018 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 Gene3D G3DSA:1.10.10.10 1 55 1.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 Gene3D G3DSA:3.40.50.1360 59 221 1.7E-30 T 29-03-2018 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 SUPERFAMILY SSF46785 2 58 2.02E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 Pfam PF00455 DeoR C terminal sensor domain 71 225 1.9E-42 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 4.6E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 8.8E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 8.8E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 SMART SM01134 67 227 8.4E-57 T 29-03-2018 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 SMART SM00420 4 56 3.1E-20 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS29395 367d1945dfffc34fb7c5585b0bacb7a7 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 425 707 1.5E-104 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Gene3D G3DSA:3.30.450.40 1 173 4.7E-29 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 SMART SM00065 17 164 1.2E-27 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 SUPERFAMILY SSF55781 2 159 1.05E-29 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Gene3D G3DSA:1.10.274.10 195 306 8.0E-28 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 730 4.1E-126 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 SUPERFAMILY SSF52009 293 412 6.41E-25 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Gene3D G3DSA:3.20.20.60 421 739 5.6E-86 T 29-03-2018 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.2E-24 T 29-03-2018 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.2E-24 T 29-03-2018 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.2E-24 T 29-03-2018 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.2E-24 T 29-03-2018 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Pfam PF01590 GAF domain 18 151 1.4E-15 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 SUPERFAMILY SSF47831 198 309 1.83E-25 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.2E-15 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Gene3D G3DSA:3.50.30.10 307 420 2.1E-19 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 SUPERFAMILY SSF51621 424 714 1.31E-94 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS18095 fa356eba2f93fc76a90c2de88393be5b 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 5.5E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS03855 be4151d77073fa10d3fe17f738af1815 299 Pfam PF01261 Xylose isomerase-like TIM barrel 23 233 1.7E-25 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS03855 be4151d77073fa10d3fe17f738af1815 299 SUPERFAMILY SSF51658 4 282 1.96E-46 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS03855 be4151d77073fa10d3fe17f738af1815 299 Gene3D G3DSA:3.20.20.150 2 283 6.0E-41 T 29-03-2018 CKQ55_RS03855 be4151d77073fa10d3fe17f738af1815 299 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 3 281 1.7E-112 T 29-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CKQ55_RS24295 bae87ad1c0a44267ce94fe21322b153f 490 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 435 3.8E-98 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS24295 bae87ad1c0a44267ce94fe21322b153f 490 Pfam PF00860 Permease family 26 405 1.3E-88 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS24295 bae87ad1c0a44267ce94fe21322b153f 490 TIGRFAM TIGR03173 pbuX: xanthine permease 30 438 2.5E-138 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CKQ55_RS22500 ae13d8402617cf8ee3ab569464642dfe 281 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 58 2.7E-6 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS22500 ae13d8402617cf8ee3ab569464642dfe 281 Gene3D G3DSA:1.10.3720.10 7 271 1.3E-38 T 29-03-2018 CKQ55_RS22500 ae13d8402617cf8ee3ab569464642dfe 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 280 6.1E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22500 ae13d8402617cf8ee3ab569464642dfe 281 SUPERFAMILY SSF161098 76 263 2.88E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08570 3bd3e7ae497d701ea36f2e77b64d2554 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 23.579 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CKQ55_RS08570 3bd3e7ae497d701ea36f2e77b64d2554 391 Pfam PF06965 Na+/H+ antiporter 1 6 380 6.0E-149 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CKQ55_RS08570 3bd3e7ae497d701ea36f2e77b64d2554 391 Gene3D G3DSA:1.20.1530.10 2 386 1.4E-152 T 29-03-2018 IPR023171 Na/H antiporter domain CKQ55_RS08570 3bd3e7ae497d701ea36f2e77b64d2554 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 1.3E-182 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 Gene3D G3DSA:3.30.160.20 209 292 2.9E-32 T 29-03-2018 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 SUPERFAMILY SSF75620 12 353 9.42E-136 T 29-03-2018 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.038 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 SMART SM00937 63 178 9.0E-72 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 Pfam PF00472 RF-1 domain 216 321 2.2E-40 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 1.6E-174 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 Pfam PF03462 PCRF domain 14 203 7.0E-76 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CKQ55_RS24425 744c1dd0b629c64ec06d249c5e04f041 360 Gene3D G3DSA:1.20.58.410 3 100 5.3E-19 T 29-03-2018 CKQ55_RS09650 d7eaef47037cd9d1a11201b2778341fe 853 Pfam PF13954 PapC N-terminal domain 54 198 7.6E-45 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS09650 d7eaef47037cd9d1a11201b2778341fe 853 Pfam PF13953 PapC C-terminal domain 775 836 5.7E-21 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS09650 d7eaef47037cd9d1a11201b2778341fe 853 Pfam PF00577 Outer membrane usher protein 216 764 3.6E-173 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS09650 d7eaef47037cd9d1a11201b2778341fe 853 SUPERFAMILY SSF141729 75 189 2.22E-32 T 29-03-2018 CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 SUPERFAMILY SSF46689 6 73 3.58E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 ProSitePatterns PS00356 LacI-type HTH domain signature. 33 51 - T 29-03-2018 CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 Gene3D G3DSA:1.10.10.10 4 69 1.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 Pfam PF01380 SIS domain 108 224 3.6E-13 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 71 7.8E-15 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 Gene3D G3DSA:3.40.50.10490 70 242 5.2E-27 T 29-03-2018 CKQ55_RS17385 d44d8601d40cd67083589d3341be2111 242 SUPERFAMILY SSF53697 86 230 3.01E-30 T 29-03-2018 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 6.4E-109 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 Gene3D G3DSA:3.40.50.10490 5 241 3.6E-96 T 29-03-2018 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 Pfam PF00318 Ribosomal protein S2 9 224 5.1E-94 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 SUPERFAMILY SSF52313 6 235 3.53E-96 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.35 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS07615 196e70920333d3780b54745b1a250c96 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 Gene3D G3DSA:1.20.1250.20 8 209 4.4E-24 T 29-03-2018 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 Pfam PF00854 POT family 89 446 1.2E-88 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.392 T 29-03-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 SUPERFAMILY SSF103473 16 212 2.62E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 SUPERFAMILY SSF103473 258 488 2.62E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 Gene3D G3DSA:1.20.1250.20 264 496 9.5E-15 T 29-03-2018 CKQ55_RS25710 6f3bb671ff5aa01d02820630780b16c9 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 8.6E-139 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 PIRSF PIRSF005261 1 285 1.6E-70 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 Pfam PF01430 Hsp33 protein 5 272 7.7E-85 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 33.612 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 Gene3D G3DSA:3.90.1280.10 226 281 5.8E-24 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 SUPERFAMILY SSF118352 225 283 2.09E-19 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 SUPERFAMILY SSF64397 4 232 1.44E-75 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 Gene3D G3DSA:1.10.287.480 181 225 1.0E-19 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CKQ55_RS15000 228e1ac6fd57dfe02fc6697bce4434cd 292 Gene3D G3DSA:3.55.30.10 1 176 1.4E-61 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 Pfam PF00232 Glycosyl hydrolase family 1 2 459 1.2E-154 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 SUPERFAMILY SSF51445 2 455 7.23E-161 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 2.4E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 2.4E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 2.4E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 2.4E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 2.4E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 Gene3D G3DSA:3.20.20.80 1 464 3.0E-150 T 29-03-2018 CKQ55_RS21870 3cfba43814aa36341da900fdf1fb5ba5 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CKQ55_RS18365 f14fa80c91335458c2199dd08d3382fe 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 85 1.0E-37 T 29-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CKQ55_RS18365 f14fa80c91335458c2199dd08d3382fe 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 44.769 T 29-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CKQ55_RS18365 f14fa80c91335458c2199dd08d3382fe 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 2.5E-28 T 29-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 Gene3D G3DSA:3.50.50.60 2 382 2.1E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 SUPERFAMILY SSF54373 179 277 1.06E-15 T 29-03-2018 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 2.8E-18 T 29-03-2018 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.8E-18 T 29-03-2018 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.8E-18 T 29-03-2018 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 2.8E-18 T 29-03-2018 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 2.8E-18 T 29-03-2018 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 SUPERFAMILY SSF51905 5 175 1.59E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 SUPERFAMILY SSF51905 272 360 1.59E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21845 4bfa33aed23116bc82f067f3c2b6fb18 397 Pfam PF01494 FAD binding domain 7 346 1.2E-30 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 SMART SM00345 7 66 7.9E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 Gene3D G3DSA:3.90.1150.10 354 444 3.5E-15 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.8E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 SUPERFAMILY SSF53383 86 439 5.96E-77 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 SUPERFAMILY SSF46785 2 69 8.17E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 Pfam PF00155 Aminotransferase class I and II 126 410 1.0E-21 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 Gene3D G3DSA:1.10.10.10 1 68 8.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19395 4d9cb5666228170161e3f42c7c74ece5 447 Gene3D G3DSA:3.40.640.10 113 353 7.1E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS17090 4f68a7d6a45fd2baba39c5ead9a5c73b 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 3.0E-41 T 29-03-2018 IPR007416 Protein of unknown function DUF469 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 Gene3D G3DSA:1.20.140.10 220 399 2.8E-13 T 29-03-2018 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 95 1.9E-4 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 SUPERFAMILY SSF56645 7 218 1.44E-42 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 Gene3D G3DSA:2.40.110.10 120 219 2.7E-16 T 29-03-2018 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 374 3.7E-7 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 210 1.9E-8 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 Gene3D G3DSA:1.10.540.10 4 119 1.8E-13 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 PIRSF PIRSF016578 128 392 1.7E-18 T 29-03-2018 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 PIRSF PIRSF016578 2 82 9.8E-9 T 29-03-2018 CKQ55_RS29230 a00d34d1b318faee8400853bc408a359 407 SUPERFAMILY SSF47203 232 375 1.87E-7 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 7.0E-58 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.369 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 2.1E-25 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 Gene3D G3DSA:3.90.470.20 1 126 7.2E-38 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 SUPERFAMILY SSF56214 3 125 6.8E-30 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 87 2.0E-30 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CKQ55_RS19980 004549e1638986cf7793d40e27687799 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 9.9E-39 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CKQ55_RS10185 834f1cf24977b5e6bfbf63b368e929a1 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 8.3E-123 T 29-03-2018 IPR020042 Protein of unknown function DUF4311 CKQ55_RS10185 834f1cf24977b5e6bfbf63b368e929a1 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 1.9E-157 T 29-03-2018 IPR020042 Protein of unknown function DUF4311 CKQ55_RS26860 99a18d6f817c2eb911017481c1478504 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 8.9E-5 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS26860 99a18d6f817c2eb911017481c1478504 130 Gene3D G3DSA:3.10.180.10 1 130 3.5E-17 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS26860 99a18d6f817c2eb911017481c1478504 130 SUPERFAMILY SSF54593 2 127 1.14E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 51 116 2.8E-16 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 288 304 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 305 324 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 409 422 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 9.3E-85 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Pfam PF00689 Cation transporting ATPase, C-terminus 726 892 5.5E-15 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Gene3D G3DSA:1.20.1110.10 563 897 1.8E-57 T 29-03-2018 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SUPERFAMILY SSF81665 276 369 2.09E-103 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SUPERFAMILY SSF81665 48 159 2.09E-103 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SUPERFAMILY SSF81665 692 900 2.09E-103 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SMART SM00831 48 121 3.2E-11 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 377 383 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SUPERFAMILY SSF56784 536 687 2.51E-37 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SUPERFAMILY SSF81660 344 547 7.41E-41 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Pfam PF00122 E1-E2 ATPase 161 355 5.1E-45 T 29-03-2018 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 39 902 0.0 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 371 657 4.9E-19 T 29-03-2018 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Gene3D G3DSA:3.40.1110.10 332 550 6.7E-40 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 SUPERFAMILY SSF81653 172 274 1.31E-27 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 273 411 2.7E-21 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 732 3.1E-31 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS10080 08576a125fb5523b1bc9fc01d0e67809 902 Gene3D G3DSA:2.70.150.10 58 276 8.8E-42 T 29-03-2018 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.129 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.7E-43 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.8E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.1E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.1E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.1E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 SUPERFAMILY SSF110324 2 82 2.06E-34 T 29-03-2018 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16000 5c04fe49375f214615261c0f0a7d4010 85 Gene3D G3DSA:2.40.50.100 20 84 7.9E-31 T 29-03-2018 CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 29-03-2018 IPR020845 AMP-binding, conserved site CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 Gene3D G3DSA:3.40.50.980 15 178 1.6E-29 T 29-03-2018 CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 Pfam PF00501 AMP-binding enzyme 21 422 1.2E-81 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 SUPERFAMILY SSF56801 10 518 5.76E-129 T 29-03-2018 CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 1.4E-13 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 Gene3D G3DSA:3.40.50.980 179 332 4.8E-35 T 29-03-2018 CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 Gene3D G3DSA:2.30.38.10 333 415 1.4E-20 T 29-03-2018 CKQ55_RS27100 4765371c85349b19b66ccd07a1f3a0ab 525 Gene3D G3DSA:3.30.300.30 416 515 4.2E-22 T 29-03-2018 CKQ55_RS23640 f000fa40f263a86b8ca109d691da732f 247 PIRSF PIRSF006325 1 243 1.8E-130 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CKQ55_RS23640 f000fa40f263a86b8ca109d691da732f 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.525 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CKQ55_RS23640 f000fa40f263a86b8ca109d691da732f 247 SUPERFAMILY SSF53335 20 242 1.29E-39 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS23640 f000fa40f263a86b8ca109d691da732f 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 9.2E-131 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CKQ55_RS23640 f000fa40f263a86b8ca109d691da732f 247 Gene3D G3DSA:3.40.50.150 18 247 1.2E-40 T 29-03-2018 CKQ55_RS23640 f000fa40f263a86b8ca109d691da732f 247 Pfam PF13649 Methyltransferase domain 60 158 6.8E-13 T 29-03-2018 CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 SUPERFAMILY SSF51445 372 403 1.91E-73 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 SUPERFAMILY SSF51445 19 276 1.91E-73 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 Pfam PF00704 Glycosyl hydrolases family 18 26 400 5.7E-67 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 Gene3D G3DSA:3.10.50.10 289 371 2.6E-50 T 29-03-2018 IPR029070 Chitinase insertion domain CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 ProSitePatterns PS01095 Chitinases family 18 active site. 145 153 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 SMART SM00636 23 400 1.7E-71 T 29-03-2018 IPR011583 Chitinase II GO:0008061 CKQ55_RS29865 64f40d6f1310f8ff67c74e94f1754533 417 Gene3D G3DSA:3.20.20.80 16 288 8.3E-56 T 29-03-2018 CKQ55_RS16915 3868e62778baac1b435ce7990fdd8f5d 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 205 5.6E-35 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CKQ55_RS16915 3868e62778baac1b435ce7990fdd8f5d 243 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 2.8E-96 T 29-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 Gene3D G3DSA:3.40.190.10 87 173 1.9E-15 T 29-03-2018 CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 SUPERFAMILY SSF46785 10 110 1.36E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 63 7.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 Gene3D G3DSA:1.10.10.10 5 83 1.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 SUPERFAMILY SSF53850 88 293 8.87E-43 T 29-03-2018 CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 Gene3D G3DSA:3.40.190.10 174 261 7.6E-28 T 29-03-2018 CKQ55_RS27600 f95f502d5ed1bea57fb5c590e5a314a1 300 Pfam PF03466 LysR substrate binding domain 88 290 2.9E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 SUPERFAMILY SSF55874 4 212 1.11E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 SMART SM00387 27 184 6.6E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 2.8E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PIRSF PIRSF002583 1 624 2.3E-221 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 Pfam PF00183 Hsp90 protein 218 623 3.5E-128 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 SUPERFAMILY SSF110942 510 622 5.75E-35 T 29-03-2018 CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 5.0E-63 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 Gene3D G3DSA:3.30.565.10 29 222 5.5E-53 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 SUPERFAMILY SSF54211 230 485 1.67E-101 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CKQ55_RS05900 a74a9d8b5e25fdb0e4f02a851bc8aaba 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 32.87 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.1E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 1.1E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 1.1E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.1E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.1E-43 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 Gene3D G3DSA:3.20.20.100 1 273 6.9E-92 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 SUPERFAMILY SSF51430 2 262 2.36E-88 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 Pfam PF00248 Aldo/keto reductase family 15 257 1.9E-44 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PIRSF PIRSF000097 1 112 5.9E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS17555 bdfd6396005edb06892ff1733341f782 283 PIRSF PIRSF000097 110 270 6.4E-41 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 SUPERFAMILY SSF51905 454 511 3.13E-64 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 SUPERFAMILY SSF51905 14 295 3.13E-64 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 Pfam PF00732 GMC oxidoreductase 17 303 6.2E-64 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 PIRSF PIRSF000137 1 319 2.4E-69 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 PIRSF PIRSF000137 325 512 7.1E-34 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 Gene3D G3DSA:3.30.560.10 114 470 4.4E-75 T 29-03-2018 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 SUPERFAMILY SSF54373 327 455 2.75E-19 T 29-03-2018 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 262 276 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 91 114 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 Pfam PF05199 GMC oxidoreductase 366 506 2.9E-29 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CKQ55_RS21360 62853ec884aaf73c52ec113d5e1f1c2b 514 Gene3D G3DSA:4.10.450.10 62 113 7.9E-10 T 29-03-2018 CKQ55_RS08635 4eb5f706ea969564d49ae1799557b73a 436 Gene3D G3DSA:1.20.1250.20 14 228 4.0E-26 T 29-03-2018 CKQ55_RS08635 4eb5f706ea969564d49ae1799557b73a 436 Pfam PF07690 Major Facilitator Superfamily 59 382 2.2E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS08635 4eb5f706ea969564d49ae1799557b73a 436 SUPERFAMILY SSF103473 11 418 1.7E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS08635 4eb5f706ea969564d49ae1799557b73a 436 Gene3D G3DSA:1.20.1250.20 235 433 3.2E-17 T 29-03-2018 CKQ55_RS27705 b96d2bc22fefd88e43bc1e75ede9e32b 106 SUPERFAMILY SSF50118 4 105 9.15E-18 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS27705 b96d2bc22fefd88e43bc1e75ede9e32b 106 Pfam PF01845 CcdB protein 4 105 3.0E-28 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS27705 b96d2bc22fefd88e43bc1e75ede9e32b 106 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 20 103 2.0E-5 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS27705 b96d2bc22fefd88e43bc1e75ede9e32b 106 Gene3D G3DSA:2.30.30.110 4 105 8.6E-17 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS17790 e0113fb1c87c7c0cf804d7a9ca5fefff 76 SUPERFAMILY SSF54862 20 74 5.71E-5 T 29-03-2018 CKQ55_RS17790 e0113fb1c87c7c0cf804d7a9ca5fefff 76 Gene3D G3DSA:3.30.70.20 9 76 0.0019 T 29-03-2018 CKQ55_RS17790 e0113fb1c87c7c0cf804d7a9ca5fefff 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 3.2E-28 T 29-03-2018 IPR010693 Divergent 4Fe-4S mono-cluster CKQ55_RS12985 7f29ee7c7cd3fab2683fbbc3a3b78cb8 548 SUPERFAMILY SSF56935 128 548 2.69E-93 T 29-03-2018 CKQ55_RS12985 7f29ee7c7cd3fab2683fbbc3a3b78cb8 548 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 135 543 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS12985 7f29ee7c7cd3fab2683fbbc3a3b78cb8 548 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 56 4.9E-14 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CKQ55_RS12985 7f29ee7c7cd3fab2683fbbc3a3b78cb8 548 Gene3D G3DSA:2.40.170.10 126 548 2.6E-91 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS12985 7f29ee7c7cd3fab2683fbbc3a3b78cb8 548 Pfam PF02264 LamB porin 130 548 2.2E-81 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 Gene3D G3DSA:1.10.10.60 149 203 3.4E-9 T 29-03-2018 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 SUPERFAMILY SSF51182 7 176 1.65E-18 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 SMART SM00342 169 251 8.4E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 SUPERFAMILY SSF46689 206 253 2.33E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 Gene3D G3DSA:1.10.10.60 204 253 1.2E-8 T 29-03-2018 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 8.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 8.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 Pfam PF02311 AraC-like ligand binding domain 21 132 1.6E-9 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 Gene3D G3DSA:2.60.120.10 11 101 1.2E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS19320 f21059deb1d0e5361eacfe00a98ef572 255 Pfam PF12833 Helix-turn-helix domain 176 252 1.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08810 8083567040e2b929838d5937c2f17941 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 7.6E-14 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CKQ55_RS08810 8083567040e2b929838d5937c2f17941 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 18.783 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CKQ55_RS08810 8083567040e2b929838d5937c2f17941 53 PIRSF PIRSF036466 1 53 4.6E-21 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CKQ55_RS14240 24ba9fd3d0e9c7e47ff9565afafb7117 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 5.7E-16 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr CKQ55_RS14235 24ba9fd3d0e9c7e47ff9565afafb7117 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 5.7E-16 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 Gene3D G3DSA:1.10.1660.10 1 55 8.5E-21 T 29-03-2018 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 3.8E-63 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 SMART SM00422 1 70 1.3E-28 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 SUPERFAMILY SSF46955 1 126 1.32E-35 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.5E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 Gene3D G3DSA:1.10.1660.10 56 135 6.8E-15 T 29-03-2018 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS05825 b0ed86232ed187abd78a98768beea904 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 Gene3D G3DSA:1.10.10.10 1 133 2.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 Gene3D G3DSA:3.10.105.10 317 532 5.3E-8 T 29-03-2018 CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 Gene3D G3DSA:3.40.190.10 259 308 1.8E-4 T 29-03-2018 CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 SUPERFAMILY SSF53850 122 561 7.06E-59 T 29-03-2018 CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 6.2E-36 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 303 9.9E-15 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS06155 617bed1ad1851a8eef67a498473c96de 566 Gene3D G3DSA:3.90.76.10 134 258 7.2E-16 T 29-03-2018 CKQ55_RS05910 63d1e8a81eabb6f3280827bda66a02ba 110 SUPERFAMILY SSF82607 12 104 1.24E-35 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CKQ55_RS05910 63d1e8a81eabb6f3280827bda66a02ba 110 Pfam PF02575 YbaB/EbfC DNA-binding family 12 100 1.9E-34 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CKQ55_RS05910 63d1e8a81eabb6f3280827bda66a02ba 110 Gene3D G3DSA:3.30.1310.10 2 110 1.8E-45 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CKQ55_RS05910 63d1e8a81eabb6f3280827bda66a02ba 110 PIRSF PIRSF004555 4 110 1.5E-38 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CKQ55_RS05910 63d1e8a81eabb6f3280827bda66a02ba 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 106 3.0E-41 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CKQ55_RS05910 63d1e8a81eabb6f3280827bda66a02ba 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 99 23.222 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CKQ55_RS07235 24fe2903b3196d4793370d9b8530386c 371 Pfam PF13439 Glycosyltransferase Family 4 18 176 2.7E-16 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CKQ55_RS07235 24fe2903b3196d4793370d9b8530386c 371 Gene3D G3DSA:3.40.50.2000 6 187 4.3E-9 T 29-03-2018 CKQ55_RS07235 24fe2903b3196d4793370d9b8530386c 371 Pfam PF00534 Glycosyl transferases group 1 200 334 3.9E-23 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS07235 24fe2903b3196d4793370d9b8530386c 371 SUPERFAMILY SSF53756 7 368 3.86E-58 T 29-03-2018 CKQ55_RS07235 24fe2903b3196d4793370d9b8530386c 371 Gene3D G3DSA:3.40.50.2000 188 346 1.1E-28 T 29-03-2018 CKQ55_RS31190 102e613673a2a0e19c3de51e7541000b 143 Pfam PF10624 Plasmid conjugative transfer entry exclusion protein TraS 1 139 2.0E-40 T 29-03-2018 IPR018898 Plasmid conjugative transfer entry exclusion protein TraS CKQ55_RS29035 bae57d0281d3088e0bcf9acddd2861e2 239 SUPERFAMILY SSF53681 7 112 1.9E-28 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS29035 bae57d0281d3088e0bcf9acddd2861e2 239 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 227 1.0E-56 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS29035 bae57d0281d3088e0bcf9acddd2861e2 239 Gene3D G3DSA:3.40.50.1860 120 218 2.1E-16 T 29-03-2018 CKQ55_RS29035 bae57d0281d3088e0bcf9acddd2861e2 239 TIGRFAM TIGR00035 asp_race: aspartate racemase 6 236 8.8E-42 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CKQ55_RS29035 bae57d0281d3088e0bcf9acddd2861e2 239 SUPERFAMILY SSF53681 121 230 9.48E-17 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS29035 bae57d0281d3088e0bcf9acddd2861e2 239 Gene3D G3DSA:3.40.50.1860 5 119 1.7E-33 T 29-03-2018 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 Gene3D G3DSA:3.40.50.620 1 190 2.0E-73 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.388 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 9.6E-89 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.5E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.5E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.5E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.5E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 SUPERFAMILY SSF52374 5 330 2.64E-97 T 29-03-2018 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 Gene3D G3DSA:1.10.240.10 191 313 5.9E-32 T 29-03-2018 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 5.4E-116 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS15090 5c956195c3312d0bcbdd30d9e18de6e3 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS01555 e42d053dc0654a0c9861fcf757fe91a0 362 Gene3D G3DSA:3.10.310.10 1 174 3.7E-72 T 29-03-2018 CKQ55_RS01555 e42d053dc0654a0c9861fcf757fe91a0 362 SUPERFAMILY SSF54506 2 166 4.08E-63 T 29-03-2018 CKQ55_RS01555 e42d053dc0654a0c9861fcf757fe91a0 362 SUPERFAMILY SSF54506 170 356 2.55E-59 T 29-03-2018 CKQ55_RS01555 e42d053dc0654a0c9861fcf757fe91a0 362 Gene3D G3DSA:3.10.310.10 175 336 2.1E-54 T 29-03-2018 CKQ55_RS01555 e42d053dc0654a0c9861fcf757fe91a0 362 Pfam PF04303 PrpF protein 1 354 1.6E-132 T 29-03-2018 IPR007400 PrpF protein CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 Pfam PF03466 LysR substrate binding domain 90 290 1.4E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 Gene3D G3DSA:1.10.10.10 3 84 1.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.8E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 SUPERFAMILY SSF53850 90 293 1.99E-48 T 29-03-2018 CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 Gene3D G3DSA:3.40.190.10 89 175 1.5E-17 T 29-03-2018 CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 Gene3D G3DSA:3.40.190.10 176 263 7.4E-26 T 29-03-2018 CKQ55_RS16980 750f1e24f9e1d3ba387622785112c751 299 SUPERFAMILY SSF46785 3 109 9.72E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25440 efa7e2bebe2450a961f247ae3bcb5c90 212 SUPERFAMILY SSF52777 3 205 6.67E-46 T 29-03-2018 CKQ55_RS25440 efa7e2bebe2450a961f247ae3bcb5c90 212 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 11 195 5.0E-78 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS25440 efa7e2bebe2450a961f247ae3bcb5c90 212 Pfam PF00302 Chloramphenicol acetyltransferase 4 196 2.0E-23 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS25440 efa7e2bebe2450a961f247ae3bcb5c90 212 PIRSF PIRSF000440 1 208 6.4E-55 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS25440 efa7e2bebe2450a961f247ae3bcb5c90 212 Gene3D G3DSA:3.30.559.10 2 207 4.9E-25 T 29-03-2018 CKQ55_RS25440 efa7e2bebe2450a961f247ae3bcb5c90 212 SMART SM01059 2 199 1.6E-66 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 SMART SM00382 28 211 2.3E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 Pfam PF00005 ABC transporter 20 161 1.8E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 Pfam PF08402 TOBE domain 256 330 1.5E-15 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 Gene3D G3DSA:3.40.50.300 1 250 1.4E-68 T 29-03-2018 CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 SUPERFAMILY SSF50331 252 329 1.11E-8 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 SUPERFAMILY SSF52540 4 241 1.36E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28030 a3f0aafd99b119a92a36a21b79ccc95d 336 Gene3D G3DSA:2.40.50.140 258 323 2.3E-6 T 29-03-2018 CKQ55_RS22650 7879a37d7536a1c5e6c360d644b15d75 272 SUPERFAMILY SSF53448 14 237 2.36E-11 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22650 7879a37d7536a1c5e6c360d644b15d75 272 Gene3D G3DSA:3.90.550.10 12 270 5.6E-9 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 SMART SM00382 210 355 2.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 Gene3D G3DSA:3.40.50.10770 25 143 4.1E-10 T 29-03-2018 CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 3 188 7.8E-84 T 29-03-2018 IPR009715 Regulator of RNA terminal phosphate cyclase CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 Gene3D G3DSA:1.10.8.60 366 448 9.9E-14 T 29-03-2018 CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 Gene3D G3DSA:3.40.50.300 186 365 7.8E-23 T 29-03-2018 CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 SUPERFAMILY SSF52540 192 437 5.1E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 Pfam PF00158 Sigma-54 interaction domain 191 357 4.2E-49 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS11285 b97dcc8f9f79e6e6dce8a6c08f7780ae 526 PIRSF PIRSF037354 2 524 2.5E-259 T 29-03-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 5.8E-188 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 Pfam PF00005 ABC transporter 44 192 1.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 SMART SM00382 53 242 7.2E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 SUPERFAMILY SSF54631 276 394 4.03E-12 T 29-03-2018 CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 SUPERFAMILY SSF52540 43 270 1.17E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 Gene3D G3DSA:3.40.50.300 2 274 4.1E-77 T 29-03-2018 CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 Pfam PF00571 CBS domain 347 393 9.9E-6 T 29-03-2018 IPR000644 CBS domain CKQ55_RS19365 d4dc6146dd4862da196f8d66a7c1a079 400 Gene3D G3DSA:3.10.580.10 275 399 1.4E-11 T 29-03-2018 CKQ55_RS12495 27905b8b7c05589d5f2a6954db0ba87f 185 Gene3D G3DSA:2.60.40.1090 36 185 8.7E-37 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12495 27905b8b7c05589d5f2a6954db0ba87f 185 SUPERFAMILY SSF49401 37 184 2.04E-37 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS12495 27905b8b7c05589d5f2a6954db0ba87f 185 Pfam PF00419 Fimbrial protein 39 184 1.1E-19 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS08945 8e7806fe3c0960ec45c5b88a89118db0 353 Gene3D G3DSA:3.40.50.10490 203 340 4.4E-15 T 29-03-2018 CKQ55_RS08945 8e7806fe3c0960ec45c5b88a89118db0 353 Gene3D G3DSA:3.40.50.10490 3 202 1.8E-36 T 29-03-2018 CKQ55_RS08945 8e7806fe3c0960ec45c5b88a89118db0 353 SUPERFAMILY SSF53697 5 342 4.27E-53 T 29-03-2018 CKQ55_RS08945 8e7806fe3c0960ec45c5b88a89118db0 353 Pfam PF01380 SIS domain 39 162 5.7E-15 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 Gene3D G3DSA:3.40.1380.10 42 239 1.7E-74 T 29-03-2018 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 SUPERFAMILY SSF52943 2 287 1.26E-96 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.484 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 Gene3D G3DSA:1.10.287.80 2 41 3.4E-18 T 29-03-2018 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 Gene3D G3DSA:1.10.287.80 240 282 5.3E-14 T 29-03-2018 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 5.5E-113 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 Pfam PF00231 ATP synthase 5 286 1.9E-96 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.6E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.6E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12930 6087366bc3a88959b966d4ef072b3e77 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.6E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS07895 6a743e948f6b796bdd9052251ac924a7 417 Gene3D G3DSA:3.20.20.370 178 414 4.6E-38 T 29-03-2018 CKQ55_RS07895 6a743e948f6b796bdd9052251ac924a7 417 Pfam PF01522 Polysaccharide deacetylase 236 374 4.3E-20 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CKQ55_RS07895 6a743e948f6b796bdd9052251ac924a7 417 SUPERFAMILY SSF88713 199 389 1.39E-30 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 Gene3D G3DSA:2.40.50.140 5 82 2.4E-35 T 29-03-2018 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 29-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 SUPERFAMILY SSF50249 6 82 6.85E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.6E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.6E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.6E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 1.0E-35 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.332 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 6.2E-39 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15360 66a9c4f3303e34b1621e13d37df6cd78 84 Pfam PF00366 Ribosomal protein S17 10 76 2.4E-34 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Gene3D G3DSA:3.50.50.60 403 472 2.2E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 SUPERFAMILY SSF46548 7 157 7.32E-41 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.2E-37 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.2E-37 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.2E-37 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.2E-37 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.2E-37 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Gene3D G3DSA:3.40.50.20 146 242 5.9E-17 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 SUPERFAMILY SSF51971 145 401 1.35E-67 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Gene3D G3DSA:1.10.1060.10 2 145 4.8E-40 T 29-03-2018 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.1E-38 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 459 2.0E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Gene3D G3DSA:3.50.50.60 313 401 3.7E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 Gene3D G3DSA:3.50.50.60 243 312 2.3E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15855 bac67ccf1bc5dd23ae9743922e917656 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 3.3E-265 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CKQ55_RS14250 b07de8989b410a2baab5eac0178e616a 65 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 1.0E-18 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CKQ55_RS14250 b07de8989b410a2baab5eac0178e616a 65 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 60 8.3E-27 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CKQ55_RS14250 b07de8989b410a2baab5eac0178e616a 65 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 62 2.8E-33 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CKQ55_RS31465 041a4928117db2146aad508acc98be96 89 Gene3D G3DSA:1.10.1220.10 5 48 1.9E-15 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS31465 041a4928117db2146aad508acc98be96 89 SUPERFAMILY SSF47598 5 82 2.0E-22 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS31465 041a4928117db2146aad508acc98be96 89 Gene3D G3DSA:1.20.890.30 52 87 2.5E-13 T 29-03-2018 CKQ55_RS31465 041a4928117db2146aad508acc98be96 89 Pfam PF08681 Protein of unknown function (DUF1778) 8 86 2.7E-23 T 29-03-2018 IPR014795 Vibrio phage ICP1, Orf50 CKQ55_RS21650 4bbb525af53c02191c5938eb44656897 601 Gene3D G3DSA:3.40.190.10 205 314 6.9E-18 T 29-03-2018 CKQ55_RS21650 4bbb525af53c02191c5938eb44656897 601 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 503 1.6E-68 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS21650 4bbb525af53c02191c5938eb44656897 601 Gene3D G3DSA:3.10.105.10 315 560 3.7E-47 T 29-03-2018 CKQ55_RS21650 4bbb525af53c02191c5938eb44656897 601 SUPERFAMILY SSF53850 49 589 8.87E-106 T 29-03-2018 CKQ55_RS21650 4bbb525af53c02191c5938eb44656897 601 Gene3D G3DSA:3.90.76.10 63 204 4.2E-23 T 29-03-2018 CKQ55_RS21650 4bbb525af53c02191c5938eb44656897 601 PIRSF PIRSF002741 3 592 9.8E-156 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 SUPERFAMILY SSF56176 204 289 7.36E-24 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 Pfam PF00571 CBS domain 140 189 2.9E-5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 Pfam PF00571 CBS domain 69 124 6.6E-8 T 29-03-2018 IPR000644 CBS domain CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 SUPERFAMILY SSF54631 66 202 4.67E-33 T 29-03-2018 CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 Gene3D G3DSA:3.10.580.10 50 200 9.3E-36 T 29-03-2018 CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 SMART SM01091 205 283 2.3E-31 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 SMART SM00116 78 127 4.2 T 29-03-2018 IPR000644 CBS domain CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 SMART SM00116 141 189 1.1 T 29-03-2018 IPR000644 CBS domain CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 Gene3D G3DSA:3.30.465.10 201 285 2.9E-27 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS04055 419ef2db337572683d86349be5c5dbd1 292 Pfam PF03471 Transporter associated domain 206 281 3.1E-23 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 Pfam PF00239 Resolvase, N terminal domain 3 159 8.8E-30 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 Gene3D G3DSA:3.40.50.1390 2 126 4.9E-33 T 29-03-2018 CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 SMART SM00857 3 159 3.2E-40 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 Gene3D G3DSA:1.20.5.40 127 148 5.6E-5 T 29-03-2018 CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 Gene3D G3DSA:1.10.10.60 149 200 6.5E-6 T 29-03-2018 CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30325 d98f71b9b409391a6df9a0bb285f4d1f 206 SUPERFAMILY SSF53041 1 159 8.24E-32 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS21255 cb32b7bbdb972291910b53de2bdd1af1 207 PIRSF PIRSF020606 1 204 2.5E-75 T 29-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 CKQ55_RS21255 cb32b7bbdb972291910b53de2bdd1af1 207 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 5.6E-55 T 29-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 CKQ55_RS00610 b5531912d3e2386c68a20c3554026089 572 Gene3D G3DSA:3.40.50.10840 129 362 1.8E-55 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CKQ55_RS00610 b5531912d3e2386c68a20c3554026089 572 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 384 558 5.3E-32 T 29-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain CKQ55_RS00610 b5531912d3e2386c68a20c3554026089 572 SUPERFAMILY SSF142764 130 566 3.4E-90 T 29-03-2018 CKQ55_RS00610 b5531912d3e2386c68a20c3554026089 572 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 6 121 1.9E-49 T 29-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS00610 b5531912d3e2386c68a20c3554026089 572 Pfam PF07005 Putative sugar-binding N-terminal domain 130 355 6.5E-57 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CKQ55_RS05045 4ecb293e45dad2b87e640d35c4a88e71 263 SMART SM00382 33 217 3.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS05045 4ecb293e45dad2b87e640d35c4a88e71 263 SUPERFAMILY SSF52540 9 231 7.57E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05045 4ecb293e45dad2b87e640d35c4a88e71 263 Pfam PF00005 ABC transporter 31 168 5.2E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS05045 4ecb293e45dad2b87e640d35c4a88e71 263 Gene3D G3DSA:3.40.50.300 6 245 9.2E-49 T 29-03-2018 CKQ55_RS05045 4ecb293e45dad2b87e640d35c4a88e71 263 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS10745 c0cb529564a221d9a0caf3d24e7dbc84 107 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 107 38.096 T 29-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 CKQ55_RS10745 c0cb529564a221d9a0caf3d24e7dbc84 107 SUPERFAMILY SSF54913 2 106 7.41E-35 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CKQ55_RS10745 c0cb529564a221d9a0caf3d24e7dbc84 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 1.8E-32 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CKQ55_RS10745 c0cb529564a221d9a0caf3d24e7dbc84 107 Gene3D G3DSA:3.30.70.120 1 107 1.2E-35 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CKQ55_RS22515 a70a513a113b040a348c5ef21f0ce2f6 504 SUPERFAMILY SSF53850 24 501 5.02E-130 T 29-03-2018 CKQ55_RS22515 a70a513a113b040a348c5ef21f0ce2f6 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 418 1.9E-92 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS22515 a70a513a113b040a348c5ef21f0ce2f6 504 PIRSF PIRSF002741 9 504 1.3E-111 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS22515 a70a513a113b040a348c5ef21f0ce2f6 504 Gene3D G3DSA:3.90.76.10 52 146 4.7E-28 T 29-03-2018 CKQ55_RS22515 a70a513a113b040a348c5ef21f0ce2f6 504 Gene3D G3DSA:3.10.105.10 283 474 1.1E-46 T 29-03-2018 CKQ55_RS22515 a70a513a113b040a348c5ef21f0ce2f6 504 Gene3D G3DSA:3.40.190.10 147 282 4.0E-40 T 29-03-2018 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 PRINTS PR00189 Transthyretin signature 58 83 4.9E-6 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 PRINTS PR00189 Transthyretin signature 85 114 4.9E-6 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 PRINTS PR00189 Transthyretin signature 26 46 4.9E-6 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 26 136 1.7E-40 T 29-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 Gene3D G3DSA:2.60.40.180 24 136 1.8E-37 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 Pfam PF00576 HIUase/Transthyretin family 27 135 2.3E-33 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS24260 d1ee87f76c07299887496b64730abd72 136 SUPERFAMILY SSF49472 24 136 2.62E-36 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 SUPERFAMILY SSF53041 1 138 9.16E-43 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 Gene3D G3DSA:1.10.10.60 129 181 1.9E-10 T 29-03-2018 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 Gene3D G3DSA:1.20.5.40 108 128 5.4E-13 T 29-03-2018 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 SUPERFAMILY SSF46689 141 181 2.62E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 Pfam PF00239 Resolvase, N terminal domain 3 137 8.0E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 SMART SM00857 3 139 6.3E-51 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 Gene3D G3DSA:3.40.50.1390 1 107 1.1E-36 T 29-03-2018 CKQ55_RS30360 b066c66c45801debda198fcc16f4d9cd 185 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 8.5E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS06525 c36fc340666c4e34ef7af22ec128e2fc 301 SUPERFAMILY SSF53067 3 299 1.15E-61 T 29-03-2018 CKQ55_RS06525 c36fc340666c4e34ef7af22ec128e2fc 301 Gene3D G3DSA:3.30.420.40 1 115 6.5E-23 T 29-03-2018 CKQ55_RS06525 c36fc340666c4e34ef7af22ec128e2fc 301 Pfam PF00480 ROK family 3 299 1.7E-92 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS06525 c36fc340666c4e34ef7af22ec128e2fc 301 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS06525 c36fc340666c4e34ef7af22ec128e2fc 301 Gene3D G3DSA:3.30.420.40 116 300 1.2E-50 T 29-03-2018 CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 4.9E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 Pfam PF07729 FCD domain 96 219 1.4E-18 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 Gene3D G3DSA:1.20.120.530 81 230 7.4E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 Gene3D G3DSA:1.10.10.10 1 74 3.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 SMART SM00345 13 72 7.0E-24 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 SUPERFAMILY SSF48008 94 223 6.8E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 SMART SM00895 96 220 2.0E-15 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 SUPERFAMILY SSF46785 2 76 1.03E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.6E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS16370 d7a617338ff8f879a3b87c26af29f17f 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.6E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 SUPERFAMILY SSF51735 3 166 1.08E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 Gene3D G3DSA:3.30.360.10 160 314 5.7E-84 T 29-03-2018 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.1E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.1E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.1E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-48 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 9.2E-73 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 SMART SM00846 3 150 1.4E-95 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.4E-41 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 Gene3D G3DSA:3.40.50.720 1 159 4.7E-79 T 29-03-2018 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 PIRSF PIRSF000149 1 331 6.0E-137 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 SUPERFAMILY SSF55347 149 312 6.85E-83 T 29-03-2018 CKQ55_RS29890 f1e8dc3192d11017c36b602cba185530 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.7E-135 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS14895 15d1964e3523bbe2e64c4cbd22c44f2c 212 Pfam PF04519 Polymer-forming cytoskeletal 87 183 4.8E-21 T 29-03-2018 IPR007607 Protein of unknown function DUF583 CKQ55_RS06835 303b6605e042d0510c3fd36b3c21b000 165 Gene3D G3DSA:3.40.190.10 1 147 3.2E-16 T 29-03-2018 CKQ55_RS06835 303b6605e042d0510c3fd36b3c21b000 165 SUPERFAMILY SSF53850 2 156 2.23E-20 T 29-03-2018 CKQ55_RS06835 303b6605e042d0510c3fd36b3c21b000 165 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 125 1.2E-33 T 29-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CKQ55_RS06835 303b6605e042d0510c3fd36b3c21b000 165 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 1 142 6.2E-25 T 29-03-2018 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 SUPERFAMILY SSF54211 221 392 6.26E-62 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 2.9E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Gene3D G3DSA:3.30.565.10 17 220 8.8E-75 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 SUPERFAMILY SSF56719 730 795 7.59E-87 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 SUPERFAMILY SSF56719 394 560 7.59E-87 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 SMART SM00433 35 797 8.3E-279 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 SUPERFAMILY SSF55874 4 220 2.88E-76 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 SMART SM00387 31 175 3.7E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 5.3E-30 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 114.772 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Pfam PF00204 DNA gyrase B 221 390 1.3E-59 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Pfam PF01751 Toprim domain 419 531 4.5E-18 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 4.3E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 8.1E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Gene3D G3DSA:3.40.50.670 402 801 2.6E-108 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CKQ55_RS13085 abfc5888ad402cef98ccc5350a296784 804 Gene3D G3DSA:3.30.230.10 221 392 2.4E-66 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS23690 577d2262f75ad00e8bc069613e505049 261 Gene3D G3DSA:1.10.3470.10 1 261 1.1E-25 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS23690 577d2262f75ad00e8bc069613e505049 261 Pfam PF00950 ABC 3 transport family 1 256 5.4E-88 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CKQ55_RS23690 577d2262f75ad00e8bc069613e505049 261 SUPERFAMILY SSF81345 3 257 1.96E-41 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 613 46.587 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Gene3D G3DSA:1.10.10.10 450 500 7.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 SUPERFAMILY SSF88659 453 527 7.48E-21 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Pfam PF04542 Sigma-70 region 2 380 449 1.7E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 SUPERFAMILY SSF88659 510 612 2.03E-25 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Gene3D G3DSA:1.10.10.10 542 613 6.8E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Pfam PF04539 Sigma-70 region 3 459 534 9.4E-29 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 573 599 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 404 417 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 SUPERFAMILY SSF88946 115 447 1.13E-101 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Pfam PF04546 Sigma-70, non-essential region 139 349 1.6E-73 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 601 3.6E-38 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 PRINTS PR00046 Major sigma-70 factor signature 552 564 6.4E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 PRINTS PR00046 Major sigma-70 factor signature 404 417 6.4E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 PRINTS PR00046 Major sigma-70 factor signature 428 436 6.4E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 PRINTS PR00046 Major sigma-70 factor signature 573 588 6.4E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 PRINTS PR00046 Major sigma-70 factor signature 588 599 6.4E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Pfam PF03979 Sigma-70 factor, region 1.1 4 81 3.5E-30 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Pfam PF04545 Sigma-70, region 4 548 601 1.0E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Gene3D G3DSA:1.10.601.10 3 114 2.5E-14 T 29-03-2018 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 Gene3D G3DSA:1.10.601.10 115 449 2.5E-108 T 29-03-2018 CKQ55_RS16640 1739e431cf90351787277e79b19b05bc 614 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 376 612 1.4E-120 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 SMART SM00091 210 278 3.0E-6 T 29-03-2018 IPR000014 PAS domain CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 SUPERFAMILY SSF103190 34 163 1.1E-30 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Gene3D G3DSA:3.30.450.20 203 320 1.0E-8 T 29-03-2018 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 SMART SM00387 418 529 1.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 SUPERFAMILY SSF55785 213 311 3.62E-7 T 29-03-2018 IPR000014 PAS domain CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Gene3D G3DSA:1.10.287.130 321 376 2.5E-15 T 29-03-2018 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Gene3D G3DSA:3.30.450.20 30 165 2.8E-20 T 29-03-2018 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 SUPERFAMILY SSF55890 322 390 2.35E-9 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 3.8E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 SUPERFAMILY SSF55874 393 526 1.44E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Gene3D G3DSA:3.30.565.10 377 539 5.3E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 2.1E-8 T 29-03-2018 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Pfam PF17203 Single cache domain 3 38 159 2.1E-18 T 29-03-2018 IPR033463 Single cache domain 3 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Pfam PF00989 PAS fold 213 261 3.9E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS08345 1da5a74a5a312fb7e58ccad328c09455 541 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 527 3.6E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS25020 1268de626ab9c076de8616c499e64b6c 314 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 306 3.9E-81 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CKQ55_RS25020 1268de626ab9c076de8616c499e64b6c 314 Gene3D G3DSA:3.40.830.10 3 314 6.7E-48 T 29-03-2018 CKQ55_RS25020 1268de626ab9c076de8616c499e64b6c 314 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 1 313 53.996 T 29-03-2018 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 CKQ55_RS25020 1268de626ab9c076de8616c499e64b6c 314 SUPERFAMILY SSF53213 5 185 3.27E-70 T 29-03-2018 CKQ55_RS25020 1268de626ab9c076de8616c499e64b6c 314 SUPERFAMILY SSF53213 230 308 3.27E-70 T 29-03-2018 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 5.8E-190 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 Gene3D G3DSA:3.40.190.10 20 125 2.2E-25 T 29-03-2018 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 29-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 SUPERFAMILY SSF53850 21 326 4.94E-94 T 29-03-2018 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 Gene3D G3DSA:3.40.190.10 126 245 2.1E-28 T 29-03-2018 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 Gene3D G3DSA:3.40.190.10 246 329 5.5E-27 T 29-03-2018 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 29-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CKQ55_RS13595 aefed10be444611b6f4dd6e521964cfa 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 6.2E-47 T 29-03-2018 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 Gene3D G3DSA:3.40.190.10 189 268 1.1E-18 T 29-03-2018 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 SUPERFAMILY SSF46785 2 114 5.13E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 Gene3D G3DSA:3.40.190.10 90 188 1.0E-20 T 29-03-2018 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 Pfam PF03466 LysR substrate binding domain 90 292 1.0E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 3.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 SUPERFAMILY SSF53850 85 292 1.54E-39 T 29-03-2018 CKQ55_RS20275 befe417a5737f3a3b51ba9a877ae9b12 295 Gene3D G3DSA:1.10.10.10 2 89 2.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16620 5e97ead982b587f112541c3ec427b73c 107 SUPERFAMILY SSF140670 12 107 9.02E-51 T 29-03-2018 CKQ55_RS16620 5e97ead982b587f112541c3ec427b73c 107 Pfam PF08986 Domain of unknown function (DUF1889) 1 107 1.3E-47 T 29-03-2018 IPR015079 Protein of unknown function DUF1889 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 8.7E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.0E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 69 7.0E-30 T 29-03-2018 CKQ55_RS23920 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.694 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 PIRSF PIRSF006160 1 162 8.6E-66 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 4.0E-80 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.1E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-50 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 Gene3D G3DSA:3.30.1360.80 3 161 1.9E-64 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 4.3E-62 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CKQ55_RS19315 5af5de146703ca137756c52838a420bd 171 SUPERFAMILY SSF63411 4 162 1.74E-66 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 Gene3D G3DSA:1.10.10.10 1 70 9.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 Pfam PF00717 Peptidase S24-like 114 179 4.4E-15 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 Pfam PF01726 LexA DNA binding domain 1 65 2.8E-31 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 Gene3D G3DSA:2.10.109.10 80 198 3.0E-26 T 29-03-2018 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 3.9E-85 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 SUPERFAMILY SSF46785 3 69 1.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.477 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 SUPERFAMILY SSF51306 75 198 3.31E-38 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 6.0E-14 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 6.0E-14 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS11155 d78dce6efd5086abcc4861045e5fa182 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 6.0E-14 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 316 147.29 T 29-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 SUPERFAMILY SSF51735 1 155 2.37E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 Gene3D G3DSA:3.30.360.10 145 284 1.1E-67 T 29-03-2018 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 1.0E-13 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 PIRSF PIRSF015689 1 315 6.0E-133 T 29-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 SMART SM00859 5 123 2.7E-15 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 3.5E-63 T 29-03-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 308 3.0E-141 T 29-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 SUPERFAMILY SSF55347 131 284 1.96E-66 T 29-03-2018 CKQ55_RS25035 a110ebc15e7e267259c23adc25be2b31 316 Gene3D G3DSA:3.40.50.720 1 144 5.0E-15 T 29-03-2018 CKQ55_RS26855 65e1d20e11ce3793094c8d35927dfcec 202 SUPERFAMILY SSF52317 7 180 2.47E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS26855 65e1d20e11ce3793094c8d35927dfcec 202 Pfam PF01965 DJ-1/PfpI family 7 167 5.4E-22 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS26855 65e1d20e11ce3793094c8d35927dfcec 202 Gene3D G3DSA:3.40.50.880 4 198 2.8E-26 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS27695 3128ee30d8104cc58de5790341bee7f3 383 SUPERFAMILY SSF103473 3 381 3.01E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27695 3128ee30d8104cc58de5790341bee7f3 383 Gene3D G3DSA:1.20.1250.20 1 187 6.5E-26 T 29-03-2018 CKQ55_RS27695 3128ee30d8104cc58de5790341bee7f3 383 Gene3D G3DSA:1.20.1250.20 188 383 7.2E-15 T 29-03-2018 CKQ55_RS27695 3128ee30d8104cc58de5790341bee7f3 383 Pfam PF07690 Major Facilitator Superfamily 8 329 1.1E-31 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 Gene3D G3DSA:3.80.30.10 68 246 1.6E-40 T 29-03-2018 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 PIRSF PIRSF000371 1 47 3.7E-10 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 PIRSF PIRSF000371 44 246 1.2E-47 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 SUPERFAMILY SSF102114 23 216 7.65E-25 T 29-03-2018 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 3.1E-107 T 29-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 2.3E-18 T 29-03-2018 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CKQ55_RS02145 3b715b1b39e1716323049c3c1ae157f7 246 Pfam PF04055 Radical SAM superfamily 24 178 1.1E-31 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Gene3D G3DSA:3.30.190.20 134 248 5.8E-42 T 29-03-2018 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.14 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 SUPERFAMILY SSF52540 613 911 5.32E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Gene3D G3DSA:3.40.50.300 614 939 3.9E-55 T 29-03-2018 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Gene3D G3DSA:3.40.50.300 36 133 1.6E-4 T 29-03-2018 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Gene3D G3DSA:3.40.50.300 415 613 1.2E-20 T 29-03-2018 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Gene3D G3DSA:3.40.50.300 1 35 2.2E-8 T 29-03-2018 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 SUPERFAMILY SSF52540 4 204 5.72E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 SUPERFAMILY SSF52540 430 569 5.72E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS11075 9517d09adc897b3599c4b26cad257c3a 941 Gene3D G3DSA:1.10.8.280 285 405 2.1E-37 T 29-03-2018 CKQ55_RS06400 a511d1085fae09b8de77739191e8e28f 229 Pfam PF13280 WYL domain 138 223 1.6E-16 T 29-03-2018 IPR026881 WYL domain CKQ55_RS06400 a511d1085fae09b8de77739191e8e28f 229 Pfam PF08279 HTH domain 7 60 1.1E-16 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CKQ55_RS06400 a511d1085fae09b8de77739191e8e28f 229 SUPERFAMILY SSF46785 5 62 1.09E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06400 a511d1085fae09b8de77739191e8e28f 229 Gene3D G3DSA:1.10.10.10 1 64 1.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18740 1b24860de651e43da9374ca7f78fda4f 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 1.0E-77 T 29-03-2018 CKQ55_RS18740 1b24860de651e43da9374ca7f78fda4f 208 SUPERFAMILY SSF53335 11 204 9.49E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS18740 1b24860de651e43da9374ca7f78fda4f 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CKQ55_RS18740 1b24860de651e43da9374ca7f78fda4f 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 8.1E-94 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CKQ55_RS18740 1b24860de651e43da9374ca7f78fda4f 208 Gene3D G3DSA:3.40.50.150 9 206 4.6E-37 T 29-03-2018 CKQ55_RS18740 1b24860de651e43da9374ca7f78fda4f 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.391 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CKQ55_RS12915 971c0d3f5039c382354b2c8e3ab61801 156 Gene3D G3DSA:1.20.5.620 62 122 1.2E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CKQ55_RS12915 971c0d3f5039c382354b2c8e3ab61801 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.4E-40 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CKQ55_RS12915 971c0d3f5039c382354b2c8e3ab61801 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.257 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CKQ55_RS12915 971c0d3f5039c382354b2c8e3ab61801 156 SUPERFAMILY SSF81573 63 121 1.96E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CKQ55_RS12915 971c0d3f5039c382354b2c8e3ab61801 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.9E-62 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CKQ55_RS22320 ea0f04678317d05c724b68133c45afc3 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 2.7E-42 T 29-03-2018 IPR009678 Bacteriophage tail completion protein R CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 Hamap MF_00018 UPF0758 protein YicR [yicR]. 1 221 53.007 T 29-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 Pfam PF04002 RadC-like JAB domain 102 219 3.0E-45 T 29-03-2018 IPR025657 RadC-like JAB domain CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 SUPERFAMILY SSF102712 150 187 7.06E-5 T 29-03-2018 CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 SUPERFAMILY SSF47781 21 84 5.72E-8 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 Gene3D G3DSA:1.10.150.20 41 92 9.7E-4 T 29-03-2018 CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 8 221 4.4E-89 T 29-03-2018 IPR001405 RadC protein CKQ55_RS13705 fff69b63198f0037d5b0fee3079342f8 221 Gene3D G3DSA:3.40.140.10 96 221 2.8E-48 T 29-03-2018 CKQ55_RS15340 5aeae9e3ab06271f97647e6cf172c357 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-43 T 29-03-2018 CKQ55_RS15340 5aeae9e3ab06271f97647e6cf172c357 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15340 5aeae9e3ab06271f97647e6cf172c357 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 9.2E-38 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15340 5aeae9e3ab06271f97647e6cf172c357 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.012 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15340 5aeae9e3ab06271f97647e6cf172c357 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.0E-51 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15340 5aeae9e3ab06271f97647e6cf172c357 110 SUPERFAMILY SSF54843 1 109 6.28E-43 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS10435 0ac6035fb3f48a60c19ad0ec6628f2fb 101 Gene3D G3DSA:3.40.50.2300 1 97 1.7E-17 T 29-03-2018 CKQ55_RS10435 0ac6035fb3f48a60c19ad0ec6628f2fb 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 6.2E-14 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS10435 0ac6035fb3f48a60c19ad0ec6628f2fb 101 SUPERFAMILY SSF52794 3 95 1.28E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS25700 5a1b1b847d24563ceb8e14136dc2b34b 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 3.4E-137 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CKQ55_RS25700 5a1b1b847d24563ceb8e14136dc2b34b 286 SUPERFAMILY SSF53613 1 280 1.54E-75 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS25700 5a1b1b847d24563ceb8e14136dc2b34b 286 Gene3D G3DSA:3.40.1190.20 1 286 6.1E-62 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS25700 5a1b1b847d24563ceb8e14136dc2b34b 286 Pfam PF08543 Phosphomethylpyrimidine kinase 72 259 7.9E-15 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CKQ55_RS25700 5a1b1b847d24563ceb8e14136dc2b34b 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 53.799 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CKQ55_RS07470 ecad6ffa333381746d730d8bf719270a 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 1.4E-59 T 29-03-2018 IPR023370 TsaA-like domain CKQ55_RS07470 ecad6ffa333381746d730d8bf719270a 235 SUPERFAMILY SSF118196 1 230 1.83E-84 T 29-03-2018 IPR023370 TsaA-like domain CKQ55_RS07470 ecad6ffa333381746d730d8bf719270a 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.4E-40 T 29-03-2018 IPR023370 TsaA-like domain CKQ55_RS07470 ecad6ffa333381746d730d8bf719270a 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CKQ55_RS07470 ecad6ffa333381746d730d8bf719270a 235 Gene3D G3DSA:2.40.30.70 5 149 8.9E-52 T 29-03-2018 IPR023370 TsaA-like domain CKQ55_RS07470 ecad6ffa333381746d730d8bf719270a 235 Gene3D G3DSA:3.30.2310.10 150 231 3.5E-23 T 29-03-2018 CKQ55_RS06230 5d8ca9a2fd7f123a92f724db96e79051 491 SUPERFAMILY SSF103473 15 405 1.07E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06230 5d8ca9a2fd7f123a92f724db96e79051 491 Gene3D G3DSA:1.20.1250.20 1 200 2.1E-21 T 29-03-2018 CKQ55_RS06230 5d8ca9a2fd7f123a92f724db96e79051 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 6.2E-124 T 29-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 CKQ55_RS06230 5d8ca9a2fd7f123a92f724db96e79051 491 Pfam PF07690 Major Facilitator Superfamily 17 366 3.4E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS06230 5d8ca9a2fd7f123a92f724db96e79051 491 Gene3D G3DSA:1.20.1250.20 209 417 7.4E-18 T 29-03-2018 CKQ55_RS13095 8bcc908cc2fe563e33476e96e6f4d002 341 SMART SM00829 14 338 3.6E-32 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS13095 8bcc908cc2fe563e33476e96e6f4d002 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 133 3.0E-10 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS13095 8bcc908cc2fe563e33476e96e6f4d002 341 Gene3D G3DSA:3.90.180.10 1 340 2.0E-75 T 29-03-2018 CKQ55_RS13095 8bcc908cc2fe563e33476e96e6f4d002 341 SUPERFAMILY SSF51735 143 319 6.43E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13095 8bcc908cc2fe563e33476e96e6f4d002 341 SUPERFAMILY SSF50129 3 172 6.39E-39 T 29-03-2018 IPR011032 GroES-like CKQ55_RS13095 8bcc908cc2fe563e33476e96e6f4d002 341 Pfam PF00107 Zinc-binding dehydrogenase 177 302 1.7E-30 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 Gene3D G3DSA:1.10.10.10 81 151 2.3E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 SUPERFAMILY SSF46785 104 149 2.77E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 SMART SM00345 12 70 2.0E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 SMART SM00345 92 148 0.071 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 5.4E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 SUPERFAMILY SSF48008 159 291 1.44E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 Gene3D G3DSA:1.20.120.530 152 297 4.2E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 Pfam PF07729 FCD domain 162 285 3.3E-18 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 Gene3D G3DSA:1.10.10.10 1 72 8.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 SUPERFAMILY SSF46785 7 78 3.86E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01685 5932b991de2f22e7ae6dc8948bdf369f 298 SMART SM00895 160 286 1.4E-13 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS23860 d9abad0472c89cea374300318c15bf04 427 Pfam PF04403 Paraquat-inducible protein A 263 418 4.4E-42 T 29-03-2018 IPR007498 Paraquat-inducible protein A CKQ55_RS23860 d9abad0472c89cea374300318c15bf04 427 Pfam PF04403 Paraquat-inducible protein A 68 217 9.5E-37 T 29-03-2018 IPR007498 Paraquat-inducible protein A CKQ55_RS23860 d9abad0472c89cea374300318c15bf04 427 SUPERFAMILY SSF48695 211 255 2.1E-5 T 29-03-2018 IPR011031 Multihaem cytochrome CKQ55_RS23860 d9abad0472c89cea374300318c15bf04 427 Gene3D G3DSA:1.20.1070.10 115 351 1.1E-4 T 29-03-2018 CKQ55_RS23860 d9abad0472c89cea374300318c15bf04 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 24 417 8.4E-182 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CKQ55_RS06630 73c0d50a597c49e597ca3922fb54a16d 406 Gene3D G3DSA:1.20.1560.10 70 284 3.3E-15 T 29-03-2018 CKQ55_RS06630 73c0d50a597c49e597ca3922fb54a16d 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.1E-163 T 29-03-2018 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 CKQ55_RS06630 73c0d50a597c49e597ca3922fb54a16d 406 Gene3D G3DSA:1.20.1560.10 297 392 0.002 T 29-03-2018 CKQ55_RS06630 73c0d50a597c49e597ca3922fb54a16d 406 SUPERFAMILY SSF90123 77 389 2.51E-9 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS20495 e498a24bdb4fbaea7e4980474e3002d1 467 SUPERFAMILY SSF53720 34 458 2.75E-63 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS20495 e498a24bdb4fbaea7e4980474e3002d1 467 Gene3D G3DSA:3.40.605.10 20 252 6.7E-31 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS20495 e498a24bdb4fbaea7e4980474e3002d1 467 Pfam PF00171 Aldehyde dehydrogenase family 35 422 3.0E-32 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS20495 e498a24bdb4fbaea7e4980474e3002d1 467 Gene3D G3DSA:3.40.309.10 253 425 2.0E-27 T 29-03-2018 CKQ55_RS20495 e498a24bdb4fbaea7e4980474e3002d1 467 PIRSF PIRSF036410 1 467 5.4E-212 T 29-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 SMART SM00421 135 192 7.6E-25 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 Gene3D G3DSA:1.10.10.10 124 195 7.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 SUPERFAMILY SSF46894 128 193 5.1E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.2E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.2E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.2E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 Gene3D G3DSA:3.40.50.2300 1 123 2.7E-30 T 29-03-2018 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 SMART SM00448 2 112 8.2E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 3.8E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS13235 2a48e2dc93a9eecde94a95cd5b5bbb1f 197 SUPERFAMILY SSF52172 1 125 2.13E-27 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 Gene3D G3DSA:3.20.20.80 1 474 3.2E-153 T 29-03-2018 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 7.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 7.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 7.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 7.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 7.3E-16 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 Pfam PF00232 Glycosyl hydrolase family 1 2 470 7.8E-134 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 SUPERFAMILY SSF51445 2 471 5.01E-160 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS19130 2d11f1ebe4f1be20fbce60c93c96e951 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CKQ55_RS26345 0da1a859a33fd87f8d13564e9f5ef452 325 PIRSF PIRSF034367 1 325 2.2E-193 T 29-03-2018 IPR015004 Protein of unknown function DUF1852 CKQ55_RS26345 0da1a859a33fd87f8d13564e9f5ef452 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 9.1E-183 T 29-03-2018 IPR015004 Protein of unknown function DUF1852 CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 Gene3D G3DSA:3.40.50.300 9 335 1.6E-77 T 29-03-2018 CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 SMART SM00382 47 239 4.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 SUPERFAMILY SSF52540 14 261 1.82E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 2.6E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 6.8E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS14190 e138a542a6884b97cef33d19045f7f02 337 Pfam PF00005 ABC transporter 38 189 8.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-37 T 29-03-2018 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.415 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.2E-40 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 Gene3D G3DSA:1.10.287.10 2 89 6.2E-37 T 29-03-2018 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 Pfam PF00312 Ribosomal protein S15 8 88 6.6E-38 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 SUPERFAMILY SSF47060 3 89 1.68E-35 T 29-03-2018 IPR009068 S15/NS1, RNA-binding CKQ55_RS16100 bec9b1372543d841f38973f8f144d473 89 SMART SM01387 8 88 3.0E-53 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS06470 81f4538eb7cc5144e6c186066c3b341f 181 Gene3D G3DSA:3.30.70.100 5 98 5.7E-15 T 29-03-2018 CKQ55_RS06470 81f4538eb7cc5144e6c186066c3b341f 181 Pfam PF03992 Antibiotic biosynthesis monooxygenase 9 77 6.7E-8 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CKQ55_RS06470 81f4538eb7cc5144e6c186066c3b341f 181 SUPERFAMILY SSF54909 4 96 5.37E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS16135 1809b2fc65fc97b14ef1a331df0b845b 335 Pfam PF00296 Luciferase-like monooxygenase 8 303 1.1E-34 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS16135 1809b2fc65fc97b14ef1a331df0b845b 335 SUPERFAMILY SSF51679 7 327 1.96E-86 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS16135 1809b2fc65fc97b14ef1a331df0b845b 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 7.7E-134 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CKQ55_RS16135 1809b2fc65fc97b14ef1a331df0b845b 335 Gene3D G3DSA:3.20.20.30 6 329 1.2E-72 T 29-03-2018 CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 SUPERFAMILY SSF46689 213 256 4.21E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 Pfam PF02311 AraC-like ligand binding domain 32 98 3.6E-5 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 Gene3D G3DSA:1.10.10.60 214 263 1.1E-8 T 29-03-2018 CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 Pfam PF12833 Helix-turn-helix domain 180 256 5.0E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 Gene3D G3DSA:2.60.120.10 2 167 2.2E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 Gene3D G3DSA:1.10.10.60 168 213 3.8E-6 T 29-03-2018 CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 SUPERFAMILY SSF51182 14 177 3.76E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS28475 c3034fcb0f2b612c0d9b0ea1c29122d2 264 SMART SM00342 174 256 2.3E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01570 3cbf3d347baead18e44b82aef9b53a95 469 Pfam PF03972 MmgE/PrpD family 8 450 2.8E-69 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 CKQ55_RS01570 3cbf3d347baead18e44b82aef9b53a95 469 SUPERFAMILY SSF103378 5 457 1.03E-79 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 CKQ55_RS01570 3cbf3d347baead18e44b82aef9b53a95 469 Gene3D G3DSA:1.10.4100.10 1 315 4.3E-69 T 29-03-2018 CKQ55_RS17190 b06a7130e087c1bc9f2cdb2ffc418c4c 81 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 6 80 2.0E-12 T 29-03-2018 IPR020263 Uncharacterised protein family YqgD CKQ55_RS17190 b06a7130e087c1bc9f2cdb2ffc418c4c 81 Pfam PF10885 Protein of unknown function (DUF2684) 7 63 4.7E-16 T 29-03-2018 IPR020263 Uncharacterised protein family YqgD CKQ55_RS13870 c4a667ff820f5b186f0700ed6d270f47 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 8.3E-32 T 29-03-2018 IPR021230 Protein of unknown function DUF2810 CKQ55_RS26415 da845af9d853e864409271a22f2579f0 156 Gene3D G3DSA:1.10.10.60 1 28 5.0E-12 T 29-03-2018 CKQ55_RS26415 da845af9d853e864409271a22f2579f0 156 SUPERFAMILY SSF47413 4 63 1.45E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS26415 da845af9d853e864409271a22f2579f0 156 Pfam PF01381 Helix-turn-helix 7 60 6.2E-17 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS26415 da845af9d853e864409271a22f2579f0 156 Gene3D G3DSA:1.10.260.40 29 93 0.0011 T 29-03-2018 CKQ55_RS26415 da845af9d853e864409271a22f2579f0 156 Pfam PF13239 2TM domain 77 154 8.1E-15 T 29-03-2018 IPR025698 2TM domain CKQ55_RS26415 da845af9d853e864409271a22f2579f0 156 SMART SM00530 6 60 5.5E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 Pfam PF00303 Thymidylate synthase 2 264 1.5E-128 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.553 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 Gene3D G3DSA:3.30.572.10 1 264 1.0E-134 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 SUPERFAMILY SSF55831 1 264 7.2E-132 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.1E-42 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.2E-93 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.1E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.1E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.1E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.1E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS18105 85149c9f99b3cdf318740cbbc02a7686 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.1E-47 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CKQ55_RS04870 c36cd4489caaecdf92df94af621ba93e 770 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 53 314 1.8E-77 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CKQ55_RS04870 c36cd4489caaecdf92df94af621ba93e 770 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 655 726 2.2E-14 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CKQ55_RS04870 c36cd4489caaecdf92df94af621ba93e 770 SMART SM00640 53 770 1.8E-100 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CKQ55_RS04870 c36cd4489caaecdf92df94af621ba93e 770 SUPERFAMILY SSF75005 45 322 1.82E-103 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS04870 c36cd4489caaecdf92df94af621ba93e 770 SUPERFAMILY SSF75005 658 727 1.82E-103 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS04870 c36cd4489caaecdf92df94af621ba93e 770 Gene3D G3DSA:2.115.10.20 56 742 3.6E-106 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS25915 9c7c683e7a8ef5becedc44313a29da85 462 Gene3D G3DSA:3.40.50.1220 289 462 4.0E-91 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS25915 9c7c683e7a8ef5becedc44313a29da85 462 PIRSF PIRSF000204 1 462 1.2E-237 T 29-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CKQ55_RS25915 9c7c683e7a8ef5becedc44313a29da85 462 SUPERFAMILY SSF52467 289 462 2.38E-78 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS25915 9c7c683e7a8ef5becedc44313a29da85 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 6.9E-204 T 29-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CKQ55_RS24155 c85ae4ecc295a4f45625a6ecf0e87b94 463 Pfam PF16966 Porin-like glycoporin RafY 98 463 1.2E-188 T 29-03-2018 IPR016963 Glycoporin RafY CKQ55_RS24155 c85ae4ecc295a4f45625a6ecf0e87b94 463 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 8.4E-13 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CKQ55_RS24155 c85ae4ecc295a4f45625a6ecf0e87b94 463 Gene3D G3DSA:1.20.5.1070 21 108 2.3E-4 T 29-03-2018 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 Pfam PF03170 Bacterial cellulose synthase subunit 73 681 6.7E-225 T 29-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 PRINTS PR01440 Cellulose synthase subunit B signature 101 122 5.7E-25 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 PRINTS PR01440 Cellulose synthase subunit B signature 233 256 5.7E-25 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 PRINTS PR01440 Cellulose synthase subunit B signature 530 549 5.7E-25 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 PRINTS PR01440 Cellulose synthase subunit B signature 191 212 5.7E-25 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 PRINTS PR01440 Cellulose synthase subunit B signature 314 335 5.7E-25 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14280 d17fe3f5ecfee5c6f32201c530fd3f21 780 PRINTS PR01440 Cellulose synthase subunit B signature 397 418 5.7E-25 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 PIRSF PIRSF001365 8 306 4.1E-56 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 Gene3D G3DSA:3.20.20.70 5 304 1.8E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 5.6E-8 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 111 127 5.6E-8 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 5.6E-8 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 SMART SM01130 10 296 9.2E-59 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 Pfam PF00701 Dihydrodipicolinate synthetase family 11 293 1.2E-48 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS01720 fa27234fb7452289c211d0a3e4a77d96 307 SUPERFAMILY SSF51569 10 295 5.02E-68 T 29-03-2018 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Gene3D G3DSA:2.40.30.10 514 565 0.47 T 29-03-2018 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Gene3D G3DSA:3.30.930.10 2 252 2.6E-117 T 29-03-2018 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Pfam PF02272 DHHA1 domain 733 871 1.8E-31 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 SUPERFAMILY SSF55681 4 255 6.71E-108 T 29-03-2018 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 3.9E-18 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 SUPERFAMILY SSF50447 455 551 1.54E-21 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Gene3D G3DSA:3.30.980.10 566 713 1.1E-47 T 29-03-2018 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.6E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.6E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.6E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.6E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.6E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 SUPERFAMILY SSF101353 256 465 1.44E-61 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 SUPERFAMILY SSF55186 552 709 5.62E-52 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 209.397 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 Pfam PF01411 tRNA synthetases class II (A) 7 555 7.0E-239 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CKQ55_RS19260 69b465a07b167273eef76925e183248b 875 SMART SM00863 653 696 3.6E-22 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 3.6E-90 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 Gene3D G3DSA:1.20.91.10 227 308 7.1E-12 T 29-03-2018 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 PRINTS PR00335 TrkA potassium uptake protein signature 419 433 6.0E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 PRINTS PR00335 TrkA potassium uptake protein signature 402 416 6.0E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 PRINTS PR00335 TrkA potassium uptake protein signature 448 458 6.0E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 PRINTS PR00335 TrkA potassium uptake protein signature 459 469 6.0E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 SUPERFAMILY SSF51735 402 530 7.14E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 Pfam PF02254 TrkA-N domain 403 513 2.0E-24 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 46.918 T 29-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 Gene3D G3DSA:3.40.50.720 397 561 2.5E-19 T 29-03-2018 CKQ55_RS15220 fc3fa9b44d2997a2fb0b499a63e46ee0 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 1.3E-65 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CKQ55_RS08800 25b0f90779b1edf51b9e22d655541841 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CKQ55_RS08800 25b0f90779b1edf51b9e22d655541841 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CKQ55_RS08800 25b0f90779b1edf51b9e22d655541841 259 SUPERFAMILY SSF51556 5 258 2.11E-77 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS08800 25b0f90779b1edf51b9e22d655541841 259 Gene3D G3DSA:3.20.20.140 3 259 2.7E-77 T 29-03-2018 CKQ55_RS08800 25b0f90779b1edf51b9e22d655541841 259 PIRSF PIRSF005902 1 259 2.9E-72 T 29-03-2018 IPR001130 TatD family GO:0016788 CKQ55_RS08800 25b0f90779b1edf51b9e22d655541841 259 Pfam PF01026 TatD related DNase 6 256 4.7E-71 T 29-03-2018 IPR001130 TatD family GO:0016788 CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 290 2.0E-61 T 29-03-2018 CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 SUPERFAMILY SSF51735 49 290 4.66E-81 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 Gene3D G3DSA:3.40.50.720 2 294 2.6E-79 T 29-03-2018 CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 1.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 1.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 1.2E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25470 fff2f973fab39e786353c39966ee4d76 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 1.4E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 PRINTS PR00773 GrpE protein signature 156 171 8.5E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 PRINTS PR00773 GrpE protein signature 73 89 8.5E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 PRINTS PR00773 GrpE protein signature 101 116 8.5E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 PRINTS PR00773 GrpE protein signature 183 202 8.5E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 SUPERFAMILY SSF58014 53 148 1.18E-25 T 29-03-2018 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 Hamap MF_01151 Protein GrpE [grpE]. 5 204 20.352 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 Gene3D G3DSA:2.30.22.10 148 204 4.5E-19 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 SUPERFAMILY SSF51064 149 204 1.57E-16 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 Pfam PF01025 GrpE 45 204 1.2E-45 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 Gene3D G3DSA:3.90.20.20 44 147 8.7E-29 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CKQ55_RS19715 543828685f7b3c5b06e40f7bb864e124 206 ProSitePatterns PS01071 grpE protein signature. 159 202 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 21 2.2E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 Gene3D G3DSA:2.60.40.420 28 164 3.9E-18 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 57.445 T 29-03-2018 IPR026589 Cell division protein FtsP GO:0043093 CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 SUPERFAMILY SSF49503 172 311 7.62E-28 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 Pfam PF07731 Multicopper oxidase 357 468 4.9E-12 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 Pfam PF07732 Multicopper oxidase 52 166 2.9E-22 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 SUPERFAMILY SSF49503 316 466 1.68E-18 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 SUPERFAMILY SSF49503 3 165 2.04E-20 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 Gene3D G3DSA:2.60.40.420 346 470 3.2E-16 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS16865 f95aa7755315f4a94ee4c61fc4afa02c 470 Gene3D G3DSA:2.60.40.420 166 298 3.1E-23 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Pfam PF00072 Response regulator receiver domain 669 778 4.5E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SMART SM00388 292 357 3.1E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Gene3D G3DSA:1.10.287.130 282 353 2.8E-20 T 29-03-2018 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF52172 666 794 5.55E-35 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SMART SM00304 200 252 1.7E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 2.0E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Gene3D G3DSA:1.20.120.160 803 916 5.3E-19 T 29-03-2018 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 32 177 1.4E-52 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SMART SM00448 667 780 3.6E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 4.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 6.8E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 6.8E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 6.8E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 6.8E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Pfam PF01627 Hpt domain 826 906 5.8E-13 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Gene3D G3DSA:3.40.50.2300 653 788 3.3E-35 T 29-03-2018 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 Gene3D G3DSA:3.30.565.10 361 527 1.0E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF158472 200 249 7.45E-5 T 29-03-2018 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF47384 277 358 6.28E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SMART SM00073 817 912 4.2E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF52172 536 651 7.85E-5 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF55874 346 517 2.49E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF47226 763 776 3.66E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SUPERFAMILY SSF47226 806 907 3.66E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS18575 ea41a011546cbfc60933cfc03f610129 917 SMART SM00387 404 520 2.2E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 SUPERFAMILY SSF55604 10 81 3.01E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 Gene3D G3DSA:3.30.1360.60 4 78 4.1E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 6.0E-217 T 29-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 Pfam PF00367 phosphotransferase system, EIIB 11 40 1.9E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.0E-16 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 7.4E-33 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS10095 66cfe73b0a240809fddb76de37d9d869 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Gene3D G3DSA:3.30.230.40 255 355 2.5E-31 T 29-03-2018 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 SUPERFAMILY SSF56784 1 156 1.01E-37 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Gene3D G3DSA:3.30.230.40 165 253 9.6E-34 T 29-03-2018 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.234 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 2.0E-78 T 29-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 SUPERFAMILY SSF54211 252 342 2.78E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Gene3D G3DSA:3.40.50.1000 2 164 6.0E-23 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 2.4E-64 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.692 T 29-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 9.3E-45 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 SUPERFAMILY SSF54211 167 251 8.09E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 5 133 6.2E-6 T 29-03-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 CKQ55_RS22750 77906c09bc916912ca1fc71ef2ae45cb 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 3.0E-26 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 Gene3D G3DSA:3.40.1190.20 47 312 4.5E-54 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 3.3E-99 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 SUPERFAMILY SSF53613 7 291 4.21E-69 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.9E-68 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.4E-101 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 Gene3D G3DSA:2.20.150.10 12 46 1.5E-10 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS21700 b881d244db8f5901e7e0e67aed5843f4 312 PIRSF PIRSF000535 2 311 3.5E-117 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 Gene3D G3DSA:2.40.50.140 297 360 1.7E-5 T 29-03-2018 CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 SMART SM00382 43 243 1.4E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 SUPERFAMILY SSF52540 19 258 2.66E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 Gene3D G3DSA:3.40.50.300 16 270 5.9E-71 T 29-03-2018 CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 Pfam PF00005 ABC transporter 34 176 2.6E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 SUPERFAMILY SSF50331 253 367 3.74E-11 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 Pfam PF08402 TOBE domain 294 366 1.7E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS13295 12d052e7d21cca5e81b3bcb2c57d90a7 370 TIGRFAM TIGR03258 PhnT: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 12 369 9.5E-193 T 29-03-2018 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT GO:0005524|GO:0006810|GO:0016020 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 8.8E-232 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 SUPERFAMILY SSF52374 364 571 2.23E-136 T 29-03-2018 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 SUPERFAMILY SSF52374 1 192 2.23E-136 T 29-03-2018 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 SUPERFAMILY SSF52374 609 641 2.23E-136 T 29-03-2018 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.6E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.6E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.6E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.6E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.6E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 SUPERFAMILY SSF46589 884 947 4.13E-16 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 5.8E-42 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Gene3D G3DSA:3.40.50.620 2 630 1.4E-134 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Gene3D G3DSA:1.10.730.10 631 816 2.9E-55 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Gene3D G3DSA:1.10.287.380 877 946 1.4E-23 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 1.8E-16 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 SUPERFAMILY SSF50677 191 365 1.01E-56 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.184 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CKQ55_RS10020 db75feea60ad2b3c7fbd0bc30621da49 951 SUPERFAMILY SSF47323 642 899 1.16E-69 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 SUPERFAMILY SSF55874 198 346 1.13E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 Pfam PF00989 PAS fold 11 97 1.1E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 SUPERFAMILY SSF47384 121 186 2.75E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 5.6E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 SMART SM00388 129 194 5.6E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 SUPERFAMILY SSF55785 11 104 1.08E-5 T 29-03-2018 IPR000014 PAS domain CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 SMART SM00091 7 75 4.0E-7 T 29-03-2018 IPR000014 PAS domain CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 SMART SM00387 233 349 6.4E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 Gene3D G3DSA:3.30.450.20 9 103 1.9E-9 T 29-03-2018 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 Gene3D G3DSA:3.30.565.10 194 349 3.0E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 2.0E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS12730 baee3f5b59438ade86c6c958095a7637 349 Gene3D G3DSA:1.10.287.130 118 187 1.8E-13 T 29-03-2018 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 SMART SM00357 6 70 4.4E-30 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 Gene3D G3DSA:2.40.50.140 1 70 6.1E-29 T 29-03-2018 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 PRINTS PR00050 Cold shock protein signature 43 61 2.0E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 PRINTS PR00050 Cold shock protein signature 28 37 2.0E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 PRINTS PR00050 Cold shock protein signature 7 22 2.0E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.8E-32 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 PIRSF PIRSF002599 1 70 6.2E-25 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS01495 f1dab05b85dee7c32f4ccae93869f383 70 SUPERFAMILY SSF50249 3 69 2.74E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 Pfam PF00694 Aconitase C-terminal domain 640 689 2.1E-6 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 Gene3D G3DSA:3.30.499.10 11 184 2.9E-24 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 Pfam PF00330 Aconitase family (aconitate hydratase) 41 470 2.1E-77 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 Gene3D G3DSA:3.40.1060.10 185 297 2.7E-27 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 Gene3D G3DSA:3.20.19.10 523 759 3.9E-47 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 Gene3D G3DSA:3.30.499.10 300 521 2.4E-30 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 SUPERFAMILY SSF53732 27 508 4.32E-112 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08500 a5aa2d9659cb518edeff38ce93ff2cf9 762 SUPERFAMILY SSF52016 516 754 3.34E-32 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 Pfam PF01979 Amidohydrolase family 47 334 8.7E-10 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 Gene3D G3DSA:2.30.40.10 1 65 1.1E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 SUPERFAMILY SSF51556 51 316 6.81E-72 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 Gene3D G3DSA:3.20.20.140 66 315 5.5E-45 T 29-03-2018 CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 364 8.1E-173 T 29-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 PIRSF PIRSF039004 1 375 3.5E-132 T 29-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CKQ55_RS10175 e5e2e4dcb6d94bd32e1f77759a09c25d 377 SUPERFAMILY SSF51338 1 59 3.02E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS13750 c4e7fa23c01eb044747ab16cc060e61d 375 SUPERFAMILY SSF53756 5 373 2.15E-69 T 29-03-2018 CKQ55_RS13750 c4e7fa23c01eb044747ab16cc060e61d 375 Gene3D G3DSA:3.40.50.2000 192 357 6.9E-32 T 29-03-2018 CKQ55_RS13750 c4e7fa23c01eb044747ab16cc060e61d 375 Pfam PF13439 Glycosyltransferase Family 4 17 183 1.5E-18 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CKQ55_RS13750 c4e7fa23c01eb044747ab16cc060e61d 375 Gene3D G3DSA:3.40.50.2000 9 191 1.1E-5 T 29-03-2018 CKQ55_RS13750 c4e7fa23c01eb044747ab16cc060e61d 375 Pfam PF00534 Glycosyl transferases group 1 196 336 3.6E-25 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 SUPERFAMILY SSF51735 2 232 5.91E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 Pfam PF00106 short chain dehydrogenase 2 187 1.5E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26245 a2fc2d4305d4bd39ed0f424f345a6abc 249 Gene3D G3DSA:3.40.50.720 1 235 1.9E-58 T 29-03-2018 CKQ55_RS29900 44552b879221068250b30a443b289713 284 Gene3D G3DSA:3.20.20.100 2 284 1.0E-79 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS29900 44552b879221068250b30a443b289713 284 PRINTS PR00069 Aldo-keto reductase signature 41 65 1.7E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29900 44552b879221068250b30a443b289713 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 1.7E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29900 44552b879221068250b30a443b289713 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 1.7E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29900 44552b879221068250b30a443b289713 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 1.7E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29900 44552b879221068250b30a443b289713 284 Pfam PF00248 Aldo/keto reductase family 17 271 6.6E-55 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS29900 44552b879221068250b30a443b289713 284 SUPERFAMILY SSF51430 10 274 7.2E-78 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS29900 44552b879221068250b30a443b289713 284 PIRSF PIRSF000097 1 118 1.8E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29900 44552b879221068250b30a443b289713 284 PIRSF PIRSF000097 115 279 1.9E-24 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 Gene3D G3DSA:4.10.520.10 1 99 6.8E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 1.5E-54 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 SMART SM00411 3 92 2.2E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.989 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.0E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 SUPERFAMILY SSF47729 3 93 2.06E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CKQ55_RS24805 5bb11caaa2b8a1f5ff7213e1b17ec4fc 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 SUPERFAMILY SSF46785 418 485 1.36E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:1.10.10.10 490 546 3.0E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:1.10.10.10 418 481 3.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Pfam PF09107 Elongation factor SelB, winged helix 566 606 3.3E-18 T 29-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:3.40.50.300 50 172 1.3E-21 T 29-03-2018 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Pfam PF03144 Elongation factor Tu domain 2 189 256 2.4E-8 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:2.40.30.10 173 281 2.0E-20 T 29-03-2018 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:3.40.50.300 1 49 2.1E-9 T 29-03-2018 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:1.10.10.10 549 607 3.0E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 SUPERFAMILY SSF50465 275 351 5.04E-7 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 SUPERFAMILY SSF46785 489 547 4.69E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 SUPERFAMILY SSF52540 2 165 1.04E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 SUPERFAMILY SSF46785 552 608 5.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Gene3D G3DSA:2.40.30.10 282 335 8.7E-7 T 29-03-2018 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 608 3.5E-240 T 29-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 SUPERFAMILY SSF50447 175 293 3.93E-24 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Pfam PF00009 Elongation factor Tu GTP binding domain 2 163 1.2E-31 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS13915 08db6a0bc998780e6f12cdf4306d5492 613 Pfam PF09106 Elongation factor SelB, winged helix 425 481 4.2E-15 T 29-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CKQ55_RS23825 994fe79f049b31849f8d87b39bf40b71 183 Pfam PF05229 Spore Coat Protein U domain 32 180 2.7E-26 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS23825 994fe79f049b31849f8d87b39bf40b71 183 SMART SM00972 121 180 5.7E-12 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS07140 2e6aa4f06bb00dd46b081dc04067b83b 183 Pfam PF00583 Acetyltransferase (GNAT) family 22 130 5.2E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS07140 2e6aa4f06bb00dd46b081dc04067b83b 183 SUPERFAMILY SSF55729 6 138 1.63E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS07140 2e6aa4f06bb00dd46b081dc04067b83b 183 Gene3D G3DSA:3.40.630.30 1 133 8.9E-17 T 29-03-2018 CKQ55_RS24635 4d072c6fc873c830716c9d1e21d11bed 306 Gene3D G3DSA:1.10.3720.10 2 294 3.8E-41 T 29-03-2018 CKQ55_RS24635 4d072c6fc873c830716c9d1e21d11bed 306 SUPERFAMILY SSF161098 88 291 1.96E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24635 4d072c6fc873c830716c9d1e21d11bed 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 9.9E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 Gene3D G3DSA:3.40.50.1980 176 298 3.5E-29 T 29-03-2018 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 SUPERFAMILY SSF53807 26 298 1.72E-88 T 29-03-2018 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 Gene3D G3DSA:3.40.50.1980 30 175 4.9E-44 T 29-03-2018 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 4.7E-72 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 210 228 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 73 92 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 233 250 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 54 72 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 184 201 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 255 273 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00691 Adhesin B signature 29 50 1.0E-35 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00690 Adhesin family signature 237 255 3.6E-41 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00690 Adhesin family signature 60 73 3.6E-41 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00690 Adhesin family signature 263 282 3.6E-41 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00690 Adhesin family signature 29 47 3.6E-41 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00690 Adhesin family signature 73 90 3.6E-41 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19000 9b926e4f231d7b56caa434583ef5d634 305 PRINTS PR00690 Adhesin family signature 184 205 3.6E-41 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 Gene3D G3DSA:3.40.1080.10 276 525 5.2E-47 T 29-03-2018 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 PIRSF PIRSF000858 1 525 6.3E-174 T 29-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 Pfam PF01144 Coenzyme A transferase 9 242 5.1E-28 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 SUPERFAMILY SSF100950 277 519 1.54E-64 T 29-03-2018 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 SUPERFAMILY SSF100950 2 247 4.47E-71 T 29-03-2018 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 Gene3D G3DSA:3.40.1080.10 1 269 3.6E-67 T 29-03-2018 CKQ55_RS17695 c3bbc1a736c9ace6f68708b41bae2e94 530 SMART SM00882 5 243 8.2E-52 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS29615 006d7204f19a96f0de39021aff18f110 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 162 1.3E-34 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CKQ55_RS29615 006d7204f19a96f0de39021aff18f110 196 PIRSF PIRSF030780 1 195 2.6E-116 T 29-03-2018 IPR016956 Inner membrane protein YdjM CKQ55_RS26795 0b88a6a003917a37f5cfb53aba792b53 331 SUPERFAMILY SSF51735 127 309 1.1E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26795 0b88a6a003917a37f5cfb53aba792b53 331 SUPERFAMILY SSF52283 55 160 2.02E-23 T 29-03-2018 CKQ55_RS26795 0b88a6a003917a37f5cfb53aba792b53 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 133 308 1.0E-56 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS26795 0b88a6a003917a37f5cfb53aba792b53 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 241 7.9E-18 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS26795 0b88a6a003917a37f5cfb53aba792b53 331 Gene3D G3DSA:3.40.50.720 9 138 1.7E-25 T 29-03-2018 CKQ55_RS26795 0b88a6a003917a37f5cfb53aba792b53 331 Gene3D G3DSA:3.40.50.720 139 311 1.3E-51 T 29-03-2018 CKQ55_RS23200 ce9dd628df1e05ace0a9052d5ddc95b0 410 SMART SM00922 153 250 4.4E-9 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS23200 ce9dd628df1e05ace0a9052d5ddc95b0 410 Pfam PF13378 Enolase C-terminal domain-like 168 374 3.0E-31 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS23200 ce9dd628df1e05ace0a9052d5ddc95b0 410 Gene3D G3DSA:3.20.20.120 149 369 5.0E-38 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS23200 ce9dd628df1e05ace0a9052d5ddc95b0 410 SUPERFAMILY SSF54826 7 130 2.7E-12 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS23200 ce9dd628df1e05ace0a9052d5ddc95b0 410 SUPERFAMILY SSF51604 170 377 4.06E-36 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS23200 ce9dd628df1e05ace0a9052d5ddc95b0 410 Gene3D G3DSA:3.30.390.10 1 148 6.8E-16 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS10890 a2a4782e56483efc14e29ffb064e5d35 295 SUPERFAMILY SSF46689 16 88 1.97E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10890 a2a4782e56483efc14e29ffb064e5d35 295 SUPERFAMILY SSF53697 103 287 4.08E-41 T 29-03-2018 CKQ55_RS10890 a2a4782e56483efc14e29ffb064e5d35 295 Pfam PF01380 SIS domain 137 265 2.1E-31 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS10890 a2a4782e56483efc14e29ffb064e5d35 295 Gene3D G3DSA:1.10.10.10 14 84 7.0E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10890 a2a4782e56483efc14e29ffb064e5d35 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 89 2.0E-24 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS10890 a2a4782e56483efc14e29ffb064e5d35 295 Gene3D G3DSA:3.40.50.10490 85 284 8.4E-34 T 29-03-2018 CKQ55_RS30210 49578a94e7f4b60f591b0fc2b01e512e 133 SUPERFAMILY SSF81593 8 110 3.37E-5 T 29-03-2018 CKQ55_RS30210 49578a94e7f4b60f591b0fc2b01e512e 133 Gene3D G3DSA:1.20.120.330 1 65 8.5E-5 T 29-03-2018 CKQ55_RS30210 49578a94e7f4b60f591b0fc2b01e512e 133 Pfam PF01934 Protein of unknown function DUF86 13 109 5.2E-23 T 29-03-2018 IPR008201 Protein of unknown function DUF86 CKQ55_RS30210 49578a94e7f4b60f591b0fc2b01e512e 133 Gene3D G3DSA:1.20.120.580 66 126 3.4E-15 T 29-03-2018 IPR008201 Protein of unknown function DUF86 CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 Pfam PF00005 ABC transporter 346 489 8.1E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 Pfam PF00005 ABC transporter 26 165 1.6E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 Gene3D G3DSA:3.40.50.300 2 281 3.4E-52 T 29-03-2018 CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 Gene3D G3DSA:3.40.50.300 326 562 6.6E-60 T 29-03-2018 CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 SMART SM00382 32 266 3.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 SMART SM00382 354 535 3.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 SUPERFAMILY SSF52540 325 547 6.2E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03230 bd9dd2f32bc976c68fb158579d8601fa 579 SUPERFAMILY SSF52540 5 226 3.52E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20110 4b8f158d6d4fb53afd88ee652142e8d2 246 PIRSF PIRSF004808 1 246 2.7E-79 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS20110 4b8f158d6d4fb53afd88ee652142e8d2 246 Gene3D G3DSA:3.40.1280.10 1 165 7.4E-44 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS20110 4b8f158d6d4fb53afd88ee652142e8d2 246 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 4.2E-95 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS20110 4b8f158d6d4fb53afd88ee652142e8d2 246 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.7E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CKQ55_RS20110 4b8f158d6d4fb53afd88ee652142e8d2 246 SUPERFAMILY SSF75217 4 176 6.54E-40 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS19225 7c9407d465d5ed67837f22f4e812fd65 225 SUPERFAMILY SSF52540 2 205 3.03E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19225 7c9407d465d5ed67837f22f4e812fd65 225 Gene3D G3DSA:3.40.50.300 1 219 1.0E-41 T 29-03-2018 CKQ55_RS19225 7c9407d465d5ed67837f22f4e812fd65 225 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS19225 7c9407d465d5ed67837f22f4e812fd65 225 Pfam PF00005 ABC transporter 20 157 5.7E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS19225 7c9407d465d5ed67837f22f4e812fd65 225 SMART SM00382 26 214 1.4E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04615 ec902bfd98155f6f67c49374d66d85a9 445 Pfam PF00202 Aminotransferase class-III 35 435 5.7E-95 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS04615 ec902bfd98155f6f67c49374d66d85a9 445 SUPERFAMILY SSF53383 12 439 1.66E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS04615 ec902bfd98155f6f67c49374d66d85a9 445 Gene3D G3DSA:3.40.640.10 198 324 1.2E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS04615 ec902bfd98155f6f67c49374d66d85a9 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS04615 ec902bfd98155f6f67c49374d66d85a9 445 Gene3D G3DSA:3.90.1150.10 6 197 2.4E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS04615 ec902bfd98155f6f67c49374d66d85a9 445 Gene3D G3DSA:3.90.1150.10 325 445 2.0E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS30580 816807ba9a7af498966e529ead08349f 208 Pfam PF12477 Sex factor F TraW protein N terminal 6 32 1.3E-5 T 29-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain CKQ55_RS30580 816807ba9a7af498966e529ead08349f 208 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 7 204 8.9E-69 T 29-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CKQ55_RS00820 0dc3e1b4eb3fc2f06770510617493554 39 ProDom PD078424 YCEQ 1 38 3.0E-14 T 29-03-2018 IPR020371 Uncharacterised protein family YceQ CKQ55_RS00820 0dc3e1b4eb3fc2f06770510617493554 39 Pfam PF10848 Protein of unknown function (DUF2655) 1 38 1.3E-22 T 29-03-2018 IPR020371 Uncharacterised protein family YceQ CKQ55_RS23900 2337d795df3212236d7b6564f2759e08 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 19.345 T 29-03-2018 IPR020907 PhoP/PhoQ regulator MgrB CKQ55_RS23900 2337d795df3212236d7b6564f2759e08 47 Pfam PF13998 MgrB protein 19 47 9.6E-18 T 29-03-2018 IPR020907 PhoP/PhoQ regulator MgrB CKQ55_RS22610 4fb933ec0f47658bc27ce348b4d23763 475 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 14 475 2.5E-156 T 29-03-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 CKQ55_RS22610 4fb933ec0f47658bc27ce348b4d23763 475 Gene3D G3DSA:3.40.50.20 142 237 2.0E-12 T 29-03-2018 CKQ55_RS22610 4fb933ec0f47658bc27ce348b4d23763 475 Pfam PF02397 Bacterial sugar transferase 279 469 1.8E-65 T 29-03-2018 IPR003362 Bacterial sugar transferase CKQ55_RS22610 4fb933ec0f47658bc27ce348b4d23763 475 Pfam PF13727 CoA-binding domain 83 196 1.6E-8 T 29-03-2018 CKQ55_RS22610 4fb933ec0f47658bc27ce348b4d23763 475 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 18 475 7.8E-120 T 29-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 1.7E-13 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.4E-38 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 SUPERFAMILY SSF46767 86 169 7.32E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 Gene3D G3DSA:1.10.10.10 85 170 6.1E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 167 38.685 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 Gene3D G3DSA:3.30.160.70 4 84 5.7E-6 T 29-03-2018 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 4.2E-35 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 SUPERFAMILY SSF53155 7 91 5.49E-7 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS25935 e0720006ae48b9efb0554d41c16f1161 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS14040 06d9dbaad0c954a504e92194328ec34f 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 36.429 T 29-03-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 CKQ55_RS14040 06d9dbaad0c954a504e92194328ec34f 331 Pfam PF01757 Acyltransferase family 5 320 6.8E-29 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CKQ55_RS12555 79d7dec72c7443807f17a019e259f3d6 305 Gene3D G3DSA:3.40.630.30 1 157 1.1E-24 T 29-03-2018 CKQ55_RS12555 79d7dec72c7443807f17a019e259f3d6 305 Pfam PF00583 Acetyltransferase (GNAT) family 43 130 4.7E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS12555 79d7dec72c7443807f17a019e259f3d6 305 SUPERFAMILY SSF55729 1 143 1.08E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 122 136 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 SUPERFAMILY SSF53807 14 456 2.55E-132 T 29-03-2018 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 Gene3D G3DSA:3.40.50.1980 187 285 3.4E-29 T 29-03-2018 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 4 456 9.7E-214 T 29-03-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0006461|GO:0009399 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 Gene3D G3DSA:3.40.50.1980 368 456 2.2E-17 T 29-03-2018 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 Gene3D G3DSA:3.40.50.1980 286 367 7.8E-23 T 29-03-2018 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 37 442 1.1E-104 T 29-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 Gene3D G3DSA:3.40.50.1980 24 177 2.3E-47 T 29-03-2018 CKQ55_RS22850 524f8f69a0c3454e00c03402c2fc8684 457 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 55 62 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 Pfam PF01595 Domain of unknown function DUF21 13 184 1.2E-49 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 Pfam PF00571 CBS domain 271 326 2.5E-5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 Pfam PF03471 Transporter associated domain 344 418 7.0E-19 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 Gene3D G3DSA:3.10.580.10 185 337 2.6E-20 T 29-03-2018 CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 SUPERFAMILY SSF56176 340 423 9.27E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 Gene3D G3DSA:3.30.465.10 338 428 5.2E-20 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 SUPERFAMILY SSF54631 192 329 1.64E-22 T 29-03-2018 CKQ55_RS19720 70373215493921c30f37d08b536213ea 429 SMART SM01091 342 420 2.8E-25 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 SMART SM00062 34 255 2.7E-73 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 Gene3D G3DSA:3.40.190.10 177 265 7.9E-13 T 29-03-2018 CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 7.2E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 SUPERFAMILY SSF53850 6 254 9.57E-73 T 29-03-2018 CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 SMART SM00079 34 254 7.5E-6 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS06770 41b435c17448243e08a9f8ba3f8e81f6 269 Gene3D G3DSA:3.40.190.10 23 176 3.7E-46 T 29-03-2018 CKQ55_RS10955 25055c2ca746f0d00d2c5706204ae107 366 Gene3D G3DSA:2.60.40.1090 24 172 0.34 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10955 25055c2ca746f0d00d2c5706204ae107 366 SUPERFAMILY SSF49401 334 366 8.95E-13 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS10955 25055c2ca746f0d00d2c5706204ae107 366 SUPERFAMILY SSF49401 207 295 8.95E-13 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS10955 25055c2ca746f0d00d2c5706204ae107 366 Pfam PF00419 Fimbrial protein 199 365 4.0E-10 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10955 25055c2ca746f0d00d2c5706204ae107 366 Gene3D G3DSA:2.60.40.1090 191 366 1.6E-22 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS29580 7738728ba264d3e9b604caff0c99bb55 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 2.8E-74 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CKQ55_RS29580 7738728ba264d3e9b604caff0c99bb55 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.327 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CKQ55_RS29580 7738728ba264d3e9b604caff0c99bb55 179 Pfam PF04279 Intracellular septation protein A 1 175 6.3E-72 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CKQ55_RS01040 d28af5c1ea5abd4a2f538018c1f7c234 426 Pfam PF04261 Dyp-type peroxidase family 64 412 4.6E-115 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CKQ55_RS01040 d28af5c1ea5abd4a2f538018c1f7c234 426 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 5 425 6.4E-179 T 29-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 CKQ55_RS01040 d28af5c1ea5abd4a2f538018c1f7c234 426 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 38 5.7E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CKQ55_RS01040 d28af5c1ea5abd4a2f538018c1f7c234 426 SUPERFAMILY SSF54909 57 419 3.04E-96 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS01040 d28af5c1ea5abd4a2f538018c1f7c234 426 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 64 412 5.7E-103 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CKQ55_RS18745 155f5f866faca38cd2f63d29a03f247d 372 SMART SM00257 112 156 1.8E-9 T 29-03-2018 IPR018392 LysM domain CKQ55_RS18745 155f5f866faca38cd2f63d29a03f247d 372 SUPERFAMILY SSF51261 112 369 7.32E-52 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS18745 155f5f866faca38cd2f63d29a03f247d 372 Gene3D G3DSA:3.10.350.10 101 241 9.1E-13 T 29-03-2018 CKQ55_RS18745 155f5f866faca38cd2f63d29a03f247d 372 Pfam PF01476 LysM domain 113 155 3.1E-9 T 29-03-2018 IPR018392 LysM domain CKQ55_RS18745 155f5f866faca38cd2f63d29a03f247d 372 Gene3D G3DSA:2.70.70.10 242 371 1.0E-37 T 29-03-2018 CKQ55_RS18745 155f5f866faca38cd2f63d29a03f247d 372 Pfam PF01551 Peptidase family M23 272 365 2.1E-31 T 29-03-2018 IPR016047 Peptidase M23 CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.4E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.4E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.4E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.4E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.4E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.4E-23 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 Gene3D G3DSA:3.40.50.720 1 253 3.3E-61 T 29-03-2018 CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 2.1E-4 T 29-03-2018 CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 SUPERFAMILY SSF51735 9 244 3.02E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29470 2ce3dc67f159050c2cd13957165a23ab 253 Pfam PF00106 short chain dehydrogenase 14 209 9.1E-54 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 SUPERFAMILY SSF46785 5 74 2.57E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 SMART SM00345 13 70 2.7E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 1.3E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 Gene3D G3DSA:3.40.1410.10 91 239 5.7E-26 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 SUPERFAMILY SSF64288 58 223 3.14E-33 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 SMART SM00866 90 229 3.3E-19 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 Pfam PF07702 UTRA domain 95 222 2.2E-23 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 7.3E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 7.3E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS26945 02d4e939bbc1ac587203e70a6be6a930 251 Gene3D G3DSA:1.10.10.10 3 72 8.3E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 SUPERFAMILY SSF48208 42 543 1.75E-171 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 ProSitePatterns PS00927 Trehalase signature 1. 153 166 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 336 353 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 270 287 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 379 395 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 304 321 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 195 213 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 5.1E-48 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 Gene3D G3DSA:1.50.10.10 35 543 4.4E-156 T 29-03-2018 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 Pfam PF01204 Trehalase 59 535 4.1E-168 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CKQ55_RS24145 638c1e932b63e5a09648222e669c854b 582 Hamap MF_01060 Periplasmic trehalase [treA]. 2 538 85.337 T 29-03-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 SUPERFAMILY SSF81935 88 261 1.12E-65 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Gene3D G3DSA:1.20.5.550 89 137 1.4E-15 T 29-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Gene3D G3DSA:3.20.20.220 178 610 2.2E-110 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 147 259 1.6E-46 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Pfam PF01619 Proline dehydrogenase 270 569 7.1E-100 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 SUPERFAMILY SSF51730 262 618 2.31E-123 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 SUPERFAMILY SSF47598 3 45 1.78E-10 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 PIRSF PIRSF000197 74 1320 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Gene3D G3DSA:3.40.309.10 902 1094 8.8E-45 T 29-03-2018 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1106 2.2E-111 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 SUPERFAMILY SSF53720 656 1112 2.62E-125 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Gene3D G3DSA:3.40.605.10 651 901 1.2E-71 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 Gene3D G3DSA:1.10.1220.10 2 49 8.7E-6 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS01075 baacf385a140873c1ed2c5d1d5570761 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1113 2.7E-272 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CKQ55_RS23930 8eda0ea53078549bbcfaeb9ad129af0a 264 SUPERFAMILY SSF53335 4 246 4.67E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS23930 8eda0ea53078549bbcfaeb9ad129af0a 264 Gene3D G3DSA:3.40.50.150 1 264 4.7E-58 T 29-03-2018 CKQ55_RS23930 8eda0ea53078549bbcfaeb9ad129af0a 264 Pfam PF08241 Methyltransferase domain 87 170 4.5E-13 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CKQ55_RS23930 8eda0ea53078549bbcfaeb9ad129af0a 264 PIRSF PIRSF018249 1 263 2.7E-88 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CKQ55_RS04295 6061c35a1d4397cc9b334c86c09de4b4 314 Pfam PF00294 pfkB family carbohydrate kinase 7 296 4.2E-46 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS04295 6061c35a1d4397cc9b334c86c09de4b4 314 Gene3D G3DSA:3.40.1190.20 4 313 8.5E-59 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS04295 6061c35a1d4397cc9b334c86c09de4b4 314 SUPERFAMILY SSF53613 4 308 1.06E-61 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 29-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 237 499 2.1E-91 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.275 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 Gene3D G3DSA:3.40.1190.20 228 500 4.6E-52 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 Pfam PF03853 YjeF-related protein N-terminus 40 199 3.6E-44 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 Gene3D G3DSA:3.40.50.10260 3 227 3.2E-64 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 PIRSF PIRSF017184 15 504 8.1E-163 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 499 23.814 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 18 219 1.1E-57 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 Pfam PF01256 Carbohydrate kinase 258 494 2.5E-77 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 SUPERFAMILY SSF64153 16 255 1.18E-62 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CKQ55_RS10545 d844575eebe409a54d00c64d56e4429a 508 SUPERFAMILY SSF53613 236 498 3.85E-76 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS12965 57c3d1459cac19b766ea52521cd33950 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 3.9E-92 T 29-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CKQ55_RS12965 57c3d1459cac19b766ea52521cd33950 319 SUPERFAMILY SSF161098 28 303 2.09E-32 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS12965 57c3d1459cac19b766ea52521cd33950 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 6.9E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS12965 57c3d1459cac19b766ea52521cd33950 319 Gene3D G3DSA:1.10.3720.10 12 306 9.2E-31 T 29-03-2018 CKQ55_RS29050 b93155c2bc56421c7c315e3735041740 335 Gene3D G3DSA:3.40.190.10 156 332 7.1E-17 T 29-03-2018 CKQ55_RS29050 b93155c2bc56421c7c315e3735041740 335 SUPERFAMILY SSF53850 36 271 2.79E-32 T 29-03-2018 CKQ55_RS29050 b93155c2bc56421c7c315e3735041740 335 Gene3D G3DSA:3.40.190.10 24 142 5.2E-11 T 29-03-2018 CKQ55_RS29050 b93155c2bc56421c7c315e3735041740 335 Pfam PF13379 NMT1-like family 28 268 1.9E-37 T 29-03-2018 CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 Pfam PF01026 TatD related DNase 4 255 9.7E-76 T 29-03-2018 IPR001130 TatD family GO:0016788 CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 1.9E-94 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 PIRSF PIRSF005902 1 259 4.3E-75 T 29-03-2018 IPR001130 TatD family GO:0016788 CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 Gene3D G3DSA:3.20.20.140 1 263 3.3E-82 T 29-03-2018 CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 SUPERFAMILY SSF51556 1 258 5.06E-88 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS00740 2e0c440a801de2488091a8d7ed94043b 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 Pfam PF07696 7TMR-DISM extracellular 2 48 181 1.5E-15 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 Gene3D G3DSA:1.10.287.130 412 486 3.2E-8 T 29-03-2018 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 648 1.7E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 604 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 590 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 SUPERFAMILY SSF47384 415 490 3.14E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 SMART SM00387 540 650 9.3E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 Gene3D G3DSA:3.30.565.10 522 656 2.7E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 SUPERFAMILY SSF55874 485 648 9.82E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 Pfam PF00512 His Kinase A (phospho-acceptor) domain 426 488 1.1E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS22535 07dd199f78cc9135c9a99b79f37bad87 656 SMART SM00388 425 490 5.9E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS10460 3e533c4be438d7edfbc9396ef97fbb83 109 SUPERFAMILY SSF159871 10 108 4.45E-21 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS10460 3e533c4be438d7edfbc9396ef97fbb83 109 Gene3D G3DSA:3.30.1660.10 41 108 8.3E-20 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS10460 3e533c4be438d7edfbc9396ef97fbb83 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 3.2E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 540 573 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 Pfam PF00263 Bacterial type II and III secretion system protein 430 595 8.5E-51 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 33 602 2.7E-165 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 PRINTS PR00811 Bacterial general secretion pathway protein D signature 461 471 1.2E-42 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 577 1.2E-42 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 PRINTS PR00811 Bacterial general secretion pathway protein D signature 582 596 1.2E-42 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 PRINTS PR00811 Bacterial general secretion pathway protein D signature 346 356 1.2E-42 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 PRINTS PR00811 Bacterial general secretion pathway protein D signature 426 450 1.2E-42 T 29-03-2018 IPR001775 GspD/PilQ family CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 Pfam PF03958 Bacterial type II/III secretion system short domain 269 346 2.8E-18 T 29-03-2018 IPR005644 NolW-like CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 Pfam PF03958 Bacterial type II/III secretion system short domain 130 190 4.7E-9 T 29-03-2018 IPR005644 NolW-like CKQ55_RS04840 71cf33912f95ee8d08e8984631b5769d 659 Pfam PF03958 Bacterial type II/III secretion system short domain 194 263 9.5E-14 T 29-03-2018 IPR005644 NolW-like CKQ55_RS16290 80a8f0ca8378c3ac2104386e4aa74165 256 Gene3D G3DSA:3.20.20.60 4 255 5.5E-44 T 29-03-2018 CKQ55_RS16290 80a8f0ca8378c3ac2104386e4aa74165 256 SUPERFAMILY SSF51621 4 255 7.22E-83 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS16290 80a8f0ca8378c3ac2104386e4aa74165 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 1.8E-145 T 29-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 CKQ55_RS16290 80a8f0ca8378c3ac2104386e4aa74165 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 69.179 T 29-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 CKQ55_RS16290 80a8f0ca8378c3ac2104386e4aa74165 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 2.3E-62 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CKQ55_RS29405 942e0cabcb7595510eeee4e470fe510c 108 PIRSF PIRSF037511 1 108 1.2E-35 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CKQ55_RS29405 942e0cabcb7595510eeee4e470fe510c 108 Pfam PF01253 Translation initiation factor SUI1 32 101 2.1E-17 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CKQ55_RS29405 942e0cabcb7595510eeee4e470fe510c 108 SUPERFAMILY SSF55159 5 104 7.46E-25 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CKQ55_RS29405 942e0cabcb7595510eeee4e470fe510c 108 Gene3D G3DSA:3.30.780.10 16 106 7.3E-20 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CKQ55_RS29405 942e0cabcb7595510eeee4e470fe510c 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 2.9E-39 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CKQ55_RS16900 c0243b124d60e7922703da5217945791 219 Pfam PF09335 SNARE associated Golgi protein 48 173 1.6E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS25000 2970459ab13eba5b1ce8c3ce17ba6619 334 Pfam PF01032 FecCD transport family 18 326 1.2E-88 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS25000 2970459ab13eba5b1ce8c3ce17ba6619 334 Gene3D G3DSA:1.10.3470.10 1 334 8.8E-73 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS25000 2970459ab13eba5b1ce8c3ce17ba6619 334 SUPERFAMILY SSF81345 3 326 6.02E-76 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS20980 4ebf64d33a36eceab89ac5fa930799d3 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 4.3E-13 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS20980 4ebf64d33a36eceab89ac5fa930799d3 238 Gene3D G3DSA:1.10.3720.10 6 233 4.3E-31 T 29-03-2018 CKQ55_RS20980 4ebf64d33a36eceab89ac5fa930799d3 238 SUPERFAMILY SSF161098 17 223 7.33E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20980 4ebf64d33a36eceab89ac5fa930799d3 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 1.2E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 SUPERFAMILY SSF56672 1 238 2.49E-65 T 29-03-2018 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Pfam PF13438 Domain of unknown function (DUF4113) 372 420 2.3E-19 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Gene3D G3DSA:3.30.70.270 113 173 8.6E-7 T 29-03-2018 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Gene3D G3DSA:3.30.70.270 37 112 1.0E-15 T 29-03-2018 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Gene3D G3DSA:1.10.150.20 174 247 5.7E-17 T 29-03-2018 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 355 5.5E-18 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 SUPERFAMILY SSF100879 246 341 1.02E-6 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Pfam PF00817 impB/mucB/samB family 6 149 4.1E-33 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30270 8432da75abd3711796d7b1907fe37f52 424 Gene3D G3DSA:3.30.1490.100 248 363 2.9E-26 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 Gene3D G3DSA:1.10.10.60 1 20 0.0012 T 29-03-2018 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 SUPERFAMILY SSF53822 63 320 4.32E-52 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 318 8.0E-24 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 Gene3D G3DSA:3.40.50.2300 176 314 3.5E-31 T 29-03-2018 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 5.8E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 Gene3D G3DSA:1.10.260.40 21 62 2.7E-15 T 29-03-2018 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 Gene3D G3DSA:3.40.50.2300 63 175 8.1E-25 T 29-03-2018 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 SMART SM00354 5 75 4.8E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS06585 879d20288273364c58246a3f0bf15837 330 SUPERFAMILY SSF47413 4 63 4.66E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS26460 abdca815578b36f74396919fbb242f87 268 SUPERFAMILY SSF54506 3 261 3.84E-76 T 29-03-2018 CKQ55_RS26460 abdca815578b36f74396919fbb242f87 268 Gene3D G3DSA:3.10.310.10 1 123 3.7E-31 T 29-03-2018 CKQ55_RS26460 abdca815578b36f74396919fbb242f87 268 PIRSF PIRSF016184 1 261 7.6E-54 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CKQ55_RS26460 abdca815578b36f74396919fbb242f87 268 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 257 4.5E-31 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CKQ55_RS26460 abdca815578b36f74396919fbb242f87 268 Pfam PF02567 Phenazine biosynthesis-like protein 9 257 7.1E-54 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CKQ55_RS26460 abdca815578b36f74396919fbb242f87 268 Gene3D G3DSA:3.10.310.10 124 249 4.2E-30 T 29-03-2018 CKQ55_RS28260 4d6cffc151737eb75fc9a97dbb18f8ae 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 452 3.4E-107 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CKQ55_RS28260 4d6cffc151737eb75fc9a97dbb18f8ae 459 Pfam PF02321 Outer membrane efflux protein 265 450 7.2E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS28260 4d6cffc151737eb75fc9a97dbb18f8ae 459 Pfam PF02321 Outer membrane efflux protein 60 244 5.5E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS28260 4d6cffc151737eb75fc9a97dbb18f8ae 459 SUPERFAMILY SSF56954 2 454 3.4E-100 T 29-03-2018 CKQ55_RS28260 4d6cffc151737eb75fc9a97dbb18f8ae 459 Gene3D G3DSA:1.20.1600.10 17 458 9.9E-91 T 29-03-2018 CKQ55_RS27020 d3fc942faa6daa440361b0ad3248dc68 352 SUPERFAMILY SSF51004 40 335 1.07E-31 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CKQ55_RS27020 d3fc942faa6daa440361b0ad3248dc68 352 Gene3D G3DSA:2.130.10.10 32 342 7.0E-35 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS28805 ab21253d36a82b3546274335d64e93cc 114 PIRSF PIRSF002599 19 111 4.8E-14 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS28805 ab21253d36a82b3546274335d64e93cc 114 Pfam PF06961 Protein of unknown function (DUF1294) 33 87 2.0E-23 T 29-03-2018 IPR010718 Protein of unknown function DUF1294 CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.3E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.3E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.3E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.3E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.3E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.3E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 1.2E-5 T 29-03-2018 CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 SUPERFAMILY SSF51735 6 243 6.67E-84 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 9.6E-68 T 29-03-2018 CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 Gene3D G3DSA:3.40.50.720 1 43 1.7E-11 T 29-03-2018 CKQ55_RS17690 c10f6fd0aaeecea870cb9c067254169a 244 Gene3D G3DSA:3.40.50.720 44 244 1.4E-66 T 29-03-2018 CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 Gene3D G3DSA:3.40.640.10 1 247 7.4E-55 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 1.2E-209 T 29-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 2.8E-140 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 SUPERFAMILY SSF53383 5 381 3.99E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 Gene3D G3DSA:3.90.1150.10 248 386 4.9E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 PIRSF PIRSF001434 1 384 9.1E-131 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS12265 2e640e840c1b18b553b1f3a85506a387 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS11355 27a3d6e95c4e7b12b6453b2a8275d9f8 229 Pfam PF03575 Peptidase family S51 3 205 1.5E-60 T 29-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CKQ55_RS11355 27a3d6e95c4e7b12b6453b2a8275d9f8 229 Gene3D G3DSA:3.40.50.880 1 229 2.0E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS11355 27a3d6e95c4e7b12b6453b2a8275d9f8 229 SUPERFAMILY SSF52317 1 222 1.74E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS11355 27a3d6e95c4e7b12b6453b2a8275d9f8 229 Hamap MF_00510 Peptidase E [pepE]. 1 215 48.378 T 29-03-2018 IPR023172 Peptidase S51, dipeptidase E GO:0016805 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 SUPERFAMILY SSF51905 2 175 5.8E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 SUPERFAMILY SSF51905 265 380 5.8E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 Gene3D G3DSA:3.50.50.60 2 352 7.9E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.1E-142 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 Pfam PF01494 FAD binding domain 2 343 8.9E-24 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 2.2E-134 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 9.9E-14 T 29-03-2018 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 9.9E-14 T 29-03-2018 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 9.9E-14 T 29-03-2018 CKQ55_RS17345 0fbf025807a6bfe00da442ffd8d625d3 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.9E-14 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 Gene3D G3DSA:3.90.700.10 264 339 1.1E-30 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 Pfam PF00890 FAD binding domain 10 392 7.7E-102 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 520 1.9E-228 T 29-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 SUPERFAMILY SSF56425 238 353 1.94E-40 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 Gene3D G3DSA:3.50.50.60 340 410 5.2E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 Gene3D G3DSA:3.50.50.60 1 263 3.9E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 SUPERFAMILY SSF51905 356 445 1.18E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 SUPERFAMILY SSF51905 4 255 1.18E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 1.6E-13 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 3.9E-5 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.9E-5 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 Gene3D G3DSA:1.20.58.100 425 535 1.6E-27 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 5.1E-11 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.1E-11 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 SUPERFAMILY SSF46977 426 525 2.88E-31 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 PIRSF PIRSF000171 1 254 1.5E-20 T 29-03-2018 CKQ55_RS19915 290aa8de2fecc7bef004a296a7766132 539 PIRSF PIRSF000171 339 530 2.4E-14 T 29-03-2018 CKQ55_RS21450 4a591e11bc1a7dbe1d167e73b05b9708 544 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 24 514 52.791 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CKQ55_RS21450 4a591e11bc1a7dbe1d167e73b05b9708 544 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 28 512 1.2E-208 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CKQ55_RS21450 4a591e11bc1a7dbe1d167e73b05b9708 544 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 514 3.7E-232 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CKQ55_RS21450 4a591e11bc1a7dbe1d167e73b05b9708 544 Gene3D G3DSA:3.50.50.60 20 478 6.4E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS21450 4a591e11bc1a7dbe1d167e73b05b9708 544 SUPERFAMILY SSF51905 26 295 3.45E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 SUPERFAMILY SSF52402 210 482 6.41E-76 T 29-03-2018 CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 SUPERFAMILY SSF56235 1 196 8.06E-57 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 Pfam PF00733 Asparagine synthase 211 366 1.5E-59 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 Pfam PF13537 Glutamine amidotransferase domain 48 165 1.1E-41 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 Gene3D G3DSA:3.40.50.620 194 514 7.9E-92 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 Gene3D G3DSA:3.60.20.10 2 193 6.9E-48 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.6E-124 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 PIRSF PIRSF001589 363 508 1.8E-28 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CKQ55_RS03995 207d21ec16df82b95cd9c1846efd2caf 553 PIRSF PIRSF001589 1 366 1.8E-111 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CKQ55_RS29260 7118a96aac49a1f92cfeb6ec05ee7785 538 PIRSF PIRSF002741 4 538 4.5E-111 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS29260 7118a96aac49a1f92cfeb6ec05ee7785 538 SUPERFAMILY SSF53850 33 527 3.17E-138 T 29-03-2018 CKQ55_RS29260 7118a96aac49a1f92cfeb6ec05ee7785 538 Gene3D G3DSA:3.10.105.10 302 507 1.4E-58 T 29-03-2018 CKQ55_RS29260 7118a96aac49a1f92cfeb6ec05ee7785 538 Gene3D G3DSA:3.40.190.10 205 301 2.1E-22 T 29-03-2018 CKQ55_RS29260 7118a96aac49a1f92cfeb6ec05ee7785 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 454 2.6E-86 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS29260 7118a96aac49a1f92cfeb6ec05ee7785 538 Gene3D G3DSA:3.90.76.10 45 204 3.3E-40 T 29-03-2018 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 PIRSF PIRSF001373 1 520 2.0E-247 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 SUPERFAMILY SSF56322 9 515 1.7E-164 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 Gene3D G3DSA:3.60.120.10 1 520 2.9E-160 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 5.1E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 5.1E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 5.1E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 5.1E-24 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 Pfam PF00425 chorismate binding enzyme 242 502 5.4E-84 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 9.8E-258 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS29510 5d732ef04aef862bafa269da85c0ea7f 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 2.4E-13 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS09615 1559ccf21127591a2ac8d608d7151f7a 101 Gene3D G3DSA:1.10.260.40 1 82 2.3E-10 T 29-03-2018 CKQ55_RS09615 1559ccf21127591a2ac8d608d7151f7a 101 SMART SM00530 12 67 5.6E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS09615 1559ccf21127591a2ac8d608d7151f7a 101 Pfam PF01381 Helix-turn-helix 27 66 2.6E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS09615 1559ccf21127591a2ac8d608d7151f7a 101 SUPERFAMILY SSF47413 8 87 9.46E-22 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS09615 1559ccf21127591a2ac8d608d7151f7a 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 81 8.5E-23 T 29-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 4.4E-12 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 SUPERFAMILY SSF47413 2 57 2.97E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 Gene3D G3DSA:3.40.50.2300 176 319 6.0E-27 T 29-03-2018 CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 SUPERFAMILY SSF53822 61 317 5.1E-42 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 SMART SM00354 1 70 2.1E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 Gene3D G3DSA:1.10.260.40 1 56 9.6E-20 T 29-03-2018 CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 312 5.1E-54 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS12530 3b3351cfd3a41866c50a3ce42ee48f20 331 Gene3D G3DSA:3.40.50.2300 57 175 6.3E-25 T 29-03-2018 CKQ55_RS28840 4cd0e8adf28b4ccd4e436b949a56bf8e 177 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 7.7E-68 T 29-03-2018 IPR024409 Protein of unknown function DUF3833 CKQ55_RS04980 279b122a311fe338beeeec2958271b65 383 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 269 6.6E-6 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS04980 279b122a311fe338beeeec2958271b65 383 SUPERFAMILY SSF51735 2 153 1.2E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04980 279b122a311fe338beeeec2958271b65 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 119 7.9E-26 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS04980 279b122a311fe338beeeec2958271b65 383 SUPERFAMILY SSF55347 128 327 1.55E-32 T 29-03-2018 CKQ55_RS04980 279b122a311fe338beeeec2958271b65 383 Gene3D G3DSA:3.40.50.720 1 142 6.8E-39 T 29-03-2018 CKQ55_RS04980 279b122a311fe338beeeec2958271b65 383 Gene3D G3DSA:3.30.360.10 143 383 3.9E-41 T 29-03-2018 CKQ55_RS10130 543cb9020a92ba1cd522c77361a4084b 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.2E-51 T 29-03-2018 CKQ55_RS10130 543cb9020a92ba1cd522c77361a4084b 154 Gene3D G3DSA:3.20.20.70 12 129 5.5E-12 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS10130 543cb9020a92ba1cd522c77361a4084b 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 3.6E-65 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CKQ55_RS10130 543cb9020a92ba1cd522c77361a4084b 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CKQ55_RS10130 543cb9020a92ba1cd522c77361a4084b 154 SUPERFAMILY SSF102114 16 117 6.8E-8 T 29-03-2018 CKQ55_RS10130 543cb9020a92ba1cd522c77361a4084b 154 PIRSF PIRSF000368 1 154 5.8E-61 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CKQ55_RS11760 38472d1f4fe19185dcd47e1254b0c4f5 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS11760 38472d1f4fe19185dcd47e1254b0c4f5 253 Gene3D G3DSA:3.40.50.1580 3 253 6.0E-56 T 29-03-2018 CKQ55_RS11760 38472d1f4fe19185dcd47e1254b0c4f5 253 SUPERFAMILY SSF53167 6 250 1.7E-72 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS11760 38472d1f4fe19185dcd47e1254b0c4f5 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 2.1E-130 T 29-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CKQ55_RS11760 38472d1f4fe19185dcd47e1254b0c4f5 253 Pfam PF01048 Phosphorylase superfamily 21 245 6.6E-40 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS07710 adee231cff201dd88c3d98fa2c8b8b17 265 Pfam PF00005 ABC transporter 27 176 3.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS07710 adee231cff201dd88c3d98fa2c8b8b17 265 Gene3D G3DSA:3.40.50.300 2 245 3.0E-62 T 29-03-2018 CKQ55_RS07710 adee231cff201dd88c3d98fa2c8b8b17 265 SMART SM00382 36 224 4.4E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS07710 adee231cff201dd88c3d98fa2c8b8b17 265 SUPERFAMILY SSF52540 12 239 3.0E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07710 adee231cff201dd88c3d98fa2c8b8b17 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS12855 f868e2a3da2474a14523df23f31d92a5 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.1E-47 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CKQ55_RS12855 f868e2a3da2474a14523df23f31d92a5 139 SUPERFAMILY SSF102546 1 139 1.96E-44 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CKQ55_RS12855 f868e2a3da2474a14523df23f31d92a5 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.121 T 29-03-2018 IPR023064 D-ribose pyranase GO:0016872 CKQ55_RS12855 f868e2a3da2474a14523df23f31d92a5 139 Gene3D G3DSA:3.40.1650.10 1 139 2.1E-39 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 Gene3D G3DSA:3.10.150.10 248 366 1.2E-24 T 29-03-2018 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.9E-40 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 Gene3D G3DSA:3.10.150.10 1 123 2.8E-27 T 29-03-2018 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 SUPERFAMILY SSF55979 245 366 3.62E-37 T 29-03-2018 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.1E-40 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-113 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 SUPERFAMILY SSF55979 1 121 1.82E-25 T 29-03-2018 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 Gene3D G3DSA:3.10.150.10 124 247 5.9E-34 T 29-03-2018 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.4E-44 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 PIRSF PIRSF000804 1 366 2.2E-117 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 SMART SM00480 17 362 2.0E-172 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS13075 5afa7da7e939088c87b07a306b988092 366 SUPERFAMILY SSF55979 125 244 1.26E-30 T 29-03-2018 CKQ55_RS24185 847e30148282e7064479b7c98d18f595 250 SUPERFAMILY SSF56235 2 238 6.31E-32 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS24185 847e30148282e7064479b7c98d18f595 250 Pfam PF00227 Proteasome subunit 4 185 2.4E-7 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CKQ55_RS24185 847e30148282e7064479b7c98d18f595 250 PIRSF PIRSF009120 1 249 1.7E-110 T 29-03-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 CKQ55_RS24185 847e30148282e7064479b7c98d18f595 250 Gene3D G3DSA:3.60.20.10 2 229 1.2E-35 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS20485 b279d1606a24454fb1b7109106244a2e 96 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 5.0E-18 T 29-03-2018 CKQ55_RS20485 b279d1606a24454fb1b7109106244a2e 96 SMART SM00877 2 78 2.2E-35 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20485 b279d1606a24454fb1b7109106244a2e 96 Pfam PF00936 BMC domain 3 78 1.6E-27 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20485 b279d1606a24454fb1b7109106244a2e 96 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS20485 b279d1606a24454fb1b7109106244a2e 96 SUPERFAMILY SSF143414 1 89 2.09E-31 T 29-03-2018 CKQ55_RS09885 e08febbc67d404e2b115eb5f27132a9e 423 Gene3D G3DSA:1.10.150.130 87 201 8.9E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS09885 e08febbc67d404e2b115eb5f27132a9e 423 Gene3D G3DSA:1.10.443.10 202 395 1.1E-20 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS09885 e08febbc67d404e2b115eb5f27132a9e 423 SUPERFAMILY SSF56349 97 387 1.41E-48 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS09885 e08febbc67d404e2b115eb5f27132a9e 423 Pfam PF00589 Phage integrase family 209 383 6.3E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS09885 e08febbc67d404e2b115eb5f27132a9e 423 Pfam PF13356 Arm DNA-binding domain 3 87 1.5E-21 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CKQ55_RS23585 9a73636c812a40b53cc34478647214e4 267 Pfam PF02358 Trehalose-phosphatase 18 227 5.3E-53 T 29-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CKQ55_RS23585 9a73636c812a40b53cc34478647214e4 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 17 210 2.7E-20 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS23585 9a73636c812a40b53cc34478647214e4 267 Gene3D G3DSA:3.40.50.1000 15 259 5.6E-25 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS23585 9a73636c812a40b53cc34478647214e4 267 SUPERFAMILY SSF56784 16 244 5.61E-43 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS23585 9a73636c812a40b53cc34478647214e4 267 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 16 243 9.5E-67 T 29-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CKQ55_RS04585 e52d2b721da3dac31b692361deaf052f 231 Gene3D G3DSA:3.40.630.30 18 205 2.4E-22 T 29-03-2018 CKQ55_RS04585 e52d2b721da3dac31b692361deaf052f 231 Pfam PF13302 Acetyltransferase (GNAT) domain 36 173 4.2E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS04585 e52d2b721da3dac31b692361deaf052f 231 SUPERFAMILY SSF55729 28 197 4.77E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 SUPERFAMILY SSF53474 10 254 2.34E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 4.6E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 4.6E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 4.6E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 4.6E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 2 258 5.7E-104 T 29-03-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 2 259 51.037 T 29-03-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 Gene3D G3DSA:3.40.50.1820 1 264 2.7E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS01105 90b8557ecd5db0db383156af5414e93d 267 Pfam PF00561 alpha/beta hydrolase fold 15 118 1.4E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS28865 3f5ec8c6f27cb65e549aacbdad9b9da4 401 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 1 397 23.386 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CKQ55_RS28865 3f5ec8c6f27cb65e549aacbdad9b9da4 401 Pfam PF03616 Sodium/glutamate symporter 2 366 6.3E-164 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CKQ55_RS28865 3f5ec8c6f27cb65e549aacbdad9b9da4 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 396 1.6E-155 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CKQ55_RS31765 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:2.60.40.1250 26 154 5.8E-34 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS31765 c0e6ca88115aa66847162269bf52e5a2 343 Pfam PF11412 Disulphide bond corrector protein DsbC 32 145 1.8E-30 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS31765 c0e6ca88115aa66847162269bf52e5a2 343 SUPERFAMILY SSF74863 32 145 1.57E-31 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS31765 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 155 343 4.0E-42 T 29-03-2018 CKQ55_RS31415 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:2.60.40.1250 26 154 5.8E-34 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS31415 c0e6ca88115aa66847162269bf52e5a2 343 Pfam PF11412 Disulphide bond corrector protein DsbC 32 145 1.8E-30 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS31415 c0e6ca88115aa66847162269bf52e5a2 343 SUPERFAMILY SSF74863 32 145 1.57E-31 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CKQ55_RS31415 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 155 343 4.0E-42 T 29-03-2018 CKQ55_RS00410 79a6264315277c2045b0bd809b9dd7fa 76 Pfam PF01381 Helix-turn-helix 8 61 4.8E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00410 79a6264315277c2045b0bd809b9dd7fa 76 SMART SM00530 7 61 2.1E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00410 79a6264315277c2045b0bd809b9dd7fa 76 Gene3D G3DSA:1.10.260.40 1 71 3.7E-17 T 29-03-2018 CKQ55_RS00410 79a6264315277c2045b0bd809b9dd7fa 76 SUPERFAMILY SSF47413 4 64 9.12E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS00040 79a6264315277c2045b0bd809b9dd7fa 76 Pfam PF01381 Helix-turn-helix 8 61 4.8E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00040 79a6264315277c2045b0bd809b9dd7fa 76 SMART SM00530 7 61 2.1E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS00040 79a6264315277c2045b0bd809b9dd7fa 76 Gene3D G3DSA:1.10.260.40 1 71 3.7E-17 T 29-03-2018 CKQ55_RS00040 79a6264315277c2045b0bd809b9dd7fa 76 SUPERFAMILY SSF47413 4 64 9.12E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS11015 a5c217037ce81afc47c61d730335ffda 222 SUPERFAMILY SSF47616 82 211 1.08E-22 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS11015 a5c217037ce81afc47c61d730335ffda 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 142 205 2.8E-9 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS11015 a5c217037ce81afc47c61d730335ffda 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 7.9E-18 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS11015 a5c217037ce81afc47c61d730335ffda 222 SUPERFAMILY SSF52833 1 84 5.18E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS11015 a5c217037ce81afc47c61d730335ffda 222 Gene3D G3DSA:1.20.1050.10 98 217 7.0E-25 T 29-03-2018 CKQ55_RS11015 a5c217037ce81afc47c61d730335ffda 222 Gene3D G3DSA:3.40.30.10 1 97 2.0E-26 T 29-03-2018 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.921 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 Gene3D G3DSA:3.40.50.720 141 264 1.8E-38 T 29-03-2018 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.1E-87 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.2E-40 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 Gene3D G3DSA:3.40.50.10860 11 140 4.0E-50 T 29-03-2018 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.7E-68 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 SUPERFAMILY SSF51735 123 285 2.84E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 SUPERFAMILY SSF53223 3 122 5.95E-41 T 29-03-2018 CKQ55_RS05715 f27b13ae7d99e4f4c701ad68c9b546c8 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Pfam PF17203 Single cache domain 3 54 179 1.7E-19 T 29-03-2018 IPR033463 Single cache domain 3 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 SUPERFAMILY SSF55890 332 397 1.16E-13 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Gene3D G3DSA:3.30.450.20 42 182 4.8E-24 T 29-03-2018 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 SUPERFAMILY SSF55785 219 317 1.28E-7 T 29-03-2018 IPR000014 PAS domain CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Gene3D G3DSA:3.30.565.10 377 533 1.7E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 371 1.5E-10 T 29-03-2018 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 SMART SM00387 424 532 1.2E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 2.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 2.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 2.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 2.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 529 4.9E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 SUPERFAMILY SSF103190 49 178 1.52E-36 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Gene3D G3DSA:3.30.450.20 213 324 1.0E-11 T 29-03-2018 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Pfam PF00989 PAS fold 224 256 2.3E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 SUPERFAMILY SSF55874 418 529 5.24E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS26025 cf7bc61dc3d86fc1907211c5c58aaded 537 Gene3D G3DSA:1.10.287.130 325 376 6.4E-15 T 29-03-2018 CKQ55_RS28610 0d05304f58fa3086dac4410a5adee5bb 146 Pfam PF03724 META domain 28 138 1.1E-21 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CKQ55_RS31835 c53cc222c8152c189566e4f177c8feaa 337 Gene3D G3DSA:1.10.10.10 210 316 3.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31835 c53cc222c8152c189566e4f177c8feaa 337 Gene3D G3DSA:1.10.10.10 51 209 2.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31835 c53cc222c8152c189566e4f177c8feaa 337 SUPERFAMILY SSF46785 59 195 3.21E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31835 c53cc222c8152c189566e4f177c8feaa 337 SUPERFAMILY SSF46785 197 310 2.45E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31835 c53cc222c8152c189566e4f177c8feaa 337 Pfam PF01051 Initiator Replication protein 61 307 2.8E-23 T 29-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CKQ55_RS03400 db4134aadc17ef84bf6f4ceeee72951c 184 Pfam PF00196 Bacterial regulatory proteins, luxR family 116 167 8.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS03400 db4134aadc17ef84bf6f4ceeee72951c 184 SMART SM00421 114 171 1.3E-4 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS03400 db4134aadc17ef84bf6f4ceeee72951c 184 Gene3D G3DSA:1.10.10.10 16 169 9.4E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03400 db4134aadc17ef84bf6f4ceeee72951c 184 SUPERFAMILY SSF46894 114 170 1.26E-9 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS17210 83f3410e4d4a031417b13cb229da8ca7 252 Gene3D G3DSA:3.30.2010.10 36 147 2.5E-20 T 29-03-2018 CKQ55_RS17210 83f3410e4d4a031417b13cb229da8ca7 252 Pfam PF01435 Peptidase family M48 72 245 3.1E-25 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CKQ55_RS27415 e11d397fafeba0a97c6e340f56d57958 311 Gene3D G3DSA:3.40.190.10 41 134 0.0033 T 29-03-2018 CKQ55_RS27415 e11d397fafeba0a97c6e340f56d57958 311 SUPERFAMILY SSF53850 26 303 2.39E-49 T 29-03-2018 CKQ55_RS27415 e11d397fafeba0a97c6e340f56d57958 311 Gene3D G3DSA:3.40.190.10 135 309 3.6E-24 T 29-03-2018 CKQ55_RS27415 e11d397fafeba0a97c6e340f56d57958 311 Pfam PF09084 NMT1/THI5 like 34 244 2.5E-68 T 29-03-2018 IPR015168 SsuA/THI5-like CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 Gene3D G3DSA:1.10.40.30 376 433 2.3E-26 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 3.4E-68 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 3.4E-68 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 3.4E-68 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 3.4E-68 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 3.4E-68 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 3.4E-68 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 Gene3D G3DSA:1.10.275.10 2 107 1.1E-31 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.3E-24 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 Gene3D G3DSA:1.20.200.10 108 375 1.7E-95 T 29-03-2018 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 Pfam PF00206 Lyase 6 301 3.1E-99 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 29-03-2018 IPR000362 Fumarate lyase family CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 SUPERFAMILY SSF48557 3 456 8.33E-142 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.2E-213 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS12195 b54fcbc7f56856209301d95774b039cd 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.477 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CKQ55_RS14690 34e42f615a826fc86ef75fc710d7cb0c 353 Pfam PF00891 O-methyltransferase 178 332 8.6E-17 T 29-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 CKQ55_RS14690 34e42f615a826fc86ef75fc710d7cb0c 353 Gene3D G3DSA:3.40.50.150 97 353 7.3E-31 T 29-03-2018 CKQ55_RS14690 34e42f615a826fc86ef75fc710d7cb0c 353 Gene3D G3DSA:1.10.10.10 12 96 1.5E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14690 34e42f615a826fc86ef75fc710d7cb0c 353 SUPERFAMILY SSF53335 96 339 3.1E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 Gene3D G3DSA:1.10.10.60 2 59 9.4E-15 T 29-03-2018 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 SUPERFAMILY SSF46689 6 56 1.7E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 Gene3D G3DSA:1.10.10.60 60 113 5.0E-14 T 29-03-2018 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 Pfam PF12833 Helix-turn-helix domain 28 106 4.0E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 SUPERFAMILY SSF46689 59 108 1.54E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS04745 7686d15d37a65efa374a87da87ae492d 113 SMART SM00342 22 105 1.6E-34 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS10235 95f5bc942fcec8afc829c4f58f113338 181 SUPERFAMILY SSF55729 12 126 1.3E-15 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS10235 95f5bc942fcec8afc829c4f58f113338 181 Pfam PF13673 Acetyltransferase (GNAT) domain 29 126 2.8E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS10235 95f5bc942fcec8afc829c4f58f113338 181 Gene3D G3DSA:3.40.630.30 2 171 1.0E-18 T 29-03-2018 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 Gene3D G3DSA:3.40.50.300 165 228 1.8E-11 T 29-03-2018 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 SUPERFAMILY SSF54980 365 421 7.05E-14 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 PIRSF PIRSF006809 3 420 7.2E-150 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.5E-29 T 29-03-2018 IPR032305 GTP-binding protein, middle domain CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.937 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 2.7E-154 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 Gene3D G3DSA:3.40.50.300 229 376 2.5E-15 T 29-03-2018 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 7.4E-31 T 29-03-2018 IPR025121 GTPase HflX, N-terminal CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.6E-20 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS10515 2f507d00f26572170c77b48eb16ce697 426 SUPERFAMILY SSF52540 197 373 4.51E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 SUPERFAMILY SSF47323 316 460 1.44E-43 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 Pfam PF09190 DALR domain 341 402 2.3E-25 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 SUPERFAMILY SSF52374 1 313 5.12E-105 T 29-03-2018 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 Gene3D G3DSA:3.40.50.620 1 305 9.8E-93 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 4.4E-200 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.7E-145 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.693 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 Gene3D G3DSA:1.20.120.640 306 394 1.9E-22 T 29-03-2018 CKQ55_RS05725 9419632a53ae0392cc6cd40f157dd4e7 461 SMART SM00840 341 402 8.9E-28 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CKQ55_RS13320 535e02dcd9cab4d9d3171f8831b85017 441 Pfam PF02378 Phosphotransferase system, EIIC 33 352 1.4E-51 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS13320 535e02dcd9cab4d9d3171f8831b85017 441 PIRSF PIRSF006351 5 434 1.5E-135 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS13320 535e02dcd9cab4d9d3171f8831b85017 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 2.3E-111 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 Gene3D G3DSA:3.10.129.10 162 316 1.6E-18 T 29-03-2018 CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 SUPERFAMILY SSF54637 171 313 8.29E-39 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 SUPERFAMILY SSF55729 15 162 3.88E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 Gene3D G3DSA:3.40.630.30 15 161 1.3E-23 T 29-03-2018 CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 Pfam PF00583 Acetyltransferase (GNAT) family 44 138 4.9E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 3.5E-48 T 29-03-2018 IPR012660 Thioesterase, putative CKQ55_RS12690 a1b3e0d7540d17713194e577c1dab508 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 9.8E-49 T 29-03-2018 IPR012660 Thioesterase, putative CKQ55_RS05125 2471640bba8eb367799a64a17bac91c8 325 SUPERFAMILY SSF51735 19 165 1.68E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05125 2471640bba8eb367799a64a17bac91c8 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 20 136 6.1E-25 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS05125 2471640bba8eb367799a64a17bac91c8 325 Gene3D G3DSA:3.30.360.10 151 323 1.1E-24 T 29-03-2018 CKQ55_RS05125 2471640bba8eb367799a64a17bac91c8 325 Gene3D G3DSA:3.40.50.720 13 150 9.5E-37 T 29-03-2018 CKQ55_RS05125 2471640bba8eb367799a64a17bac91c8 325 SUPERFAMILY SSF55347 145 306 2.13E-29 T 29-03-2018 CKQ55_RS01885 3fe0060662345d72f5e923cfbfa5f2eb 711 Pfam PF13515 Fusaric acid resistance protein-like 406 525 1.2E-24 T 29-03-2018 CKQ55_RS01885 3fe0060662345d72f5e923cfbfa5f2eb 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CKQ55_RS01885 3fe0060662345d72f5e923cfbfa5f2eb 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 705 0.0 T 29-03-2018 IPR010019 Integral membrane protein, YccS CKQ55_RS01885 3fe0060662345d72f5e923cfbfa5f2eb 711 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 7.2E-108 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 PRINTS PR00721 Stomatin signature 254 277 1.3E-17 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 PRINTS PR00721 Stomatin signature 278 296 1.3E-17 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 PRINTS PR00721 Stomatin signature 234 251 1.3E-17 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 PRINTS PR00721 Stomatin signature 199 220 1.3E-17 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 PRINTS PR00721 Stomatin signature 297 318 1.3E-17 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 PRINTS PR00721 Stomatin signature 322 345 1.3E-17 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 SUPERFAMILY SSF117892 183 308 8.76E-27 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 Pfam PF01145 SPFH domain / Band 7 family 147 318 6.4E-21 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS11275 bd608c9064938513312873ef160cbefd 375 SMART SM00244 142 302 7.7E-17 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS27250 7333b8f4ef6cf1780831b2202467e78d 202 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 15 197 4.0E-89 T 29-03-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27250 7333b8f4ef6cf1780831b2202467e78d 202 TIGRFAM TIGR01323 nitrile_alph: nitrile hydratase, alpha subunit 15 201 7.9E-97 T 29-03-2018 IPR018141 Nitrile hydratase, alpha subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27250 7333b8f4ef6cf1780831b2202467e78d 202 PIRSF PIRSF001426 1 202 4.4E-100 T 29-03-2018 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27250 7333b8f4ef6cf1780831b2202467e78d 202 Pfam PF02979 Nitrile hydratase, alpha chain 15 196 2.9E-88 T 29-03-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27250 7333b8f4ef6cf1780831b2202467e78d 202 SUPERFAMILY SSF56209 3 200 7.98E-87 T 29-03-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS27250 7333b8f4ef6cf1780831b2202467e78d 202 Gene3D G3DSA:3.90.330.10 1 202 1.1E-93 T 29-03-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 CKQ55_RS07600 aab65d7cf9cb8f4749047d4d0c20cf5d 185 Gene3D G3DSA:1.10.132.20 75 184 3.0E-36 T 29-03-2018 CKQ55_RS07600 aab65d7cf9cb8f4749047d4d0c20cf5d 185 Gene3D G3DSA:1.10.132.20 2 74 1.2E-9 T 29-03-2018 CKQ55_RS07600 aab65d7cf9cb8f4749047d4d0c20cf5d 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.437 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CKQ55_RS07600 aab65d7cf9cb8f4749047d4d0c20cf5d 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 5.6E-81 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CKQ55_RS07600 aab65d7cf9cb8f4749047d4d0c20cf5d 185 Pfam PF01765 Ribosome recycling factor 20 183 5.8E-63 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CKQ55_RS07600 aab65d7cf9cb8f4749047d4d0c20cf5d 185 SUPERFAMILY SSF55194 2 184 5.76E-71 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CKQ55_RS15100 839389578aa62d705c412c72f84ffbe5 268 Pfam PF01226 Formate/nitrite transporter 22 247 1.0E-57 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15100 839389578aa62d705c412c72f84ffbe5 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CKQ55_RS15100 839389578aa62d705c412c72f84ffbe5 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 2.7E-81 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15100 839389578aa62d705c412c72f84ffbe5 268 Gene3D G3DSA:1.20.1080.10 2 261 9.3E-62 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS15100 839389578aa62d705c412c72f84ffbe5 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CKQ55_RS31095 c1fe4a6ba8bdb02f781fbe46b6a89efd 464 Gene3D G3DSA:1.20.5.1000 65 126 1.2E-4 T 29-03-2018 CKQ55_RS31095 c1fe4a6ba8bdb02f781fbe46b6a89efd 464 Pfam PF03743 Bacterial conjugation TrbI-like protein 208 404 9.9E-30 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CKQ55_RS29675 632ace2decd22dcfcc910f279fe16bfd 286 Gene3D G3DSA:3.40.1440.10 20 115 7.9E-17 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS29675 632ace2decd22dcfcc910f279fe16bfd 286 SUPERFAMILY SSF82771 34 111 1.44E-9 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS29675 632ace2decd22dcfcc910f279fe16bfd 286 SMART SM00465 34 112 3.7E-14 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS10255 278cb475330f72e07df61607da2458b7 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 321 2.7E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS10255 278cb475330f72e07df61607da2458b7 341 Gene3D G3DSA:1.10.3470.10 41 327 1.1E-26 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS06410 c01cf8cc8cec02af7486b266c31f0cb9 463 Pfam PF00557 Metallopeptidase family M24 204 398 1.2E-9 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS06410 c01cf8cc8cec02af7486b266c31f0cb9 463 Gene3D G3DSA:3.40.350.10 28 176 8.2E-14 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CKQ55_RS06410 c01cf8cc8cec02af7486b266c31f0cb9 463 Pfam PF01321 Creatinase/Prolidase N-terminal domain 31 140 3.4E-5 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CKQ55_RS06410 c01cf8cc8cec02af7486b266c31f0cb9 463 Gene3D G3DSA:3.90.230.10 177 421 2.4E-23 T 29-03-2018 CKQ55_RS06410 c01cf8cc8cec02af7486b266c31f0cb9 463 SUPERFAMILY SSF53092 21 138 7.85E-7 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CKQ55_RS06410 c01cf8cc8cec02af7486b266c31f0cb9 463 SUPERFAMILY SSF55920 195 401 2.49E-23 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS16465 441701512505f9a6e4284b171d8e265e 333 Pfam PF13407 Periplasmic binding protein domain 23 278 3.2E-54 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS16465 441701512505f9a6e4284b171d8e265e 333 Gene3D G3DSA:3.40.50.2300 4 133 3.6E-15 T 29-03-2018 CKQ55_RS16465 441701512505f9a6e4284b171d8e265e 333 Gene3D G3DSA:3.40.50.2300 134 333 4.1E-24 T 29-03-2018 CKQ55_RS16465 441701512505f9a6e4284b171d8e265e 333 SUPERFAMILY SSF53822 21 333 1.37E-85 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 98 745 2.9E-120 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 Gene3D G3DSA:2.170.130.10 44 209 4.0E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 61 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 Gene3D G3DSA:2.40.170.20 210 745 4.0E-64 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 Pfam PF00593 TonB dependent receptor 279 743 1.2E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 728 745 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 SUPERFAMILY SSF56935 88 745 3.66E-103 T 29-03-2018 CKQ55_RS05000 928a4c5f6413b2ac9072b0490b84ded2 745 Pfam PF07715 TonB-dependent Receptor Plug Domain 97 193 1.3E-12 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 Gene3D G3DSA:3.40.190.10 186 265 2.2E-5 T 29-03-2018 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 SUPERFAMILY SSF46785 1 85 4.63E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 Gene3D G3DSA:1.10.10.10 1 84 3.9E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 Pfam PF03466 LysR substrate binding domain 89 251 3.7E-17 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 SUPERFAMILY SSF53850 90 283 2.9E-18 T 29-03-2018 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17500 233660c760dae5d364df98370a6ca742 298 Gene3D G3DSA:3.40.190.10 85 185 4.7E-12 T 29-03-2018 CKQ55_RS29805 57d1b00b027ea27f5a0bbb4d10c2bf11 183 Gene3D G3DSA:3.40.109.10 1 181 3.5E-33 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS29805 57d1b00b027ea27f5a0bbb4d10c2bf11 183 Pfam PF00881 Nitroreductase family 9 161 1.2E-23 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CKQ55_RS29805 57d1b00b027ea27f5a0bbb4d10c2bf11 183 SUPERFAMILY SSF55469 1 172 7.07E-40 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS29805 57d1b00b027ea27f5a0bbb4d10c2bf11 183 PIRSF PIRSF000232 1 182 5.5E-65 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CKQ55_RS03240 713f041888450a1072c5c979b5a40bb5 368 Pfam PF12698 ABC-2 family transporter protein 25 359 1.6E-47 T 29-03-2018 CKQ55_RS03240 713f041888450a1072c5c979b5a40bb5 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 5.6E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS03240 713f041888450a1072c5c979b5a40bb5 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 5.6E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS03240 713f041888450a1072c5c979b5a40bb5 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 5.6E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS03240 713f041888450a1072c5c979b5a40bb5 368 Gene3D G3DSA:3.40.1710.10 38 188 1.8E-26 T 29-03-2018 CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 Gene3D G3DSA:2.40.100.10 14 189 5.5E-53 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 9.0E-50 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 SUPERFAMILY SSF50891 25 188 2.63E-58 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.1E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 1.1E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 1.1E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CKQ55_RS15125 a1e782bbffdbc369bc9753cc36d732fc 189 PIRSF PIRSF001467 13 187 6.9E-27 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CKQ55_RS25125 3f5ed9a708017f804c4385b34d1ce876 315 Pfam PF01497 Periplasmic binding protein 95 258 2.5E-20 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS25125 3f5ed9a708017f804c4385b34d1ce876 315 SUPERFAMILY SSF53807 15 295 7.06E-41 T 29-03-2018 CKQ55_RS25125 3f5ed9a708017f804c4385b34d1ce876 315 Gene3D G3DSA:3.40.50.1980 18 133 2.1E-22 T 29-03-2018 CKQ55_RS25125 3f5ed9a708017f804c4385b34d1ce876 315 Gene3D G3DSA:3.40.50.1980 134 312 2.3E-22 T 29-03-2018 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 Pfam PF01555 DNA methylase 21 131 2.5E-9 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 Pfam PF01555 DNA methylase 149 206 7.5E-19 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 SUPERFAMILY SSF53335 3 213 7.1E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 Gene3D G3DSA:3.40.50.150 1 225 4.3E-39 T 29-03-2018 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 7.7E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 193 213 7.7E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 151 168 7.7E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 170 188 7.7E-22 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30815 085592debbf6c8f17a3cfca36bb26ef5 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 Gene3D G3DSA:1.10.287.130 129 199 6.5E-8 T 29-03-2018 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 201 2.1E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 SMART SM00387 250 358 1.2E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 SUPERFAMILY SSF47384 127 201 1.96E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 SMART SM00388 143 203 7.1E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 356 1.4E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 355 3.6E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 3.6E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 3.6E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 Gene3D G3DSA:3.30.565.10 210 365 9.7E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS03310 78b1ce10a5e868ac2ce181646c3505d4 365 SUPERFAMILY SSF55874 193 359 2.62E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS14075 12350050929e247ef4315f63a4c7bb56 97 SMART SM00530 37 91 4.9E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS14075 12350050929e247ef4315f63a4c7bb56 97 SUPERFAMILY SSF47413 40 80 4.86E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS14075 12350050929e247ef4315f63a4c7bb56 97 Gene3D G3DSA:1.10.260.40 15 86 4.4E-9 T 29-03-2018 CKQ55_RS14075 12350050929e247ef4315f63a4c7bb56 97 Pfam PF01381 Helix-turn-helix 40 80 2.2E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS07260 6f97f5d08ea736729761cab646f1eefc 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 412 1.4E-201 T 29-03-2018 IPR010520 UPF0255 family CKQ55_RS07260 6f97f5d08ea736729761cab646f1eefc 414 SUPERFAMILY SSF53474 46 412 2.78E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS07260 6f97f5d08ea736729761cab646f1eefc 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 59.319 T 29-03-2018 IPR010520 UPF0255 family CKQ55_RS07260 6f97f5d08ea736729761cab646f1eefc 414 Gene3D G3DSA:3.40.50.1820 154 414 3.9E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS07260 6f97f5d08ea736729761cab646f1eefc 414 Gene3D G3DSA:1.20.1440.110 49 153 8.6E-23 T 29-03-2018 CKQ55_RS12045 8f3f90e08000e60dfae79998765e43de 247 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS12045 8f3f90e08000e60dfae79998765e43de 247 Pfam PF01048 Phosphorylase superfamily 15 201 2.3E-33 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS12045 8f3f90e08000e60dfae79998765e43de 247 SUPERFAMILY SSF53167 2 203 1.31E-63 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS12045 8f3f90e08000e60dfae79998765e43de 247 Gene3D G3DSA:3.40.50.1580 9 241 1.3E-46 T 29-03-2018 CKQ55_RS04060 f8c9c12d5b6b2d9465dd63fe5bc4ada4 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 1.8E-38 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS04060 f8c9c12d5b6b2d9465dd63fe5bc4ada4 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.149 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CKQ55_RS04060 f8c9c12d5b6b2d9465dd63fe5bc4ada4 512 Gene3D G3DSA:3.60.110.10 219 482 1.2E-35 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS04060 f8c9c12d5b6b2d9465dd63fe5bc4ada4 512 SUPERFAMILY SSF56317 215 490 2.22E-36 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS04060 f8c9c12d5b6b2d9465dd63fe5bc4ada4 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 8.2E-117 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 Pfam PF00005 ABC transporter 336 485 7.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 Pfam PF00005 ABC transporter 33 196 3.2E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 ProSitePatterns PS00211 ABC transporters family signature. 459 473 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 538 570 1.9E-8 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 289 3.9E-8 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 Gene3D G3DSA:3.40.50.300 9 297 1.5E-66 T 29-03-2018 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 Gene3D G3DSA:3.40.50.300 305 592 5.9E-73 T 29-03-2018 CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 SMART SM00382 344 536 9.5E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 SMART SM00382 41 246 5.9E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 SUPERFAMILY SSF52540 12 268 3.06E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03000 294fdb1b5deeb5526ca25ce82dfd9e55 617 SUPERFAMILY SSF52540 308 558 7.03E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20960 54340fd673398064a641a5a4e74f5548 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.315 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CKQ55_RS20960 54340fd673398064a641a5a4e74f5548 189 SUPERFAMILY SSF52507 2 187 7.72E-60 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS20960 54340fd673398064a641a5a4e74f5548 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 3.8E-71 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CKQ55_RS20960 54340fd673398064a641a5a4e74f5548 189 Gene3D G3DSA:3.40.50.1950 2 189 2.3E-53 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS20960 54340fd673398064a641a5a4e74f5548 189 Pfam PF02441 Flavoprotein 2 165 9.8E-24 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 Pfam PF07687 Peptidase dimerisation domain 223 318 1.7E-5 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 SUPERFAMILY SSF55031 224 338 1.03E-27 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 Pfam PF01546 Peptidase family M20/M25/M40 93 416 2.7E-38 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 21 417 3.2E-131 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 Gene3D G3DSA:3.40.630.10 13 261 1.1E-45 T 29-03-2018 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 Gene3D G3DSA:3.40.630.10 262 422 9.5E-27 T 29-03-2018 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 SUPERFAMILY SSF53187 13 234 7.86E-99 T 29-03-2018 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 SUPERFAMILY SSF53187 346 419 7.86E-99 T 29-03-2018 CKQ55_RS04670 76be37292ebb94d3262245736b421cf8 422 PIRSF PIRSF001235 15 422 5.2E-135 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CKQ55_RS07680 0da0704c191e373ba2bf1c53b2ca53fc 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.701 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CKQ55_RS07680 0da0704c191e373ba2bf1c53b2ca53fc 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 114 2.6E-38 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CKQ55_RS07680 0da0704c191e373ba2bf1c53b2ca53fc 114 Gene3D G3DSA:2.60.300.12 8 114 5.4E-38 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS07680 0da0704c191e373ba2bf1c53b2ca53fc 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 2.0E-19 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS07680 0da0704c191e373ba2bf1c53b2ca53fc 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CKQ55_RS07680 0da0704c191e373ba2bf1c53b2ca53fc 114 SUPERFAMILY SSF89360 8 103 2.55E-30 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS16315 4f26dfb2dbe143d70d32159b88178a78 233 PIRSF PIRSF006232 1 230 7.4E-31 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CKQ55_RS16315 4f26dfb2dbe143d70d32159b88178a78 233 SUPERFAMILY SSF51182 1 231 4.54E-45 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS16315 4f26dfb2dbe143d70d32159b88178a78 233 Gene3D G3DSA:2.60.120.10 12 134 2.4E-22 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS16315 4f26dfb2dbe143d70d32159b88178a78 233 Pfam PF02678 Pirin 5 119 2.3E-22 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CKQ55_RS16315 4f26dfb2dbe143d70d32159b88178a78 233 Gene3D G3DSA:2.60.120.10 135 233 1.9E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 SMART SM00922 140 236 6.2E-15 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 187 218 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 Gene3D G3DSA:3.30.390.10 4 116 3.9E-13 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 28 121 1.0E-5 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 SUPERFAMILY SSF51604 109 354 4.45E-49 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 Pfam PF13378 Enolase C-terminal domain-like 142 352 6.2E-38 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 SUPERFAMILY SSF54826 18 121 4.12E-13 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS01710 aa40187d3fa7e57f3dbecec33fadcc24 366 Gene3D G3DSA:3.20.20.120 117 347 1.8E-45 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS30350 32d70405d8ddd3c23c5df8904fd5a852 113 Gene3D G3DSA:3.40.1800.10 16 104 3.4E-13 T 29-03-2018 CKQ55_RS30350 32d70405d8ddd3c23c5df8904fd5a852 113 Pfam PF01844 HNH endonuclease 38 93 7.0E-9 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CKQ55_RS30350 32d70405d8ddd3c23c5df8904fd5a852 113 SMART SM00507 25 89 0.007 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS17375 e316512da11546fe72ccfd05c151be55 163 Gene3D G3DSA:3.40.30.10 26 153 2.1E-20 T 29-03-2018 CKQ55_RS17375 e316512da11546fe72ccfd05c151be55 163 Pfam PF00578 AhpC/TSA family 38 140 7.2E-11 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS17375 e316512da11546fe72ccfd05c151be55 163 SUPERFAMILY SSF52833 37 152 3.64E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 Pfam PF07690 Major Facilitator Superfamily 34 400 7.4E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 SUPERFAMILY SSF103473 13 440 9.16E-84 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 4.2E-263 T 29-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 Gene3D G3DSA:1.20.1250.20 18 224 1.5E-34 T 29-03-2018 CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 Gene3D G3DSA:1.20.1250.20 240 448 8.9E-31 T 29-03-2018 CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.5E-165 T 29-03-2018 CKQ55_RS21345 c5beebf2d32fc81e530248ec5548971b 448 PIRSF PIRSF002808 5 448 5.5E-173 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 Gene3D G3DSA:3.40.50.300 13 342 1.5E-81 T 29-03-2018 CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 SMART SM00382 49 240 2.9E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 Pfam PF00005 ABC transporter 41 190 1.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 307 1.5E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 SUPERFAMILY SSF52540 16 262 4.58E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04685 bf063ff3223db3dde4921dfa1ffb32ae 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 3.0E-27 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 2.4E-18 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 3.0E-30 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 8.0E-38 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 SUPERFAMILY SSF54893 2 100 4.58E-35 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 1.9E-71 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 Gene3D G3DSA:2.30.30.20 102 150 2.4E-18 T 29-03-2018 CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 Gene3D G3DSA:3.30.70.140 5 97 1.9E-34 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 SUPERFAMILY SSF57825 101 150 1.22E-15 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CKQ55_RS10065 b26461c088058acbe94d21f2875f2d41 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.022 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CKQ55_RS05800 3feca7a87950c95ff8dac439040a5c25 226 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS05800 3feca7a87950c95ff8dac439040a5c25 226 SMART SM00382 32 214 2.0E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS05800 3feca7a87950c95ff8dac439040a5c25 226 Gene3D G3DSA:3.40.50.300 4 226 1.2E-56 T 29-03-2018 CKQ55_RS05800 3feca7a87950c95ff8dac439040a5c25 226 SUPERFAMILY SSF52540 4 211 1.81E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05800 3feca7a87950c95ff8dac439040a5c25 226 Pfam PF00005 ABC transporter 23 166 2.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS15990 b3ba85c5489464aff0383d64d7cffd3c 323 Gene3D G3DSA:1.10.600.10 1 323 1.5E-103 T 29-03-2018 IPR008949 Isoprenoid synthase domain CKQ55_RS15990 b3ba85c5489464aff0383d64d7cffd3c 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CKQ55_RS15990 b3ba85c5489464aff0383d64d7cffd3c 323 Pfam PF00348 Polyprenyl synthetase 30 263 3.9E-76 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CKQ55_RS15990 b3ba85c5489464aff0383d64d7cffd3c 323 SUPERFAMILY SSF48576 6 322 4.46E-101 T 29-03-2018 IPR008949 Isoprenoid synthase domain CKQ55_RS15990 b3ba85c5489464aff0383d64d7cffd3c 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 SUPERFAMILY SSF52540 186 422 9.25E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 Gene3D G3DSA:1.10.10.60 435 507 1.5E-10 T 29-03-2018 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 SUPERFAMILY SSF55781 24 170 2.4E-16 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 Gene3D G3DSA:3.40.50.300 182 359 1.2E-26 T 29-03-2018 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 Gene3D G3DSA:3.30.450.40 5 176 3.7E-18 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 Pfam PF01590 GAF domain 25 161 4.4E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 SUPERFAMILY SSF46689 448 503 2.9E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 SMART SM00065 20 167 2.4E-17 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 Gene3D G3DSA:1.10.8.60 360 434 2.2E-19 T 29-03-2018 CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 SMART SM00382 207 350 1.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19175 5e575622843cad2d4b9f652cce30651d 514 Pfam PF00158 Sigma-54 interaction domain 188 353 1.0E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS16765 0d7c6f232cb3b68dda9f0384c519075c 842 SUPERFAMILY SSF141729 38 160 2.35E-27 T 29-03-2018 CKQ55_RS16765 0d7c6f232cb3b68dda9f0384c519075c 842 Pfam PF00577 Outer membrane usher protein 201 753 3.8E-166 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS16765 0d7c6f232cb3b68dda9f0384c519075c 842 Pfam PF13953 PapC C-terminal domain 767 818 3.8E-9 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS16765 0d7c6f232cb3b68dda9f0384c519075c 842 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 315 325 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS16765 0d7c6f232cb3b68dda9f0384c519075c 842 Pfam PF13954 PapC N-terminal domain 39 183 1.1E-35 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS07320 34bdaeed96cd7c40ef65a18d14dd13d6 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 2.4E-185 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CKQ55_RS07320 34bdaeed96cd7c40ef65a18d14dd13d6 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 7.6E-112 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CKQ55_RS07320 34bdaeed96cd7c40ef65a18d14dd13d6 447 Gene3D G3DSA:2.40.50.100 26 128 3.9E-5 T 29-03-2018 CKQ55_RS07320 34bdaeed96cd7c40ef65a18d14dd13d6 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 46.839 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 CKQ55_RS07320 34bdaeed96cd7c40ef65a18d14dd13d6 447 Pfam PF11973 NQRA C-terminal domain 262 311 1.4E-20 T 29-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 CKQ55_RS27040 6f589fddc20bd8f539703da11d8fb77c 251 PIRSF PIRSF034405 1 251 2.5E-100 T 29-03-2018 IPR017027 Uncharacterised conserved protein UCP034405 CKQ55_RS27040 6f589fddc20bd8f539703da11d8fb77c 251 Gene3D G3DSA:3.40.50.880 1 250 4.2E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS27040 6f589fddc20bd8f539703da11d8fb77c 251 SUPERFAMILY SSF52317 4 248 1.99E-63 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS27040 6f589fddc20bd8f539703da11d8fb77c 251 Pfam PF07090 Putative glutamine amidotransferase 4 248 6.1E-110 T 29-03-2018 IPR010768 Putative glutamine amidotransferase CKQ55_RS24590 2c8dff2c3c6ce66d34fd8e03413c5424 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 53.591 T 29-03-2018 IPR028616 Regulator of RpoS CKQ55_RS24590 2c8dff2c3c6ce66d34fd8e03413c5424 337 Pfam PF00072 Response regulator receiver domain 10 120 4.5E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS24590 2c8dff2c3c6ce66d34fd8e03413c5424 337 SMART SM00448 8 120 6.5E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS24590 2c8dff2c3c6ce66d34fd8e03413c5424 337 SUPERFAMILY SSF52172 7 126 2.28E-34 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS24590 2c8dff2c3c6ce66d34fd8e03413c5424 337 Gene3D G3DSA:3.40.50.2300 3 293 1.1E-35 T 29-03-2018 CKQ55_RS21825 6b224fbf631b822df0e981ff7991eba6 452 SUPERFAMILY SSF103473 11 431 3.27E-84 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS21825 6b224fbf631b822df0e981ff7991eba6 452 Pfam PF07690 Major Facilitator Superfamily 28 287 2.6E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS21825 6b224fbf631b822df0e981ff7991eba6 452 Gene3D G3DSA:1.20.1250.20 233 436 9.3E-32 T 29-03-2018 CKQ55_RS21825 6b224fbf631b822df0e981ff7991eba6 452 Gene3D G3DSA:1.20.1250.20 13 210 1.3E-39 T 29-03-2018 CKQ55_RS03130 ab62cd1fd4e5aa3bed689366afb2780f 240 Pfam PF00005 ABC transporter 17 165 7.8E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03130 ab62cd1fd4e5aa3bed689366afb2780f 240 SUPERFAMILY SSF52540 1 235 2.4E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03130 ab62cd1fd4e5aa3bed689366afb2780f 240 Gene3D G3DSA:3.40.50.300 1 240 1.2E-75 T 29-03-2018 CKQ55_RS03130 ab62cd1fd4e5aa3bed689366afb2780f 240 SMART SM00382 26 213 2.4E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03130 ab62cd1fd4e5aa3bed689366afb2780f 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03130 ab62cd1fd4e5aa3bed689366afb2780f 240 PIRSF PIRSF039085 1 240 5.7E-110 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS18760 27aa296d15335c54e693d77ead2ae9a4 404 Pfam PF07690 Major Facilitator Superfamily 12 346 4.4E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS18760 27aa296d15335c54e693d77ead2ae9a4 404 SUPERFAMILY SSF103473 3 388 1.44E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18760 27aa296d15335c54e693d77ead2ae9a4 404 Gene3D G3DSA:1.20.1250.20 195 392 4.5E-23 T 29-03-2018 CKQ55_RS18760 27aa296d15335c54e693d77ead2ae9a4 404 Gene3D G3DSA:1.20.1250.20 1 190 2.8E-29 T 29-03-2018 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 322 1.4E-159 T 29-03-2018 IPR014317 Transcription activator PspF CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 Pfam PF02954 Bacterial regulatory protein, Fis family 284 321 1.0E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 288 305 4.7E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 324 4.7E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 SUPERFAMILY SSF52540 9 250 8.57E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 SUPERFAMILY SSF46689 222 324 1.84E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 Gene3D G3DSA:3.40.50.300 1 179 1.1E-26 T 29-03-2018 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 Gene3D G3DSA:1.10.10.60 267 324 1.3E-10 T 29-03-2018 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 Gene3D G3DSA:1.10.8.60 180 265 3.1E-21 T 29-03-2018 CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 SMART SM00382 28 180 2.9E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CKQ55_RS29325 2704ad256ddac626c8b5c426ce627e6b 324 Pfam PF00158 Sigma-54 interaction domain 9 170 3.9E-61 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS07745 d76a81ca18d0062c403ab4158f77f155 279 SUPERFAMILY SSF50156 178 274 5.97E-18 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07745 d76a81ca18d0062c403ab4158f77f155 279 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 214 240 - T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07745 d76a81ca18d0062c403ab4158f77f155 279 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 21 275 3.3E-102 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07745 d76a81ca18d0062c403ab4158f77f155 279 Gene3D G3DSA:2.30.42.10 77 279 4.7E-10 T 29-03-2018 CKQ55_RS07745 d76a81ca18d0062c403ab4158f77f155 279 Pfam PF11356 Type II secretion system protein C 27 161 4.5E-22 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal CKQ55_RS17565 51c9ce31de51f53f3fe5ef6c7b31c707 297 PIRSF PIRSF032620 3 293 1.2E-70 T 29-03-2018 IPR014571 Uncharacterised conserved protein UCP032620 CKQ55_RS17565 51c9ce31de51f53f3fe5ef6c7b31c707 297 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 154 270 3.6E-39 T 29-03-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain CKQ55_RS09300 710df6b2bb9d05fc48d4712476a02ad1 260 Gene3D G3DSA:3.40.50.360 1 258 4.3E-68 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS09300 710df6b2bb9d05fc48d4712476a02ad1 260 SUPERFAMILY SSF52218 1 243 1.9E-70 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS09300 710df6b2bb9d05fc48d4712476a02ad1 260 Pfam PF02525 Flavodoxin-like fold 1 214 4.2E-57 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 29-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.7E-14 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.7E-14 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.7E-14 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 1.5E-46 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 SUPERFAMILY SSF81330 12 127 1.31E-36 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 2.9E-59 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS15465 3365fdde05a7ad850762c0522b552531 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 30.907 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 SUPERFAMILY SSF52172 1 126 2.56E-26 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 SMART SM00850 148 246 1.4E-37 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 SMART SM00448 1 112 2.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 Gene3D G3DSA:2.20.25.10 209 246 2.2E-17 T 29-03-2018 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 Pfam PF04397 LytTr DNA-binding domain 149 245 7.3E-32 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 Gene3D G3DSA:3.40.50.2300 1 134 1.3E-24 T 29-03-2018 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 Gene3D G3DSA:2.40.50.40 138 208 9.3E-17 T 29-03-2018 CKQ55_RS20780 2e6c7c1bbd76808de57ca5c5d255dcb1 247 Pfam PF00072 Response regulator receiver domain 3 112 7.8E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS14670 966c389ff06a41bf5a5a04c65d3e7e7d 83 Gene3D G3DSA:1.10.1200.10 5 82 1.8E-17 T 29-03-2018 CKQ55_RS14670 966c389ff06a41bf5a5a04c65d3e7e7d 83 SUPERFAMILY SSF47336 4 81 3.66E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS14670 966c389ff06a41bf5a5a04c65d3e7e7d 83 Pfam PF00550 Phosphopantetheine attachment site 10 76 1.7E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS14670 966c389ff06a41bf5a5a04c65d3e7e7d 83 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.916 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CKQ55_RS10400 010715dc36fce5eef36028bc66b0eb81 131 Gene3D G3DSA:3.30.70.60 1 100 4.8E-30 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CKQ55_RS10400 010715dc36fce5eef36028bc66b0eb81 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 29-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS10400 010715dc36fce5eef36028bc66b0eb81 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10400 010715dc36fce5eef36028bc66b0eb81 131 Pfam PF01250 Ribosomal protein S6 3 91 1.8E-27 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10400 010715dc36fce5eef36028bc66b0eb81 131 SUPERFAMILY SSF54995 1 103 1.96E-37 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS10400 010715dc36fce5eef36028bc66b0eb81 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.611 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CKQ55_RS21920 c1ac7d896dcf9a68dba0690357212109 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 373 5.9E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21920 c1ac7d896dcf9a68dba0690357212109 385 Gene3D G3DSA:1.10.3720.10 7 384 3.4E-21 T 29-03-2018 CKQ55_RS21920 c1ac7d896dcf9a68dba0690357212109 385 SUPERFAMILY SSF161098 175 371 7.06E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 1.1E-57 T 29-03-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 Gene3D G3DSA:1.10.10.10 1 132 1.5E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 2.4E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 2.4E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 2.4E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 SUPERFAMILY SSF46785 3 135 3.21E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 SMART SM00347 22 122 5.6E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09055 cc7af4da7268d3d4b18cf5d66d79e8fd 145 Pfam PF01047 MarR family 29 86 5.4E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS27745 0729d03c668d05cb17bcebbd053fe9c9 462 SUPERFAMILY SSF103473 18 459 4.71E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27745 0729d03c668d05cb17bcebbd053fe9c9 462 Gene3D G3DSA:1.20.1250.20 12 234 3.9E-15 T 29-03-2018 CKQ55_RS27745 0729d03c668d05cb17bcebbd053fe9c9 462 Gene3D G3DSA:1.20.1250.20 242 462 1.5E-24 T 29-03-2018 CKQ55_RS27745 0729d03c668d05cb17bcebbd053fe9c9 462 Pfam PF07690 Major Facilitator Superfamily 43 419 6.1E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS27745 0729d03c668d05cb17bcebbd053fe9c9 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 7.6E-104 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CKQ55_RS16710 b9b706db035c0ad5727ee55b9899bae6 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.858 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CKQ55_RS16710 b9b706db035c0ad5727ee55b9899bae6 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 3.9E-88 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CKQ55_RS16710 b9b706db035c0ad5727ee55b9899bae6 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 1.1E-104 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 Gene3D G3DSA:2.120.10.30 1 292 1.1E-37 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 196 213 9.3E-35 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 9.3E-35 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 9.3E-35 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 238 256 9.3E-35 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 9.3E-35 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 9.3E-35 T 29-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 256 3.8E-78 T 29-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CKQ55_RS17675 8f3afaf196424f27fbee90f8219fe41a 292 SUPERFAMILY SSF63829 6 290 5.07E-64 T 29-03-2018 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.9E-27 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 3.1E-196 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 Gene3D G3DSA:3.40.640.10 130 424 7.6E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 SUPERFAMILY SSF55904 567 708 1.03E-43 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 Gene3D G3DSA:3.90.1150.10 425 594 1.4E-55 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 Gene3D G3DSA:3.90.100.10 595 715 2.3E-37 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.0E-44 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 SUPERFAMILY SSF53383 130 561 3.19E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CKQ55_RS05155 a0e458db79fff48bbe5ff0dcc07dacd7 715 PIRSF PIRSF009393 1 712 1.3E-284 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CKQ55_RS23205 a77fc436658cbe7d055a5a5f6bd0a081 292 Pfam PF12146 Serine aminopeptidase, S33 34 250 3.8E-26 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CKQ55_RS23205 a77fc436658cbe7d055a5a5f6bd0a081 292 SUPERFAMILY SSF53474 14 284 2.78E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23205 a77fc436658cbe7d055a5a5f6bd0a081 292 Gene3D G3DSA:3.40.50.1820 2 285 8.9E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS09765 e3bbb1255025ace7a48be815da29dcf0 98 Gene3D G3DSA:3.30.420.10 65 98 0.001 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS09765 e3bbb1255025ace7a48be815da29dcf0 98 Pfam PF13610 DDE domain 76 98 4.3E-8 T 29-03-2018 IPR032874 DDE domain CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 Gene3D G3DSA:3.40.640.10 100 348 5.0E-85 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 Gene3D G3DSA:3.90.1150.10 349 468 1.0E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 PIRSF PIRSF000521 174 217 1.1 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 PIRSF PIRSF000521 64 186 7.7E-4 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 PIRSF PIRSF000521 222 461 9.8E-41 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 Hamap MF_01276 Putrescine aminotransferase [patA]. 10 468 87.089 T 29-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 Pfam PF00202 Aminotransferase class-III 83 454 3.4E-103 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 277 314 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 SUPERFAMILY SSF53383 83 458 5.5E-120 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS16560 5112caefd7f5547bdc59b2db4a3dc7cc 468 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 17 458 4.8E-287 T 29-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 CKQ55_RS17440 7fe0765c31b7fdb21680007a11854bc0 88 Gene3D G3DSA:1.10.150.250 1 85 4.0E-26 T 29-03-2018 CKQ55_RS17440 7fe0765c31b7fdb21680007a11854bc0 88 SUPERFAMILY SSF109910 1 78 5.62E-27 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CKQ55_RS17440 7fe0765c31b7fdb21680007a11854bc0 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 4.3E-25 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CKQ55_RS27865 563eb35ec17a4f5b2eb56ff8fda2ad9a 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 7.4E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27865 563eb35ec17a4f5b2eb56ff8fda2ad9a 308 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 168 1.7E-14 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS27865 563eb35ec17a4f5b2eb56ff8fda2ad9a 308 Gene3D G3DSA:1.10.3720.10 14 279 1.1E-40 T 29-03-2018 CKQ55_RS27865 563eb35ec17a4f5b2eb56ff8fda2ad9a 308 SUPERFAMILY SSF161098 52 265 4.32E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 1.2E-162 T 29-03-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 Gene3D G3DSA:2.40.50.140 466 509 1.8E-24 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 SUPERFAMILY SSF53067 255 403 1.61E-67 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 SUPERFAMILY SSF53067 3 93 1.61E-67 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 Gene3D G3DSA:3.30.420.40 1 107 9.4E-14 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 Gene3D G3DSA:3.30.420.40 310 410 0.0011 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 Gene3D G3DSA:3.30.420.40 510 610 9.2E-19 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 Gene3D G3DSA:3.50.30.70 108 247 1.1E-67 T 29-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 SUPERFAMILY SSF53067 407 600 2.45E-34 T 29-03-2018 CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 7.4E-286 T 29-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 SUPERFAMILY SSF82317 93 254 2.62E-67 T 29-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain CKQ55_RS18245 304ff376038048fe3b314944aabc04e7 610 PIRSF PIRSF011502 1 608 0.0 T 29-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit CKQ55_RS26530 faea895467c71257b3d1dcbba4e9bb44 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 1.3E-129 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CKQ55_RS26530 faea895467c71257b3d1dcbba4e9bb44 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.76 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CKQ55_RS26530 faea895467c71257b3d1dcbba4e9bb44 308 Gene3D G3DSA:3.40.710.10 3 308 2.1E-124 T 29-03-2018 CKQ55_RS26530 faea895467c71257b3d1dcbba4e9bb44 308 SUPERFAMILY SSF56601 6 308 1.07E-114 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS26530 faea895467c71257b3d1dcbba4e9bb44 308 Pfam PF04960 Glutaminase 24 308 7.6E-114 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CKQ55_RS15135 1e074d63bb5c72436413579cd1ef60af 200 SUPERFAMILY SSF140931 41 197 3.01E-32 T 29-03-2018 IPR003812 Fido domain CKQ55_RS15135 1e074d63bb5c72436413579cd1ef60af 200 Gene3D G3DSA:1.10.3290.10 21 199 1.8E-24 T 29-03-2018 IPR003812 Fido domain CKQ55_RS15135 1e074d63bb5c72436413579cd1ef60af 200 Pfam PF02661 Fic/DOC family 58 152 2.3E-16 T 29-03-2018 IPR003812 Fido domain CKQ55_RS10075 37570da4f28b93b7699a1fc215bf49cd 128 SUPERFAMILY SSF55298 4 127 4.08E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS10075 37570da4f28b93b7699a1fc215bf49cd 128 Gene3D G3DSA:3.30.1330.40 1 128 1.8E-46 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS10075 37570da4f28b93b7699a1fc215bf49cd 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 2.7E-45 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS10075 37570da4f28b93b7699a1fc215bf49cd 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.0E-53 T 29-03-2018 IPR006056 RidA family CKQ55_RS10075 37570da4f28b93b7699a1fc215bf49cd 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 29-03-2018 IPR019897 RidA, conserved site CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 Gene3D G3DSA:3.40.50.2300 61 181 2.0E-25 T 29-03-2018 CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 55 3.4E-12 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 Gene3D G3DSA:3.40.50.2300 182 312 3.3E-32 T 29-03-2018 CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 SUPERFAMILY SSF47413 8 66 2.74E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 Gene3D G3DSA:1.10.260.40 9 60 1.3E-17 T 29-03-2018 CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 SUPERFAMILY SSF53822 65 319 1.02E-45 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 Pfam PF13377 Periplasmic binding protein-like domain 176 319 1.9E-20 T 29-03-2018 CKQ55_RS22970 88961fcbaa27196b526e20b2398b944b 334 SMART SM00354 8 78 2.0E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 SMART SM00346 25 115 4.9E-38 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 SUPERFAMILY SSF46785 25 98 2.91E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 Gene3D G3DSA:3.30.450.40 94 274 2.3E-48 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 Gene3D G3DSA:1.10.10.10 7 86 3.3E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 Pfam PF01614 Bacterial transcriptional regulator 145 268 3.7E-40 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 Pfam PF09339 IclR helix-turn-helix domain 27 77 1.9E-18 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS11370 27ee3b42244aec4df84ed81756355b11 275 SUPERFAMILY SSF55781 96 272 1.44E-48 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 Gene3D G3DSA:3.10.20.30 270 368 1.1E-17 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 SUPERFAMILY SSF54292 284 367 8.26E-21 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 SUPERFAMILY SSF141673 4 132 3.01E-28 T 29-03-2018 CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 Pfam PF03476 MOSC N-terminal beta barrel domain 1 115 1.1E-27 T 29-03-2018 IPR005303 MOSC, N-terminal beta barrel CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 SUPERFAMILY SSF50800 147 264 3.3E-16 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 SUPERFAMILY SSF50800 3 50 3.3E-16 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 Gene3D G3DSA:2.40.33.20 1 269 9.8E-51 T 29-03-2018 CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 297 362 4.0E-13 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS01960 02be6e92a5f81b836a8048843206e1f3 369 Pfam PF03473 MOSC domain 139 261 1.4E-28 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CKQ55_RS02955 70f19a6669d07def3f7573ff7f076339 208 Gene3D G3DSA:1.20.1050.10 92 206 8.1E-29 T 29-03-2018 CKQ55_RS02955 70f19a6669d07def3f7573ff7f076339 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 138 196 2.1E-8 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS02955 70f19a6669d07def3f7573ff7f076339 208 Gene3D G3DSA:3.40.30.10 1 91 1.4E-27 T 29-03-2018 CKQ55_RS02955 70f19a6669d07def3f7573ff7f076339 208 SUPERFAMILY SSF52833 1 85 1.06E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS02955 70f19a6669d07def3f7573ff7f076339 208 SUPERFAMILY SSF47616 74 202 8.07E-29 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS02955 70f19a6669d07def3f7573ff7f076339 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 81 4.0E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 12 478 2.3E-256 T 29-03-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 Gene3D G3DSA:3.40.50.1980 311 387 1.3E-23 T 29-03-2018 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 Gene3D G3DSA:3.40.50.1980 388 478 1.8E-29 T 29-03-2018 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 27 472 6.6E-184 T 29-03-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 81 88 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 Gene3D G3DSA:3.40.50.1980 74 209 1.3E-35 T 29-03-2018 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 SUPERFAMILY SSF53807 11 478 7.32E-159 T 29-03-2018 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 62 466 3.0E-108 T 29-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 Gene3D G3DSA:3.40.50.1980 1 73 3.4E-18 T 29-03-2018 CKQ55_RS22870 d7a9e4704cf34d85b094dd73ec551192 482 Gene3D G3DSA:3.40.50.1980 210 310 2.5E-28 T 29-03-2018 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 SUPERFAMILY SSF55604 454 525 2.22E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 5.1E-87 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 525 5.2E-257 T 29-03-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.208|MetaCyc: PWY-6619 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 Gene3D G3DSA:3.30.1360.60 451 525 8.0E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 3.5E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 5.0E-16 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS25805 ef888199d686e3888735a9a29df631fe 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 4.8E-94 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS18165 8173b35733eb1773da7fc20c06392d87 359 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 353 3.2E-103 T 29-03-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CKQ55_RS18165 8173b35733eb1773da7fc20c06392d87 359 Gene3D G3DSA:3.40.640.10 38 248 2.7E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS18165 8173b35733eb1773da7fc20c06392d87 359 SUPERFAMILY SSF53383 5 356 7.15E-80 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS18165 8173b35733eb1773da7fc20c06392d87 359 Pfam PF00155 Aminotransferase class I and II 26 352 1.5E-39 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS18165 8173b35733eb1773da7fc20c06392d87 359 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CKQ55_RS18165 8173b35733eb1773da7fc20c06392d87 359 Gene3D G3DSA:3.90.1150.10 249 359 3.3E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS25720 4adb619386fa874d2dbf4a7d07a1acb4 235 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 2.5E-62 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS25720 4adb619386fa874d2dbf4a7d07a1acb4 235 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.505 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CKQ55_RS25720 4adb619386fa874d2dbf4a7d07a1acb4 235 PIRSF PIRSF006102 1 219 1.1E-79 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS25720 4adb619386fa874d2dbf4a7d07a1acb4 235 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 4.9E-82 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 366 386 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 7.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 Gene3D G3DSA:1.10.3860.10 1 419 2.9E-124 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 Pfam PF00375 Sodium:dicarboxylate symporter family 9 412 6.8E-116 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 44 59 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 2 429 47.704 T 29-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CKQ55_RS10930 52d95e2920b409d3dad4b10375aa84d7 437 SUPERFAMILY SSF118215 9 413 1.7E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS10520 8dec2ec3eadf4ef6992dcfaa0731cf35 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CKQ55_RS10520 8dec2ec3eadf4ef6992dcfaa0731cf35 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 29-03-2018 IPR010920 LSM domain CKQ55_RS10520 8dec2ec3eadf4ef6992dcfaa0731cf35 102 Pfam PF17209 Hfq protein 7 69 4.9E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CKQ55_RS10520 8dec2ec3eadf4ef6992dcfaa0731cf35 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CKQ55_RS10520 8dec2ec3eadf4ef6992dcfaa0731cf35 102 Gene3D G3DSA:2.30.30.100 4 73 1.1E-33 T 29-03-2018 CKQ55_RS06250 eef3ffb14ffd1166b10e9feff9ea476f 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 5.8E-39 T 29-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CKQ55_RS06250 eef3ffb14ffd1166b10e9feff9ea476f 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 1.7E-19 T 29-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CKQ55_RS05885 bff08240806a449b4a59aecbac3bb56d 434 Gene3D G3DSA:3.40.1190.20 32 431 6.4E-42 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS05885 bff08240806a449b4a59aecbac3bb56d 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS05885 bff08240806a449b4a59aecbac3bb56d 434 Pfam PF00294 pfkB family carbohydrate kinase 147 299 4.2E-9 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS05885 bff08240806a449b4a59aecbac3bb56d 434 SUPERFAMILY SSF53613 36 305 2.65E-44 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS05885 bff08240806a449b4a59aecbac3bb56d 434 SUPERFAMILY SSF53613 338 416 2.65E-44 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.4E-140 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.918 T 29-03-2018 IPR026593 Protein translocase subunit SecY CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PIRSF PIRSF004557 11 441 1.1E-122 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 Gene3D G3DSA:1.10.3370.10 9 439 1.3E-159 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 SUPERFAMILY SSF103491 16 424 4.97E-133 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 Pfam PF00344 SecY translocase 76 417 1.0E-118 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 2.0E-98 T 29-03-2018 CKQ55_RS15415 f984ac039260d02267dcdf1989394986 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CKQ55_RS21050 906abc8b74db9474011cd923fcb85a2d 463 Pfam PF03611 PTS system sugar-specific permease component 12 408 2.7E-149 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS06715 9c4970dc8551c93de928828bc11c74a1 468 PIRSF PIRSF006060 1 466 1.6E-85 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS06715 9c4970dc8551c93de928828bc11c74a1 468 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS06715 9c4970dc8551c93de928828bc11c74a1 468 Pfam PF00324 Amino acid permease 19 462 2.9E-115 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS12475 84a01d41e3306fafb49b325bf533e78d 174 Pfam PF00419 Fimbrial protein 27 174 1.9E-19 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12475 84a01d41e3306fafb49b325bf533e78d 174 SUPERFAMILY SSF49401 25 174 2.09E-34 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS12475 84a01d41e3306fafb49b325bf533e78d 174 Gene3D G3DSA:2.60.40.1090 24 174 2.2E-36 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS27360 6e57fb6dd6089bfd587c71e0fa7a52eb 150 SUPERFAMILY SSF54427 30 140 2.0E-26 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS27360 6e57fb6dd6089bfd587c71e0fa7a52eb 150 Pfam PF12680 SnoaL-like domain 37 132 2.9E-16 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CKQ55_RS27360 6e57fb6dd6089bfd587c71e0fa7a52eb 150 Gene3D G3DSA:3.10.450.50 22 150 4.7E-26 T 29-03-2018 CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 Pfam PF13439 Glycosyltransferase Family 4 18 200 6.6E-8 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 Pfam PF00535 Glycosyl transferase family 2 415 581 1.5E-24 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 Pfam PF00534 Glycosyl transferases group 1 227 354 7.6E-9 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 Gene3D G3DSA:3.40.50.2000 191 386 1.5E-14 T 29-03-2018 CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 SUPERFAMILY SSF53756 14 373 1.05E-30 T 29-03-2018 CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 Gene3D G3DSA:3.90.550.10 387 716 1.8E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS10770 9c94df37027ef089f626ddee774081f2 740 SUPERFAMILY SSF53448 410 651 5.34E-47 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14435 f9c02ecbfa46dfd46a1981b488597e82 224 Gene3D G3DSA:3.40.50.2020 57 224 4.6E-29 T 29-03-2018 CKQ55_RS14435 f9c02ecbfa46dfd46a1981b488597e82 224 SUPERFAMILY SSF53271 48 222 5.11E-36 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS14435 f9c02ecbfa46dfd46a1981b488597e82 224 Pfam PF00156 Phosphoribosyl transferase domain 149 221 3.2E-7 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.664 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 6.9E-55 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.4E-60 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 SMART SM01374 1 123 3.9E-86 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15365 085432ff5f62d9b40e7465024b6fef37 123 Gene3D G3DSA:2.40.150.20 1 123 2.9E-53 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CKQ55_RS12470 be08f10405590742a369f2bbe0528f9e 171 SUPERFAMILY SSF49401 23 171 2.73E-37 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS12470 be08f10405590742a369f2bbe0528f9e 171 Gene3D G3DSA:2.60.40.1090 22 171 6.7E-38 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12470 be08f10405590742a369f2bbe0528f9e 171 Pfam PF00419 Fimbrial protein 24 171 1.4E-21 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS06825 4c837a7f8e21183953e104f750bc2ca0 151 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 151 2.3E-40 T 29-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CKQ55_RS06825 4c837a7f8e21183953e104f750bc2ca0 151 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 36 151 3.9E-19 T 29-03-2018 CKQ55_RS06825 4c837a7f8e21183953e104f750bc2ca0 151 Gene3D G3DSA:3.40.190.10 24 123 4.0E-4 T 29-03-2018 CKQ55_RS06825 4c837a7f8e21183953e104f750bc2ca0 151 Gene3D G3DSA:3.40.190.10 124 151 3.0E-8 T 29-03-2018 CKQ55_RS06825 4c837a7f8e21183953e104f750bc2ca0 151 SUPERFAMILY SSF53850 49 151 1.46E-19 T 29-03-2018 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 PIRSF PIRSF039101 1 505 2.8E-205 T 29-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 5.9E-15 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.9E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.9E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.9E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.9E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.9E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 SUPERFAMILY SSF50249 13 155 1.96E-48 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 Gene3D G3DSA:3.30.930.10 156 501 1.7E-104 T 29-03-2018 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 Gene3D G3DSA:2.40.50.140 15 154 1.8E-41 T 29-03-2018 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 5.3E-238 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 8.5E-83 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.524 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS17475 13ad14a3c7b1f3cff6082e23b5ecbca5 505 SUPERFAMILY SSF55681 162 502 3.91E-123 T 29-03-2018 CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 Pfam PF00571 CBS domain 274 325 1.3E-6 T 29-03-2018 IPR000644 CBS domain CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 Pfam PF00571 CBS domain 206 261 7.1E-5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 PIRSF PIRSF004692 2 328 7.1E-135 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 4.7E-124 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 SUPERFAMILY SSF53697 16 326 1.76E-68 T 29-03-2018 CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 Gene3D G3DSA:3.10.580.10 205 326 1.4E-22 T 29-03-2018 CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 Gene3D G3DSA:3.40.50.10490 11 204 7.1E-56 T 29-03-2018 CKQ55_RS15940 41fe05db69820157fd1bb89169d00758 328 Pfam PF01380 SIS domain 46 177 1.6E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS00145 e0b69b1065f9652b348b6a9cf5f92e0f 368 Gene3D G3DSA:3.40.50.300 1 324 1.6E-19 T 29-03-2018 CKQ55_RS00145 e0b69b1065f9652b348b6a9cf5f92e0f 368 SUPERFAMILY SSF52540 238 321 2.87E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00145 e0b69b1065f9652b348b6a9cf5f92e0f 368 SUPERFAMILY SSF52540 146 170 2.87E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00145 e0b69b1065f9652b348b6a9cf5f92e0f 368 SUPERFAMILY SSF52540 1 99 2.87E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00145 e0b69b1065f9652b348b6a9cf5f92e0f 368 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 316 4.5E-21 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS30085 e0b69b1065f9652b348b6a9cf5f92e0f 368 Gene3D G3DSA:3.40.50.300 1 324 1.6E-19 T 29-03-2018 CKQ55_RS30085 e0b69b1065f9652b348b6a9cf5f92e0f 368 SUPERFAMILY SSF52540 238 321 2.87E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30085 e0b69b1065f9652b348b6a9cf5f92e0f 368 SUPERFAMILY SSF52540 146 170 2.87E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30085 e0b69b1065f9652b348b6a9cf5f92e0f 368 SUPERFAMILY SSF52540 1 99 2.87E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30085 e0b69b1065f9652b348b6a9cf5f92e0f 368 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 316 4.5E-21 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 Gene3D G3DSA:3.40.640.10 146 396 4.3E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 Gene3D G3DSA:3.90.1150.10 397 495 4.6E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 SMART SM00345 34 93 7.4E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 93 7.4E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 SUPERFAMILY SSF46785 21 97 6.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 Gene3D G3DSA:1.10.10.10 15 106 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 SUPERFAMILY SSF53383 102 493 9.68E-84 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS28425 8adc561b95e039ff2e31b277b6e271ec 498 Pfam PF00155 Aminotransferase class I and II 161 486 5.7E-23 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.2E-41 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Gene3D G3DSA:3.30.1840.10 109 307 7.2E-51 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 SUPERFAMILY SSF143724 107 313 7.65E-59 T 29-03-2018 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Gene3D G3DSA:3.30.870.10 317 499 8.3E-25 T 29-03-2018 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.8E-259 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 SUPERFAMILY SSF56024 501 682 2.92E-70 T 29-03-2018 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 PIRSF PIRSF015589 1 685 1.8E-243 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 3.1E-145 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Gene3D G3DSA:3.30.870.10 500 686 4.7E-35 T 29-03-2018 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 SUPERFAMILY SSF140356 3 105 1.1E-33 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.8E-31 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Gene3D G3DSA:1.20.58.310 9 108 4.0E-34 T 29-03-2018 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 SUPERFAMILY SSF56024 315 496 2.76E-57 T 29-03-2018 CKQ55_RS20295 ece402bee70bdbb6e4feca6e85cde016 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 681 27.319 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CKQ55_RS26350 8b2700d755026ba485251968a1d03fc7 343 SUPERFAMILY SSF51726 7 340 3.66E-68 T 29-03-2018 CKQ55_RS26350 8b2700d755026ba485251968a1d03fc7 343 Gene3D G3DSA:3.20.20.210 1 343 1.9E-87 T 29-03-2018 CKQ55_RS26350 8b2700d755026ba485251968a1d03fc7 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 1.6E-37 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS26350 8b2700d755026ba485251968a1d03fc7 343 PIRSF PIRSF005632 1 343 1.5E-195 T 29-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CKQ55_RS30425 493391b7bbcba7e6b2941a6207d6c126 1071 Gene3D G3DSA:3.40.50.150 85 821 2.4E-43 T 29-03-2018 CKQ55_RS30425 493391b7bbcba7e6b2941a6207d6c126 1071 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 674 680 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS30425 493391b7bbcba7e6b2941a6207d6c126 1071 SUPERFAMILY SSF53335 730 873 5.68E-17 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30425 493391b7bbcba7e6b2941a6207d6c126 1071 SUPERFAMILY SSF53335 654 691 5.68E-17 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30425 493391b7bbcba7e6b2941a6207d6c126 1071 SUPERFAMILY SSF53335 112 171 1.82E-6 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS08330 75e384a39d5d900455e72a2d0462d3d9 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 5 218 4.5E-60 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS08330 75e384a39d5d900455e72a2d0462d3d9 219 SUPERFAMILY SSF55120 8 217 1.04E-62 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS08330 75e384a39d5d900455e72a2d0462d3d9 219 Gene3D G3DSA:3.30.2350.10 14 218 3.8E-60 T 29-03-2018 CKQ55_RS08330 75e384a39d5d900455e72a2d0462d3d9 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS08330 75e384a39d5d900455e72a2d0462d3d9 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 5.3E-29 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 SUPERFAMILY SSF51161 312 411 2.02E-18 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 Pfam PF00483 Nucleotidyl transferase 22 291 4.3E-70 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 Gene3D G3DSA:2.160.10.10 335 419 1.2E-6 T 29-03-2018 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.579 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 SUPERFAMILY SSF53448 378 393 1.01E-77 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 SUPERFAMILY SSF53448 20 294 1.01E-77 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 Gene3D G3DSA:3.90.550.10 20 334 2.7E-66 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CKQ55_RS14940 a1eb98b5f111aaa265a7b8ae47300dd5 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.5E-156 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 Gene3D G3DSA:1.10.10.60 1 62 9.9E-18 T 29-03-2018 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 SMART SM00342 25 108 2.5E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 Gene3D G3DSA:1.10.10.60 63 126 6.8E-13 T 29-03-2018 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 SUPERFAMILY SSF46689 10 59 2.2E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 SUPERFAMILY SSF46689 62 109 5.38E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS26435 3af92582062655974e463848697e5e69 126 Pfam PF12833 Helix-turn-helix domain 32 108 2.2E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 SUPERFAMILY SSF82866 78 303 5.49E-41 T 29-03-2018 CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 1.1E-53 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.093 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 Pfam PF07549 SecD/SecF GG Motif 40 66 1.1E-11 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 Pfam PF02355 Protein export membrane protein 118 301 2.8E-68 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 3.4E-87 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CKQ55_RS06420 7af4820d75bd101172b21624ba579fe8 323 Gene3D G3DSA:1.20.1640.10 68 313 3.6E-33 T 29-03-2018 CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 PIRSF PIRSF002808 6 454 1.1E-108 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 Pfam PF07690 Major Facilitator Superfamily 34 402 2.1E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 Gene3D G3DSA:1.20.1250.20 245 458 8.5E-29 T 29-03-2018 CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 SUPERFAMILY SSF103473 12 439 1.7E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 419 1.4E-146 T 29-03-2018 CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CKQ55_RS27150 efe96db025bc2f6114342c8094ef975f 463 Gene3D G3DSA:1.20.1250.20 18 224 1.7E-35 T 29-03-2018 CKQ55_RS02210 5cacd6b02888ccebc6ab3892cc9279ef 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 2.9E-57 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CKQ55_RS02210 5cacd6b02888ccebc6ab3892cc9279ef 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 6 201 32.342 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CKQ55_RS02210 5cacd6b02888ccebc6ab3892cc9279ef 203 SUPERFAMILY SSF89392 22 202 4.32E-56 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CKQ55_RS02210 5cacd6b02888ccebc6ab3892cc9279ef 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 7.6E-117 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CKQ55_RS02210 5cacd6b02888ccebc6ab3892cc9279ef 203 Gene3D G3DSA:2.50.20.10 19 202 4.8E-40 T 29-03-2018 CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 Gene3D G3DSA:2.30.30.30 2 93 7.9E-30 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.855 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 SMART SM00739 4 31 9.8E-4 T 29-03-2018 IPR005824 KOW CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.6E-23 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 SUPERFAMILY SSF50104 4 100 1.08E-32 T 29-03-2018 IPR008991 Translation protein SH3-like domain CKQ55_RS15370 a87dcfe941bf871007656fd663a1862c 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 6.1E-39 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 Pfam PF00107 Zinc-binding dehydrogenase 161 298 7.4E-19 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 Gene3D G3DSA:3.90.180.10 2 160 2.6E-36 T 29-03-2018 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 SUPERFAMILY SSF50129 8 146 5.94E-43 T 29-03-2018 IPR011032 GroES-like CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 3.3E-41 T 29-03-2018 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 Gene3D G3DSA:3.90.180.10 246 343 2.9E-10 T 29-03-2018 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 SMART SM00829 23 339 1.3E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 Gene3D G3DSA:3.40.50.720 161 245 5.2E-13 T 29-03-2018 CKQ55_RS27930 55296a0c9880aaa5fb82b8698634bfb6 345 SUPERFAMILY SSF51735 127 306 1.97E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS06730 586bc75606fc660b8b55d5b32e75f0f1 462 Gene3D G3DSA:2.30.170.30 1 52 1.7E-24 T 29-03-2018 CKQ55_RS06730 586bc75606fc660b8b55d5b32e75f0f1 462 Gene3D G3DSA:3.20.20.70 142 448 4.2E-162 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS06730 586bc75606fc660b8b55d5b32e75f0f1 462 PIRSF PIRSF018788 1 456 9.7E-235 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS06730 586bc75606fc660b8b55d5b32e75f0f1 462 Gene3D G3DSA:1.10.220.70 55 139 1.3E-38 T 29-03-2018 CKQ55_RS06730 586bc75606fc660b8b55d5b32e75f0f1 462 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 11 444 1.5E-222 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS27650 9792a66039172335591c73206c9337c2 199 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 34 194 30.076 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS27650 9792a66039172335591c73206c9337c2 199 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 85 91 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS27650 9792a66039172335591c73206c9337c2 199 Pfam PF00719 Inorganic pyrophosphatase 38 194 4.5E-46 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS27650 9792a66039172335591c73206c9337c2 199 Gene3D G3DSA:3.90.80.10 20 199 6.4E-48 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS27650 9792a66039172335591c73206c9337c2 199 SUPERFAMILY SSF50324 29 195 2.88E-54 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS13925 812314f4b55818950dd2967552902865 466 Gene3D G3DSA:1.20.1250.20 229 444 1.2E-7 T 29-03-2018 CKQ55_RS13925 812314f4b55818950dd2967552902865 466 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 25 462 1.4E-100 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS13925 812314f4b55818950dd2967552902865 466 SUPERFAMILY SSF103473 28 406 2.49E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13925 812314f4b55818950dd2967552902865 466 Pfam PF13347 MFS/sugar transport protein 27 448 4.2E-82 T 29-03-2018 CKQ55_RS13925 812314f4b55818950dd2967552902865 466 Gene3D G3DSA:1.20.1250.20 27 224 3.8E-17 T 29-03-2018 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.268 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 SUPERFAMILY SSF52540 4 170 1.78E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 Pfam PF01202 Shikimate kinase 13 170 5.1E-56 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 Gene3D G3DSA:3.40.50.300 1 173 5.9E-37 T 29-03-2018 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.8E-29 T 29-03-2018 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.8E-29 T 29-03-2018 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.8E-29 T 29-03-2018 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.8E-29 T 29-03-2018 CKQ55_RS15060 39876a7b8788386f978268c1d8f01792 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.8E-29 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 707 5.0E-79 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF55008 51 112 6.02E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Pfam PF00403 Heavy-metal-associated domain 55 111 1.2E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 185 732 1.4E-160 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 ProSitePatterns PS01047 Heavy-metal-associated domain. 55 84 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 185 730 1.4E-176 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Pfam PF00122 E1-E2 ATPase 236 416 1.6E-46 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF56784 527 728 2.92E-50 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF56784 435 454 2.92E-50 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Gene3D G3DSA:3.40.1110.10 454 556 9.4E-28 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Gene3D G3DSA:3.30.70.100 47 118 1.0E-14 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 566 5.7E-28 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 285 299 5.7E-28 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 587 5.7E-28 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 450 5.7E-28 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 647 5.7E-28 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 663 5.7E-28 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Gene3D G3DSA:3.40.50.1000 557 695 4.9E-36 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 438 444 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Gene3D G3DSA:1.20.1110.10 128 453 7.8E-29 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF81665 187 239 3.92E-18 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF81665 677 716 3.92E-18 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF81665 336 430 3.92E-18 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 Pfam PF00702 haloacid dehalogenase-like hydrolase 435 641 8.1E-38 T 29-03-2018 CKQ55_RS14725 fba9ece775dfc0bcce48a52d71274e13 734 SUPERFAMILY SSF81653 238 335 9.15E-22 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 8.4E-58 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.981 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 SUPERFAMILY SSF100950 2 146 1.26E-46 T 29-03-2018 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 Gene3D G3DSA:3.30.70.260 138 196 1.1E-22 T 29-03-2018 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 SUPERFAMILY SSF75445 127 198 2.49E-23 T 29-03-2018 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.1E-69 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS17310 506618fe21a2a5bbb4c5c9940116cda4 219 Gene3D G3DSA:3.40.50.1360 1 137 1.9E-39 T 29-03-2018 CKQ55_RS24195 a1f349be5af934108e5a967aeff00ba1 379 Pfam PF07690 Major Facilitator Superfamily 19 341 1.9E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS24195 a1f349be5af934108e5a967aeff00ba1 379 Gene3D G3DSA:1.20.1250.20 3 193 7.7E-30 T 29-03-2018 CKQ55_RS24195 a1f349be5af934108e5a967aeff00ba1 379 SUPERFAMILY SSF103473 5 373 5.36E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS24195 a1f349be5af934108e5a967aeff00ba1 379 Gene3D G3DSA:1.20.1250.20 194 378 1.3E-9 T 29-03-2018 CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 SUPERFAMILY SSF55315 115 191 7.42E-10 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 SUPERFAMILY SSF75217 201 355 1.44E-39 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 Pfam PF00588 SpoU rRNA Methylase family 211 348 2.9E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 Gene3D G3DSA:3.40.1280.10 198 357 5.0E-39 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 Gene3D G3DSA:3.30.1330.30 109 191 7.1E-9 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 PIRSF PIRSF006280 2 357 4.6E-161 T 29-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 122 192 1.7E-12 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CKQ55_RS19885 eb3fa20432df4fb3e154b415150b1479 357 SMART SM00967 121 196 7.8E-9 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CKQ55_RS07565 843fb00be724077a297a323bc8276fde 161 PIRSF PIRSF002094 1 161 1.8E-50 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CKQ55_RS07565 843fb00be724077a297a323bc8276fde 161 Gene3D G3DSA:3.30.910.20 86 161 1.1E-13 T 29-03-2018 CKQ55_RS07565 843fb00be724077a297a323bc8276fde 161 SUPERFAMILY SSF111384 20 160 1.83E-31 T 29-03-2018 IPR024930 Skp domain CKQ55_RS07565 843fb00be724077a297a323bc8276fde 161 Gene3D G3DSA:3.30.910.20 10 85 6.9E-9 T 29-03-2018 CKQ55_RS07565 843fb00be724077a297a323bc8276fde 161 SMART SM00935 10 161 6.5E-38 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CKQ55_RS07565 843fb00be724077a297a323bc8276fde 161 Pfam PF03938 Outer membrane protein (OmpH-like) 8 159 2.3E-29 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 SUPERFAMILY SSF81340 7 428 4.84E-88 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 Gene3D G3DSA:1.10.3080.10 3 429 4.3E-76 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 PRINTS PR00762 Chloride channel signature 330 350 3.9E-19 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 PRINTS PR00762 Chloride channel signature 365 381 3.9E-19 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 PRINTS PR00762 Chloride channel signature 383 402 3.9E-19 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 PRINTS PR00762 Chloride channel signature 166 185 3.9E-19 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 PRINTS PR00762 Chloride channel signature 116 135 3.9E-19 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS26165 be9f3829343b4b86b0efabaca809b972 431 Pfam PF00654 Voltage gated chloride channel 78 415 7.2E-72 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 Gene3D G3DSA:3.40.190.10 180 265 8.0E-8 T 29-03-2018 CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 Gene3D G3DSA:1.10.10.10 4 84 4.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 4.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 Gene3D G3DSA:3.40.190.10 89 179 8.0E-9 T 29-03-2018 CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 SUPERFAMILY SSF46785 6 88 4.42E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 Pfam PF03466 LysR substrate binding domain 88 290 8.9E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS25580 fd4223d37f769a7d40a2657ac76ae6f0 303 SUPERFAMILY SSF53850 89 290 9.23E-27 T 29-03-2018 CKQ55_RS23925 b5841e493f611aeb9178f583c8410631 581 SUPERFAMILY SSF56601 180 568 1.42E-85 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS23925 b5841e493f611aeb9178f583c8410631 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 214 6.7E-17 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS23925 b5841e493f611aeb9178f583c8410631 581 Gene3D G3DSA:3.40.710.10 229 574 5.7E-79 T 29-03-2018 CKQ55_RS23925 b5841e493f611aeb9178f583c8410631 581 SUPERFAMILY SSF56519 56 227 3.66E-43 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS23925 b5841e493f611aeb9178f583c8410631 581 Gene3D G3DSA:3.90.1310.10 29 228 1.8E-42 T 29-03-2018 CKQ55_RS23925 b5841e493f611aeb9178f583c8410631 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 4.4E-76 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS19675 25d4edc6bd53a216af109d40d120e5f3 395 Gene3D G3DSA:1.10.443.10 211 389 1.7E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS19675 25d4edc6bd53a216af109d40d120e5f3 395 Pfam PF13356 Arm DNA-binding domain 9 92 5.0E-15 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CKQ55_RS19675 25d4edc6bd53a216af109d40d120e5f3 395 SUPERFAMILY SSF56349 109 386 7.06E-58 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS19675 25d4edc6bd53a216af109d40d120e5f3 395 Pfam PF00589 Phage integrase family 213 377 3.1E-27 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS19675 25d4edc6bd53a216af109d40d120e5f3 395 Gene3D G3DSA:1.10.150.130 101 210 7.0E-19 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 47 2.1E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 Gene3D G3DSA:3.40.50.2300 167 340 4.8E-32 T 29-03-2018 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 SMART SM00354 4 72 0.0037 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 Gene3D G3DSA:3.40.50.2300 64 166 1.2E-11 T 29-03-2018 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 Gene3D G3DSA:1.10.260.40 3 63 1.4E-13 T 29-03-2018 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 SUPERFAMILY SSF47413 5 58 1.59E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 Pfam PF13377 Periplasmic binding protein-like domain 173 337 1.0E-24 T 29-03-2018 CKQ55_RS03040 a2f6bac7942207f74d3f326d243f4cc9 357 SUPERFAMILY SSF53822 72 339 1.03E-40 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS19800 4bf12386cf23fa50b37b62a602887ad0 111 Gene3D G3DSA:3.30.160.100 2 92 7.8E-27 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS19800 4bf12386cf23fa50b37b62a602887ad0 111 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 3.6E-22 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS19800 4bf12386cf23fa50b37b62a602887ad0 111 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 5.3E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS19800 4bf12386cf23fa50b37b62a602887ad0 111 SUPERFAMILY SSF69754 3 105 3.66E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 SUPERFAMILY SSF48498 87 211 9.53E-42 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 Gene3D G3DSA:1.10.10.60 8 44 1.4E-10 T 29-03-2018 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 Gene3D G3DSA:1.10.260.40 45 74 7.7E-9 T 29-03-2018 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 SUPERFAMILY SSF46689 17 91 3.09E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 211 1.5E-58 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 5.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 5.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.0E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01085 83a83c7db35409ab64454c8aad7fdd2e 212 Gene3D G3DSA:1.10.357.10 75 212 9.2E-26 T 29-03-2018 CKQ55_RS19135 f144877b408d1bc3feb6b2377eb95480 480 Pfam PF02378 Phosphotransferase system, EIIC 113 396 4.9E-41 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS19135 f144877b408d1bc3feb6b2377eb95480 480 Pfam PF00367 phosphotransferase system, EIIB 10 43 9.6E-17 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS19135 f144877b408d1bc3feb6b2377eb95480 480 SUPERFAMILY SSF55604 8 82 1.44E-22 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS19135 f144877b408d1bc3feb6b2377eb95480 480 Gene3D G3DSA:3.30.1360.60 6 82 7.4E-29 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS19135 f144877b408d1bc3feb6b2377eb95480 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS27935 ab35431dfecf3f9be98be9f2919826c9 191 Gene3D G3DSA:2.60.120.10 75 190 9.8E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS27935 ab35431dfecf3f9be98be9f2919826c9 191 SUPERFAMILY SSF51182 55 186 4.45E-15 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS27935 ab35431dfecf3f9be98be9f2919826c9 191 Pfam PF01381 Helix-turn-helix 16 69 3.5E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27935 ab35431dfecf3f9be98be9f2919826c9 191 SMART SM00530 15 70 2.5E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27935 ab35431dfecf3f9be98be9f2919826c9 191 SUPERFAMILY SSF47413 8 74 2.2E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27935 ab35431dfecf3f9be98be9f2919826c9 191 Gene3D G3DSA:1.10.260.40 1 74 3.5E-18 T 29-03-2018 CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 SMART SM00487 143 324 0.0041 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 Gene3D G3DSA:3.40.50.300 354 621 1.2E-10 T 29-03-2018 CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 Gene3D G3DSA:3.40.50.300 144 310 1.7E-13 T 29-03-2018 CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 Pfam PF00270 DEAD/DEAH box helicase 148 280 1.4E-7 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 SUPERFAMILY SSF52540 144 295 3.84E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 Pfam PF00271 Helicase conserved C-terminal domain 432 510 2.5E-7 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 SUPERFAMILY SSF52540 369 525 9.84E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17010 b825a6c3234f68d23851a248278d3e6d 862 SMART SM00490 429 511 9.8E-9 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS05190 5209aeec8baf6abc148522ba8f40ca2b 275 SMART SM00849 55 252 9.2E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS05190 5209aeec8baf6abc148522ba8f40ca2b 275 SUPERFAMILY SSF56281 4 270 1.83E-44 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS05190 5209aeec8baf6abc148522ba8f40ca2b 275 Gene3D G3DSA:3.60.15.10 1 274 2.9E-47 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS05190 5209aeec8baf6abc148522ba8f40ca2b 275 Pfam PF00753 Metallo-beta-lactamase superfamily 59 252 1.2E-24 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 Gene3D G3DSA:3.40.50.720 7 187 1.5E-60 T 29-03-2018 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 Gene3D G3DSA:3.30.360.10 188 490 1.2E-125 T 29-03-2018 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 3.5E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 3.5E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 3.5E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 3.5E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 3.5E-47 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 SUPERFAMILY SSF51735 4 189 1.02E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.089 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 6.3E-204 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 PIRSF PIRSF000110 1 491 5.0E-180 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 SUPERFAMILY SSF55347 176 488 1.8E-112 T 29-03-2018 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 1.7E-57 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS23745 7f99205168d7b546348b2a97d4465b9c 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 5.6E-116 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CKQ55_RS29030 8fa820653b5df6b6f0608ddb4e3aa799 335 SMART SM00062 26 256 4.8E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS29030 8fa820653b5df6b6f0608ddb4e3aa799 335 Gene3D G3DSA:3.40.190.10 120 330 3.3E-31 T 29-03-2018 CKQ55_RS29030 8fa820653b5df6b6f0608ddb4e3aa799 335 Gene3D G3DSA:3.40.190.10 21 115 7.1E-12 T 29-03-2018 CKQ55_RS29030 8fa820653b5df6b6f0608ddb4e3aa799 335 Pfam PF09084 NMT1/THI5 like 54 245 2.5E-16 T 29-03-2018 IPR015168 SsuA/THI5-like CKQ55_RS29030 8fa820653b5df6b6f0608ddb4e3aa799 335 SUPERFAMILY SSF53850 25 246 3.52E-39 T 29-03-2018 CKQ55_RS18790 76bfff9539a0cbc08cc0ce688953b8cd 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 6.2E-12 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS18790 76bfff9539a0cbc08cc0ce688953b8cd 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 6.2E-12 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS18790 76bfff9539a0cbc08cc0ce688953b8cd 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 29-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 CKQ55_RS18790 76bfff9539a0cbc08cc0ce688953b8cd 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 7.0E-17 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS18790 76bfff9539a0cbc08cc0ce688953b8cd 50 Pfam PF01848 Hok/gef family 5 46 3.3E-19 T 29-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 3.5E-14 T 29-03-2018 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 4.7E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 4.7E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 4.7E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 SUPERFAMILY SSF54909 68 152 1.88E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 Gene3D G3DSA:1.10.10.10 1 57 3.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 SMART SM00344 6 113 1.2E-44 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 1.1E-17 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 Gene3D G3DSA:3.30.70.920 59 150 3.1E-20 T 29-03-2018 CKQ55_RS12880 8a9dd6549e69dfed7111cddff3f6c294 152 SUPERFAMILY SSF46785 4 66 1.03E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26955 dda5d5df8029bfa7471d0b49828bfc82 351 SUPERFAMILY SSF51735 307 337 3.38E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26955 dda5d5df8029bfa7471d0b49828bfc82 351 SUPERFAMILY SSF51735 6 273 3.38E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26955 dda5d5df8029bfa7471d0b49828bfc82 351 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 103 5.8E-10 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS26955 dda5d5df8029bfa7471d0b49828bfc82 351 Gene3D G3DSA:3.40.50.720 4 349 2.7E-32 T 29-03-2018 CKQ55_RS30790 7595275bd37696fed797a04c6df462e5 142 Pfam PF03230 Antirestriction protein 46 142 2.7E-24 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS30790 7595275bd37696fed797a04c6df462e5 142 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 44 142 2.0E-43 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 PRINTS PR01374 Gram-negative bacterial tonB protein signature 64 81 1.0E-15 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 PRINTS PR01374 Gram-negative bacterial tonB protein signature 45 63 1.0E-15 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 PRINTS PR01374 Gram-negative bacterial tonB protein signature 24 45 1.0E-15 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 30 101 5.3E-15 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 Gene3D G3DSA:3.30.1150.10 16 110 3.2E-15 T 29-03-2018 CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 29 90 9.1E-15 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CKQ55_RS20230 fc90a3b4daa5ea967ba8290e93757f93 125 SUPERFAMILY SSF74653 27 91 1.44E-17 T 29-03-2018 CKQ55_RS28250 103f10811635003ccb3b0421600e5ff2 550 SUPERFAMILY SSF103473 277 448 2.75E-18 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28250 103f10811635003ccb3b0421600e5ff2 550 SUPERFAMILY SSF103473 35 227 2.75E-18 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28250 103f10811635003ccb3b0421600e5ff2 550 SUPERFAMILY SSF103473 508 535 2.75E-18 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28250 103f10811635003ccb3b0421600e5ff2 550 Gene3D G3DSA:1.20.1250.20 32 230 9.5E-9 T 29-03-2018 CKQ55_RS28250 103f10811635003ccb3b0421600e5ff2 550 Pfam PF07690 Major Facilitator Superfamily 49 438 1.9E-9 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS28250 103f10811635003ccb3b0421600e5ff2 550 Gene3D G3DSA:1.20.1250.20 287 545 3.4E-7 T 29-03-2018 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 3.3E-154 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 Gene3D G3DSA:1.20.58.220 433 543 8.7E-9 T 29-03-2018 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 1.8E-127 T 29-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.9E-34 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 Pfam PF02690 Na+/Pi-cotransporter 158 249 1.7E-7 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 Gene3D G3DSA:1.20.58.220 322 432 2.0E-8 T 29-03-2018 CKQ55_RS11360 30d2a59a8ebfb183d7e59c62e0849e26 543 SUPERFAMILY SSF109755 320 531 1.67E-23 T 29-03-2018 CKQ55_RS02985 a7eb109ac70a4813aa71f6616dc8b679 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 2.0E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02985 a7eb109ac70a4813aa71f6616dc8b679 303 Gene3D G3DSA:1.10.3720.10 26 291 1.1E-44 T 29-03-2018 CKQ55_RS02985 a7eb109ac70a4813aa71f6616dc8b679 303 SUPERFAMILY SSF161098 96 286 4.58E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02985 a7eb109ac70a4813aa71f6616dc8b679 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 69 2.1E-13 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS09155 be41750297670426e4c3032979c7a728 220 Pfam PF01810 LysE type translocator 21 205 4.3E-25 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 SUPERFAMILY SSF53756 6 350 2.55E-130 T 29-03-2018 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 Gene3D G3DSA:3.40.50.2000 178 347 1.8E-31 T 29-03-2018 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.5E-48 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 Gene3D G3DSA:3.40.50.2000 1 177 6.2E-44 T 29-03-2018 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.27 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 348 1.7E-113 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CKQ55_RS08135 a7f7ba242fc7d11b3a86437a16efd8a8 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 343 2.2E-36 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 Gene3D G3DSA:3.40.50.620 3 204 1.7E-58 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 SUPERFAMILY SSF52374 6 331 2.04E-78 T 29-03-2018 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 Gene3D G3DSA:1.10.240.10 205 327 1.4E-28 T 29-03-2018 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 331 1.0E-70 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 2.4E-22 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 2.4E-22 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 146 167 2.4E-22 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 2.4E-22 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CKQ55_RS09400 edd0073906aeabca5e0a7f3cf345fd93 335 Pfam PF00579 tRNA synthetases class I (W and Y) 5 286 1.4E-54 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 SUPERFAMILY SSF55261 288 419 2.62E-47 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 4.4E-107 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 SUPERFAMILY SSF50249 1 105 4.38E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.9E-16 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 SUPERFAMILY SSF55681 420 583 3.06E-105 T 29-03-2018 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 SUPERFAMILY SSF55681 108 287 3.06E-105 T 29-03-2018 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 6.2E-277 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 Gene3D G3DSA:3.30.930.10 131 586 2.3E-101 T 29-03-2018 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.644 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 Gene3D G3DSA:2.40.50.140 1 107 2.0E-26 T 29-03-2018 CKQ55_RS23660 ceb076432af01b141bbd1fcc354ff5e6 595 Pfam PF02938 GAD domain 307 406 9.0E-32 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CKQ55_RS31495 186991221652414c770d9c0c818f90a4 248 Pfam PF01609 Transposase DDE domain 60 234 1.9E-32 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS31495 186991221652414c770d9c0c818f90a4 248 Pfam PF05598 Transposase domain (DUF772) 2 46 6.7E-7 T 29-03-2018 IPR008490 Transposase InsH, N-terminal CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 SUPERFAMILY SSF46785 4 82 1.97E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 Gene3D G3DSA:3.40.190.10 179 267 2.8E-25 T 29-03-2018 CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 SUPERFAMILY SSF53850 92 294 1.63E-41 T 29-03-2018 CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 Gene3D G3DSA:1.10.10.10 3 86 2.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 Gene3D G3DSA:3.40.190.10 90 178 7.8E-13 T 29-03-2018 CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 Pfam PF03466 LysR substrate binding domain 91 294 6.2E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS17545 b34afa657c8c8727c1e9c1e9ea1bf618 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.6E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS15200 086e5b4abd4444e70a85aacfe1f7d1e6 496 PIRSF PIRSF005943 1 496 1.4E-164 T 29-03-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 CKQ55_RS15200 086e5b4abd4444e70a85aacfe1f7d1e6 496 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 185 474 1.7E-44 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CKQ55_RS15200 086e5b4abd4444e70a85aacfe1f7d1e6 496 Gene3D G3DSA:3.20.140.10 1 468 2.4E-89 T 29-03-2018 CKQ55_RS15200 086e5b4abd4444e70a85aacfe1f7d1e6 496 SUPERFAMILY SSF51690 184 495 6.18E-34 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CKQ55_RS31775 08bcbe52442b9bf94337b7dac3f64933 234 Gene3D G3DSA:3.30.420.10 72 210 2.6E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31775 08bcbe52442b9bf94337b7dac3f64933 234 SUPERFAMILY SSF53098 75 191 3.98E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31775 08bcbe52442b9bf94337b7dac3f64933 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31775 08bcbe52442b9bf94337b7dac3f64933 234 Pfam PF13610 DDE domain 75 212 1.2E-48 T 29-03-2018 IPR032874 DDE domain CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Pfam PF13187 4Fe-4S dicluster domain 59 108 6.6E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Hamap MF_02059 Choline trimethylamine-lyase activating enzyme [cutD]. 4 315 55.109 T 29-03-2018 IPR030905 Choline TMA-lyase-activating enzyme CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Gene3D G3DSA:3.30.70.20 68 98 8.8E-12 T 29-03-2018 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 8 315 4.9E-126 T 29-03-2018 IPR030905 Choline TMA-lyase-activating enzyme CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 ProSitePatterns PS01087 Radical activating enzymes signature. 22 43 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 SUPERFAMILY SSF54862 9 158 1.05E-22 T 29-03-2018 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 SUPERFAMILY SSF102114 91 286 3.92E-13 T 29-03-2018 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 11 306 1.3E-111 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Gene3D G3DSA:3.30.70.20 99 147 7.9E-4 T 29-03-2018 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Gene3D G3DSA:3.30.70.20 30 67 2.3E-6 T 29-03-2018 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Pfam PF04055 Radical SAM superfamily 29 240 1.1E-22 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 PIRSF PIRSF000371 1 309 4.4E-96 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 Gene3D G3DSA:3.80.30.10 148 314 1.8E-29 T 29-03-2018 CKQ55_RS09355 6ee367d32f1f43a92cec0b481a03316f 315 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 42.742 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 Gene3D G3DSA:3.20.70.20 7 127 4.4E-30 T 29-03-2018 CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 PIRSF PIRSF000378 2 127 5.3E-55 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 Pfam PF01228 Glycine radical 16 108 5.2E-23 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 SUPERFAMILY SSF51998 46 125 1.69E-24 T 29-03-2018 CKQ55_RS19900 fc313b2c416e63b6a4cd617be955f77c 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 3.0E-69 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CKQ55_RS18475 a022b914b6960481a08b726a42b2567d 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 4.9E-127 T 29-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CKQ55_RS18475 a022b914b6960481a08b726a42b2567d 215 SUPERFAMILY SSF53639 1 212 4.71E-68 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS18475 a022b914b6960481a08b726a42b2567d 215 SMART SM01007 8 182 5.2E-68 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS18475 a022b914b6960481a08b726a42b2567d 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 59.949 T 29-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CKQ55_RS18475 a022b914b6960481a08b726a42b2567d 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 1.0E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS18475 a022b914b6960481a08b726a42b2567d 215 Gene3D G3DSA:3.40.225.10 1 213 3.3E-59 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS23490 8847f5e58e8a1e89648e95c24471ec00 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.2E-17 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CKQ55_RS23490 8847f5e58e8a1e89648e95c24471ec00 182 PIRSF PIRSF000847 1 177 1.3E-43 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CKQ55_RS23490 8847f5e58e8a1e89648e95c24471ec00 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CKQ55_RS23490 8847f5e58e8a1e89648e95c24471ec00 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.112 T 29-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CKQ55_RS23490 8847f5e58e8a1e89648e95c24471ec00 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 6.0E-63 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.936 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 Gene3D G3DSA:3.40.50.720 1 105 8.2E-22 T 29-03-2018 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 279 4.7E-19 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 Gene3D G3DSA:3.40.50.720 106 257 1.2E-32 T 29-03-2018 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 SUPERFAMILY SSF51735 91 257 1.53E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 256 3.7E-32 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 2.7E-29 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CKQ55_RS20915 df7b57a9a20aa9d386ad400c78a3602d 378 SUPERFAMILY SSF52283 4 110 3.61E-18 T 29-03-2018 CKQ55_RS05720 14ec23164352ff8cc8b7cd057e81f8d3 70 Gene3D G3DSA:3.10.290.10 1 70 1.7E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS05720 14ec23164352ff8cc8b7cd057e81f8d3 70 Pfam PF13275 S4 domain 9 68 6.3E-24 T 29-03-2018 CKQ55_RS05720 14ec23164352ff8cc8b7cd057e81f8d3 70 SUPERFAMILY SSF55174 8 68 4.19E-19 T 29-03-2018 CKQ55_RS21590 6f5f6dd88a237d38b95eea74ea88a6ad 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 8.3E-26 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CKQ55_RS21590 6f5f6dd88a237d38b95eea74ea88a6ad 75 SUPERFAMILY SSF158651 1 74 1.44E-31 T 29-03-2018 IPR023202 YejL-like domain CKQ55_RS21590 6f5f6dd88a237d38b95eea74ea88a6ad 75 Gene3D G3DSA:1.10.3390.10 2 71 2.9E-35 T 29-03-2018 IPR023202 YejL-like domain CKQ55_RS21590 6f5f6dd88a237d38b95eea74ea88a6ad 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.567 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CKQ55_RS21590 6f5f6dd88a237d38b95eea74ea88a6ad 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CKQ55_RS21590 6f5f6dd88a237d38b95eea74ea88a6ad 75 PIRSF PIRSF006188 1 72 8.6E-36 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CKQ55_RS24910 da94b63b09668f752e7222d2c5806fe7 315 SUPERFAMILY SSF49401 178 315 7.46E-22 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS24910 da94b63b09668f752e7222d2c5806fe7 315 Gene3D G3DSA:2.60.40.1090 173 315 1.7E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS24910 da94b63b09668f752e7222d2c5806fe7 315 Gene3D G3DSA:2.60.40.1090 26 172 0.67 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS24910 da94b63b09668f752e7222d2c5806fe7 315 Pfam PF00419 Fimbrial protein 171 315 2.2E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 PIRSF PIRSF005539 1 297 3.4E-125 T 29-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 SUPERFAMILY SSF53474 10 293 8.73E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 Gene3D G3DSA:3.40.50.1820 7 297 2.6E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 Pfam PF00561 alpha/beta hydrolase fold 30 281 4.3E-23 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 104 118 1.0E-10 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 31 39 1.0E-10 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 58 69 1.0E-10 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS22480 5f7ee96532305050e532648b358199a1 298 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 6 293 1.5E-75 T 29-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 SUPERFAMILY SSF52440 2 76 1.73E-15 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 Gene3D G3DSA:3.40.50.20 1 69 6.6E-17 T 29-03-2018 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 8.5E-114 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.262 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 SUPERFAMILY SSF51246 278 353 6.51E-21 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 Gene3D G3DSA:3.30.470.20 156 337 3.5E-32 T 29-03-2018 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 Pfam PF02222 ATP-grasp domain 88 254 1.8E-56 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 SUPERFAMILY SSF56059 79 274 1.69E-56 T 29-03-2018 CKQ55_RS05750 8f0e2408a266ba89975110f8b60c45ec 355 Gene3D G3DSA:3.30.1490.20 94 155 2.1E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS09750 32c7fb25f40fc6e37f152343b5308744 282 Gene3D G3DSA:3.40.190.10 27 140 5.5E-25 T 29-03-2018 CKQ55_RS09750 32c7fb25f40fc6e37f152343b5308744 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 268 5.1E-44 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS09750 32c7fb25f40fc6e37f152343b5308744 282 SUPERFAMILY SSF53850 12 269 7.85E-49 T 29-03-2018 CKQ55_RS09750 32c7fb25f40fc6e37f152343b5308744 282 Gene3D G3DSA:3.40.190.10 141 225 2.6E-16 T 29-03-2018 CKQ55_RS09750 32c7fb25f40fc6e37f152343b5308744 282 SMART SM00062 37 270 6.3E-43 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS09175 79b815c22f738edbf3c2a252c1e93dec 403 Pfam PF11922 Domain of unknown function (DUF3440) 352 384 6.7E-8 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 CKQ55_RS09175 79b815c22f738edbf3c2a252c1e93dec 403 Pfam PF11922 Domain of unknown function (DUF3440) 235 341 4.5E-26 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 CKQ55_RS09175 79b815c22f738edbf3c2a252c1e93dec 403 Gene3D G3DSA:3.40.50.620 1 402 8.5E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS09175 79b815c22f738edbf3c2a252c1e93dec 403 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 230 3.1E-17 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CKQ55_RS09175 79b815c22f738edbf3c2a252c1e93dec 403 SUPERFAMILY SSF52402 9 230 1.69E-37 T 29-03-2018 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 Pfam PF00376 MerR family regulatory protein 13 49 2.0E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 SMART SM00422 12 80 8.1E-23 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 Gene3D G3DSA:1.10.1660.10 67 142 6.1E-10 T 29-03-2018 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 1.2E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 1.2E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 1.2E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 Gene3D G3DSA:1.10.1660.10 8 66 9.2E-19 T 29-03-2018 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 151 8.7E-73 T 29-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 Pfam PF09278 MerR, DNA binding 55 119 3.2E-14 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding CKQ55_RS11020 0088f8f5a25d36c5fb3c727a6c1de5e2 152 SUPERFAMILY SSF46955 12 134 1.39E-27 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Pfam PF02811 PHP domain 8 170 1.2E-37 T 29-03-2018 IPR004013 PHP domain GO:0003824 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 SUPERFAMILY SSF89550 6 263 2.75E-14 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 SMART SM00481 7 74 1.0E-25 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Gene3D G3DSA:3.20.20.140 1 247 1.4E-36 T 29-03-2018 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 5.3E-25 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 734 4.5E-178 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Gene3D G3DSA:1.10.150.280 780 894 6.7E-9 T 29-03-2018 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Gene3D G3DSA:2.40.50.140 979 1074 5.2E-16 T 29-03-2018 CKQ55_RS07535 4607b04d42214c4883e65774b794d525 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 1.8E-8 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 161 217 2.9E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 Gene3D G3DSA:2.60.40.10 20 139 1.9E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 Gene3D G3DSA:2.60.40.10 141 228 2.0E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 SUPERFAMILY SSF49584 143 222 4.19E-21 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 139 1.6E-37 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 SUPERFAMILY SSF49354 15 138 2.2E-36 T 29-03-2018 IPR008962 PapD-like CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 PRINTS PR00969 Pili chaperone signature 120 135 4.2E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 PRINTS PR00969 Pili chaperone signature 156 171 4.2E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 PRINTS PR00969 Pili chaperone signature 21 30 4.2E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 PRINTS PR00969 Pili chaperone signature 95 112 4.2E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10975 9a90446d3d4b468308b1d4e8217cc7cc 228 PRINTS PR00969 Pili chaperone signature 67 88 4.2E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 PRINTS PR00969 Pili chaperone signature 163 178 1.5E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 PRINTS PR00969 Pili chaperone signature 73 94 1.5E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 PRINTS PR00969 Pili chaperone signature 27 36 1.5E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 PRINTS PR00969 Pili chaperone signature 126 141 1.5E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 PRINTS PR00969 Pili chaperone signature 103 120 1.5E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 Gene3D G3DSA:2.60.40.10 26 145 2.8E-33 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 Gene3D G3DSA:2.60.40.10 148 239 2.3E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 SUPERFAMILY SSF49354 26 144 9.16E-38 T 29-03-2018 IPR008962 PapD-like CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 227 1.7E-13 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 144 2.7E-36 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS18815 1490c6e0d246d05698eef84ee0a50470 247 SUPERFAMILY SSF49584 152 239 4.97E-21 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 SUPERFAMILY SSF54862 3 196 1.05E-68 T 29-03-2018 CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 1.1E-78 T 29-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 Gene3D G3DSA:3.30.70.20 119 201 4.2E-17 T 29-03-2018 CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 Gene3D G3DSA:3.30.70.20 81 118 6.0E-21 T 29-03-2018 CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0036 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 4.7E-28 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS02190 bcbf939e4ae30868bd1df416f25fb6de 205 Gene3D G3DSA:3.30.70.20 3 80 2.4E-18 T 29-03-2018 CKQ55_RS15445 5570f7f183ec92da3d453fe59dfdc07f 128 SUPERFAMILY SSF64263 1 118 3.53E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15445 5570f7f183ec92da3d453fe59dfdc07f 128 Gene3D G3DSA:3.90.1030.10 1 117 3.2E-50 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15445 5570f7f183ec92da3d453fe59dfdc07f 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15445 5570f7f183ec92da3d453fe59dfdc07f 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15445 5570f7f183ec92da3d453fe59dfdc07f 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15445 5570f7f183ec92da3d453fe59dfdc07f 128 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS09665 03e2eb1b0fbc7a5e1b6e8b1668c13fa9 322 Pfam PF13737 Transposase DDE domain 34 145 6.7E-44 T 29-03-2018 IPR025668 Transposase DDE domain CKQ55_RS21855 03e2eb1b0fbc7a5e1b6e8b1668c13fa9 322 Pfam PF13737 Transposase DDE domain 34 145 6.7E-44 T 29-03-2018 IPR025668 Transposase DDE domain CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 8.0E-137 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.365 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 SUPERFAMILY SSF51726 1 352 3.84E-122 T 29-03-2018 CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 Gene3D G3DSA:3.20.20.210 1 354 2.0E-109 T 29-03-2018 CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 4.0E-142 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CKQ55_RS11480 aa3ff492baa060740d8ad5def671b7c2 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CKQ55_RS12255 9a603c08e86a03e76d6cb85e1ed2e2c6 123 Gene3D G3DSA:1.20.1290.10 6 123 1.3E-36 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS12255 9a603c08e86a03e76d6cb85e1ed2e2c6 123 SUPERFAMILY SSF69118 3 121 1.92E-35 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS12255 9a603c08e86a03e76d6cb85e1ed2e2c6 123 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 5.6E-23 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS31770 13aa2043d538d515d84ffa48d68b2840 42 Pfam PF03091 CutA1 divalent ion tolerance protein 2 36 2.3E-8 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CKQ55_RS31770 13aa2043d538d515d84ffa48d68b2840 42 Gene3D G3DSA:3.30.70.120 1 42 2.3E-9 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CKQ55_RS31770 13aa2043d538d515d84ffa48d68b2840 42 SUPERFAMILY SSF54913 2 38 9.64E-10 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 Gene3D G3DSA:3.40.605.10 1 267 6.6E-108 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 5.1E-236 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 Gene3D G3DSA:3.40.309.10 268 465 8.0E-70 T 29-03-2018 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 58.127 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 SUPERFAMILY SSF53720 4 484 5.89E-174 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS04575 51d7f90ba149de7e27b5ccd069e45a23 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 3.7E-179 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS13525 7d8a56af2358890edd6dafe699159a80 363 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 9 335 1.8E-94 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CKQ55_RS13525 7d8a56af2358890edd6dafe699159a80 363 Pfam PF02378 Phosphotransferase system, EIIC 19 214 9.0E-10 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS04845 ecd9d9e84bdd411cbc5f48088035aa94 285 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 27 279 7.1E-70 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04845 ecd9d9e84bdd411cbc5f48088035aa94 285 Gene3D G3DSA:2.30.42.10 51 285 1.2E-9 T 29-03-2018 CKQ55_RS04845 ecd9d9e84bdd411cbc5f48088035aa94 285 Pfam PF11356 Type II secretion system protein C 27 169 1.2E-25 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal CKQ55_RS04845 ecd9d9e84bdd411cbc5f48088035aa94 285 SUPERFAMILY SSF50156 187 280 8.96E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 SUPERFAMILY SSF51338 2 64 1.03E-22 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 SUPERFAMILY SSF51338 495 544 1.03E-22 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 Gene3D G3DSA:2.30.40.10 4 84 6.9E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 SUPERFAMILY SSF51556 63 125 1.18E-43 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 SUPERFAMILY SSF51556 205 496 1.18E-43 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 Gene3D G3DSA:2.30.40.10 475 541 1.4E-5 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 Pfam PF07969 Amidohydrolase family 52 536 4.2E-123 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS06465 62abcbc309b40e773ab3398e30bbee9c 622 Gene3D G3DSA:3.20.20.140 189 474 3.3E-32 T 29-03-2018 CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 Pfam PF12833 Helix-turn-helix domain 254 329 4.1E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 Gene3D G3DSA:1.10.10.60 295 338 2.8E-9 T 29-03-2018 CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 Gene3D G3DSA:1.10.260.40 3 64 0.2 T 29-03-2018 CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 SUPERFAMILY SSF46689 283 333 2.82E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 202 9.3E-28 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 Gene3D G3DSA:1.10.10.10 228 294 6.3E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28770 0c9560b72de4812a5d4d270ee0e95f44 341 SMART SM00342 247 329 1.5E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01445 682d4b0145eaeecf684d941b14bf164d 111 Gene3D G3DSA:3.10.490.10 1 110 1.8E-19 T 29-03-2018 CKQ55_RS01445 682d4b0145eaeecf684d941b14bf164d 111 SUPERFAMILY SSF110857 1 107 1.15E-20 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CKQ55_RS01445 682d4b0145eaeecf684d941b14bf164d 111 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 107 5.5E-16 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 SMART SM00422 4 73 3.2E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.0E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 Gene3D G3DSA:1.10.1660.10 1 119 5.9E-19 T 29-03-2018 CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 SUPERFAMILY SSF46955 4 109 3.63E-17 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 3.9E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.9E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.9E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS02580 b7412a53294495e3dcd41fa330e79505 120 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 115 1.1E-57 T 29-03-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 CKQ55_RS14255 aa0437db4f2792526ed08f9e58c38f94 518 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 156 471 2.8E-124 T 29-03-2018 IPR017745 Cellulose biosynthesis protein BcsE CKQ55_RS14255 aa0437db4f2792526ed08f9e58c38f94 518 Pfam PF10995 GGDEF I-site like or GIL domain 161 470 2.0E-123 T 29-03-2018 IPR017745 Cellulose biosynthesis protein BcsE CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 SMART SM00062 27 256 1.6E-70 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 SUPERFAMILY SSF53850 1 256 3.88E-66 T 29-03-2018 CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 3.5E-99 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 8.5E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 Gene3D G3DSA:3.40.190.10 15 140 1.5E-36 T 29-03-2018 CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS20970 7070fbbefb5a8e1fcc779765e06a2eb7 260 Gene3D G3DSA:3.40.190.10 141 258 1.3E-15 T 29-03-2018 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 1.4E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 1.4E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 1.4E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 1.4E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 SMART SM00347 48 151 3.5E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 Pfam PF01047 MarR family 59 115 9.2E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 Gene3D G3DSA:1.10.10.10 3 168 7.7E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17810 754f69e74b2eab90b36bcd618950c196 168 SUPERFAMILY SSF46785 15 166 5.15E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07390 c99a5e1c5a507718b4fabf2a1d00013c 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 1.9E-7 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS07390 c99a5e1c5a507718b4fabf2a1d00013c 265 SUPERFAMILY SSF56219 44 260 1.96E-24 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS07390 c99a5e1c5a507718b4fabf2a1d00013c 265 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 52.624 T 29-03-2018 IPR022958 Uncharacterised protein family UPF0294 CKQ55_RS07390 c99a5e1c5a507718b4fabf2a1d00013c 265 Gene3D G3DSA:3.60.10.10 37 260 6.4E-16 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 265 3.5E-32 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 PIRSF PIRSF000538 5 535 2.5E-76 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 7 534 4.2E-229 T 29-03-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 Gene3D G3DSA:3.30.420.40 272 533 1.1E-55 T 29-03-2018 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 Gene3D G3DSA:3.30.420.40 3 266 1.6E-71 T 29-03-2018 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 SUPERFAMILY SSF53067 7 266 5.64E-64 T 29-03-2018 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 SUPERFAMILY SSF53067 372 529 6.62E-48 T 29-03-2018 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 SUPERFAMILY SSF53067 277 333 6.62E-48 T 29-03-2018 CKQ55_RS22125 f1bce0809ecb19ba46c8f3633dc1cdff 535 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 485 6.7E-47 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 SUPERFAMILY SSF52540 526 705 3.25E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 508 709 3.4E-47 T 29-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 Pfam PF02706 Chain length determinant protein 14 105 2.6E-24 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 Pfam PF13807 G-rich domain on putative tyrosine kinase 366 446 4.5E-33 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 Pfam PF13614 AAA domain 539 653 1.4E-11 T 29-03-2018 IPR025669 AAA domain CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 Gene3D G3DSA:3.30.1890.10 44 422 3.2E-77 T 29-03-2018 CKQ55_RS22605 1a687ebfef7a1d64cca6aad270d053e5 721 Gene3D G3DSA:3.40.50.300 521 711 1.4E-26 T 29-03-2018 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 SMART SM00871 126 288 2.0E-13 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 Gene3D G3DSA:3.20.80.10 122 289 1.1E-23 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 Gene3D G3DSA:1.10.10.60 1 57 2.3E-13 T 29-03-2018 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 SUPERFAMILY SSF55136 122 288 4.97E-48 T 29-03-2018 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 6.7E-19 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 Gene3D G3DSA:1.10.10.60 58 121 2.1E-12 T 29-03-2018 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 SUPERFAMILY SSF46689 57 109 7.47E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 SMART SM00342 21 104 4.8E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.6E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 SUPERFAMILY SSF46689 6 55 2.39E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS08715 a830a717f69450452aa28fad88971708 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS13990 90f67d21647efe586807c9fb69f0f19b 676 Gene3D G3DSA:3.20.20.80 184 647 3.0E-75 T 29-03-2018 CKQ55_RS13990 90f67d21647efe586807c9fb69f0f19b 676 Pfam PF00128 Alpha amylase, catalytic domain 226 594 8.1E-39 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS13990 90f67d21647efe586807c9fb69f0f19b 676 PIRSF PIRSF036917 1 676 0.0 T 29-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CKQ55_RS13990 90f67d21647efe586807c9fb69f0f19b 676 SMART SM00642 193 637 1.6E-77 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS13990 90f67d21647efe586807c9fb69f0f19b 676 SUPERFAMILY SSF51445 374 643 1.15E-74 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS13990 90f67d21647efe586807c9fb69f0f19b 676 SUPERFAMILY SSF51445 180 318 1.15E-74 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS20760 7315e3ec55fed83d2a9604d4f15467a9 330 SUPERFAMILY SSF51430 13 327 3.14E-91 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS20760 7315e3ec55fed83d2a9604d4f15467a9 330 Pfam PF00248 Aldo/keto reductase family 28 328 8.1E-68 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS20760 7315e3ec55fed83d2a9604d4f15467a9 330 Gene3D G3DSA:3.20.20.100 15 329 3.5E-90 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS24505 28fa6485b5ba311cdd40447ce6777bf7 459 Pfam PF11924 Inverse autotransporter, beta-domain 58 334 5.6E-100 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Pfam PF00158 Sigma-54 interaction domain 125 291 1.4E-46 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Pfam PF00874 PRD domain 494 580 1.0E-10 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Gene3D G3DSA:3.40.50.300 113 340 2.7E-17 T 29-03-2018 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Gene3D G3DSA:1.10.1790.10 845 950 1.3E-5 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Pfam PF03610 PTS system fructose IIA component 592 696 9.0E-13 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 SMART SM00382 148 302 3.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 SUPERFAMILY SSF63520 846 949 4.58E-8 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 SUPERFAMILY SSF53062 590 708 4.71E-18 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Gene3D G3DSA:1.10.10.10 1 74 7.5E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Gene3D G3DSA:3.40.50.510 577 728 2.1E-26 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 SUPERFAMILY SSF63520 484 582 6.41E-13 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 SUPERFAMILY SSF52540 122 397 1.42E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Gene3D G3DSA:1.10.1790.10 454 576 6.8E-14 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS04900 8e7c26e2a35e30101121ada40c91472d 958 Gene3D G3DSA:3.40.50.2300 729 825 0.0049 T 29-03-2018 CKQ55_RS00620 8397907101d89aa9f555e3edc2ca284f 264 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 255 32.979 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS00620 8397907101d89aa9f555e3edc2ca284f 264 Gene3D G3DSA:3.20.20.70 1 263 6.9E-83 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS00620 8397907101d89aa9f555e3edc2ca284f 264 SUPERFAMILY SSF51351 1 255 1.15E-78 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS00620 8397907101d89aa9f555e3edc2ca284f 264 Pfam PF00121 Triosephosphate isomerase 5 252 2.2E-81 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS00620 8397907101d89aa9f555e3edc2ca284f 264 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 242 1.3E-41 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS12775 c1167c7691342f064d209a4644a52e20 299 Pfam PF01553 Acyltransferase 75 198 7.5E-12 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS12775 c1167c7691342f064d209a4644a52e20 299 SUPERFAMILY SSF69593 19 290 1.44E-27 T 29-03-2018 CKQ55_RS12775 c1167c7691342f064d209a4644a52e20 299 Gene3D G3DSA:3.40.1130.10 52 299 9.1E-20 T 29-03-2018 CKQ55_RS12775 c1167c7691342f064d209a4644a52e20 299 SMART SM00563 88 215 8.6E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 Gene3D G3DSA:2.60.15.10 1 90 8.9E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 2.7E-13 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 6.0E-40 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.1E-29 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.508 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.8E-46 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 SUPERFAMILY SSF46604 88 137 1.83E-15 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 SUPERFAMILY SSF51344 3 86 1.44E-24 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12940 ed95fc5b06d93767698c15cbf3d21802 139 Gene3D G3DSA:1.20.5.440 91 131 1.8E-13 T 29-03-2018 CKQ55_RS21835 118f873849a9121a6a077d4f523cf00e 232 SUPERFAMILY SSF56529 23 232 1.1E-64 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS21835 118f873849a9121a6a077d4f523cf00e 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 231 1.5E-49 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS21835 118f873849a9121a6a077d4f523cf00e 232 Gene3D G3DSA:3.90.850.10 3 232 1.7E-70 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS25780 0ace649d0552b837de2dd5c90ab390eb 271 Pfam PF03180 NLPA lipoprotein 33 271 4.3E-93 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS25780 0ace649d0552b837de2dd5c90ab390eb 271 Gene3D G3DSA:3.40.190.10 32 128 4.0E-22 T 29-03-2018 CKQ55_RS25780 0ace649d0552b837de2dd5c90ab390eb 271 SUPERFAMILY SSF53850 33 271 5.5E-77 T 29-03-2018 CKQ55_RS25780 0ace649d0552b837de2dd5c90ab390eb 271 Gene3D G3DSA:3.40.190.10 129 271 7.2E-48 T 29-03-2018 CKQ55_RS25780 0ace649d0552b837de2dd5c90ab390eb 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 271 5.7E-124 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS25780 0ace649d0552b837de2dd5c90ab390eb 271 PIRSF PIRSF002854 1 271 4.7E-97 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS19380 fb0a76a0c97ffcc7dcb1b25dbcca688d 136 Gene3D G3DSA:3.40.50.360 3 131 1.4E-26 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS19380 fb0a76a0c97ffcc7dcb1b25dbcca688d 136 Pfam PF07972 NrdI Flavodoxin like 5 122 3.0E-47 T 29-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CKQ55_RS19380 fb0a76a0c97ffcc7dcb1b25dbcca688d 136 PIRSF PIRSF005087 1 136 2.3E-55 T 29-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CKQ55_RS19380 fb0a76a0c97ffcc7dcb1b25dbcca688d 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 7.5E-58 T 29-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CKQ55_RS19380 fb0a76a0c97ffcc7dcb1b25dbcca688d 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 37.037 T 29-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CKQ55_RS19380 fb0a76a0c97ffcc7dcb1b25dbcca688d 136 SUPERFAMILY SSF52218 1 131 1.0E-23 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS17945 337142bab248ef45ec7c2468de5fbb26 428 Gene3D G3DSA:3.40.190.10 25 236 1.7E-34 T 29-03-2018 CKQ55_RS17945 337142bab248ef45ec7c2468de5fbb26 428 Pfam PF01547 Bacterial extracellular solute-binding protein 45 331 1.3E-29 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CKQ55_RS17945 337142bab248ef45ec7c2468de5fbb26 428 SUPERFAMILY SSF53850 23 425 3.57E-62 T 29-03-2018 CKQ55_RS17945 337142bab248ef45ec7c2468de5fbb26 428 Gene3D G3DSA:3.40.190.10 237 420 1.4E-5 T 29-03-2018 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Gene3D G3DSA:2.40.30.20 3 82 3.3E-27 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 SUPERFAMILY SSF47917 383 511 6.8E-46 T 29-03-2018 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Gene3D G3DSA:3.40.50.300 83 375 2.5E-112 T 29-03-2018 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Gene3D G3DSA:1.20.150.20 384 510 1.9E-46 T 29-03-2018 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 SUPERFAMILY SSF52540 96 381 2.66E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-12 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.5E-45 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.5E-261 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.823 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.6E-73 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS12925 86e70d58a438155e5a684db847a98a66 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CKQ55_RS21890 98de5fc7f52e5115fb36a8519f08d04e 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 1.7E-45 T 29-03-2018 IPR009698 Protein of unknown function DUF1282 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 137 6.9E-35 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 Gene3D G3DSA:3.40.30.10 32 141 2.7E-32 T 29-03-2018 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 SUPERFAMILY SSF52833 26 137 9.68E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 PIRSF PIRSF000077 36 138 5.1E-31 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 PRINTS PR00421 Thioredoxin family signature 55 63 9.9E-9 T 29-03-2018 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 PRINTS PR00421 Thioredoxin family signature 103 114 9.9E-9 T 29-03-2018 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 PRINTS PR00421 Thioredoxin family signature 63 72 9.9E-9 T 29-03-2018 CKQ55_RS19880 dd9a678035054b8b56063f2641dd455c 141 Pfam PF00085 Thioredoxin 38 137 1.5E-26 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 Gene3D G3DSA:3.40.50.300 283 530 3.9E-49 T 29-03-2018 CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 SMART SM00382 26 228 3.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 SMART SM00382 344 512 2.6E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 SUPERFAMILY SSF52540 6 237 1.45E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 Pfam PF00005 ABC transporter 336 467 3.5E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 Pfam PF00005 ABC transporter 18 184 1.3E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 Gene3D G3DSA:3.40.50.300 3 282 1.6E-51 T 29-03-2018 CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 SUPERFAMILY SSF52540 298 523 4.74E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03055 2f98a5b30b542a3ac2c000cd810d4a4e 530 Pfam PF12848 ABC transporter 224 309 8.4E-21 T 29-03-2018 IPR032781 ABC-transporter extension domain CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 Gene3D G3DSA:2.40.170.20 182 749 3.7E-84 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 Gene3D G3DSA:2.170.130.10 47 181 1.7E-34 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 SUPERFAMILY SSF56935 39 749 2.23E-133 T 29-03-2018 CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 168 4.7E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 Pfam PF00593 TonB dependent receptor 278 746 4.4E-56 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 749 5.6E-143 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS04490 df9129fd45344ce204662c46ff9f62fd 749 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 732 749 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS05690 1652e216f7d9828bb65d4e6eb3f89e6f 72 SUPERFAMILY SSF57716 34 70 4.56E-6 T 29-03-2018 CKQ55_RS05690 1652e216f7d9828bb65d4e6eb3f89e6f 72 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 4 64 1.9E-17 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type CKQ55_RS05690 1652e216f7d9828bb65d4e6eb3f89e6f 72 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 6.0E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 SUPERFAMILY SSF52096 17 280 3.84E-79 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 3.7E-79 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 Gene3D G3DSA:3.90.226.10 8 224 1.3E-64 T 29-03-2018 CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.471 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 Gene3D G3DSA:1.10.12.10 225 273 3.4E-13 T 29-03-2018 IPR014748 Crontonase, C-terminal CKQ55_RS21240 2065adde11f70488338a942d8f327713 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 7.6E-151 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CKQ55_RS25745 084a45d8613f87f8154ff76c0086ae9f 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.453 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CKQ55_RS25745 084a45d8613f87f8154ff76c0086ae9f 193 PIRSF PIRSF006102 1 193 4.8E-59 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS25745 084a45d8613f87f8154ff76c0086ae9f 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.3E-91 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CKQ55_RS25745 084a45d8613f87f8154ff76c0086ae9f 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 7.8E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS30880 785e4aa16ef68aacc8ff06ad9a9065b2 210 SUPERFAMILY SSF52540 1 186 7.39E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30880 785e4aa16ef68aacc8ff06ad9a9065b2 210 Gene3D G3DSA:3.40.50.300 1 55 1.6E-8 T 29-03-2018 CKQ55_RS30880 785e4aa16ef68aacc8ff06ad9a9065b2 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 115 1.4E-6 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CKQ55_RS30880 785e4aa16ef68aacc8ff06ad9a9065b2 210 Gene3D G3DSA:3.40.50.300 56 210 2.0E-13 T 29-03-2018 CKQ55_RS30880 785e4aa16ef68aacc8ff06ad9a9065b2 210 PIRSF PIRSF009320 2 210 3.2E-24 T 29-03-2018 CKQ55_RS20090 7431245062aa6a0209b94791ae608ed2 425 Gene3D G3DSA:1.10.1790.10 231 333 7.9E-12 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS20090 7431245062aa6a0209b94791ae608ed2 425 Gene3D G3DSA:1.10.1790.10 123 222 0.19 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS20090 7431245062aa6a0209b94791ae608ed2 425 Pfam PF00874 PRD domain 241 328 1.9E-10 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS20090 7431245062aa6a0209b94791ae608ed2 425 SUPERFAMILY SSF63520 232 332 1.15E-14 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 145 828 6.3E-301 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 SUPERFAMILY SSF53448 272 550 9.57E-49 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 SUPERFAMILY SSF141371 695 782 5.1E-8 T 29-03-2018 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 SUPERFAMILY SSF103473 9 64 8.5E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 SUPERFAMILY SSF103473 134 260 8.5E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 Pfam PF00535 Glycosyl transferase family 2 276 446 3.8E-34 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 Gene3D G3DSA:2.40.10.220 690 798 1.0E-14 T 29-03-2018 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 Pfam PF07238 PilZ domain 694 790 8.3E-12 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 3.5E-54 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CKQ55_RS14270 938fb86c07325237f9669313be2e45aa 873 Gene3D G3DSA:3.90.550.10 273 510 2.6E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 SUPERFAMILY SSF81901 80 215 4.05E-15 T 29-03-2018 CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 Gene3D G3DSA:1.25.40.10 21 84 4.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 Gene3D G3DSA:2.60.40.1180 85 167 1.4E-6 T 29-03-2018 CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 Gene3D G3DSA:2.60.40.1180 168 220 3.5E-4 T 29-03-2018 CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 Pfam PF08238 Sel1 repeat 34 64 0.027 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 Pfam PF08238 Sel1 repeat 141 172 0.2 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 Pfam PF08238 Sel1 repeat 178 210 0.0034 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 SMART SM00671 140 175 0.014 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 SMART SM00671 33 64 0.0073 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 SMART SM00671 65 99 320.0 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 SMART SM00671 177 214 0.013 T 29-03-2018 IPR006597 Sel1-like repeat CKQ55_RS10925 c5813a849cfde24e682409996d1b337f 227 SUPERFAMILY SSF81901 24 74 1.96E-9 T 29-03-2018 CKQ55_RS30845 0a323bc143d246fef812f8483f56fb61 83 SUPERFAMILY SSF143120 12 68 9.59E-6 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CKQ55_RS30845 0a323bc143d246fef812f8483f56fb61 83 Gene3D G3DSA:3.40.1620.10 9 69 2.5E-6 T 29-03-2018 CKQ55_RS30845 0a323bc143d246fef812f8483f56fb61 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 72 2.9E-6 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 SMART SM00382 42 225 1.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 SUPERFAMILY SSF50331 250 364 7.37E-7 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 7.0E-164 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 Gene3D G3DSA:3.40.50.300 13 256 9.3E-75 T 29-03-2018 CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 SUPERFAMILY SSF52540 17 258 1.5E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 Pfam PF08402 TOBE domain 292 372 7.3E-8 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS00560 cac963e493799eb86518c99056fcc729 378 Pfam PF00005 ABC transporter 34 174 4.2E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS17420 ed028187d8db83c29703d075cf03a53d 161 SUPERFAMILY SSF52728 3 161 1.7E-44 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS17420 ed028187d8db83c29703d075cf03a53d 161 Pfam PF03830 PTS system sorbose subfamily IIB component 4 150 1.0E-42 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS17420 ed028187d8db83c29703d075cf03a53d 161 Gene3D G3DSA:3.40.35.10 3 159 2.5E-46 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS17660 9988492e8860fd6371561ed4b28abba8 385 Gene3D G3DSA:1.10.10.60 284 348 2.0E-4 T 29-03-2018 CKQ55_RS17660 9988492e8860fd6371561ed4b28abba8 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 311 367 1.9E-12 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CKQ55_RS17660 9988492e8860fd6371561ed4b28abba8 385 Pfam PF05651 Putative sugar diacid recognition 4 134 1.9E-41 T 29-03-2018 IPR008599 Putative sugar diacid recognition CKQ55_RS17660 9988492e8860fd6371561ed4b28abba8 385 Gene3D G3DSA:3.30.450.40 12 120 0.0059 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 Pfam PF04715 Anthranilate synthase component I, N terminal region 21 151 2.2E-26 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 105 445 6.5E-135 T 29-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 PRINTS PR00095 Anthranilate synthase component I signature 398 412 9.4E-19 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 PRINTS PR00095 Anthranilate synthase component I signature 289 302 9.4E-19 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 PRINTS PR00095 Anthranilate synthase component I signature 303 316 9.4E-19 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 PRINTS PR00095 Anthranilate synthase component I signature 383 397 9.4E-19 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 SUPERFAMILY SSF56322 4 449 8.9E-147 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 Gene3D G3DSA:3.60.120.10 3 451 6.6E-156 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS23985 2003fd7a7a2640a6e2e1e0ea5f19b786 451 Pfam PF00425 chorismate binding enzyme 187 441 8.9E-93 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CKQ55_RS25340 40055330b2b29667b1f0c12d65a24dd9 259 SUPERFAMILY SSF117856 28 258 5.75E-87 T 29-03-2018 CKQ55_RS25340 40055330b2b29667b1f0c12d65a24dd9 259 Gene3D G3DSA:3.30.1330.80 26 116 2.5E-35 T 29-03-2018 CKQ55_RS25340 40055330b2b29667b1f0c12d65a24dd9 259 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 28 256 3.2E-87 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CKQ55_RS25340 40055330b2b29667b1f0c12d65a24dd9 259 PIRSF PIRSF001332 10 259 2.8E-97 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CKQ55_RS25340 40055330b2b29667b1f0c12d65a24dd9 259 Gene3D G3DSA:3.30.1330.80 117 223 3.4E-44 T 29-03-2018 CKQ55_RS25340 40055330b2b29667b1f0c12d65a24dd9 259 Pfam PF03306 Alpha-acetolactate decarboxylase 29 246 4.6E-84 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 CKQ55_RS27490 2b5d5c8d8fc3f5665e4d27a35ed80b3c 230 SMART SM00873 61 217 4.4E-14 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CKQ55_RS27490 2b5d5c8d8fc3f5665e4d27a35ed80b3c 230 Pfam PF03483 B3/4 domain 63 191 1.7E-16 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CKQ55_RS27490 2b5d5c8d8fc3f5665e4d27a35ed80b3c 230 Gene3D G3DSA:3.50.40.10 57 202 9.2E-21 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CKQ55_RS27490 2b5d5c8d8fc3f5665e4d27a35ed80b3c 230 SUPERFAMILY SSF56037 49 208 5.49E-24 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 Gene3D G3DSA:3.90.1150.10 384 481 1.9E-13 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 Gene3D G3DSA:1.10.10.10 9 88 3.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 Gene3D G3DSA:3.40.640.10 136 383 5.2E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 SUPERFAMILY SSF53383 114 478 3.93E-80 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 83 1.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 SUPERFAMILY SSF46785 21 90 1.26E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 Pfam PF00155 Aminotransferase class I and II 147 428 4.5E-20 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 SMART SM00345 28 86 2.1E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 1.4E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS05985 5b36035ebaca125b5b8dda55747b7dc8 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 1.4E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS23740 03645c71f40d24b69ef972d12c9acf38 289 SUPERFAMILY SSF46689 1 78 2.33E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS23740 03645c71f40d24b69ef972d12c9acf38 289 Pfam PF01380 SIS domain 124 252 4.3E-28 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS23740 03645c71f40d24b69ef972d12c9acf38 289 Gene3D G3DSA:1.10.10.10 1 92 2.8E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23740 03645c71f40d24b69ef972d12c9acf38 289 Gene3D G3DSA:3.40.50.10490 93 283 4.1E-37 T 29-03-2018 CKQ55_RS23740 03645c71f40d24b69ef972d12c9acf38 289 SUPERFAMILY SSF53697 94 278 8.42E-43 T 29-03-2018 CKQ55_RS23740 03645c71f40d24b69ef972d12c9acf38 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 8.6E-31 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 Pfam PF00005 ABC transporter 285 442 3.5E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 Pfam PF00005 ABC transporter 33 182 6.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 SMART SM00382 42 230 2.9E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 SMART SM00382 294 491 4.0E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 SUPERFAMILY SSF52540 16 237 3.62E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 Gene3D G3DSA:3.40.50.300 14 241 7.6E-54 T 29-03-2018 CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 Gene3D G3DSA:3.40.50.300 265 507 1.3E-40 T 29-03-2018 CKQ55_RS04535 350d0b4703043960e314abef7d3e5d6e 514 SUPERFAMILY SSF52540 258 501 1.36E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 Gene3D G3DSA:3.20.20.140 82 253 1.6E-9 T 29-03-2018 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 Hamap MF_01518 Adenine deaminase [ade]. 22 582 29.828 T 29-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 Pfam PF01979 Amidohydrolase family 72 355 4.2E-19 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 Gene3D G3DSA:2.30.40.10 267 366 5.3E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 SUPERFAMILY SSF51338 13 76 1.53E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 SUPERFAMILY SSF51338 326 369 1.53E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 Gene3D G3DSA:2.30.40.10 19 81 1.4E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 SUPERFAMILY SSF51556 76 326 1.61E-20 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS21995 f2e1c2f508d07ef7c6f3f1d84afa1779 603 Pfam PF13382 Adenine deaminase C-terminal domain 412 578 6.0E-41 T 29-03-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CKQ55_RS21055 1de98664704ab28e96324a6be35b41c4 276 Gene3D G3DSA:3.40.50.970 1 274 6.5E-66 T 29-03-2018 CKQ55_RS21055 1de98664704ab28e96324a6be35b41c4 276 SUPERFAMILY SSF52518 3 265 3.63E-79 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS21055 1de98664704ab28e96324a6be35b41c4 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 259 3.6E-49 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS06850 b51a38a9f58f4bbf90039c90ecfb3053 220 Gene3D G3DSA:3.40.50.1000 80 219 9.0E-11 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS06850 b51a38a9f58f4bbf90039c90ecfb3053 220 SUPERFAMILY SSF56784 2 202 1.6E-25 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS06850 b51a38a9f58f4bbf90039c90ecfb3053 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 188 4.7E-31 T 29-03-2018 CKQ55_RS06850 b51a38a9f58f4bbf90039c90ecfb3053 220 Gene3D G3DSA:1.20.1440.100 18 79 4.6E-21 T 29-03-2018 CKQ55_RS06850 b51a38a9f58f4bbf90039c90ecfb3053 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 203 1.2E-45 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CKQ55_RS06850 b51a38a9f58f4bbf90039c90ecfb3053 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 3.8E-25 T 29-03-2018 CKQ55_RS06805 08f5b4303570c732c2755cf58ba08267 222 SUPERFAMILY SSF49354 18 114 3.14E-5 T 29-03-2018 IPR008962 PapD-like CKQ55_RS06805 08f5b4303570c732c2755cf58ba08267 222 Gene3D G3DSA:2.60.40.10 21 146 1.1E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS15670 38dcbd5e6a2fbc2194d469286c9a80ef 489 SUPERFAMILY SSF50249 39 127 4.15E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS15670 38dcbd5e6a2fbc2194d469286c9a80ef 489 SMART SM00316 37 122 1.4E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS15670 38dcbd5e6a2fbc2194d469286c9a80ef 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.9E-178 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CKQ55_RS15670 38dcbd5e6a2fbc2194d469286c9a80ef 489 Gene3D G3DSA:2.40.50.140 32 127 1.6E-30 T 29-03-2018 CKQ55_RS15670 38dcbd5e6a2fbc2194d469286c9a80ef 489 Pfam PF00575 S1 RNA binding domain 38 109 2.4E-6 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS15670 38dcbd5e6a2fbc2194d469286c9a80ef 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.0E-101 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 SUPERFAMILY SSF51445 247 594 1.51E-70 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Pfam PF13802 Galactose mutarotase-like 146 213 3.9E-24 T 29-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Gene3D G3DSA:2.60.40.1180 617 679 1.1E-22 T 29-03-2018 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Pfam PF01055 Glycosyl hydrolases family 31 238 681 4.7E-116 T 29-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Gene3D G3DSA:2.60.40.1180 680 784 2.0E-9 T 29-03-2018 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 SUPERFAMILY SSF74650 2 243 4.39E-49 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Pfam PF17137 Domain of unknown function (DUF5110) 713 766 3.2E-6 T 29-03-2018 IPR033403 Domain of unknown function DUF5110 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Gene3D G3DSA:2.60.40.1760 7 243 1.2E-46 T 29-03-2018 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 SUPERFAMILY SSF51011 597 678 1.73E-18 T 29-03-2018 CKQ55_RS03050 1c23528b7b9bdd5d30e2b76c98d76fff 787 Gene3D G3DSA:3.20.20.80 244 616 2.5E-105 T 29-03-2018 CKQ55_RS15570 56eccb2d5588a632e2e9c18934ca1c53 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 369 2.5E-85 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS15570 56eccb2d5588a632e2e9c18934ca1c53 379 Pfam PF00529 HlyD membrane-fusion protein of T1SS 69 354 1.0E-12 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS15570 56eccb2d5588a632e2e9c18934ca1c53 379 SUPERFAMILY SSF111369 50 294 1.2E-85 T 29-03-2018 CKQ55_RS15570 56eccb2d5588a632e2e9c18934ca1c53 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 287 1.0E-14 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS15570 56eccb2d5588a632e2e9c18934ca1c53 379 Gene3D G3DSA:1.20.1600.10 25 293 3.2E-31 T 29-03-2018 CKQ55_RS10165 b6dbdb3f0addcdf539ba0e35566d873b 246 SUPERFAMILY SSF51569 52 205 1.34E-6 T 29-03-2018 CKQ55_RS10165 b6dbdb3f0addcdf539ba0e35566d873b 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 3.6E-123 T 29-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS10165 b6dbdb3f0addcdf539ba0e35566d873b 246 Pfam PF07071 KDGP aldolase 8 225 1.1E-111 T 29-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS10165 b6dbdb3f0addcdf539ba0e35566d873b 246 Gene3D G3DSA:3.20.20.70 4 245 7.9E-120 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS28315 7465ff9756ab9b4e12051f74a092713b 262 Gene3D G3DSA:3.90.226.10 1 222 4.8E-66 T 29-03-2018 CKQ55_RS28315 7465ff9756ab9b4e12051f74a092713b 262 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 5 262 1.7E-136 T 29-03-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 CKQ55_RS28315 7465ff9756ab9b4e12051f74a092713b 262 Gene3D G3DSA:1.10.12.10 223 262 1.8E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal CKQ55_RS28315 7465ff9756ab9b4e12051f74a092713b 262 SUPERFAMILY SSF52096 4 261 2.99E-84 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS28315 7465ff9756ab9b4e12051f74a092713b 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 261 9.3E-61 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CKQ55_RS13900 f997fabbee4708c9d55ee5924e8ab047 378 SUPERFAMILY SSF111369 198 325 1.16E-14 T 29-03-2018 CKQ55_RS13900 f997fabbee4708c9d55ee5924e8ab047 378 SUPERFAMILY SSF111369 60 165 1.16E-14 T 29-03-2018 CKQ55_RS13900 f997fabbee4708c9d55ee5924e8ab047 378 Gene3D G3DSA:2.40.50.100 63 137 1.3E-12 T 29-03-2018 CKQ55_RS13900 f997fabbee4708c9d55ee5924e8ab047 378 Pfam PF13437 HlyD family secretion protein 221 309 8.3E-5 T 29-03-2018 CKQ55_RS13900 f997fabbee4708c9d55ee5924e8ab047 378 Gene3D G3DSA:2.40.50.100 212 357 3.3E-6 T 29-03-2018 CKQ55_RS13900 f997fabbee4708c9d55ee5924e8ab047 378 Pfam PF13533 Biotin-lipoyl like 64 110 3.9E-13 T 29-03-2018 CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 Gene3D G3DSA:3.40.1190.20 1 315 4.6E-64 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 PRINTS PR00990 Ribokinase signature 224 235 3.8E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 PRINTS PR00990 Ribokinase signature 185 200 3.8E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 PRINTS PR00990 Ribokinase signature 36 55 3.8E-6 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 Pfam PF00294 pfkB family carbohydrate kinase 5 300 1.4E-68 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS29840 e11f8956753d41fd9d8e75d1aee0c032 315 SUPERFAMILY SSF53613 1 300 1.15E-68 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 SUPERFAMILY SSF116842 3 74 7.72E-22 T 29-03-2018 CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 PIRSF PIRSF006488 1 80 1.5E-23 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 Gene3D G3DSA:1.10.287.1040 8 75 6.4E-26 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.609 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 6.8E-24 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 5.0E-18 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS06340 41c6549788feac51b5aad49b8dadcaf9 80 Pfam PF02609 Exonuclease VII small subunit 11 62 6.4E-21 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS10120 a048c4f32c95c44047015c5b1c0dc82d 247 Gene3D G3DSA:3.40.50.10490 117 246 5.7E-8 T 29-03-2018 CKQ55_RS10120 a048c4f32c95c44047015c5b1c0dc82d 247 SUPERFAMILY SSF46689 1 77 8.96E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10120 a048c4f32c95c44047015c5b1c0dc82d 247 SUPERFAMILY SSF53697 112 245 6.35E-8 T 29-03-2018 CKQ55_RS10120 a048c4f32c95c44047015c5b1c0dc82d 247 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 74 8.7E-13 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS10120 a048c4f32c95c44047015c5b1c0dc82d 247 Gene3D G3DSA:1.10.10.10 1 116 3.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02425 e20ac489d3111def1503f6b12d4ac6f8 240 Pfam PF00881 Nitroreductase family 9 159 4.4E-18 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CKQ55_RS02425 e20ac489d3111def1503f6b12d4ac6f8 240 PIRSF PIRSF005426 1 240 1.5E-82 T 29-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CKQ55_RS02425 e20ac489d3111def1503f6b12d4ac6f8 240 Gene3D G3DSA:3.40.109.10 1 240 1.9E-58 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS02425 e20ac489d3111def1503f6b12d4ac6f8 240 SUPERFAMILY SSF55469 1 239 1.31E-72 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS17015 fc8a84fd2eae505f72a840cfa7ed9306 297 Pfam PF08878 Domain of unknown function (DUF1837) 44 279 1.3E-58 T 29-03-2018 IPR014976 Protein of unknown function DUF1837 CKQ55_RS22095 58e6d9beea3ce080f3eec58658615530 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.0E-105 T 29-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22095 58e6d9beea3ce080f3eec58658615530 266 Gene3D G3DSA:3.40.1190.20 2 266 4.7E-63 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS22095 58e6d9beea3ce080f3eec58658615530 266 SUPERFAMILY SSF53613 5 265 1.25E-79 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS22095 58e6d9beea3ce080f3eec58658615530 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 1.1E-93 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 8.8E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 Gene3D G3DSA:3.40.50.1000 87 225 3.7E-33 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 194 5.6E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 SUPERFAMILY SSF56784 3 222 1.62E-48 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 Gene3D G3DSA:1.10.150.240 15 86 4.2E-18 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 2.1E-73 T 29-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CKQ55_RS08825 0e39f26a8c87f5d231bdf56e79199eb4 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 81 194 8.3E-21 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13610 98527347e995c630f458daa473489356 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.456 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS13610 98527347e995c630f458daa473489356 255 Gene3D G3DSA:3.20.20.70 1 255 2.4E-100 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS13610 98527347e995c630f458daa473489356 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS13610 98527347e995c630f458daa473489356 255 Pfam PF00121 Triosephosphate isomerase 5 246 4.9E-93 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS13610 98527347e995c630f458daa473489356 255 SUPERFAMILY SSF51351 1 248 2.62E-91 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS13610 98527347e995c630f458daa473489356 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.5E-104 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS07055 78356c9f6acabf98a5f5dba178cc4ee5 455 SUPERFAMILY SSF51338 362 435 2.59E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS07055 78356c9f6acabf98a5f5dba178cc4ee5 455 Pfam PF01979 Amidohydrolase family 48 430 8.8E-30 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS07055 78356c9f6acabf98a5f5dba178cc4ee5 455 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 2 454 4.0E-202 T 29-03-2018 IPR010252 Formiminoglutamate deiminase CKQ55_RS07055 78356c9f6acabf98a5f5dba178cc4ee5 455 Gene3D G3DSA:2.30.40.10 365 436 8.6E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS07055 78356c9f6acabf98a5f5dba178cc4ee5 455 Gene3D G3DSA:3.20.20.140 48 364 2.4E-41 T 29-03-2018 CKQ55_RS07055 78356c9f6acabf98a5f5dba178cc4ee5 455 SUPERFAMILY SSF51556 51 376 6.32E-68 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS27915 f16c7a3166a8b6a040b0ca60e33b4adc 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 149 1.2E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27915 f16c7a3166a8b6a040b0ca60e33b4adc 698 Gene3D G3DSA:2.40.170.20 157 694 7.7E-81 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27915 f16c7a3166a8b6a040b0ca60e33b4adc 698 Gene3D G3DSA:2.170.130.10 19 155 2.3E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27915 f16c7a3166a8b6a040b0ca60e33b4adc 698 Pfam PF00593 TonB dependent receptor 234 693 4.6E-56 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27915 f16c7a3166a8b6a040b0ca60e33b4adc 698 SUPERFAMILY SSF56935 24 695 2.2E-119 T 29-03-2018 CKQ55_RS12795 930aca5a18ee2ad595cee72080dd3cdf 193 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 189 28.215 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CKQ55_RS12795 930aca5a18ee2ad595cee72080dd3cdf 193 Pfam PF12804 MobA-like NTP transferase domain 8 158 1.4E-31 T 29-03-2018 IPR025877 MobA-like NTP transferase CKQ55_RS12795 930aca5a18ee2ad595cee72080dd3cdf 193 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 6 187 5.1E-66 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CKQ55_RS12795 930aca5a18ee2ad595cee72080dd3cdf 193 Gene3D G3DSA:3.90.550.10 1 191 2.9E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS12795 930aca5a18ee2ad595cee72080dd3cdf 193 SUPERFAMILY SSF53448 6 187 1.46E-33 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.6E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 Gene3D G3DSA:3.40.50.720 47 248 4.3E-58 T 29-03-2018 CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 Gene3D G3DSA:3.40.50.720 1 46 2.3E-12 T 29-03-2018 CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 5.0E-69 T 29-03-2018 CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 SUPERFAMILY SSF51735 4 246 2.82E-81 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28440 812b98145d2dc1858377eeee13370028 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0033 T 29-03-2018 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 Pfam PF01569 PAP2 superfamily 129 229 1.2E-15 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 67 86 1.3E-59 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 224 242 1.3E-59 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 190 214 1.3E-59 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 132 150 1.3E-59 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 158 184 1.3E-59 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 Gene3D G3DSA:1.20.144.10 19 248 1.3E-44 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 PIRSF PIRSF000897 1 248 1.1E-108 T 29-03-2018 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 SUPERFAMILY SSF48317 20 246 1.31E-49 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 SMART SM00014 115 227 3.1E-32 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29800 37a7d1839547f3f001f14463e7151de4 248 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 162 169 - T 29-03-2018 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 SMART SM00382 34 234 7.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 1.0E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 317 7.7E-26 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 Gene3D G3DSA:3.40.50.300 2 324 4.6E-78 T 29-03-2018 CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 Pfam PF00005 ABC transporter 26 184 1.1E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS25420 50d6f44dfddcd58a5d2bdd3acc7b0fc0 326 SUPERFAMILY SSF52540 5 255 4.51E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 8.2E-133 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.209 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 Pfam PF13360 PQQ-like domain 78 319 7.5E-52 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 Gene3D G3DSA:2.130.10.10 323 392 0.021 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 155 186 3.6E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 289 320 230.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 114 146 7.2E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 329 361 4.4E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 251 282 6.4E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 64 96 2.0E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SMART SM00564 200 231 85.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 Gene3D G3DSA:2.140.10.10 190 322 1.0E-17 T 29-03-2018 CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 Gene3D G3DSA:2.140.10.10 28 189 5.2E-30 T 29-03-2018 CKQ55_RS20220 6d121bca66c2b84482a9c675a5bd87dd 392 SUPERFAMILY SSF50998 25 386 9.28E-78 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Pfam PF00364 Biotin-requiring enzyme 1137 1196 3.9E-13 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Gene3D G3DSA:3.30.1360.40 784 879 3.1E-24 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Gene3D G3DSA:2.40.50.100 1126 1200 1.5E-18 T 29-03-2018 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF51230 1125 1196 1.16E-17 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 7.1E-60 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 801 1019 1.4E-45 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF50891 915 1046 4.55E-24 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 4.8E-41 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SMART SM00878 338 446 1.0E-45 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SMART SM00797 477 768 2.7E-157 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF160467 801 891 1.29E-16 T 29-03-2018 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF52440 1 112 2.81E-42 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Gene3D G3DSA:3.30.1490.20 130 201 7.1E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 454 772 4.8E-85 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Gene3D G3DSA:2.40.100.10 886 1048 3.1E-48 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Gene3D G3DSA:3.40.50.20 1 129 7.6E-46 T 29-03-2018 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Gene3D G3DSA:3.30.470.20 203 448 5.7E-87 T 29-03-2018 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF56059 83 354 4.6E-66 T 29-03-2018 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1196 0.0 T 29-03-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Pfam PF02785 Biotin carboxylase C-terminal domain 338 447 6.1E-30 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SMART SM00796 798 1030 2.6E-106 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 478 750 2.6E-83 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF50891 632 755 1.67E-30 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CKQ55_RS27455 066f86144083201ae57e91f0d7861d18 1201 SUPERFAMILY SSF51246 332 448 1.52E-33 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 Pfam PF00459 Inositol monophosphatase family 2 259 5.4E-75 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 Gene3D G3DSA:3.30.540.10 1 145 4.3E-50 T 29-03-2018 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 9.8E-61 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 9.8E-61 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 9.8E-61 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 9.8E-61 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 9.8E-61 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 9.8E-61 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 SUPERFAMILY SSF56655 1 262 4.84E-87 T 29-03-2018 CKQ55_RS20105 0dbd5803d1b3e9e783dc8429bdbe4135 267 Gene3D G3DSA:3.40.190.80 146 267 7.2E-37 T 29-03-2018 CKQ55_RS16725 5257c58386dbe2d4568ef4ade54c7635 432 SMART SM01118 2 202 8.7E-42 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CKQ55_RS16725 5257c58386dbe2d4568ef4ade54c7635 432 Pfam PF01928 CYTH domain 3 196 1.2E-32 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CKQ55_RS16725 5257c58386dbe2d4568ef4ade54c7635 432 SUPERFAMILY SSF55154 1 218 6.87E-50 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CKQ55_RS16725 5257c58386dbe2d4568ef4ade54c7635 432 Gene3D G3DSA:2.40.320.10 1 210 3.5E-47 T 29-03-2018 CKQ55_RS06305 d973b50f72eed5dba4a497ebed5baaac 466 SUPERFAMILY SSF103473 21 451 1.44E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06305 d973b50f72eed5dba4a497ebed5baaac 466 Gene3D G3DSA:1.20.1250.20 230 449 1.1E-18 T 29-03-2018 CKQ55_RS06305 d973b50f72eed5dba4a497ebed5baaac 466 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 23 460 7.1E-91 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS06305 d973b50f72eed5dba4a497ebed5baaac 466 Gene3D G3DSA:1.20.1250.20 21 228 1.6E-14 T 29-03-2018 CKQ55_RS06305 d973b50f72eed5dba4a497ebed5baaac 466 Pfam PF13347 MFS/sugar transport protein 26 448 4.8E-83 T 29-03-2018 CKQ55_RS20350 81714c371f268c02c2c89dcdc322af2e 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 1.1E-130 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS20350 81714c371f268c02c2c89dcdc322af2e 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS20350 81714c371f268c02c2c89dcdc322af2e 429 Pfam PF00860 Permease family 16 383 7.9E-108 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 SUPERFAMILY SSF161098 261 503 6.54E-61 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 Gene3D G3DSA:2.40.430.10 119 196 7.6E-30 T 29-03-2018 CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 299 501 2.8E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 Gene3D G3DSA:1.20.58.370 4 95 4.6E-31 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 2.9E-60 T 29-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 SUPERFAMILY SSF160964 15 260 9.55E-88 T 29-03-2018 CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 Gene3D G3DSA:1.10.3720.10 270 514 4.8E-43 T 29-03-2018 CKQ55_RS11210 446b01a7207fe29b5ac125af418f52e7 514 Gene3D G3DSA:3.10.650.10 197 268 1.4E-26 T 29-03-2018 CKQ55_RS22785 dce6fd9539cf7e6c1889a4b8c3467ea1 167 Pfam PF04891 NifQ 7 166 1.1E-43 T 29-03-2018 IPR006975 NifQ GO:0009399|GO:0030151 CKQ55_RS27710 dac9003afc6facf6e0f82c7a7301d206 218 SUPERFAMILY SSF81342 3 211 1.02E-55 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CKQ55_RS27710 dac9003afc6facf6e0f82c7a7301d206 218 Gene3D G3DSA:1.20.950.20 1 217 3.9E-56 T 29-03-2018 CKQ55_RS27710 dac9003afc6facf6e0f82c7a7301d206 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 2.0E-70 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CKQ55_RS27710 dac9003afc6facf6e0f82c7a7301d206 218 Pfam PF01292 Prokaryotic cytochrome b561 13 186 1.9E-18 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 SUPERFAMILY SSF48498 81 197 4.08E-6 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 Gene3D G3DSA:1.10.10.60 3 60 1.4E-14 T 29-03-2018 CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 SUPERFAMILY SSF46689 5 80 1.07E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.2E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS27365 e4426eb8949e3d39b82632a97c607823 205 Gene3D G3DSA:1.10.357.10 63 205 1.8E-18 T 29-03-2018 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 Gene3D G3DSA:3.40.50.2000 465 779 4.8E-132 T 29-03-2018 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 PIRSF PIRSF000460 1 796 7.2E-205 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 Gene3D G3DSA:3.40.50.2000 1 464 9.0E-171 T 29-03-2018 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 SUPERFAMILY SSF53756 4 794 1.57E-293 T 29-03-2018 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 793 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS14985 9c6f8053bcf56567cf733c6a26eab575 796 Pfam PF00343 Carbohydrate phosphorylase 93 793 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CKQ55_RS29600 3211aef4ed2d15acc7a14687a732c9bd 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 166 4.0E-75 T 29-03-2018 CKQ55_RS29600 3211aef4ed2d15acc7a14687a732c9bd 178 Pfam PF14002 YniB-like protein 15 177 1.6E-79 T 29-03-2018 IPR025229 YniB-like protein CKQ55_RS06590 28f5a97533d2cfb40101313136b9d0b5 428 Gene3D G3DSA:1.20.1250.20 3 208 4.4E-34 T 29-03-2018 CKQ55_RS06590 28f5a97533d2cfb40101313136b9d0b5 428 Gene3D G3DSA:1.20.1250.20 223 423 2.8E-29 T 29-03-2018 CKQ55_RS06590 28f5a97533d2cfb40101313136b9d0b5 428 Pfam PF07690 Major Facilitator Superfamily 19 377 1.9E-58 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS06590 28f5a97533d2cfb40101313136b9d0b5 428 SUPERFAMILY SSF103473 6 412 6.02E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS14835 a68356cc746c98d338d3f3385226358e 436 Pfam PF07690 Major Facilitator Superfamily 27 388 6.3E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14835 a68356cc746c98d338d3f3385226358e 436 Gene3D G3DSA:1.20.1250.20 11 221 6.5E-35 T 29-03-2018 CKQ55_RS14835 a68356cc746c98d338d3f3385226358e 436 Gene3D G3DSA:1.20.1250.20 234 429 1.3E-14 T 29-03-2018 CKQ55_RS14835 a68356cc746c98d338d3f3385226358e 436 SUPERFAMILY SSF103473 13 423 4.58E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS04310 5ad6739eff777545219ba7757a9aeff0 203 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 8.2E-41 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS04310 5ad6739eff777545219ba7757a9aeff0 203 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 9 199 4.4E-66 T 29-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 CKQ55_RS04310 5ad6739eff777545219ba7757a9aeff0 203 SUPERFAMILY SSF53639 2 198 2.75E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS04310 5ad6739eff777545219ba7757a9aeff0 203 SMART SM01007 7 195 3.0E-47 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS04310 5ad6739eff777545219ba7757a9aeff0 203 Gene3D G3DSA:3.40.225.10 1 202 3.2E-45 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS04310 5ad6739eff777545219ba7757a9aeff0 203 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 203 116.7 T 29-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 CKQ55_RS11675 90510ca9c8e73aea138098efd89666e7 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.432 T 29-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 CKQ55_RS11675 90510ca9c8e73aea138098efd89666e7 443 Pfam PF00557 Metallopeptidase family M24 168 430 2.2E-43 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS11675 90510ca9c8e73aea138098efd89666e7 443 Gene3D G3DSA:3.90.230.10 145 442 1.2E-50 T 29-03-2018 CKQ55_RS11675 90510ca9c8e73aea138098efd89666e7 443 SUPERFAMILY SSF55920 163 438 8.77E-54 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS11675 90510ca9c8e73aea138098efd89666e7 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CKQ55_RS10720 6ee2a8386aa7e57d13bac714d9b567f8 419 PIRSF PIRSF006060 1 414 3.9E-54 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS10720 6ee2a8386aa7e57d13bac714d9b567f8 419 Pfam PF13520 Amino acid permease 8 406 7.1E-30 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS29940 72c854580a70fc3641dd48886794011d 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 17 130 5.0E-38 T 29-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CKQ55_RS29940 72c854580a70fc3641dd48886794011d 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 4.3E-46 T 29-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CKQ55_RS29940 72c854580a70fc3641dd48886794011d 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.744 T 29-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 Gene3D G3DSA:2.40.50.100 42 106 7.0E-17 T 29-03-2018 CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 Gene3D G3DSA:1.10.287.470 170 192 0.047 T 29-03-2018 CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 32 318 3.1E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 SUPERFAMILY SSF111369 177 325 7.59E-13 T 29-03-2018 CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 Gene3D G3DSA:1.10.287.470 110 169 1.1E-11 T 29-03-2018 CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 Gene3D G3DSA:1.20.1600.10 193 316 4.4E-15 T 29-03-2018 CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 SUPERFAMILY SSF111369 40 98 1.09E-9 T 29-03-2018 CKQ55_RS03225 645ec852d99648cd5d2ec8dc673c5094 330 SUPERFAMILY SSF111369 112 169 5.89E-5 T 29-03-2018 CKQ55_RS16005 33661da9c78d2da7589be326909fc086 321 SUPERFAMILY SSF103481 42 143 3.14E-12 T 29-03-2018 CKQ55_RS16005 33661da9c78d2da7589be326909fc086 321 Pfam PF00892 EamA-like transporter family 7 142 5.5E-27 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS16005 33661da9c78d2da7589be326909fc086 321 Pfam PF00892 EamA-like transporter family 159 291 5.3E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS01435 5237986011809bc048ea186a9ba9e29d 240 Gene3D G3DSA:3.40.30.10 71 240 4.2E-33 T 29-03-2018 CKQ55_RS01435 5237986011809bc048ea186a9ba9e29d 240 Pfam PF13462 Thioredoxin 81 234 1.7E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS01435 5237986011809bc048ea186a9ba9e29d 240 SUPERFAMILY SSF52833 71 234 3.62E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS01435 5237986011809bc048ea186a9ba9e29d 240 ProSitePatterns PS00194 Thioredoxin family active site. 94 112 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS20345 aff595ffaebc7d8c80b0d198c603c7e0 208 Gene3D G3DSA:3.40.50.2020 1 206 3.6E-60 T 29-03-2018 CKQ55_RS20345 aff595ffaebc7d8c80b0d198c603c7e0 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.458 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CKQ55_RS20345 aff595ffaebc7d8c80b0d198c603c7e0 208 SUPERFAMILY SSF53271 4 206 3.54E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS20345 aff595ffaebc7d8c80b0d198c603c7e0 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.7E-90 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CKQ55_RS20345 aff595ffaebc7d8c80b0d198c603c7e0 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.9E-65 T 29-03-2018 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 Gene3D G3DSA:3.50.50.60 384 553 7.8E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 Gene3D G3DSA:3.50.50.60 2 374 2.3E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 SUPERFAMILY SSF51905 1 279 1.82E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 SUPERFAMILY SSF51905 490 531 1.82E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 512 527 4.1E-7 T 29-03-2018 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.1E-7 T 29-03-2018 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 SUPERFAMILY SSF56425 325 496 1.53E-32 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS06275 bb8b45f94af800540ad9e006c2f1aded 557 Pfam PF00890 FAD binding domain 5 537 7.3E-92 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS19355 6d6addf2784b7b77077155d152955657 331 Gene3D G3DSA:3.40.190.10 156 326 3.2E-37 T 29-03-2018 CKQ55_RS19355 6d6addf2784b7b77077155d152955657 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 313 8.5E-57 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CKQ55_RS19355 6d6addf2784b7b77077155d152955657 331 SUPERFAMILY SSF53850 24 329 1.21E-97 T 29-03-2018 CKQ55_RS19355 6d6addf2784b7b77077155d152955657 331 Gene3D G3DSA:3.40.190.10 22 155 1.2E-16 T 29-03-2018 CKQ55_RS03665 92fb80c40e8e7772ae7b213e553a9dcb 333 Gene3D G3DSA:3.40.710.10 23 332 9.8E-111 T 29-03-2018 CKQ55_RS03665 92fb80c40e8e7772ae7b213e553a9dcb 333 Pfam PF04960 Glutaminase 46 330 5.0E-104 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CKQ55_RS03665 92fb80c40e8e7772ae7b213e553a9dcb 333 SUPERFAMILY SSF56601 28 330 2.77E-104 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS03665 92fb80c40e8e7772ae7b213e553a9dcb 333 TIGRFAM TIGR03814 Gln_ase: glutaminase A 37 330 1.8E-105 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CKQ55_RS03665 92fb80c40e8e7772ae7b213e553a9dcb 333 Hamap MF_00313 Glutaminase [glsA]. 28 330 40.127 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CKQ55_RS11100 d86353bc447e79b819bc3d40f81b5c45 237 Gene3D G3DSA:3.40.50.1000 27 237 5.7E-40 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11100 d86353bc447e79b819bc3d40f81b5c45 237 PIRSF PIRSF017818 1 237 1.5E-121 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS11100 d86353bc447e79b819bc3d40f81b5c45 237 SUPERFAMILY SSF56784 31 237 3.1E-76 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11100 d86353bc447e79b819bc3d40f81b5c45 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 11 220 1.2E-44 T 29-03-2018 IPR005519 Acid phosphatase, class B-like CKQ55_RS11100 d86353bc447e79b819bc3d40f81b5c45 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 2.4E-115 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 Gene3D G3DSA:3.40.50.300 12 289 8.5E-57 T 29-03-2018 CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 SUPERFAMILY SSF52540 11 243 8.34E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.6E-294 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 Gene3D G3DSA:3.40.50.300 290 551 2.1E-56 T 29-03-2018 CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 SMART SM00382 348 522 7.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 SMART SM00382 31 236 6.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 Pfam PF00005 ABC transporter 340 473 1.1E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 Pfam PF00005 ABC transporter 22 191 8.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 Pfam PF12848 ABC transporter 230 306 3.4E-12 T 29-03-2018 IPR032781 ABC-transporter extension domain CKQ55_RS08740 376438649587c75b50255f566c94cd46 555 SUPERFAMILY SSF52540 302 526 7.7E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12425 0838f15876aa9095a723b94c3270fa3b 562 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 119 132 - T 29-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CKQ55_RS12425 0838f15876aa9095a723b94c3270fa3b 562 Gene3D G3DSA:2.60.120.560 446 553 2.5E-5 T 29-03-2018 CKQ55_RS12425 0838f15876aa9095a723b94c3270fa3b 562 SMART SM00640 119 526 9.6E-61 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CKQ55_RS12425 0838f15876aa9095a723b94c3270fa3b 562 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 119 428 2.2E-72 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CKQ55_RS12425 0838f15876aa9095a723b94c3270fa3b 562 Gene3D G3DSA:2.115.10.20 91 445 4.6E-73 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS12425 0838f15876aa9095a723b94c3270fa3b 562 SUPERFAMILY SSF75005 110 428 3.93E-79 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.4E-128 T 29-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 SUPERFAMILY SSF51735 6 252 1.25E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.5E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.5E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.5E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 Pfam PF00106 short chain dehydrogenase 11 202 1.7E-56 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 Gene3D G3DSA:3.40.50.720 46 253 9.2E-60 T 29-03-2018 CKQ55_RS29610 07dadc3333cc2148d8e052d6fd091d8e 253 Gene3D G3DSA:3.40.50.720 3 45 1.5E-5 T 29-03-2018 CKQ55_RS05245 54f77aff3ab3a4ef2ee9fba67baa8634 996 Gene3D G3DSA:1.20.120.330 19 164 0.011 T 29-03-2018 CKQ55_RS05245 54f77aff3ab3a4ef2ee9fba67baa8634 996 Gene3D G3DSA:1.20.120.330 272 494 0.0016 T 29-03-2018 CKQ55_RS05245 54f77aff3ab3a4ef2ee9fba67baa8634 996 Pfam PF06120 Tail length tape measure protein 197 520 1.2E-6 T 29-03-2018 IPR009302 Tail length tape measure CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 Gene3D G3DSA:3.40.50.300 328 571 5.5E-69 T 29-03-2018 CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 SUPERFAMILY SSF52540 336 570 2.01E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 Pfam PF00005 ABC transporter 356 502 7.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 SMART SM00382 365 549 8.4E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 SUPERFAMILY SSF90123 5 327 3.27E-47 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 Pfam PF00664 ABC transporter transmembrane region 25 287 3.1E-13 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 533 2.9E-176 T 29-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CKQ55_RS02240 9508531504e96298fbe6f4c124cad83e 573 Gene3D G3DSA:1.20.1560.10 1 327 1.9E-37 T 29-03-2018 CKQ55_RS19155 e299ea5ad53e7988bccb8f602f05261c 337 Pfam PF03824 High-affinity nickel-transport protein 41 325 2.9E-89 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CKQ55_RS19155 e299ea5ad53e7988bccb8f602f05261c 337 Gene3D G3DSA:1.20.1070.10 79 335 0.0013 T 29-03-2018 CKQ55_RS19155 e299ea5ad53e7988bccb8f602f05261c 337 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 45 320 2.3E-119 T 29-03-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 SUPERFAMILY SSF81593 286 435 1.41E-45 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 SUPERFAMILY SSF81301 524 814 4.58E-90 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 SUPERFAMILY SSF81593 816 942 9.42E-34 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Gene3D G3DSA:1.10.4050.10 527 636 4.0E-24 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Gene3D G3DSA:1.10.4050.10 1 109 2.0E-18 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Pfam PF08335 GlnD PII-uridylyltransferase 824 916 7.9E-13 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Pfam PF08335 GlnD PII-uridylyltransferase 296 435 4.1E-46 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 26 944 20.162 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Gene3D G3DSA:1.20.120.330 811 944 7.6E-39 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Gene3D G3DSA:3.30.460.10 637 810 1.1E-60 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Gene3D G3DSA:3.30.460.10 111 283 2.8E-58 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 552 804 3.5E-102 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 31 275 2.6E-97 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 Gene3D G3DSA:1.20.120.330 284 439 1.3E-49 T 29-03-2018 CKQ55_RS16730 f7ad5e404eec17c03f25ac55b8632315 944 SUPERFAMILY SSF81301 24 285 1.63E-88 T 29-03-2018 CKQ55_RS29060 75c8d26103722804b78620925f03065c 288 SUPERFAMILY SSF161098 82 269 2.22E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29060 75c8d26103722804b78620925f03065c 288 Gene3D G3DSA:1.10.3720.10 35 283 3.3E-22 T 29-03-2018 CKQ55_RS29060 75c8d26103722804b78620925f03065c 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 279 4.7E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 SUPERFAMILY SSF143414 3 93 1.44E-23 T 29-03-2018 CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 SUPERFAMILY SSF143414 95 181 4.97E-23 T 29-03-2018 CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 2.0E-29 T 29-03-2018 CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 158 8.0E-29 T 29-03-2018 CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 Pfam PF00936 BMC domain 96 173 8.6E-22 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 Pfam PF00936 BMC domain 4 76 3.1E-20 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 PIRSF PIRSF034834 1 183 4.8E-83 T 29-03-2018 IPR011238 Polyhedral organelle shell protein PduT CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 SMART SM00877 95 173 9.8E-28 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18190 b259d3cf3bea334e0316d58117d3f6e7 184 SMART SM00877 3 77 3.9E-24 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS07965 7e2730cf5a8193942d10400ec05fa64e 327 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 39 323 3.1E-103 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS07965 7e2730cf5a8193942d10400ec05fa64e 327 SUPERFAMILY SSF53659 4 327 6.61E-107 T 29-03-2018 CKQ55_RS07965 7e2730cf5a8193942d10400ec05fa64e 327 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 327 7.8E-113 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS07965 7e2730cf5a8193942d10400ec05fa64e 327 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 327 36.006 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS07965 7e2730cf5a8193942d10400ec05fa64e 327 Gene3D G3DSA:3.40.718.10 2 327 9.5E-127 T 29-03-2018 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 4.8E-73 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 PIRSF PIRSF001336 17 658 1.6E-255 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 SUPERFAMILY SSF51419 92 369 3.18E-67 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 Gene3D G3DSA:3.20.20.10 115 369 1.8E-33 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 SUPERFAMILY SSF50621 481 584 9.42E-7 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 Gene3D G3DSA:2.40.37.10 22 114 1.2E-13 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 Gene3D G3DSA:2.40.37.10 422 604 5.9E-62 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.284 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 7.2E-71 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CKQ55_RS17200 5b9ee78c1f8dd6f5326f2e51d52b0eb5 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 3.6E-277 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CKQ55_RS03865 59b0b881d6ebb7b14b191ef593366158 328 Gene3D G3DSA:1.10.3470.10 31 327 1.6E-36 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS03865 59b0b881d6ebb7b14b191ef593366158 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 318 8.0E-55 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS12685 0ca3c1da798f53cc4df9634f9de31f88 305 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site CKQ55_RS12685 0ca3c1da798f53cc4df9634f9de31f88 305 SUPERFAMILY SSF53474 24 297 3.48E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS12685 0ca3c1da798f53cc4df9634f9de31f88 305 Pfam PF07859 alpha/beta hydrolase fold 75 280 4.1E-67 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CKQ55_RS12685 0ca3c1da798f53cc4df9634f9de31f88 305 Gene3D G3DSA:3.40.50.1820 2 302 9.6E-56 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS31805 ffcaddfde203c4fa3225ed38777a76ff 220 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 125 8.8E-10 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CKQ55_RS31805 ffcaddfde203c4fa3225ed38777a76ff 220 PIRSF PIRSF009320 2 219 1.5E-24 T 29-03-2018 CKQ55_RS31805 ffcaddfde203c4fa3225ed38777a76ff 220 Gene3D G3DSA:3.40.50.300 3 218 4.7E-23 T 29-03-2018 CKQ55_RS31805 ffcaddfde203c4fa3225ed38777a76ff 220 SUPERFAMILY SSF52540 1 203 2.67E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26885 ce0ff1ccf7740f83db157c5c1753f0b7 266 SUPERFAMILY SSF69118 39 262 4.12E-51 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS26885 ce0ff1ccf7740f83db157c5c1753f0b7 266 Pfam PF02627 Carboxymuconolactone decarboxylase family 173 256 2.4E-19 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS26885 ce0ff1ccf7740f83db157c5c1753f0b7 266 Pfam PF02627 Carboxymuconolactone decarboxylase family 47 130 2.8E-16 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS26885 ce0ff1ccf7740f83db157c5c1753f0b7 266 Gene3D G3DSA:1.20.1290.10 160 266 2.9E-25 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS26885 ce0ff1ccf7740f83db157c5c1753f0b7 266 Gene3D G3DSA:1.20.1290.10 20 159 4.1E-27 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS14275 d7ceccaecd1ee91ff708948923353411 370 Pfam PF01385 Probable transposase 170 273 2.0E-23 T 29-03-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 CKQ55_RS14275 d7ceccaecd1ee91ff708948923353411 370 Pfam PF12323 Helix-turn-helix domain 1 45 7.8E-23 T 29-03-2018 IPR021027 Transposase, putative, helix-turn-helix domain CKQ55_RS14275 d7ceccaecd1ee91ff708948923353411 370 Pfam PF07282 Putative transposase DNA-binding domain 287 355 1.1E-23 T 29-03-2018 IPR010095 Transposase IS605, OrfB, C-terminal CKQ55_RS14275 d7ceccaecd1ee91ff708948923353411 370 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 242 314 1.1E-9 T 29-03-2018 IPR010095 Transposase IS605, OrfB, C-terminal CKQ55_RS26490 295f6c40b1ea2c0f8ad73f5f9db86f25 381 Gene3D G3DSA:1.20.1090.10 178 380 2.6E-51 T 29-03-2018 CKQ55_RS26490 295f6c40b1ea2c0f8ad73f5f9db86f25 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 370 5.4E-97 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS26490 295f6c40b1ea2c0f8ad73f5f9db86f25 381 Gene3D G3DSA:3.40.50.1970 6 177 1.2E-34 T 29-03-2018 CKQ55_RS26490 295f6c40b1ea2c0f8ad73f5f9db86f25 381 SUPERFAMILY SSF56796 7 376 1.15E-94 T 29-03-2018 CKQ55_RS26740 2c5e37f30719a8aae579d4c0e76a91d4 317 Gene3D G3DSA:3.60.20.30 150 288 1.1E-37 T 29-03-2018 CKQ55_RS26740 2c5e37f30719a8aae579d4c0e76a91d4 317 Pfam PF01112 Asparaginase 15 281 7.5E-63 T 29-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 CKQ55_RS26740 2c5e37f30719a8aae579d4c0e76a91d4 317 SUPERFAMILY SSF56235 2 284 5.92E-75 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS26690 e34fc048566a869f916bdd3c8a19836c 246 SMART SM00382 26 216 4.6E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS26690 e34fc048566a869f916bdd3c8a19836c 246 PIRSF PIRSF039085 1 244 2.1E-97 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS26690 e34fc048566a869f916bdd3c8a19836c 246 Gene3D G3DSA:3.40.50.300 1 245 4.7E-73 T 29-03-2018 CKQ55_RS26690 e34fc048566a869f916bdd3c8a19836c 246 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS26690 e34fc048566a869f916bdd3c8a19836c 246 Pfam PF00005 ABC transporter 17 168 8.0E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26690 e34fc048566a869f916bdd3c8a19836c 246 SUPERFAMILY SSF52540 1 238 2.13E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 1.1E-116 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.6E-5 T 29-03-2018 IPR013105 Tetratricopeptide repeat 2 CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 Gene3D G3DSA:1.25.40.10 232 397 1.1E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 Gene3D G3DSA:1.25.40.10 77 231 2.8E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 Pfam PF07219 HemY protein N-terminus 26 132 1.6E-35 T 29-03-2018 IPR010817 HemY, N-terminal CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 SUPERFAMILY SSF48452 96 226 4.78E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS11915 ec71ba4d4e8866925a474b4c02fccfa9 398 SUPERFAMILY SSF48452 300 382 4.78E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS24520 921a875603b852a352105405288ea490 462 Pfam PF07690 Major Facilitator Superfamily 45 422 8.5E-15 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS24520 921a875603b852a352105405288ea490 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 3.8E-112 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CKQ55_RS24520 921a875603b852a352105405288ea490 462 Gene3D G3DSA:1.20.1250.20 19 238 2.3E-15 T 29-03-2018 CKQ55_RS24520 921a875603b852a352105405288ea490 462 SUPERFAMILY SSF103473 20 460 4.58E-39 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS24520 921a875603b852a352105405288ea490 462 Gene3D G3DSA:1.20.1250.20 244 462 2.9E-22 T 29-03-2018 CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 SMART SM00345 36 95 1.9E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 257 60.789 T 29-03-2018 IPR023730 HTH-type transcriptional repressor NanR CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 SUPERFAMILY SSF48008 120 252 1.31E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.8E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.8E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 Pfam PF07729 FCD domain 125 246 4.8E-20 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 Gene3D G3DSA:1.20.120.530 116 265 9.2E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 SMART SM00895 123 247 1.2E-16 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 SUPERFAMILY SSF46785 28 99 2.03E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 8.3E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS15825 764373299fb79a2b010ed6f46820780b 268 Gene3D G3DSA:1.10.10.10 26 103 4.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS30310 a6a6d6ef222df57f19b0fa1a24b6b518 105 Pfam PF01527 Transposase 5 79 1.2E-16 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CKQ55_RS30310 a6a6d6ef222df57f19b0fa1a24b6b518 105 SUPERFAMILY SSF46689 7 96 1.63E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS30310 a6a6d6ef222df57f19b0fa1a24b6b518 105 Gene3D G3DSA:1.10.10.60 12 95 3.6E-17 T 29-03-2018 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 Gene3D G3DSA:1.10.287.130 225 302 4.5E-15 T 29-03-2018 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.2E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 SUPERFAMILY SSF103190 35 153 1.57E-12 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 SMART SM00388 240 306 3.1E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 SUPERFAMILY SSF55874 296 453 8.25E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 Pfam PF17203 Single cache domain 3 44 120 7.3E-7 T 29-03-2018 IPR033463 Single cache domain 3 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 SMART SM00387 348 455 3.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 SUPERFAMILY SSF47384 230 303 5.3E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 Gene3D G3DSA:3.30.565.10 306 462 2.3E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 302 1.8E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 453 7.0E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS11450 8339beaa1ff12f19801858216ed252a0 462 Gene3D G3DSA:3.30.450.20 31 156 2.5E-9 T 29-03-2018 CKQ55_RS24660 37fba65e4818bd79c4df2f4685013ea6 109 SUPERFAMILY SSF102816 3 109 2.35E-49 T 29-03-2018 IPR007376 dsDNA mimic, putative CKQ55_RS24660 37fba65e4818bd79c4df2f4685013ea6 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 34.539 T 29-03-2018 IPR007376 dsDNA mimic, putative CKQ55_RS24660 37fba65e4818bd79c4df2f4685013ea6 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 6.0E-50 T 29-03-2018 IPR007376 dsDNA mimic, putative CKQ55_RS24660 37fba65e4818bd79c4df2f4685013ea6 109 PIRSF PIRSF004916 1 109 1.1E-55 T 29-03-2018 IPR007376 dsDNA mimic, putative CKQ55_RS24660 37fba65e4818bd79c4df2f4685013ea6 109 Gene3D G3DSA:3.10.450.140 10 108 4.1E-44 T 29-03-2018 IPR007376 dsDNA mimic, putative CKQ55_RS24660 37fba65e4818bd79c4df2f4685013ea6 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 4.3E-45 T 29-03-2018 IPR007376 dsDNA mimic, putative CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 Pfam PF08298 PrkA AAA domain 20 380 2.8E-179 T 29-03-2018 IPR013153 PrkA AAA domain CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 SMART SM00763 19 380 1.6E-218 T 29-03-2018 IPR013153 PrkA AAA domain CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.1E-75 T 29-03-2018 IPR010650 PrkA C-terminal domain CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 PIRSF PIRSF000549 1 644 3.7E-292 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 Gene3D G3DSA:3.40.50.300 69 355 4.2E-13 T 29-03-2018 CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 SUPERFAMILY SSF52540 75 145 6.89E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29910 c4d8a13d30a2e26a7a65bb6d3bafa37d 644 SUPERFAMILY SSF52540 241 368 6.89E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09210 f052e2cdc36c85340cd5aa11ab785b50 227 Pfam PF07670 Nucleoside recognition 87 196 8.5E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 3.3E-7 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 PIRSF PIRSF500134 338 388 0.005 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 PIRSF PIRSF500134 1 343 5.2E-119 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Gene3D G3DSA:1.20.5.100 194 211 1.2E-13 T 29-03-2018 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Gene3D G3DSA:1.10.1040.10 212 287 3.1E-26 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Gene3D G3DSA:3.40.50.720 288 388 3.5E-17 T 29-03-2018 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 4.5E-34 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 SUPERFAMILY SSF52413 283 387 1.03E-27 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 SMART SM00984 300 387 3.7E-13 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 PIRSF PIRSF000124 1 388 4.9E-138 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 9.2E-104 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.8E-26 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 SUPERFAMILY SSF48179 191 287 1.87E-29 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 Gene3D G3DSA:3.40.50.720 1 193 5.9E-52 T 29-03-2018 CKQ55_RS22685 e10d0044c0d1671e92eb20d3ee3cda27 388 SUPERFAMILY SSF51735 1 194 3.68E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 Gene3D G3DSA:1.10.10.10 139 215 7.6E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 SUPERFAMILY SSF52172 7 135 7.54E-36 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 Pfam PF00072 Response regulator receiver domain 9 120 1.3E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 8.2E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 SUPERFAMILY SSF46894 146 213 1.56E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 SMART SM00448 7 120 1.7E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 Gene3D G3DSA:3.40.50.2300 6 138 3.6E-38 T 29-03-2018 CKQ55_RS24510 a76537f580f5a51682fe9a84447bcac1 216 SMART SM00421 153 210 1.2E-25 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS22895 625b2967f0bb2f90c50349e79ffacbcf 474 Pfam PF00929 Exonuclease 12 187 1.3E-27 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS22895 625b2967f0bb2f90c50349e79ffacbcf 474 SUPERFAMILY SSF53098 9 473 7.01E-133 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS22895 625b2967f0bb2f90c50349e79ffacbcf 474 Gene3D G3DSA:3.30.420.10 1 200 2.8E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS22895 625b2967f0bb2f90c50349e79ffacbcf 474 Pfam PF08411 Exonuclease C-terminal 211 471 3.7E-100 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CKQ55_RS22895 625b2967f0bb2f90c50349e79ffacbcf 474 PIRSF PIRSF000977 2 474 1.1E-196 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 Pfam PF00682 HMGL-like 4 273 2.3E-104 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 SUPERFAMILY SSF110921 391 499 2.88E-26 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 SMART SM00917 369 500 1.0E-37 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 1.9E-255 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.2E-36 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.622 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 SUPERFAMILY SSF51569 1 290 6.96E-97 T 29-03-2018 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 Gene3D G3DSA:3.20.20.70 1 332 9.9E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08215 1b59e678c309a48361763da601ba82bd 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS10035 4643084d7c5d39eb6d2f086aa4c2da5f 252 PIRSF PIRSF020736 1 252 2.4E-87 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CKQ55_RS10035 4643084d7c5d39eb6d2f086aa4c2da5f 252 SUPERFAMILY SSF47240 7 57 9.97E-71 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS10035 4643084d7c5d39eb6d2f086aa4c2da5f 252 SUPERFAMILY SSF47240 105 251 9.97E-71 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS10035 4643084d7c5d39eb6d2f086aa4c2da5f 252 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 6.4E-111 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CKQ55_RS10035 4643084d7c5d39eb6d2f086aa4c2da5f 252 Gene3D G3DSA:1.20.1260.10 3 252 1.8E-68 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS26155 77be0b64c7521246a97619b2b1ccc195 406 SUPERFAMILY SSF46785 12 77 5.66E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26155 77be0b64c7521246a97619b2b1ccc195 406 Gene3D G3DSA:3.30.420.40 227 374 9.9E-28 T 29-03-2018 CKQ55_RS26155 77be0b64c7521246a97619b2b1ccc195 406 Gene3D G3DSA:1.10.10.10 11 82 3.7E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26155 77be0b64c7521246a97619b2b1ccc195 406 Pfam PF00480 ROK family 87 389 2.6E-49 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS26155 77be0b64c7521246a97619b2b1ccc195 406 SUPERFAMILY SSF53067 86 394 8.48E-44 T 29-03-2018 CKQ55_RS26155 77be0b64c7521246a97619b2b1ccc195 406 Gene3D G3DSA:3.30.420.40 83 226 1.3E-26 T 29-03-2018 CKQ55_RS03125 edd6f0cf8460ea19312e19a3594b4623 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.4E-31 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS03125 edd6f0cf8460ea19312e19a3594b4623 219 Gene3D G3DSA:1.10.3720.10 1 218 1.7E-44 T 29-03-2018 CKQ55_RS03125 edd6f0cf8460ea19312e19a3594b4623 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 9.1E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS03125 edd6f0cf8460ea19312e19a3594b4623 219 SUPERFAMILY SSF161098 13 202 6.02E-45 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01800 f46f72594486fe93019ba1dbab6de1de 109 Pfam PF04358 DsrC like protein 4 109 7.9E-46 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CKQ55_RS01800 f46f72594486fe93019ba1dbab6de1de 109 SUPERFAMILY SSF69721 3 109 1.44E-41 T 29-03-2018 IPR025526 DsrC-like domain CKQ55_RS01800 f46f72594486fe93019ba1dbab6de1de 109 PIRSF PIRSF006223 2 109 5.7E-46 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CKQ55_RS01800 f46f72594486fe93019ba1dbab6de1de 109 Gene3D G3DSA:3.30.1420.10 2 39 2.7E-15 T 29-03-2018 CKQ55_RS01800 f46f72594486fe93019ba1dbab6de1de 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 1.5E-49 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CKQ55_RS01800 f46f72594486fe93019ba1dbab6de1de 109 Gene3D G3DSA:1.10.10.370 40 108 6.4E-33 T 29-03-2018 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 PRINTS PR00969 Pili chaperone signature 166 181 2.9E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 PRINTS PR00969 Pili chaperone signature 105 122 2.9E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 PRINTS PR00969 Pili chaperone signature 28 37 2.9E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 PRINTS PR00969 Pili chaperone signature 77 98 2.9E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 PRINTS PR00969 Pili chaperone signature 131 146 2.9E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 149 6.7E-46 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 Gene3D G3DSA:2.60.40.10 27 150 1.2E-40 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 172 233 5.0E-13 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 Gene3D G3DSA:2.60.40.10 154 240 3.0E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 SUPERFAMILY SSF49354 23 149 3.84E-43 T 29-03-2018 IPR008962 PapD-like CKQ55_RS07865 0cb59795d8ccc0c588efc1740e6fc6cf 240 SUPERFAMILY SSF49584 151 237 8.24E-18 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 Pfam PF04940 Sensors of blue-light using FAD 2 92 1.6E-25 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 SUPERFAMILY SSF54975 1 133 1.11E-35 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 SMART SM00052 157 392 7.5E-39 T 29-03-2018 IPR001633 EAL domain CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 SUPERFAMILY SSF141868 165 387 2.09E-50 T 29-03-2018 IPR001633 EAL domain CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 SMART SM01034 2 94 1.3E-36 T 29-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 Pfam PF00563 EAL domain 166 387 2.1E-48 T 29-03-2018 IPR001633 EAL domain CKQ55_RS03410 796d79bc8b7e380017934b7afc7f9065 407 Gene3D G3DSA:3.20.20.450 159 389 2.8E-49 T 29-03-2018 IPR001633 EAL domain CKQ55_RS02180 fa940664eeadeb8a874076d60df0ca59 382 Pfam PF07690 Major Facilitator Superfamily 210 370 1.9E-13 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS02180 fa940664eeadeb8a874076d60df0ca59 382 Pfam PF07690 Major Facilitator Superfamily 11 191 1.5E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS02180 fa940664eeadeb8a874076d60df0ca59 382 Gene3D G3DSA:1.20.1250.20 2 190 2.0E-20 T 29-03-2018 CKQ55_RS02180 fa940664eeadeb8a874076d60df0ca59 382 Gene3D G3DSA:1.20.1250.20 191 376 1.5E-18 T 29-03-2018 CKQ55_RS02180 fa940664eeadeb8a874076d60df0ca59 382 SUPERFAMILY SSF103473 7 370 3.27E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS02180 fa940664eeadeb8a874076d60df0ca59 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 35.92 T 29-03-2018 IPR023745 MSF-type transporter, YcaD CKQ55_RS03915 4a4f3e37f022f2dfd610b11bd2ee44a3 209 SUPERFAMILY SSF52218 37 202 1.62E-53 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS03915 4a4f3e37f022f2dfd610b11bd2ee44a3 209 TIGRFAM TIGR01752 flav_long: flavodoxin 37 201 1.7E-77 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CKQ55_RS03915 4a4f3e37f022f2dfd610b11bd2ee44a3 209 Gene3D G3DSA:3.40.50.360 37 203 3.8E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS03915 4a4f3e37f022f2dfd610b11bd2ee44a3 209 PIRSF PIRSF038996 34 205 1.8E-71 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CKQ55_RS03915 4a4f3e37f022f2dfd610b11bd2ee44a3 209 Pfam PF00258 Flavodoxin 39 193 1.6E-33 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS03915 4a4f3e37f022f2dfd610b11bd2ee44a3 209 ProSitePatterns PS00201 Flavodoxin signature. 39 55 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 TIGRFAM TIGR03356 BGL: beta-galactosidase 4 445 8.9E-156 T 29-03-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 SUPERFAMILY SSF51445 3 453 9.97E-171 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 7.1E-20 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 7.1E-20 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 7.1E-20 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 422 434 7.1E-20 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 286 300 7.1E-20 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 Gene3D G3DSA:3.20.20.80 1 456 3.7E-171 T 29-03-2018 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 Pfam PF00232 Glycosyl hydrolase family 1 3 453 1.9E-171 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS25760 d6cd9888b94b6cf43001509739d11a1e 456 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CKQ55_RS25480 62d4fd3e8c4739d852e4695536475cc6 559 Pfam PF13454 FAD-NAD(P)-binding 28 187 2.0E-27 T 29-03-2018 CKQ55_RS25480 62d4fd3e8c4739d852e4695536475cc6 559 Gene3D G3DSA:3.50.50.60 24 559 3.6E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS25480 62d4fd3e8c4739d852e4695536475cc6 559 SUPERFAMILY SSF51905 24 236 3.63E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS11660 2ccda697ae4ab27528a93bd46cabd170 177 Gene3D G3DSA:3.40.50.360 2 174 9.3E-21 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS11660 2ccda697ae4ab27528a93bd46cabd170 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CKQ55_RS11660 2ccda697ae4ab27528a93bd46cabd170 177 Pfam PF12724 Flavodoxin domain 4 152 6.5E-52 T 29-03-2018 IPR026816 Flavodoxin domain CKQ55_RS11660 2ccda697ae4ab27528a93bd46cabd170 177 SUPERFAMILY SSF52218 2 173 1.68E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS03145 a4bbed86f0f1aa71fdb85453a8564dc6 304 SUPERFAMILY SSF53335 44 295 1.01E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS03145 a4bbed86f0f1aa71fdb85453a8564dc6 304 Pfam PF05971 Protein of unknown function (DUF890) 3 296 9.4E-144 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CKQ55_RS03145 a4bbed86f0f1aa71fdb85453a8564dc6 304 PIRSF PIRSF029038 1 304 1.2E-144 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CKQ55_RS03145 a4bbed86f0f1aa71fdb85453a8564dc6 304 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 5 298 53.158 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CKQ55_RS03145 a4bbed86f0f1aa71fdb85453a8564dc6 304 Gene3D G3DSA:3.40.50.150 38 296 2.8E-52 T 29-03-2018 CKQ55_RS17535 0aa0aa1ee42ecb4b56ab8ab81a284a23 83 SUPERFAMILY SSF159871 4 83 2.09E-20 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS17535 0aa0aa1ee42ecb4b56ab8ab81a284a23 83 Pfam PF07338 Protein of unknown function (DUF1471) 32 83 2.4E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS17535 0aa0aa1ee42ecb4b56ab8ab81a284a23 83 Gene3D G3DSA:3.30.1660.10 20 83 3.1E-20 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 Pfam PF00664 ABC transporter transmembrane region 27 295 3.1E-38 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 Gene3D G3DSA:3.40.50.300 328 581 1.2E-67 T 29-03-2018 CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 Pfam PF00005 ABC transporter 357 505 1.0E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 SUPERFAMILY SSF52540 337 576 1.22E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 SMART SM00382 366 557 1.6E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 SUPERFAMILY SSF90123 12 331 6.67E-71 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS06130 40aae625deb6296bbfb3b49ba22b65ae 592 Gene3D G3DSA:1.20.1560.10 5 327 2.7E-62 T 29-03-2018 CKQ55_RS09540 ebc420b9b14bda031f185158bbbd19fb 265 Pfam PF01381 Helix-turn-helix 6 58 2.2E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS09540 ebc420b9b14bda031f185158bbbd19fb 265 Gene3D G3DSA:1.10.3100.10 1 104 1.7E-15 T 29-03-2018 IPR027910 YdiL-like domain CKQ55_RS09540 ebc420b9b14bda031f185158bbbd19fb 265 SUPERFAMILY SSF47413 3 70 3.1E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS09540 ebc420b9b14bda031f185158bbbd19fb 265 SMART SM00530 5 60 2.3E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS12375 b70b7239d58d1e49dead47e56865d803 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 29-03-2018 CKQ55_RS12375 b70b7239d58d1e49dead47e56865d803 419 SUPERFAMILY SSF51658 4 418 6.42E-83 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS12375 b70b7239d58d1e49dead47e56865d803 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 1.3E-243 T 29-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CKQ55_RS12375 b70b7239d58d1e49dead47e56865d803 419 Gene3D G3DSA:3.20.20.150 1 419 7.1E-110 T 29-03-2018 CKQ55_RS12375 b70b7239d58d1e49dead47e56865d803 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 278.392 T 29-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CKQ55_RS12375 b70b7239d58d1e49dead47e56865d803 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 5.8E-234 T 29-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CKQ55_RS20335 512068709f81d0a67ec35c82c94fdf4d 297 Gene3D G3DSA:3.30.420.40 114 293 1.2E-47 T 29-03-2018 CKQ55_RS20335 512068709f81d0a67ec35c82c94fdf4d 297 SUPERFAMILY SSF53067 1 290 1.1E-53 T 29-03-2018 CKQ55_RS20335 512068709f81d0a67ec35c82c94fdf4d 297 Gene3D G3DSA:3.30.420.40 2 113 7.0E-21 T 29-03-2018 CKQ55_RS20335 512068709f81d0a67ec35c82c94fdf4d 297 Pfam PF00480 ROK family 5 286 9.1E-42 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 Gene3D G3DSA:3.40.30.10 3 183 1.6E-44 T 29-03-2018 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 SUPERFAMILY SSF52833 5 182 1.0E-54 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.4E-18 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 1.4E-18 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.4E-18 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 Pfam PF00255 Glutathione peroxidase 6 111 3.7E-43 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 29-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 PIRSF PIRSF000303 1 183 7.6E-62 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS24820 74e23dbb0e66b51623d27521f672ca2c 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 50.634 T 29-03-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 CKQ55_RS18735 88c0ca69c3b6c6de6319642592d2b245 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 8.2E-78 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS18735 88c0ca69c3b6c6de6319642592d2b245 253 Gene3D G3DSA:3.40.1210.10 1 247 3.0E-81 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS18735 88c0ca69c3b6c6de6319642592d2b245 253 SUPERFAMILY SSF64167 1 247 2.49E-82 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS18735 88c0ca69c3b6c6de6319642592d2b245 253 Pfam PF01975 Survival protein SurE 3 181 1.5E-56 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS18735 88c0ca69c3b6c6de6319642592d2b245 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.089 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS01100 eed6e0776f5b0ebe71a9e148d39983b5 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 29-03-2018 IPR019897 RidA, conserved site CKQ55_RS01100 eed6e0776f5b0ebe71a9e148d39983b5 130 SUPERFAMILY SSF55298 1 127 8.17E-37 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS01100 eed6e0776f5b0ebe71a9e148d39983b5 130 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.8E-76 T 29-03-2018 IPR019898 Putative aminoacrylate peracid reductase RutC CKQ55_RS01100 eed6e0776f5b0ebe71a9e148d39983b5 130 Gene3D G3DSA:3.30.1330.40 1 128 9.2E-33 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS01100 eed6e0776f5b0ebe71a9e148d39983b5 130 Pfam PF01042 Endoribonuclease L-PSP 14 125 5.0E-32 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS01100 eed6e0776f5b0ebe71a9e148d39983b5 130 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 45.006 T 29-03-2018 IPR019898 Putative aminoacrylate peracid reductase RutC CKQ55_RS18955 87d198e035a082e61e98efbf7c79abbc 331 Pfam PF01032 FecCD transport family 15 324 4.1E-92 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS18955 87d198e035a082e61e98efbf7c79abbc 331 SUPERFAMILY SSF81345 4 325 2.09E-84 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS18955 87d198e035a082e61e98efbf7c79abbc 331 Gene3D G3DSA:1.10.3470.10 2 330 7.6E-72 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS04600 8bdf194faaca5edd6d53dae4d34848dc 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 53 3.6E-12 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS04600 8bdf194faaca5edd6d53dae4d34848dc 277 Gene3D G3DSA:1.10.3720.10 5 266 8.7E-45 T 29-03-2018 CKQ55_RS04600 8bdf194faaca5edd6d53dae4d34848dc 277 SUPERFAMILY SSF161098 72 258 4.32E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04600 8bdf194faaca5edd6d53dae4d34848dc 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 7.5E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS17085 7af8f72d7c22f16c037235e0399ddc34 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 50 238 2.9E-74 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CKQ55_RS17085 7af8f72d7c22f16c037235e0399ddc34 239 Gene3D G3DSA:3.40.50.150 30 239 1.6E-29 T 29-03-2018 CKQ55_RS17085 7af8f72d7c22f16c037235e0399ddc34 239 Pfam PF02390 Putative methyltransferase 64 233 1.2E-62 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CKQ55_RS17085 7af8f72d7c22f16c037235e0399ddc34 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.025 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CKQ55_RS17085 7af8f72d7c22f16c037235e0399ddc34 239 SUPERFAMILY SSF53335 18 237 5.57E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS12305 a7883cfbdc73e0a1c20cf479c91b67ae 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 17 300 3.8E-141 T 29-03-2018 CKQ55_RS12305 a7883cfbdc73e0a1c20cf479c91b67ae 308 PIRSF PIRSF005355 1 306 3.7E-96 T 29-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CKQ55_RS12305 a7883cfbdc73e0a1c20cf479c91b67ae 308 Pfam PF01040 UbiA prenyltransferase family 26 277 5.8E-39 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CKQ55_RS12305 a7883cfbdc73e0a1c20cf479c91b67ae 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 8 301 21.101 T 29-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CKQ55_RS26395 a60f5c80629903479ffba47e7f1fed09 265 Gene3D G3DSA:3.40.50.300 9 264 1.2E-56 T 29-03-2018 CKQ55_RS26395 a60f5c80629903479ffba47e7f1fed09 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 264 4.2E-8 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CKQ55_RS26395 a60f5c80629903479ffba47e7f1fed09 265 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 24 265 4.7E-111 T 29-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CKQ55_RS26395 a60f5c80629903479ffba47e7f1fed09 265 Pfam PF00005 ABC transporter 40 194 4.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26395 a60f5c80629903479ffba47e7f1fed09 265 SUPERFAMILY SSF52540 22 263 7.94E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29180 891889067eacd8b70d6848d5691f93b5 305 SUPERFAMILY SSF103481 194 296 4.58E-13 T 29-03-2018 CKQ55_RS29180 891889067eacd8b70d6848d5691f93b5 305 SUPERFAMILY SSF103481 39 140 3.92E-14 T 29-03-2018 CKQ55_RS29180 891889067eacd8b70d6848d5691f93b5 305 Pfam PF00892 EamA-like transporter family 5 138 5.0E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS29180 891889067eacd8b70d6848d5691f93b5 305 Pfam PF00892 EamA-like transporter family 160 288 2.8E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 2.5E-71 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 SMART SM00062 42 263 1.4E-84 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 SMART SM00079 42 262 4.9E-5 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 Gene3D G3DSA:3.40.190.10 159 265 5.2E-15 T 29-03-2018 CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 Gene3D G3DSA:3.40.190.10 9 158 1.8E-48 T 29-03-2018 CKQ55_RS23450 d02e30a24f8a68a029eb668711dd5395 266 SUPERFAMILY SSF53850 16 264 5.91E-76 T 29-03-2018 CKQ55_RS06755 d46ad634422f5204dcc112258c108fc9 260 Pfam PF00005 ABC transporter 24 183 1.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06755 d46ad634422f5204dcc112258c108fc9 260 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06755 d46ad634422f5204dcc112258c108fc9 260 SMART SM00382 32 232 3.8E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06755 d46ad634422f5204dcc112258c108fc9 260 Gene3D G3DSA:3.40.50.300 1 257 1.6E-55 T 29-03-2018 CKQ55_RS06755 d46ad634422f5204dcc112258c108fc9 260 SUPERFAMILY SSF52540 6 255 8.36E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01580 842309b1c9c34ae8a074c12769cfa397 221 Gene3D G3DSA:1.10.3720.10 2 221 1.3E-44 T 29-03-2018 CKQ55_RS01580 842309b1c9c34ae8a074c12769cfa397 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 112 4.8E-25 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS01580 842309b1c9c34ae8a074c12769cfa397 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 218 4.8E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01580 842309b1c9c34ae8a074c12769cfa397 221 SUPERFAMILY SSF161098 15 203 1.57E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS05605 a2aceb67bd1d73a13b7def3e627e08b3 106 Gene3D G3DSA:1.10.260.40 17 89 8.2E-4 T 29-03-2018 CKQ55_RS05605 a2aceb67bd1d73a13b7def3e627e08b3 106 SUPERFAMILY SSF47413 15 87 1.23E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS05605 a2aceb67bd1d73a13b7def3e627e08b3 106 Pfam PF05269 Bacteriophage CII protein 19 52 1.5E-4 T 29-03-2018 IPR007933 Transcription activator CII GO:0003677|GO:0006355 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 235 4.1E-51 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 SMART SM00934 16 237 3.9E-100 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 237 1.7E-54 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.983 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 SUPERFAMILY SSF51366 14 240 1.44E-77 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS29410 5b6f0b6f9505c9d80ff6ecf4729958a2 245 Gene3D G3DSA:3.20.20.70 11 242 3.4E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22655 dc3bb19686e1446fdb691fe5436038b7 482 Pfam PF13440 Polysaccharide biosynthesis protein 35 322 3.7E-81 T 29-03-2018 CKQ55_RS22655 dc3bb19686e1446fdb691fe5436038b7 482 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 465 3.3E-9 T 29-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CKQ55_RS10105 8c976878993db1b6004d99b6dbc7ceb2 451 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 11 434 1.1E-147 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS10105 8c976878993db1b6004d99b6dbc7ceb2 451 PIRSF PIRSF006351 2 443 1.7E-140 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS10105 8c976878993db1b6004d99b6dbc7ceb2 451 Pfam PF02378 Phosphotransferase system, EIIC 28 359 1.0E-58 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS10105 8c976878993db1b6004d99b6dbc7ceb2 451 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 11 434 1.1E-147 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 SMART SM00354 1 73 7.4E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 Gene3D G3DSA:3.40.50.2300 57 167 1.3E-25 T 29-03-2018 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 4.6E-14 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 Gene3D G3DSA:3.40.50.2300 168 334 4.8E-19 T 29-03-2018 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 4.3E-154 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 29-03-2018 CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 SUPERFAMILY SSF53822 60 314 1.41E-40 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS08190 ef73596d42c9be83daafdcef7242fa3b 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 29-03-2018 CKQ55_RS27560 0c88ecf2082351b3e35ece90c0b59f51 142 SUPERFAMILY SSF50692 17 129 1.29E-20 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS27560 0c88ecf2082351b3e35ece90c0b59f51 142 Pfam PF01568 Molydopterin dinucleotide binding domain 18 124 3.5E-17 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS27560 0c88ecf2082351b3e35ece90c0b59f51 142 Gene3D G3DSA:2.40.40.20 5 135 4.0E-27 T 29-03-2018 CKQ55_RS29205 4a236bb69ce1b8333b3ac62bb38029fd 264 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS29205 4a236bb69ce1b8333b3ac62bb38029fd 264 SMART SM00382 34 215 2.9E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29205 4a236bb69ce1b8333b3ac62bb38029fd 264 Pfam PF00005 ABC transporter 27 166 2.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29205 4a236bb69ce1b8333b3ac62bb38029fd 264 Gene3D G3DSA:3.40.50.300 4 224 1.4E-61 T 29-03-2018 CKQ55_RS29205 4a236bb69ce1b8333b3ac62bb38029fd 264 SUPERFAMILY SSF52540 9 243 1.19E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 SMART SM00922 163 269 2.9E-7 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 132 157 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 SUPERFAMILY SSF51604 145 397 8.65E-55 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 Gene3D G3DSA:3.20.20.120 160 390 2.9E-46 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 Gene3D G3DSA:3.30.390.10 1 159 3.1E-48 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 SUPERFAMILY SSF54826 41 158 2.65E-23 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 Pfam PF13378 Enolase C-terminal domain-like 183 392 1.4E-36 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 1 401 79.66 T 29-03-2018 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 CKQ55_RS21315 129e331381285268b8189796890d8f8c 401 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 66 157 2.8E-8 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 Pfam PF01595 Domain of unknown function DUF21 7 197 7.1E-39 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 SUPERFAMILY SSF54631 200 335 3.65E-22 T 29-03-2018 CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 Gene3D G3DSA:3.20.20.70 157 355 1.5E-21 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 Gene3D G3DSA:3.30.465.10 356 431 9.6E-24 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 Pfam PF00571 CBS domain 284 333 0.0025 T 29-03-2018 IPR000644 CBS domain CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 SMART SM01091 346 426 5.8E-29 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 Pfam PF03471 Transporter associated domain 347 425 3.6E-22 T 29-03-2018 IPR005170 Transporter-associated domain CKQ55_RS10295 a2eec039832561711084b9edf9b11712 447 SUPERFAMILY SSF56176 344 428 4.91E-24 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS14500 182b8f9eab413e7de8cd12ca6c3eaf8a 232 Pfam PF03737 Aldolase/RraA 28 178 2.7E-41 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CKQ55_RS14500 182b8f9eab413e7de8cd12ca6c3eaf8a 232 SUPERFAMILY SSF89562 24 189 2.88E-42 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CKQ55_RS14500 182b8f9eab413e7de8cd12ca6c3eaf8a 232 Gene3D G3DSA:3.50.30.40 20 198 2.1E-51 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CKQ55_RS02915 5f13379f34f26e65866d012f7b4056d0 75 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 60 4.5E-18 T 29-03-2018 CKQ55_RS02915 5f13379f34f26e65866d012f7b4056d0 75 Gene3D G3DSA:1.10.260.40 2 61 3.0E-16 T 29-03-2018 CKQ55_RS02915 5f13379f34f26e65866d012f7b4056d0 75 SUPERFAMILY SSF47413 2 59 7.31E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS24955 99bb208da1dc36e79cff4edd3dd23bc6 78 SUPERFAMILY SSF58042 24 74 8.37E-23 T 29-03-2018 CKQ55_RS24955 99bb208da1dc36e79cff4edd3dd23bc6 78 PIRSF PIRSF002855 1 78 3.5E-29 T 29-03-2018 IPR016367 Murein-lipoprotein CKQ55_RS24955 99bb208da1dc36e79cff4edd3dd23bc6 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 3.3E-24 T 29-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 CKQ55_RS24955 99bb208da1dc36e79cff4edd3dd23bc6 78 Gene3D G3DSA:1.20.5.190 22 73 9.0E-17 T 29-03-2018 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 SUPERFAMILY SSF52518 371 550 9.63E-52 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 SUPERFAMILY SSF52518 12 181 1.18E-46 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Gene3D G3DSA:3.40.50.970 5 199 4.6E-46 T 29-03-2018 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 1.6E-39 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Gene3D G3DSA:3.40.50.970 359 553 3.7E-36 T 29-03-2018 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 1.3E-28 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Gene3D G3DSA:3.40.50.1220 200 346 7.8E-33 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 SUPERFAMILY SSF52467 190 360 1.57E-39 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 550 5.6E-271 T 29-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 177 9.3E-50 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS25335 b931937e0840742f2203634dc70f37eb 559 Gene3D G3DSA:1.20.5.740 347 358 2.0E-14 T 29-03-2018 CKQ55_RS19990 eabb65a3ad2bb483f3eb85d9d9d8f68b 282 SUPERFAMILY SSF46689 1 76 5.38E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS19990 eabb65a3ad2bb483f3eb85d9d9d8f68b 282 Gene3D G3DSA:3.40.50.10490 77 275 7.9E-33 T 29-03-2018 CKQ55_RS19990 eabb65a3ad2bb483f3eb85d9d9d8f68b 282 SUPERFAMILY SSF53697 104 278 4.13E-35 T 29-03-2018 CKQ55_RS19990 eabb65a3ad2bb483f3eb85d9d9d8f68b 282 Pfam PF01380 SIS domain 128 257 3.6E-28 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS19990 eabb65a3ad2bb483f3eb85d9d9d8f68b 282 Gene3D G3DSA:1.10.10.10 1 76 1.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19990 eabb65a3ad2bb483f3eb85d9d9d8f68b 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.3E-28 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS21575 3cf0948f184ad029575e931475251e5e 150 Gene3D G3DSA:3.10.450.40 8 133 1.4E-15 T 29-03-2018 CKQ55_RS21575 3cf0948f184ad029575e931475251e5e 150 Pfam PF04965 Gene 25-like lysozyme 35 116 6.8E-11 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CKQ55_RS21575 3cf0948f184ad029575e931475251e5e 150 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 116 2.7E-22 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CKQ55_RS21575 3cf0948f184ad029575e931475251e5e 150 SUPERFAMILY SSF160719 35 120 1.12E-17 T 29-03-2018 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 89 105 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 152 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 116 133 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 208 220 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 155 171 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 173 190 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 1.5E-34 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 PIRSF PIRSF000532 1 326 9.0E-64 T 29-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 Pfam PF00365 Phosphofructokinase 2 280 1.9E-59 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 SUPERFAMILY SSF53784 1 323 1.83E-68 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CKQ55_RS12605 14fe96e07d29649084e510bdea69ecdd 326 Gene3D G3DSA:3.40.50.450 1 211 1.4E-48 T 29-03-2018 CKQ55_RS17425 211f2c006bfbc2e161cf53a7472fabd0 141 SUPERFAMILY SSF53062 9 128 7.72E-24 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS17425 211f2c006bfbc2e161cf53a7472fabd0 141 Pfam PF03610 PTS system fructose IIA component 10 119 8.3E-15 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS17425 211f2c006bfbc2e161cf53a7472fabd0 141 Gene3D G3DSA:3.40.50.510 4 130 1.0E-24 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.6E-46 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.025 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 Gene3D G3DSA:3.90.1170.10 1 136 5.7E-50 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.1E-58 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15350 1faa9c5830eee7c841f41339d8e812a0 136 SUPERFAMILY SSF54686 3 133 1.83E-54 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS27440 db4ca3f784525af178ba21857d8f9257 247 Gene3D G3DSA:3.40.50.880 34 242 5.2E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS27440 db4ca3f784525af178ba21857d8f9257 247 SUPERFAMILY SSF52317 32 221 8.87E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS27440 db4ca3f784525af178ba21857d8f9257 247 Pfam PF00117 Glutamine amidotransferase class-I 79 203 1.0E-18 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS04050 905b6db37d38f043b2f3247d2c51b727 155 SUPERFAMILY SSF55486 3 151 3.42E-50 T 29-03-2018 CKQ55_RS04050 905b6db37d38f043b2f3247d2c51b727 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site CKQ55_RS04050 905b6db37d38f043b2f3247d2c51b727 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 2.3E-37 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CKQ55_RS04050 905b6db37d38f043b2f3247d2c51b727 155 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 3.9E-39 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CKQ55_RS04050 905b6db37d38f043b2f3247d2c51b727 155 Gene3D G3DSA:3.40.390.30 1 155 3.5E-55 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CKQ55_RS04050 905b6db37d38f043b2f3247d2c51b727 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.957 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CKQ55_RS29115 a42de565e31766eb094d9b44c756b9a9 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 251 6.3E-66 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS29115 a42de565e31766eb094d9b44c756b9a9 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS29115 a42de565e31766eb094d9b44c756b9a9 256 SMART SM00062 35 253 1.5E-72 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS29115 a42de565e31766eb094d9b44c756b9a9 256 SUPERFAMILY SSF53850 1 253 6.12E-71 T 29-03-2018 CKQ55_RS29115 a42de565e31766eb094d9b44c756b9a9 256 Gene3D G3DSA:3.40.190.10 175 256 4.5E-14 T 29-03-2018 CKQ55_RS29115 a42de565e31766eb094d9b44c756b9a9 256 Gene3D G3DSA:3.40.190.10 24 174 4.3E-45 T 29-03-2018 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 SMART SM00788 4 425 1.2E-300 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 Gene3D G3DSA:3.90.170.10 267 432 2.2E-66 T 29-03-2018 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.803 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 29-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 29-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 SUPERFAMILY SSF52540 3 431 6.59E-180 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 5.0E-207 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 Gene3D G3DSA:3.40.440.10 152 266 1.3E-27 T 29-03-2018 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 Gene3D G3DSA:3.40.440.10 1 151 2.7E-53 T 29-03-2018 CKQ55_RS10495 cf628d878590ef2f31042f09687093a2 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.0E-177 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 SUPERFAMILY SSF56935 459 725 6.11E-96 T 29-03-2018 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 SUPERFAMILY SSF56935 24 428 6.11E-96 T 29-03-2018 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 Gene3D G3DSA:2.170.130.10 19 146 1.1E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 Pfam PF00593 TonB dependent receptor 248 721 8.9E-28 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 31 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 39 725 2.6E-151 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 139 4.4E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00675 2b144523ff5cbe2a509958c314ad28d0 725 Gene3D G3DSA:2.40.170.20 147 725 4.9E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 SUPERFAMILY SSF51735 3 246 2.3E-71 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 Gene3D G3DSA:3.40.50.720 36 247 3.4E-59 T 29-03-2018 CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 Gene3D G3DSA:3.40.50.720 1 35 5.2E-7 T 29-03-2018 CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 3.5E-55 T 29-03-2018 CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS17370 f218f710cad8a61884d9b75c8db8c9b9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.1E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS18315 519b0ff5da7269e84d9a171aef631693 379 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 24 367 1.7E-84 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CKQ55_RS18315 519b0ff5da7269e84d9a171aef631693 379 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 17 367 30.906 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CKQ55_RS18315 519b0ff5da7269e84d9a171aef631693 379 PIRSF PIRSF026782 13 374 2.4E-131 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CKQ55_RS18315 519b0ff5da7269e84d9a171aef631693 379 Pfam PF01888 CbiD 17 273 1.1E-93 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CKQ55_RS18315 519b0ff5da7269e84d9a171aef631693 379 Gene3D G3DSA:3.30.2110.10 19 188 4.0E-56 T 29-03-2018 CKQ55_RS18315 519b0ff5da7269e84d9a171aef631693 379 SUPERFAMILY SSF111342 8 291 4.18E-86 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 PIRSF PIRSF016578 114 362 8.8E-21 T 29-03-2018 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 PIRSF PIRSF016578 1 98 2.9E-10 T 29-03-2018 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 237 345 1.6E-10 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 SUPERFAMILY SSF56645 2 203 4.19E-41 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 SUPERFAMILY SSF47203 225 359 3.38E-21 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 Gene3D G3DSA:2.40.110.10 102 194 1.2E-19 T 29-03-2018 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 105 195 6.7E-10 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 Gene3D G3DSA:1.10.540.10 1 94 3.6E-10 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 Gene3D G3DSA:1.20.140.10 195 362 2.9E-20 T 29-03-2018 CKQ55_RS25080 617422f0a789bad04a0ee89503887338 362 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 2 64 7.2E-7 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CKQ55_RS01400 cf6b10b3e882f99832bcd313355cfbc3 338 Gene3D G3DSA:3.40.190.10 25 138 1.9E-9 T 29-03-2018 CKQ55_RS01400 cf6b10b3e882f99832bcd313355cfbc3 338 SUPERFAMILY SSF53850 33 325 1.16E-72 T 29-03-2018 CKQ55_RS01400 cf6b10b3e882f99832bcd313355cfbc3 338 Pfam PF13343 Bacterial extracellular solute-binding protein 81 313 1.2E-24 T 29-03-2018 CKQ55_RS01400 cf6b10b3e882f99832bcd313355cfbc3 338 PIRSF PIRSF002825 1 338 1.9E-80 T 29-03-2018 IPR026045 Ferric binding protein CKQ55_RS01400 cf6b10b3e882f99832bcd313355cfbc3 338 Gene3D G3DSA:3.40.190.10 139 286 1.9E-29 T 29-03-2018 CKQ55_RS01400 cf6b10b3e882f99832bcd313355cfbc3 338 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CKQ55_RS10200 9c985ede39fdc7073e156c30abf0e882 112 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 16 111 5.2E-41 T 29-03-2018 IPR020044 PRD domain protein, EF0829/AHA3910 CKQ55_RS10200 9c985ede39fdc7073e156c30abf0e882 112 Gene3D G3DSA:1.10.1790.10 7 112 8.4E-11 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS10200 9c985ede39fdc7073e156c30abf0e882 112 SUPERFAMILY SSF63520 18 109 9.94E-9 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS29490 2f45529326096858a530bf9e219aad04 454 Gene3D G3DSA:1.20.1250.20 20 222 1.9E-17 T 29-03-2018 CKQ55_RS29490 2f45529326096858a530bf9e219aad04 454 Gene3D G3DSA:1.20.1250.20 225 438 4.8E-17 T 29-03-2018 CKQ55_RS29490 2f45529326096858a530bf9e219aad04 454 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 19 447 3.0E-104 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS29490 2f45529326096858a530bf9e219aad04 454 Pfam PF13347 MFS/sugar transport protein 21 436 9.7E-88 T 29-03-2018 CKQ55_RS29490 2f45529326096858a530bf9e219aad04 454 SUPERFAMILY SSF103473 20 417 5.49E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17815 7316aea9bbd87b86677b739196e8b987 294 SUPERFAMILY SSF103481 45 141 5.1E-13 T 29-03-2018 CKQ55_RS17815 7316aea9bbd87b86677b739196e8b987 294 SUPERFAMILY SSF103481 182 282 2.35E-14 T 29-03-2018 CKQ55_RS17815 7316aea9bbd87b86677b739196e8b987 294 Pfam PF00892 EamA-like transporter family 148 281 8.5E-22 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS17815 7316aea9bbd87b86677b739196e8b987 294 Pfam PF00892 EamA-like transporter family 13 138 6.6E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.87 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 29-03-2018 CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.8E-30 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 Gene3D G3DSA:3.30.160.20 10 72 4.2E-28 T 29-03-2018 CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.7E-29 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 Gene3D G3DSA:3.30.230.10 76 166 6.7E-34 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS15400 cc3fc462d25c45fc36e650bae8ed4a2d 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.2E-71 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 Gene3D G3DSA:1.10.530.10 314 492 2.9E-31 T 29-03-2018 CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 SMART SM00062 66 313 1.8E-12 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 SUPERFAMILY SSF53955 332 485 2.76E-34 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 SUPERFAMILY SSF53850 66 301 5.98E-34 T 29-03-2018 CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 113 300 2.0E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 Pfam PF01464 Transglycosylase SLT domain 334 446 2.6E-16 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS11060 41b87149149e66d89d59896b3ca6fa33 528 Gene3D G3DSA:3.40.190.10 61 209 2.3E-24 T 29-03-2018 CKQ55_RS29670 6f493192fa700b226d689835f5ef0ef2 275 Pfam PF02540 NAD synthase 23 265 2.4E-77 T 29-03-2018 IPR022310 NAD/GMP synthase CKQ55_RS29670 6f493192fa700b226d689835f5ef0ef2 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.299 T 29-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 CKQ55_RS29670 6f493192fa700b226d689835f5ef0ef2 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 275 2.4E-83 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CKQ55_RS29670 6f493192fa700b226d689835f5ef0ef2 275 Gene3D G3DSA:3.40.50.620 2 274 7.6E-58 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS29670 6f493192fa700b226d689835f5ef0ef2 275 SUPERFAMILY SSF52402 3 273 1.97E-85 T 29-03-2018 CKQ55_RS20490 6680108dc526064784f50dc46534dc9b 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 2.9E-29 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS20490 6680108dc526064784f50dc46534dc9b 95 SUPERFAMILY SSF159133 1 94 4.45E-30 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS20490 6680108dc526064784f50dc46534dc9b 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 2.0E-33 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS20490 6680108dc526064784f50dc46534dc9b 95 Gene3D G3DSA:2.40.50.220 2 95 1.1E-31 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 SUPERFAMILY SSF46785 6 90 5.15E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 Gene3D G3DSA:3.40.190.10 180 268 3.2E-27 T 29-03-2018 CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 Gene3D G3DSA:3.40.190.10 92 179 6.9E-12 T 29-03-2018 CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 Pfam PF03466 LysR substrate binding domain 91 295 4.5E-37 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 9.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 SUPERFAMILY SSF53850 92 297 1.07E-40 T 29-03-2018 CKQ55_RS23325 7e7110a43f5e4206ed22e4201b1b11f7 300 Gene3D G3DSA:1.10.10.10 3 90 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS05925 d56078597123b2ba41e118b64e619188 125 PIRSF PIRSF016789 2 123 1.1E-48 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CKQ55_RS05925 d56078597123b2ba41e118b64e619188 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 1.1E-41 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CKQ55_RS14100 76a996b9a7949509282a366ebf524a88 312 SUPERFAMILY SSF53613 5 309 2.96E-84 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS14100 76a996b9a7949509282a366ebf524a88 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS14100 76a996b9a7949509282a366ebf524a88 312 Pfam PF00294 pfkB family carbohydrate kinase 6 306 4.6E-64 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS14100 76a996b9a7949509282a366ebf524a88 312 Gene3D G3DSA:3.40.1190.20 5 312 2.4E-66 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS01795 4c7e0bc7c851f2d216d09242e8f11854 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 29-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 CKQ55_RS01795 4c7e0bc7c851f2d216d09242e8f11854 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 2.9E-42 T 29-03-2018 IPR006214 Bax inhibitor 1-related CKQ55_RS21960 647496e7cf732b1b83b4b6ccd0e24721 155 PIRSF PIRSF006187 1 154 3.4E-44 T 29-03-2018 IPR009736 Protein of unknown function DUF1307 CKQ55_RS21960 647496e7cf732b1b83b4b6ccd0e24721 155 Gene3D G3DSA:3.30.1830.10 29 152 2.1E-37 T 29-03-2018 CKQ55_RS21960 647496e7cf732b1b83b4b6ccd0e24721 155 SUPERFAMILY SSF160704 26 153 2.88E-36 T 29-03-2018 IPR009736 Protein of unknown function DUF1307 CKQ55_RS21960 647496e7cf732b1b83b4b6ccd0e24721 155 Pfam PF06998 Protein of unknown function (DUF1307) 30 150 7.4E-36 T 29-03-2018 IPR009736 Protein of unknown function DUF1307 CKQ55_RS05940 7c40c5f3db1a45c62f8060b41df7e744 311 Pfam PF04754 Putative transposase, YhgA-like 7 208 1.1E-84 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS05940 7c40c5f3db1a45c62f8060b41df7e744 311 Gene3D G3DSA:1.10.10.60 245 309 6.1E-7 T 29-03-2018 CKQ55_RS05940 7c40c5f3db1a45c62f8060b41df7e744 311 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 308 7.3E-53 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS14705 22abc1b1584d5846e949d31ff27987e4 406 Gene3D G3DSA:1.20.1250.20 11 202 5.3E-17 T 29-03-2018 CKQ55_RS14705 22abc1b1584d5846e949d31ff27987e4 406 Gene3D G3DSA:1.20.1250.20 207 404 2.1E-17 T 29-03-2018 CKQ55_RS14705 22abc1b1584d5846e949d31ff27987e4 406 Pfam PF07690 Major Facilitator Superfamily 254 399 3.7E-13 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14705 22abc1b1584d5846e949d31ff27987e4 406 SUPERFAMILY SSF103473 19 394 2.88E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS07065 39a492c4f460da9f36ca2f9c3aad653f 282 Gene3D G3DSA:3.90.850.10 38 281 6.4E-66 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS07065 39a492c4f460da9f36ca2f9c3aad653f 282 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 275 3.6E-57 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS07065 39a492c4f460da9f36ca2f9c3aad653f 282 SUPERFAMILY SSF56529 61 275 1.7E-70 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS18305 d3d3ba2b643bbf90f8c66be7615111a1 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 109.526 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CKQ55_RS18305 d3d3ba2b643bbf90f8c66be7615111a1 319 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 311 5.9E-76 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CKQ55_RS18305 d3d3ba2b643bbf90f8c66be7615111a1 319 Pfam PF03186 CobD/Cbib protein 8 297 2.5E-107 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 Pfam PF03466 LysR substrate binding domain 90 294 1.0E-44 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 SUPERFAMILY SSF46785 5 87 3.95E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 6.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 Gene3D G3DSA:3.40.190.10 90 177 4.3E-14 T 29-03-2018 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 Gene3D G3DSA:3.40.190.10 178 267 1.2E-26 T 29-03-2018 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 SUPERFAMILY SSF53850 90 297 8.87E-46 T 29-03-2018 CKQ55_RS26030 165e4670efadc30882a146168ea5803d 307 Gene3D G3DSA:1.10.10.10 1 89 1.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02530 98032b2d39ec5984fea7eb826641580e 125 Pfam PF00583 Acetyltransferase (GNAT) family 15 101 6.6E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS02530 98032b2d39ec5984fea7eb826641580e 125 Gene3D G3DSA:3.40.630.30 1 125 7.6E-16 T 29-03-2018 CKQ55_RS02530 98032b2d39ec5984fea7eb826641580e 125 SUPERFAMILY SSF55729 3 116 4.96E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 Gene3D G3DSA:3.30.565.10 517 668 1.0E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 SMART SM00388 447 515 3.5E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 SUPERFAMILY SSF47384 443 511 1.43E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 PIRSF PIRSF037119 403 665 3.0E-117 T 29-03-2018 IPR017116 Signal transduction histidine kinase, PgtB CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 PIRSF PIRSF037119 5 407 3.0E-129 T 29-03-2018 IPR017116 Signal transduction histidine kinase, PgtB CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 SMART SM00387 557 663 5.2E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 SMART SM00304 364 416 1.3E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 SUPERFAMILY SSF55874 514 661 1.24E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 512 9.7E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 Gene3D G3DSA:1.10.287.130 406 511 1.7E-6 T 29-03-2018 CKQ55_RS27165 6358be21e489e8c842621d9d6fde821f 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 661 4.0E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS20585 31783fed2cf1f7ca82c63d353c30ac27 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 3.0E-113 T 29-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CKQ55_RS20585 31783fed2cf1f7ca82c63d353c30ac27 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 5.9E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20585 31783fed2cf1f7ca82c63d353c30ac27 277 SUPERFAMILY SSF161098 16 264 2.52E-58 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20585 31783fed2cf1f7ca82c63d353c30ac27 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 7 269 3.1E-114 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CKQ55_RS20585 31783fed2cf1f7ca82c63d353c30ac27 277 Gene3D G3DSA:1.10.3720.10 12 275 5.6E-48 T 29-03-2018 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 Gene3D G3DSA:1.10.3720.10 9 273 9.9E-30 T 29-03-2018 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 367 523 3.5E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 2.3E-8 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 10 525 1.0E-262 T 29-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 SUPERFAMILY SSF161098 9 265 1.3E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 SUPERFAMILY SSF161098 286 527 1.09E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08285 49f47a2e2db276112fc5b244c3931db3 536 Gene3D G3DSA:1.10.3720.10 322 532 4.3E-27 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Gene3D G3DSA:2.40.50.140 96 177 2.2E-6 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SUPERFAMILY SSF50249 429 535 2.29E-21 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Gene3D G3DSA:2.40.50.140 1 92 8.6E-8 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 7.9E-241 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SUPERFAMILY SSF50249 1 112 3.95E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SUPERFAMILY SSF50249 342 440 3.36E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SUPERFAMILY SSF50249 255 363 7.86E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Gene3D G3DSA:2.40.50.140 274 348 2.5E-27 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Gene3D G3DSA:2.40.50.140 361 435 2.3E-20 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Pfam PF00575 S1 RNA binding domain 449 520 7.4E-17 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Pfam PF00575 S1 RNA binding domain 105 171 8.5E-9 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Pfam PF00575 S1 RNA binding domain 20 78 7.8E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SUPERFAMILY SSF50249 106 185 1.4E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 Gene3D G3DSA:2.40.50.140 451 550 2.8E-19 T 29-03-2018 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 PIRSF PIRSF002111 1 534 8.4E-221 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SMART SM00316 19 87 6.8E-5 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SMART SM00316 190 260 2.8E-28 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SMART SM00316 275 347 2.2E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SMART SM00316 362 434 3.4E-21 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SMART SM00316 449 520 1.0E-20 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS02105 9f6803d498aebb1df19211751a868837 557 SMART SM00316 103 171 1.6E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS03270 7cff6dc3b3975f355292926c27d35b46 150 SUPERFAMILY SSF54690 5 150 3.79E-54 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS03270 7cff6dc3b3975f355292926c27d35b46 150 Gene3D G3DSA:3.90.1170.40 2 149 3.7E-56 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS03270 7cff6dc3b3975f355292926c27d35b46 150 Pfam PF02391 MoaE protein 10 121 4.9E-36 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CKQ55_RS31510 33540916cd95b58d0c5a88d4ee7c619d 263 Pfam PF00589 Phage integrase family 45 236 3.9E-46 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS31510 33540916cd95b58d0c5a88d4ee7c619d 263 SUPERFAMILY SSF56349 43 237 5.3E-27 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS31510 33540916cd95b58d0c5a88d4ee7c619d 263 Gene3D G3DSA:1.10.443.10 44 238 2.4E-27 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS31510 33540916cd95b58d0c5a88d4ee7c619d 263 PIRSF PIRSF004576 1 261 8.9E-113 T 29-03-2018 IPR016423 Resolvase, Rsv CKQ55_RS06460 1e4806fe22d76528616c20d2b4969c7a 885 Pfam PF10101 Predicted membrane protein (DUF2339) 135 878 3.7E-147 T 29-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane CKQ55_RS06460 1e4806fe22d76528616c20d2b4969c7a 885 PIRSF PIRSF035905 4 593 9.4E-61 T 29-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CKQ55_RS06460 1e4806fe22d76528616c20d2b4969c7a 885 PIRSF PIRSF035905 518 885 9.2E-18 T 29-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CKQ55_RS28830 70b211d0cb73377a2b442c14e5f703be 240 Pfam PF07103 Protein of unknown function (DUF1365) 5 233 5.3E-72 T 29-03-2018 IPR010775 Protein of unknown function DUF1365 CKQ55_RS12945 cf1815acf91b83dd300b1cf68aef0be0 723 Pfam PF13229 Right handed beta helix region 455 626 4.5E-9 T 29-03-2018 CKQ55_RS12945 cf1815acf91b83dd300b1cf68aef0be0 723 SUPERFAMILY SSF51126 373 706 1.5E-48 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS12945 cf1815acf91b83dd300b1cf68aef0be0 723 SMART SM00710 538 560 200.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CKQ55_RS12945 cf1815acf91b83dd300b1cf68aef0be0 723 SMART SM00710 567 589 1500.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat CKQ55_RS12945 cf1815acf91b83dd300b1cf68aef0be0 723 SMART SM00710 475 497 4.1 T 29-03-2018 IPR006626 Parallel beta-helix repeat CKQ55_RS12945 cf1815acf91b83dd300b1cf68aef0be0 723 Gene3D G3DSA:2.160.20.10 366 719 1.2E-34 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS28390 007f2b72581844f7a7d28255193c1d2c 150 Pfam PF00583 Acetyltransferase (GNAT) family 43 127 8.8E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS28390 007f2b72581844f7a7d28255193c1d2c 150 SUPERFAMILY SSF55729 39 149 1.01E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS28390 007f2b72581844f7a7d28255193c1d2c 150 Gene3D G3DSA:3.40.630.30 2 150 3.7E-15 T 29-03-2018 CKQ55_RS02350 5fe286bf911acc6b93b8c369025d16df 242 PIRSF PIRSF039085 1 242 2.4E-85 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS02350 5fe286bf911acc6b93b8c369025d16df 242 Gene3D G3DSA:3.40.50.300 1 242 3.4E-66 T 29-03-2018 CKQ55_RS02350 5fe286bf911acc6b93b8c369025d16df 242 SMART SM00382 27 218 6.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02350 5fe286bf911acc6b93b8c369025d16df 242 Pfam PF00005 ABC transporter 20 170 1.6E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS02350 5fe286bf911acc6b93b8c369025d16df 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS02350 5fe286bf911acc6b93b8c369025d16df 242 SUPERFAMILY SSF52540 3 233 1.0E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 SUPERFAMILY SSF103473 3 385 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 Gene3D G3DSA:1.20.1250.20 3 185 8.8E-27 T 29-03-2018 CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 PRINTS PR01035 Tetracycline resistance protein signature 10 26 7.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 PRINTS PR01035 Tetracycline resistance protein signature 158 178 7.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 PRINTS PR01035 Tetracycline resistance protein signature 98 119 7.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 PRINTS PR01035 Tetracycline resistance protein signature 40 59 7.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 Gene3D G3DSA:1.20.1250.20 194 387 1.7E-24 T 29-03-2018 CKQ55_RS07395 855f3dcbb079f85c26f67bca085f58bf 396 Pfam PF07690 Major Facilitator Superfamily 9 319 9.3E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS01775 86579d6d0541e1f7cd650fa51ea49729 470 Pfam PF03573 outer membrane porin, OprD family 40 469 1.8E-17 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CKQ55_RS01775 86579d6d0541e1f7cd650fa51ea49729 470 Gene3D G3DSA:2.40.160.10 43 470 1.3E-53 T 29-03-2018 CKQ55_RS03335 6df91914ca1cf075c8c307f134a18410 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.7E-63 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CKQ55_RS03335 6df91914ca1cf075c8c307f134a18410 240 PIRSF PIRSF006755 1 231 4.3E-82 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CKQ55_RS03335 6df91914ca1cf075c8c307f134a18410 240 Pfam PF13500 AAA domain 4 210 3.4E-40 T 29-03-2018 CKQ55_RS03335 6df91914ca1cf075c8c307f134a18410 240 SUPERFAMILY SSF52540 3 211 1.45E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03335 6df91914ca1cf075c8c307f134a18410 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 30.459 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CKQ55_RS03335 6df91914ca1cf075c8c307f134a18410 240 Gene3D G3DSA:3.40.50.300 1 218 4.5E-58 T 29-03-2018 CKQ55_RS25435 2e8f8b49af9bee35f3b63657e74ce547 567 Gene3D G3DSA:3.40.190.10 197 333 1.8E-24 T 29-03-2018 CKQ55_RS25435 2e8f8b49af9bee35f3b63657e74ce547 567 Gene3D G3DSA:3.90.76.10 79 196 5.6E-30 T 29-03-2018 CKQ55_RS25435 2e8f8b49af9bee35f3b63657e74ce547 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 485 1.5E-81 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS25435 2e8f8b49af9bee35f3b63657e74ce547 567 SUPERFAMILY SSF53850 60 555 5.43E-116 T 29-03-2018 CKQ55_RS25435 2e8f8b49af9bee35f3b63657e74ce547 567 PIRSF PIRSF002741 17 559 8.6E-99 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS25435 2e8f8b49af9bee35f3b63657e74ce547 567 Gene3D G3DSA:3.10.105.10 334 534 4.4E-51 T 29-03-2018 CKQ55_RS21185 ae104fc676eb8be4a526717f0e858c12 178 SUPERFAMILY SSF49401 26 178 2.49E-30 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS21185 ae104fc676eb8be4a526717f0e858c12 178 Gene3D G3DSA:2.60.40.1090 25 178 3.5E-33 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS21185 ae104fc676eb8be4a526717f0e858c12 178 Pfam PF00419 Fimbrial protein 31 178 1.6E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS06290 59817e68b542f6422f717502afbf5af0 272 SUPERFAMILY SSF51658 3 269 2.63E-58 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS06290 59817e68b542f6422f717502afbf5af0 272 Gene3D G3DSA:3.20.20.150 1 268 1.3E-34 T 29-03-2018 CKQ55_RS06290 59817e68b542f6422f717502afbf5af0 272 Pfam PF01261 Xylose isomerase-like TIM barrel 22 198 6.8E-17 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 PIRSF PIRSF000423 1 442 6.0E-209 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 233.917 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 Pfam PF00696 Amino acid kinase family 26 268 4.8E-34 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 Pfam PF00583 Acetyltransferase (GNAT) family 336 413 6.4E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 Gene3D G3DSA:3.40.1160.10 7 294 4.5E-56 T 29-03-2018 CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 8.1E-198 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 SUPERFAMILY SSF53633 5 291 1.44E-69 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 SUPERFAMILY SSF55729 229 418 5.23E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS18155 48026009f753967609aadf741d01bf86 443 Gene3D G3DSA:3.40.630.30 297 442 9.4E-21 T 29-03-2018 CKQ55_RS03160 ee5ecc0661e225377cc5cfaf393e581d 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 44.558 T 29-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 CKQ55_RS03160 ee5ecc0661e225377cc5cfaf393e581d 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 2.3E-14 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CKQ55_RS03160 ee5ecc0661e225377cc5cfaf393e581d 225 SMART SM00702 1 176 3.8E-26 T 29-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CKQ55_RS03160 ee5ecc0661e225377cc5cfaf393e581d 225 SUPERFAMILY SSF51197 5 176 1.29E-5 T 29-03-2018 CKQ55_RS03160 ee5ecc0661e225377cc5cfaf393e581d 225 Gene3D G3DSA:2.60.120.620 1 186 6.1E-30 T 29-03-2018 CKQ55_RS21930 038f72b37deb60941f48ca3a0b27d9c7 245 SUPERFAMILY SSF161098 46 233 1.96E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21930 038f72b37deb60941f48ca3a0b27d9c7 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 239 5.0E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS21930 038f72b37deb60941f48ca3a0b27d9c7 245 Gene3D G3DSA:1.10.3720.10 7 244 1.3E-27 T 29-03-2018 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.8E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 5.8E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 5.8E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 280 5.8E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 5.8E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 233 250 5.8E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 305 321 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 SUPERFAMILY SSF56935 22 350 5.19E-80 T 29-03-2018 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.5E-15 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 305 322 1.5E-15 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.5E-15 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.5E-15 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 227 239 1.5E-15 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 Gene3D G3DSA:2.40.160.10 6 350 1.2E-53 T 29-03-2018 CKQ55_RS06895 0dc519f733fb7ab7146de3bc4fc3f3f1 350 Pfam PF00267 Gram-negative porin 27 350 9.2E-145 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS07880 17b3b5c84d933655c22f127bda99423d 185 Gene3D G3DSA:2.60.40.1090 31 185 1.2E-13 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07880 17b3b5c84d933655c22f127bda99423d 185 SUPERFAMILY SSF49401 33 185 8.95E-11 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS14540 b1a580a283ef52bb39a1d14bb29bfd9b 277 Gene3D G3DSA:1.10.3720.10 10 272 1.0E-31 T 29-03-2018 CKQ55_RS14540 b1a580a283ef52bb39a1d14bb29bfd9b 277 SUPERFAMILY SSF161098 66 255 1.64E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14540 b1a580a283ef52bb39a1d14bb29bfd9b 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 2.7E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14540 b1a580a283ef52bb39a1d14bb29bfd9b 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 3.2E-117 T 29-03-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 SUPERFAMILY SSF100879 246 345 8.37E-6 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Pfam PF13438 Domain of unknown function (DUF4113) 370 420 3.7E-22 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Pfam PF00817 impB/mucB/samB family 6 149 1.9E-34 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:3.30.1490.100 249 362 3.5E-25 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 350 6.0E-14 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Pfam PF11798 IMS family HHH motif 171 199 2.5E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:1.10.150.20 173 248 2.7E-15 T 29-03-2018 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 SUPERFAMILY SSF56672 1 236 1.69E-67 T 29-03-2018 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:3.30.70.270 37 113 7.0E-15 T 29-03-2018 CKQ55_RS30090 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:3.30.70.270 114 172 1.3E-11 T 29-03-2018 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 SUPERFAMILY SSF100879 246 345 8.37E-6 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Pfam PF13438 Domain of unknown function (DUF4113) 370 420 3.7E-22 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Pfam PF00817 impB/mucB/samB family 6 149 1.9E-34 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:3.30.1490.100 249 362 3.5E-25 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 350 6.0E-14 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Pfam PF11798 IMS family HHH motif 171 199 2.5E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:1.10.150.20 173 248 2.7E-15 T 29-03-2018 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 SUPERFAMILY SSF56672 1 236 1.69E-67 T 29-03-2018 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:3.30.70.270 37 113 7.0E-15 T 29-03-2018 CKQ55_RS00150 96c21be4c32cd795ed297184737fded7 421 Gene3D G3DSA:3.30.70.270 114 172 1.3E-11 T 29-03-2018 CKQ55_RS19600 51fc9023288ea68f3748810edcb4da40 537 Gene3D G3DSA:1.20.5.1000 183 243 0.049 T 29-03-2018 CKQ55_RS19600 51fc9023288ea68f3748810edcb4da40 537 Gene3D G3DSA:1.20.5.1000 77 182 0.073 T 29-03-2018 CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 SUPERFAMILY SSF53335 296 327 3.88E-60 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 SUPERFAMILY SSF53335 182 262 3.88E-60 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 SUPERFAMILY SSF53335 589 645 3.88E-60 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 SUPERFAMILY SSF53335 5 150 3.88E-60 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 Gene3D G3DSA:3.90.120.10 472 636 2.2E-11 T 29-03-2018 CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 Gene3D G3DSA:3.40.50.150 4 234 4.2E-38 T 29-03-2018 CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 Pfam PF00145 C-5 cytosine-specific DNA methylase 587 645 1.7E-4 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02860 c7451e1433954e993c7d7336b9ffed0d 660 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 121 1.9E-6 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 Gene3D G3DSA:3.40.50.720 1 161 1.8E-72 T 29-03-2018 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 SMART SM00846 2 152 6.1E-92 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 SUPERFAMILY SSF55347 152 315 1.9E-66 T 29-03-2018 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.1E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 2.0E-61 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 1.6E-125 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 PIRSF PIRSF000149 1 336 9.9E-130 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 SUPERFAMILY SSF51735 2 179 6.35E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 Gene3D G3DSA:3.30.360.10 162 316 2.6E-63 T 29-03-2018 CKQ55_RS28410 2e836821f250cb030b642928f3f34d4a 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 101 1.2E-38 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS16355 bc4502262de10ad10dc7a807fe1b1ce2 122 Pfam PF06476 Protein of unknown function (DUF1090) 10 116 4.2E-37 T 29-03-2018 IPR009468 Protein of unknown function DUF1090 CKQ55_RS16355 bc4502262de10ad10dc7a807fe1b1ce2 122 Gene3D G3DSA:1.20.1170.10 12 120 9.9E-5 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 Gene3D G3DSA:1.20.1250.20 12 198 1.8E-28 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 432 3.8E-79 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 Gene3D G3DSA:1.20.1250.20 256 464 4.3E-22 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 SUPERFAMILY SSF103473 14 195 2.22E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 SUPERFAMILY SSF103473 245 453 2.22E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 5.8E-9 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 5.8E-9 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 5.8E-9 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 5.8E-9 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 5.8E-9 T 29-03-2018 CKQ55_RS12825 687822fa848d66ad93880332e53b781f 465 Pfam PF07690 Major Facilitator Superfamily 17 406 6.6E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 PRINTS PR00171 Sugar transporter signature 108 127 3.5E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 PRINTS PR00171 Sugar transporter signature 24 34 3.5E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 PRINTS PR00171 Sugar transporter signature 278 288 3.5E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 PRINTS PR00171 Sugar transporter signature 363 384 3.5E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 PRINTS PR00171 Sugar transporter signature 386 398 3.5E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 Pfam PF00083 Sugar (and other) transporter 16 460 1.2E-109 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 SUPERFAMILY SSF103473 8 460 8.37E-73 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 457 6.1E-108 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 Gene3D G3DSA:1.20.1250.20 2 224 7.5E-37 T 29-03-2018 CKQ55_RS20075 5e881ceb31d01731ffacf31c40607d7e 478 Gene3D G3DSA:1.20.1250.20 242 475 3.2E-35 T 29-03-2018 CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 Pfam PF02264 LamB porin 97 505 2.9E-103 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 55 3.8E-19 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 Gene3D G3DSA:3.90.20.10 12 104 3.7E-4 T 29-03-2018 CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 101 501 0.0 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 SUPERFAMILY SSF57997 22 92 7.85E-6 T 29-03-2018 CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 SUPERFAMILY SSF56935 94 505 2.06E-142 T 29-03-2018 CKQ55_RS05055 794c352a5cfc827d3fcde7e584777669 505 Gene3D G3DSA:2.40.170.10 105 505 1.3E-118 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS27595 756a039857119028c5a54539c3e1a951 159 Gene3D G3DSA:3.40.630.30 1 156 2.9E-25 T 29-03-2018 CKQ55_RS27595 756a039857119028c5a54539c3e1a951 159 SUPERFAMILY SSF55729 1 150 1.05E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS27595 756a039857119028c5a54539c3e1a951 159 Pfam PF00583 Acetyltransferase (GNAT) family 61 145 3.0E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS23235 2d16a659a5dcaa13bc3f65cf8947f319 127 Gene3D G3DSA:3.30.429.10 1 124 3.6E-27 T 29-03-2018 CKQ55_RS23235 2d16a659a5dcaa13bc3f65cf8947f319 127 SUPERFAMILY SSF55331 2 120 2.82E-22 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CKQ55_RS23235 2d16a659a5dcaa13bc3f65cf8947f319 127 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 119 2.0E-6 T 29-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 CKQ55_RS27850 f9df3a1ee8428de6ea1d2d58fa7aa837 436 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 20 423 1.8E-124 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS27850 f9df3a1ee8428de6ea1d2d58fa7aa837 436 Gene3D G3DSA:1.20.1250.20 5 207 4.5E-37 T 29-03-2018 CKQ55_RS27850 f9df3a1ee8428de6ea1d2d58fa7aa837 436 PIRSF PIRSF002808 5 428 8.1E-40 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS27850 f9df3a1ee8428de6ea1d2d58fa7aa837 436 Gene3D G3DSA:1.20.1250.20 216 432 2.2E-25 T 29-03-2018 CKQ55_RS27850 f9df3a1ee8428de6ea1d2d58fa7aa837 436 SUPERFAMILY SSF103473 7 423 1.7E-75 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27850 f9df3a1ee8428de6ea1d2d58fa7aa837 436 Pfam PF07690 Major Facilitator Superfamily 18 305 2.9E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 SUPERFAMILY SSF50249 16 101 1.26E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 Gene3D G3DSA:3.30.930.10 128 462 8.5E-95 T 29-03-2018 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.97 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.5E-210 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 Gene3D G3DSA:2.40.50.140 8 108 6.3E-17 T 29-03-2018 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 SUPERFAMILY SSF55681 104 465 5.38E-96 T 29-03-2018 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 7.2E-82 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS02000 fd77b8fd8286b5421a618238118a7010 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.4E-11 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CKQ55_RS14365 5e3d465362c33c2652c4d19482461a7d 373 Gene3D G3DSA:3.40.50.1970 10 182 1.2E-38 T 29-03-2018 CKQ55_RS14365 5e3d465362c33c2652c4d19482461a7d 373 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS14365 5e3d465362c33c2652c4d19482461a7d 373 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 363 2.6E-89 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS14365 5e3d465362c33c2652c4d19482461a7d 373 Gene3D G3DSA:1.20.1090.10 184 373 7.4E-40 T 29-03-2018 CKQ55_RS14365 5e3d465362c33c2652c4d19482461a7d 373 SUPERFAMILY SSF56796 5 372 9.94E-84 T 29-03-2018 CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 SUPERFAMILY SSF53955 87 348 1.86E-60 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 Gene3D G3DSA:1.10.530.10 85 341 3.6E-66 T 29-03-2018 CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 SMART SM00089 435 523 4.5E-6 T 29-03-2018 IPR022409 PKD/Chitinase domain CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 Pfam PF00182 Chitinase class I 106 335 3.3E-33 T 29-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 SUPERFAMILY SSF49299 431 522 1.18E-8 T 29-03-2018 IPR000601 PKD domain CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 Gene3D G3DSA:2.60.40.10 425 522 4.3E-15 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS07525 34881c89934903b734227fe348b3e8d5 596 Gene3D G3DSA:2.10.10.20 538 596 1.1E-8 T 29-03-2018 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 SUPERFAMILY SSF46689 210 260 7.35E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 SUPERFAMILY SSF52317 5 192 1.25E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 Pfam PF12833 Helix-turn-helix domain 233 311 9.0E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 Gene3D G3DSA:3.40.50.880 2 209 2.5E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 SMART SM00342 227 310 1.7E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 SUPERFAMILY SSF46689 264 314 8.06E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 Gene3D G3DSA:1.10.10.60 265 317 1.1E-11 T 29-03-2018 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 Gene3D G3DSA:1.10.10.60 210 264 4.5E-12 T 29-03-2018 CKQ55_RS13445 d7f19a86cb1d45680dc8806a0df16374 317 Pfam PF01965 DJ-1/PfpI family 66 171 1.7E-7 T 29-03-2018 IPR002818 DJ-1/PfpI CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 Gene3D G3DSA:3.40.50.300 5 234 1.0E-49 T 29-03-2018 CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 SUPERFAMILY SSF52540 242 482 2.13E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 SMART SM00382 34 253 1.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 SMART SM00382 282 476 7.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 Pfam PF00005 ABC transporter 275 427 3.9E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 Pfam PF00005 ABC transporter 25 175 5.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 SUPERFAMILY SSF52540 8 226 6.22E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS26835 490b7f2dd8e36d291af646a32265ea14 510 Gene3D G3DSA:3.40.50.300 264 501 5.0E-40 T 29-03-2018 CKQ55_RS24230 398889652f8e873d9682f923af0b6076 362 SMART SM00382 28 213 2.1E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24230 398889652f8e873d9682f923af0b6076 362 Pfam PF00005 ABC transporter 21 165 7.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24230 398889652f8e873d9682f923af0b6076 362 SUPERFAMILY SSF52540 1 241 3.6E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24230 398889652f8e873d9682f923af0b6076 362 Gene3D G3DSA:3.40.50.300 1 252 3.0E-67 T 29-03-2018 CKQ55_RS04365 c6072327ea7d7efaca1eff6270ebf284 354 SUPERFAMILY SSF53822 38 308 1.67E-44 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS04365 c6072327ea7d7efaca1eff6270ebf284 354 Gene3D G3DSA:3.40.50.2300 29 161 8.6E-17 T 29-03-2018 CKQ55_RS04365 c6072327ea7d7efaca1eff6270ebf284 354 Gene3D G3DSA:3.40.50.2300 162 303 5.7E-21 T 29-03-2018 CKQ55_RS04365 c6072327ea7d7efaca1eff6270ebf284 354 Pfam PF13407 Periplasmic binding protein domain 51 298 8.3E-29 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS06735 e372b9e080e1637e034e35a0e8eb1e1a 258 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 5 239 6.5E-90 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS06735 e372b9e080e1637e034e35a0e8eb1e1a 258 PIRSF PIRSF018982 1 249 3.4E-91 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS22810 64e38c8ef52847ffa085deaa6a16711e 266 Gene3D G3DSA:3.10.50.40 116 251 1.1E-21 T 29-03-2018 CKQ55_RS22810 64e38c8ef52847ffa085deaa6a16711e 266 TIGRFAM TIGR02933 nifM_nitrog: nitrogen fixation protein NifM 6 258 1.5E-119 T 29-03-2018 IPR014282 Nitrogen fixation protein NifM CKQ55_RS22810 64e38c8ef52847ffa085deaa6a16711e 266 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 161 181 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CKQ55_RS22810 64e38c8ef52847ffa085deaa6a16711e 266 SUPERFAMILY SSF54534 117 219 3.21E-22 T 29-03-2018 CKQ55_RS22810 64e38c8ef52847ffa085deaa6a16711e 266 Pfam PF00639 PPIC-type PPIASE domain 131 220 1.5E-17 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CKQ55_RS18870 2364a12abda9c3345d5ce02761f2ffbe 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 452 4.0E-63 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CKQ55_RS18870 2364a12abda9c3345d5ce02761f2ffbe 465 SUPERFAMILY SSF56954 3 453 9.02E-83 T 29-03-2018 CKQ55_RS18870 2364a12abda9c3345d5ce02761f2ffbe 465 Gene3D G3DSA:1.20.1600.10 20 459 1.3E-72 T 29-03-2018 CKQ55_RS18870 2364a12abda9c3345d5ce02761f2ffbe 465 Pfam PF02321 Outer membrane efflux protein 62 245 5.5E-22 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS18870 2364a12abda9c3345d5ce02761f2ffbe 465 Pfam PF02321 Outer membrane efflux protein 273 446 8.1E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS05530 10003b0e778dfa8a4804a3d7c6227128 165 Pfam PF06530 Phage antitermination protein Q 13 96 7.9E-10 T 29-03-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 CKQ55_RS04930 ecda4e5e28efa8423b2a4568cce7c340 205 Gene3D G3DSA:1.10.1270.10 98 202 3.7E-6 T 29-03-2018 CKQ55_RS04930 ecda4e5e28efa8423b2a4568cce7c340 205 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 9 195 7.0E-29 T 29-03-2018 CKQ55_RS04930 ecda4e5e28efa8423b2a4568cce7c340 205 SMART SM00421 148 205 0.0097 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS04930 ecda4e5e28efa8423b2a4568cce7c340 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 200 4.1E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS04930 ecda4e5e28efa8423b2a4568cce7c340 205 SUPERFAMILY SSF46894 143 200 1.63E-6 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 3.3E-144 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 SUPERFAMILY SSF55729 1 337 1.61E-132 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 2.7E-159 T 29-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 343 70.573 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.1E-148 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 Gene3D G3DSA:3.40.630.30 1 273 2.8E-26 T 29-03-2018 CKQ55_RS29715 8af9b7094df9aa5b13ac031a3d80257c 344 Gene3D G3DSA:2.40.40.20 274 337 9.0E-23 T 29-03-2018 CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.9E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.9E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.9E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 Gene3D G3DSA:3.40.50.720 6 241 2.4E-39 T 29-03-2018 CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 239 4.8E-26 T 29-03-2018 CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS25890 4661195ed23f6a282a891af1fb72cd77 241 SUPERFAMILY SSF51735 7 240 1.65E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS10570 41496d31fbd9df1bf308cb2b34da407f 261 Gene3D G3DSA:3.40.190.10 162 261 1.5E-13 T 29-03-2018 CKQ55_RS10570 41496d31fbd9df1bf308cb2b34da407f 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 3.0E-60 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS10570 41496d31fbd9df1bf308cb2b34da407f 261 SMART SM00079 42 261 0.001 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS10570 41496d31fbd9df1bf308cb2b34da407f 261 SMART SM00062 40 261 4.6E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS10570 41496d31fbd9df1bf308cb2b34da407f 261 SUPERFAMILY SSF53850 19 260 7.47E-61 T 29-03-2018 CKQ55_RS10570 41496d31fbd9df1bf308cb2b34da407f 261 Gene3D G3DSA:3.40.190.10 12 161 3.4E-33 T 29-03-2018 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Gene3D G3DSA:2.20.28.20 144 180 0.27 T 29-03-2018 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Gene3D G3DSA:3.30.65.10 8 56 5.6E-18 T 29-03-2018 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Gene3D G3DSA:3.30.65.10 57 99 9.1E-16 T 29-03-2018 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Gene3D G3DSA:3.30.65.10 100 143 3.2E-12 T 29-03-2018 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 61 98 3.5E-17 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 140 3.3E-15 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 8.4E-17 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 168 0.095 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 SUPERFAMILY SSF57783 12 49 1.07E-13 T 29-03-2018 CKQ55_RS15500 d49890886849d8355d023f16754d8ea4 180 SUPERFAMILY SSF57783 60 100 7.14E-13 T 29-03-2018 CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 SUPERFAMILY SSF103473 267 454 1.83E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 SUPERFAMILY SSF103473 9 203 1.83E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 441 1.4E-183 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 Gene3D G3DSA:1.20.1250.20 11 209 9.6E-34 T 29-03-2018 CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 53.692 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 Pfam PF07690 Major Facilitator Superfamily 26 287 4.1E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS15835 3a87308f5a4c1c65fa6414fb789690ef 495 Gene3D G3DSA:1.20.1250.20 267 465 1.4E-18 T 29-03-2018 CKQ55_RS27075 a4ad99bc8f60e55261915df72945612c 281 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 20 275 3.1E-63 T 29-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CKQ55_RS27075 a4ad99bc8f60e55261915df72945612c 281 Gene3D G3DSA:3.20.20.380 41 281 3.5E-23 T 29-03-2018 CKQ55_RS27075 a4ad99bc8f60e55261915df72945612c 281 SUPERFAMILY SSF51366 9 274 2.2E-30 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS27075 a4ad99bc8f60e55261915df72945612c 281 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 45 221 8.0E-66 T 29-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CKQ55_RS27075 a4ad99bc8f60e55261915df72945612c 281 Pfam PF03437 BtpA family 19 275 4.1E-67 T 29-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CKQ55_RS27075 a4ad99bc8f60e55261915df72945612c 281 PIRSF PIRSF005956 10 280 1.1E-99 T 29-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PIRSF PIRSF001522 1 312 5.9E-142 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 SUPERFAMILY SSF69917 25 312 3.4E-108 T 29-03-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 Pfam PF01278 Omptin family 31 312 4.0E-127 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 186 207 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 143 170 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 208 229 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 255 275 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 38 52 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 83 108 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 234 254 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 115 142 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 PRINTS PR00482 Omptin serine protease signature 57 82 1.7E-99 T 29-03-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 Gene3D G3DSA:2.40.128.90 21 312 1.4E-63 T 29-03-2018 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 29-03-2018 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 CKQ55_RS28675 b4511ec1ba9c44079d8aee84cb2b9121 312 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 29-03-2018 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 Gene3D G3DSA:3.40.190.10 88 175 1.0E-14 T 29-03-2018 CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 Gene3D G3DSA:1.10.10.10 3 86 1.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 Pfam PF03466 LysR substrate binding domain 87 291 1.1E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 61 1.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 SUPERFAMILY SSF46785 7 111 9.67E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 Gene3D G3DSA:3.40.190.10 176 262 1.3E-21 T 29-03-2018 CKQ55_RS21355 8a874728ae981e138daf36a2f9ee1c17 318 SUPERFAMILY SSF53850 88 294 5.61E-43 T 29-03-2018 CKQ55_RS07080 3bce257afd5e66a782b34d6c94262d4a 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS07080 3bce257afd5e66a782b34d6c94262d4a 465 Gene3D G3DSA:1.20.1250.20 251 464 2.4E-28 T 29-03-2018 CKQ55_RS07080 3bce257afd5e66a782b34d6c94262d4a 465 Gene3D G3DSA:1.20.1250.20 24 240 4.6E-35 T 29-03-2018 CKQ55_RS07080 3bce257afd5e66a782b34d6c94262d4a 465 SUPERFAMILY SSF103473 26 462 8.63E-81 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS07080 3bce257afd5e66a782b34d6c94262d4a 465 Pfam PF00083 Sugar (and other) transporter 73 463 9.0E-48 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS08695 c2e9dafb0270aeccaa14d4171367e10f 452 PIRSF PIRSF004548 1 449 4.1E-164 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CKQ55_RS08695 c2e9dafb0270aeccaa14d4171367e10f 452 Pfam PF06123 Inner membrane protein CreD 6 427 4.4E-136 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 SUPERFAMILY SSF103473 18 451 7.98E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 Gene3D G3DSA:1.20.1250.20 246 462 1.5E-18 T 29-03-2018 CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 8.8E-148 T 29-03-2018 CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 PIRSF PIRSF002808 9 461 1.7E-103 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 Gene3D G3DSA:1.20.1250.20 24 228 1.5E-23 T 29-03-2018 CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 Pfam PF07690 Major Facilitator Superfamily 35 397 9.6E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS13250 190076561b5ea442463a46a671ef05e9 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CKQ55_RS28825 e82e9a2d86aee15cdb31e7f15f7276aa 419 SUPERFAMILY SSF51905 382 413 3.56E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28825 e82e9a2d86aee15cdb31e7f15f7276aa 419 SUPERFAMILY SSF51905 1 301 3.56E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS28825 e82e9a2d86aee15cdb31e7f15f7276aa 419 Gene3D G3DSA:3.40.50.720 1 43 4.6E-6 T 29-03-2018 CKQ55_RS28825 e82e9a2d86aee15cdb31e7f15f7276aa 419 Gene3D G3DSA:3.90.660.20 44 359 2.0E-32 T 29-03-2018 CKQ55_RS28825 e82e9a2d86aee15cdb31e7f15f7276aa 419 Pfam PF01593 Flavin containing amine oxidoreductase 10 277 9.0E-19 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CKQ55_RS17390 e1d246b46b42978655c93884cec6c1fe 103 SUPERFAMILY SSF88697 1 102 1.74E-31 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS17390 e1d246b46b42978655c93884cec6c1fe 103 Pfam PF04266 ASCH domain 6 102 3.8E-14 T 29-03-2018 IPR007374 ASCH domain CKQ55_RS17390 e1d246b46b42978655c93884cec6c1fe 103 SMART SM01022 6 103 1.9E-27 T 29-03-2018 IPR007374 ASCH domain CKQ55_RS17390 e1d246b46b42978655c93884cec6c1fe 103 Gene3D G3DSA:2.30.130.30 1 103 3.3E-20 T 29-03-2018 CKQ55_RS17390 e1d246b46b42978655c93884cec6c1fe 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 30.938 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CKQ55_RS17390 e1d246b46b42978655c93884cec6c1fe 103 PIRSF PIRSF029143 1 103 2.8E-48 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CKQ55_RS27340 7e4f12be182eda41a88efdfcbcea2c34 146 SUPERFAMILY SSF89872 33 145 5.75E-42 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 CKQ55_RS27340 7e4f12be182eda41a88efdfcbcea2c34 146 PIRSF PIRSF009103 1 143 1.1E-34 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 CKQ55_RS27340 7e4f12be182eda41a88efdfcbcea2c34 146 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 34 141 8.6E-28 T 29-03-2018 CKQ55_RS27340 7e4f12be182eda41a88efdfcbcea2c34 146 Gene3D G3DSA:3.40.1420.10 24 140 4.1E-34 T 29-03-2018 CKQ55_RS09380 42af2328ec4d55dad65be0200d07bfef 109 Pfam PF00893 Small Multidrug Resistance protein 6 96 7.8E-23 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CKQ55_RS09380 42af2328ec4d55dad65be0200d07bfef 109 SUPERFAMILY SSF103481 8 107 2.22E-18 T 29-03-2018 CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 SUPERFAMILY SSF49584 136 222 1.7E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 SUPERFAMILY SSF49354 18 142 3.27E-36 T 29-03-2018 IPR008962 PapD-like CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 Gene3D G3DSA:2.60.40.10 23 143 1.0E-30 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 222 1.3E-5 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 Gene3D G3DSA:2.60.40.10 145 230 5.6E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 142 7.5E-36 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 PRINTS PR00969 Pili chaperone signature 160 175 2.7E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 PRINTS PR00969 Pili chaperone signature 68 89 2.7E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 PRINTS PR00969 Pili chaperone signature 98 115 2.7E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 PRINTS PR00969 Pili chaperone signature 124 139 2.7E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS10670 6189a3ddb72a4e93386fe0564a82bf9a 230 PRINTS PR00969 Pili chaperone signature 24 33 2.7E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS11375 3201114a2c288706570143a08be8b40b 134 SUPERFAMILY SSF88697 4 132 6.71E-43 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS11375 3201114a2c288706570143a08be8b40b 134 PIRSF PIRSF021320 2 134 7.2E-43 T 29-03-2018 IPR009326 Protein of unknown function DUF984 CKQ55_RS11375 3201114a2c288706570143a08be8b40b 134 SMART SM01022 15 132 4.5E-40 T 29-03-2018 IPR007374 ASCH domain CKQ55_RS11375 3201114a2c288706570143a08be8b40b 134 Gene3D G3DSA:3.10.400.10 1 134 1.3E-45 T 29-03-2018 CKQ55_RS11375 3201114a2c288706570143a08be8b40b 134 Pfam PF04266 ASCH domain 23 131 1.2E-21 T 29-03-2018 IPR007374 ASCH domain CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 Gene3D G3DSA:3.40.190.10 174 257 2.3E-14 T 29-03-2018 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 Pfam PF03466 LysR substrate binding domain 91 287 1.2E-34 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.5E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 SUPERFAMILY SSF53850 91 291 6.15E-35 T 29-03-2018 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 Gene3D G3DSA:3.40.190.10 79 173 2.1E-18 T 29-03-2018 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.7E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 SUPERFAMILY SSF46785 5 85 3.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23110 8c86145b18dcf95f87acd1f22d14eebc 308 Gene3D G3DSA:1.10.10.10 6 78 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18680 7f72d6ffcbc5fb43a18c4ec41212d068 97 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 8.2E-39 T 29-03-2018 IPR010152 CRISPR-associated protein Cas2 subtype CKQ55_RS18680 7f72d6ffcbc5fb43a18c4ec41212d068 97 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 2.4E-36 T 29-03-2018 IPR010152 CRISPR-associated protein Cas2 subtype CKQ55_RS25920 c5ee0102b6b1dfa8d4f08973d2551e99 62 Pfam PF15930 Domain of unknown function 1 62 9.1E-41 T 29-03-2018 IPR031830 Uncharacterised protein YdiH CKQ55_RS24875 2cad0da88de40d7eb6af81c7f532b297 136 Gene3D G3DSA:3.10.129.10 1 136 6.9E-29 T 29-03-2018 CKQ55_RS24875 2cad0da88de40d7eb6af81c7f532b297 136 SUPERFAMILY SSF54637 9 135 4.73E-29 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS24875 2cad0da88de40d7eb6af81c7f532b297 136 Pfam PF03061 Thioesterase superfamily 50 127 1.6E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CKQ55_RS24875 2cad0da88de40d7eb6af81c7f532b297 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 46.263 T 29-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 CKQ55_RS24875 2cad0da88de40d7eb6af81c7f532b297 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 2.7E-46 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CKQ55_RS19370 f9a43d66e650c1de1d12a80f88b6bc1e 320 PIRSF PIRSF000355 1 317 6.5E-79 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19370 f9a43d66e650c1de1d12a80f88b6bc1e 320 SUPERFAMILY SSF47240 7 320 5.27E-100 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS19370 f9a43d66e650c1de1d12a80f88b6bc1e 320 Gene3D G3DSA:1.10.620.20 1 293 4.3E-75 T 29-03-2018 CKQ55_RS19370 f9a43d66e650c1de1d12a80f88b6bc1e 320 Pfam PF00268 Ribonucleotide reductase, small chain 10 281 2.4E-84 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS19370 f9a43d66e650c1de1d12a80f88b6bc1e 320 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 8 320 2.4E-142 T 29-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS19370 f9a43d66e650c1de1d12a80f88b6bc1e 320 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 98 114 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS25485 ab63c59ec87316a9228c3a58230f25f5 68 Pfam PF07395 Mig-14 2 64 2.0E-10 T 29-03-2018 IPR009977 Mig-14 CKQ55_RS08980 fae896a95a315c6935356b90c397037d 481 SUPERFAMILY SSF51735 2 256 5.51E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS08980 fae896a95a315c6935356b90c397037d 481 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 456 2.1E-67 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS08980 fae896a95a315c6935356b90c397037d 481 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 1.2E-31 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS08980 fae896a95a315c6935356b90c397037d 481 SUPERFAMILY SSF48179 273 480 3.74E-50 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS08980 fae896a95a315c6935356b90c397037d 481 Gene3D G3DSA:1.10.1040.10 272 481 1.3E-62 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS08980 fae896a95a315c6935356b90c397037d 481 Gene3D G3DSA:3.40.50.720 1 268 4.5E-62 T 29-03-2018 CKQ55_RS02635 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02635 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 29-03-2018 IPR032874 DDE domain CKQ55_RS02635 736c010e8c5c56df94bcdcc42ba1c38c 254 Gene3D G3DSA:3.30.420.10 62 209 2.6E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS03150 1b29206ebcde47c252bb9d4656ea383d 204 SUPERFAMILY SSF50475 2 187 1.57E-49 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS03150 1b29206ebcde47c252bb9d4656ea383d 204 SMART SM00903 21 172 9.2E-14 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS03150 1b29206ebcde47c252bb9d4656ea383d 204 Gene3D G3DSA:2.30.110.10 11 188 2.8E-45 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS03150 1b29206ebcde47c252bb9d4656ea383d 204 Pfam PF01613 Flavin reductase like domain 23 166 3.0E-18 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 291 310 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 480 497 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 261 277 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 391 409 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 162 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 415 433 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 471 7.1E-82 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 391 415 - T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 SUPERFAMILY SSF56235 41 573 3.28E-197 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 Pfam PF01019 Gamma-glutamyltranspeptidase 64 572 1.4E-192 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS14880 ad269e36b98c63570bbfed52315d7e59 580 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 571 6.1E-228 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS21625 04120298be9fb27e404aeaf5fa200557 398 Pfam PF07690 Major Facilitator Superfamily 16 358 1.1E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS21625 04120298be9fb27e404aeaf5fa200557 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 390 2.4E-150 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CKQ55_RS21625 04120298be9fb27e404aeaf5fa200557 398 Gene3D G3DSA:1.20.1250.20 208 398 2.5E-17 T 29-03-2018 CKQ55_RS21625 04120298be9fb27e404aeaf5fa200557 398 SUPERFAMILY SSF103473 10 395 5.36E-68 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS21625 04120298be9fb27e404aeaf5fa200557 398 Gene3D G3DSA:1.20.1250.20 5 200 3.7E-35 T 29-03-2018 CKQ55_RS21625 04120298be9fb27e404aeaf5fa200557 398 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 2.6E-40 T 29-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 CKQ55_RS22375 63533729127457967dbbb3c885ff61b6 393 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 110 276 6.7E-34 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CKQ55_RS22375 63533729127457967dbbb3c885ff61b6 393 Pfam PF17482 Phage tail sheath C-terminal domain 277 379 1.8E-17 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain CKQ55_RS03790 8018e6e16cd173837a6ba82c2ce6d6f9 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 309 4.1E-129 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS03790 8018e6e16cd173837a6ba82c2ce6d6f9 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 3.9E-93 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS03790 8018e6e16cd173837a6ba82c2ce6d6f9 310 SUPERFAMILY SSF50891 173 288 4.93E-12 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS03790 8018e6e16cd173837a6ba82c2ce6d6f9 310 SMART SM00797 23 298 1.2E-140 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 Gene3D G3DSA:1.10.10.10 1 56 2.8E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.9E-10 T 29-03-2018 CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 SUPERFAMILY SSF53613 61 350 1.37E-50 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 SUPERFAMILY SSF46785 1 54 3.21E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 Pfam PF00294 pfkB family carbohydrate kinase 58 348 1.4E-55 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS21725 6770782ac42255f98b019b633b12f185 363 Gene3D G3DSA:3.40.1190.20 57 358 6.0E-48 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS31130 20cce1280dd7d25790e51ad177936089 133 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 1 112 9.4E-48 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CKQ55_RS31130 20cce1280dd7d25790e51ad177936089 133 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 9 111 1.1E-36 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CKQ55_RS25005 ef43932770094326efa194f6f5b1d5bc 352 Gene3D G3DSA:3.40.50.1980 25 183 1.4E-25 T 29-03-2018 CKQ55_RS25005 ef43932770094326efa194f6f5b1d5bc 352 Gene3D G3DSA:3.40.50.1980 192 351 3.2E-43 T 29-03-2018 CKQ55_RS25005 ef43932770094326efa194f6f5b1d5bc 352 SUPERFAMILY SSF53807 27 326 5.1E-57 T 29-03-2018 CKQ55_RS25005 ef43932770094326efa194f6f5b1d5bc 352 Pfam PF01497 Periplasmic binding protein 48 299 6.5E-32 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS13310 b246b9b77c8512f3eda7adced532d2a6 459 Pfam PF02264 LamB porin 82 459 2.8E-78 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS13310 b246b9b77c8512f3eda7adced532d2a6 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 207 9.0E-45 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS13310 b246b9b77c8512f3eda7adced532d2a6 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 357 452 6.0E-4 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS13310 b246b9b77c8512f3eda7adced532d2a6 459 SUPERFAMILY SSF56935 80 459 1.88E-89 T 29-03-2018 CKQ55_RS13310 b246b9b77c8512f3eda7adced532d2a6 459 Gene3D G3DSA:2.40.170.10 80 459 2.7E-78 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.9E-26 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.6E-18 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 SMART SM00663 235 514 1.1E-184 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.0E-77 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Gene3D G3DSA:2.40.40.20 346 488 7.3E-40 T 29-03-2018 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 18.972 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 29-03-2018 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 SUPERFAMILY SSF64484 16 944 0.0 T 29-03-2018 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Gene3D G3DSA:2.40.50.100 1153 1213 4.8E-14 T 29-03-2018 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Gene3D G3DSA:2.40.50.100 907 1021 8.6E-28 T 29-03-2018 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Gene3D G3DSA:2.40.50.100 1022 1126 2.4E-12 T 29-03-2018 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.2E-89 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS11545 b60f72fa221e83f42881702f8fabce86 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 276 1.1E-93 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 276 32.856 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 Gene3D G3DSA:3.10.20.10 40 126 3.2E-22 T 29-03-2018 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 PIRSF PIRSF015626 4 278 5.1E-80 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 Gene3D G3DSA:3.40.140.10 142 278 1.0E-42 T 29-03-2018 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 Pfam PF02634 FdhD/NarQ family 38 275 1.5E-70 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CKQ55_RS12655 02624c3c21f00e8937e6e022297cecf1 278 SUPERFAMILY SSF53927 22 276 7.52E-79 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CKQ55_RS22140 0074ca8c3bda1d788ac345bfa684061b 313 Gene3D G3DSA:1.10.10.60 1 56 1.3E-13 T 29-03-2018 CKQ55_RS22140 0074ca8c3bda1d788ac345bfa684061b 313 Pfam PF04198 Putative sugar-binding domain 59 311 4.6E-72 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CKQ55_RS22140 0074ca8c3bda1d788ac345bfa684061b 313 Gene3D G3DSA:3.40.50.1360 61 311 8.6E-28 T 29-03-2018 CKQ55_RS22140 0074ca8c3bda1d788ac345bfa684061b 313 SUPERFAMILY SSF100950 59 311 4.44E-54 T 29-03-2018 CKQ55_RS31505 f883c8514af4fee35df89d678a720114 440 Pfam PF02447 GntP family permease 1 440 6.8E-146 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS31505 f883c8514af4fee35df89d678a720114 440 PIRSF PIRSF002746 1 440 2.0E-144 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS31505 f883c8514af4fee35df89d678a720114 440 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 435 1.7E-99 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS08920 66bcb0bda0f504816294b4c431658a29 245 SMART SM00382 98 227 3.8E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS08920 66bcb0bda0f504816294b4c431658a29 245 Pfam PF01695 IstB-like ATP binding protein 95 218 1.0E-17 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CKQ55_RS08920 66bcb0bda0f504816294b4c431658a29 245 SUPERFAMILY SSF52540 64 222 2.16E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08920 66bcb0bda0f504816294b4c431658a29 245 PIRSF PIRSF003073 2 245 3.1E-36 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CKQ55_RS08920 66bcb0bda0f504816294b4c431658a29 245 Gene3D G3DSA:3.40.50.300 48 225 1.9E-18 T 29-03-2018 CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 Gene3D G3DSA:3.40.50.720 1 136 5.1E-33 T 29-03-2018 CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 SUPERFAMILY SSF55347 133 291 3.92E-14 T 29-03-2018 CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 SUPERFAMILY SSF51735 3 153 1.4E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 Gene3D G3DSA:3.30.360.10 137 327 5.1E-25 T 29-03-2018 CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 125 4.9E-26 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 2.0E-7 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09950 56dca4308576b496b45ccb72d4163b38 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.14 T 29-03-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.1E-129 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 SUPERFAMILY SSF53067 1 309 5.04E-45 T 29-03-2018 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.5E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.5E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.5E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.5E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.5E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.5E-53 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 Gene3D G3DSA:3.30.420.40 1 145 1.1E-42 T 29-03-2018 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 29-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.0E-136 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 Pfam PF00814 Glycoprotease family 24 307 4.1E-103 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 Gene3D G3DSA:3.30.420.40 146 289 2.9E-18 T 29-03-2018 CKQ55_RS16655 53e4c93b27ba337b39114b7052f0d454 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.266 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CKQ55_RS26620 753d80ca37b05c529c1bd58690203b60 129 SUPERFAMILY SSF54593 2 126 9.85E-12 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS26620 753d80ca37b05c529c1bd58690203b60 129 Gene3D G3DSA:3.10.180.10 2 128 3.2E-9 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 6.5E-107 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 Gene3D G3DSA:3.40.50.790 68 149 5.5E-35 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 Gene3D G3DSA:3.30.190.20 150 228 1.5E-21 T 29-03-2018 CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 9.1E-53 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 PIRSF PIRSF002155 1 227 1.7E-77 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.308 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS11570 b1a70fd68cebaed5bb62025442c8bab6 234 SUPERFAMILY SSF56808 6 225 7.98E-83 T 29-03-2018 IPR023674 Ribosomal protein L1-like CKQ55_RS06695 853f5507f5dcfcb8bafb9632167555e2 343 Gene3D G3DSA:3.40.190.10 145 295 3.2E-36 T 29-03-2018 CKQ55_RS06695 853f5507f5dcfcb8bafb9632167555e2 343 Gene3D G3DSA:3.40.190.10 25 144 4.8E-11 T 29-03-2018 CKQ55_RS06695 853f5507f5dcfcb8bafb9632167555e2 343 PIRSF PIRSF002825 1 340 1.4E-72 T 29-03-2018 IPR026045 Ferric binding protein CKQ55_RS06695 853f5507f5dcfcb8bafb9632167555e2 343 Pfam PF13343 Bacterial extracellular solute-binding protein 75 288 1.3E-33 T 29-03-2018 CKQ55_RS06695 853f5507f5dcfcb8bafb9632167555e2 343 SUPERFAMILY SSF53850 25 328 3.11E-72 T 29-03-2018 CKQ55_RS16630 8ff6a3e51d5bb58124d7da1942cd1493 168 SUPERFAMILY SSF52141 2 162 1.6E-45 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS16630 8ff6a3e51d5bb58124d7da1942cd1493 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 46.691 T 29-03-2018 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 CKQ55_RS16630 8ff6a3e51d5bb58124d7da1942cd1493 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 4.0E-24 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS16630 8ff6a3e51d5bb58124d7da1942cd1493 168 SMART SM00986 3 160 7.9E-4 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS16630 8ff6a3e51d5bb58124d7da1942cd1493 168 SMART SM00987 3 160 7.9E-4 T 29-03-2018 CKQ55_RS16630 8ff6a3e51d5bb58124d7da1942cd1493 168 Gene3D G3DSA:3.40.470.10 4 167 4.2E-52 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 SMART SM00922 150 253 2.6E-22 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 Pfam PF13378 Enolase C-terminal domain-like 153 372 5.1E-50 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 SUPERFAMILY SSF51604 113 381 2.75E-63 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 SUPERFAMILY SSF54826 1 127 7.58E-29 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 Gene3D G3DSA:3.20.20.120 130 372 5.6E-53 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 Gene3D G3DSA:3.30.390.10 1 129 6.7E-28 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS22165 390a7143fedabf181a8150a797b624e4 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 125 4.7E-9 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS28940 6d429eec7da4179994e16025f4af450c 586 PIRSF PIRSF028304 1 585 4.4E-160 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS28940 6d429eec7da4179994e16025f4af450c 586 Pfam PF05947 Type VI secretion system, TssF 6 583 1.6E-187 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS28940 6d429eec7da4179994e16025f4af450c 586 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 6.4E-172 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS27685 64a23b87ce04e72eb47682bbcfd55723 329 TIGRFAM TIGR04027 LLM_KPN_01858: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family 4 328 3.9E-163 T 29-03-2018 IPR024003 Putative luciferase-like monooxygenase, KPN01858 CKQ55_RS27685 64a23b87ce04e72eb47682bbcfd55723 329 Pfam PF00296 Luciferase-like monooxygenase 18 288 1.7E-43 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS27685 64a23b87ce04e72eb47682bbcfd55723 329 Gene3D G3DSA:3.20.20.30 10 329 4.1E-63 T 29-03-2018 CKQ55_RS27685 64a23b87ce04e72eb47682bbcfd55723 329 SUPERFAMILY SSF51679 7 329 5.1E-64 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 Gene3D G3DSA:1.10.1040.10 283 488 2.2E-65 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 SUPERFAMILY SSF48179 284 487 3.13E-67 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 25 189 1.2E-51 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 218 464 2.0E-98 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 PRINTS PR00084 Mannitol dehydrogenase signature 180 193 9.6E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 9.6E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 PRINTS PR00084 Mannitol dehydrogenase signature 26 36 9.6E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 9.6E-20 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 SUPERFAMILY SSF51735 9 282 6.3E-94 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS07155 12d551a10a338ef100c80b2519ac6d76 491 Gene3D G3DSA:3.40.50.720 1 282 2.0E-104 T 29-03-2018 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 Gene3D G3DSA:1.10.1790.10 63 166 1.2E-21 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 Pfam PF03123 CAT RNA binding domain 1 51 1.2E-20 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 SUPERFAMILY SSF63520 60 165 5.62E-25 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 SUPERFAMILY SSF50151 1 51 1.44E-15 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 SMART SM01061 1 59 2.4E-20 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 SUPERFAMILY SSF63520 173 273 5.1E-23 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 Pfam PF00874 PRD domain 181 273 1.7E-14 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 Pfam PF00874 PRD domain 77 161 1.6E-18 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 Gene3D G3DSA:1.10.1790.10 169 276 1.0E-18 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS05085 86e6a88309fd2e0e8406985905902683 279 Gene3D G3DSA:2.30.24.10 1 62 5.2E-20 T 29-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 CKQ55_RS18810 c1b7bfaf4d7796bc09b59276032947fc 822 SUPERFAMILY SSF141729 28 145 8.5E-28 T 29-03-2018 CKQ55_RS18810 c1b7bfaf4d7796bc09b59276032947fc 822 Pfam PF00577 Outer membrane usher protein 189 738 2.6E-165 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS18810 c1b7bfaf4d7796bc09b59276032947fc 822 Pfam PF13954 PapC N-terminal domain 30 170 9.0E-37 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS18810 c1b7bfaf4d7796bc09b59276032947fc 822 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 300 310 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS18810 c1b7bfaf4d7796bc09b59276032947fc 822 Pfam PF13953 PapC C-terminal domain 750 805 1.0E-9 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS23515 f1086b3d24b068509e78b9184aa20ed8 222 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 3.7E-33 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS23515 f1086b3d24b068509e78b9184aa20ed8 222 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 1.8E-44 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS23515 f1086b3d24b068509e78b9184aa20ed8 222 SUPERFAMILY SSF101327 14 182 3.79E-24 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CKQ55_RS23515 f1086b3d24b068509e78b9184aa20ed8 222 Pfam PF02810 SEC-C motif 203 220 3.9E-11 T 29-03-2018 IPR004027 SEC-C motif CKQ55_RS23515 f1086b3d24b068509e78b9184aa20ed8 222 SUPERFAMILY SSF103642 200 220 3.76E-8 T 29-03-2018 CKQ55_RS23515 f1086b3d24b068509e78b9184aa20ed8 222 Gene3D G3DSA:3.10.450.50 18 222 1.2E-16 T 29-03-2018 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 SUPERFAMILY SSF52540 5 256 6.18E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 Gene3D G3DSA:3.40.50.300 2 267 3.0E-68 T 29-03-2018 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 Gene3D G3DSA:3.40.50.300 273 528 3.2E-67 T 29-03-2018 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 Pfam PF00005 ABC transporter 303 454 5.1E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 Pfam PF00005 ABC transporter 26 184 4.7E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.52 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 5.6E-4 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 SMART SM00382 311 502 1.9E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 SMART SM00382 34 234 1.2E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS21635 8e9d020b16689f5d9972f0e6914d72eb 529 SUPERFAMILY SSF52540 275 525 9.38E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12600 a9e4800bbfdd5532f22112878d49187b 104 Gene3D G3DSA:3.40.50.2300 1 98 2.4E-17 T 29-03-2018 CKQ55_RS12600 a9e4800bbfdd5532f22112878d49187b 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 77 1.3E-8 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS12600 a9e4800bbfdd5532f22112878d49187b 104 SUPERFAMILY SSF52794 1 94 1.36E-16 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS16160 ec84d9710f1070ec49b36169e3179706 94 SUPERFAMILY SSF82771 3 71 2.35E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS16160 ec84d9710f1070ec49b36169e3179706 94 Pfam PF01541 GIY-YIG catalytic domain 2 74 1.4E-13 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS16160 ec84d9710f1070ec49b36169e3179706 94 Gene3D G3DSA:3.40.1440.10 2 82 9.4E-5 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CKQ55_RS26470 4d9a6ceaf65480bec93a7a09d50fa8df 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 3.9E-26 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS26470 4d9a6ceaf65480bec93a7a09d50fa8df 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 2.1E-27 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS26470 4d9a6ceaf65480bec93a7a09d50fa8df 156 SUPERFAMILY SSF51197 1 154 6.04E-30 T 29-03-2018 CKQ55_RS26470 4d9a6ceaf65480bec93a7a09d50fa8df 156 Gene3D G3DSA:2.60.120.370 1 154 1.8E-34 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 SMART SM00529 56 154 1.7E-36 T 29-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 148 1.9E-13 T 29-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 SUPERFAMILY SSF46785 49 117 2.81E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 SUPERFAMILY SSF47979 95 148 5.49E-14 T 29-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 Gene3D G3DSA:1.10.60.10 103 149 1.2E-20 T 29-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 Gene3D G3DSA:1.10.10.10 25 102 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03090 4ae3f849218a040d28e649d0fc412e21 157 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 91 4.5E-9 T 29-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 CKQ55_RS15505 71cc0716f975c280590832e47b6b596f 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.639 T 29-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CKQ55_RS15505 71cc0716f975c280590832e47b6b596f 190 SUPERFAMILY SSF55821 5 187 6.1E-55 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS15505 71cc0716f975c280590832e47b6b596f 190 Gene3D G3DSA:3.90.870.10 1 188 2.8E-53 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CKQ55_RS15505 71cc0716f975c280590832e47b6b596f 190 Pfam PF01300 Telomere recombination 16 190 4.0E-44 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CKQ55_RS21180 6c999e049ee81730985a3a0fd7a904cb 183 SUPERFAMILY SSF56349 2 183 1.0E-44 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS21180 6c999e049ee81730985a3a0fd7a904cb 183 Pfam PF00589 Phage integrase family 7 176 1.7E-42 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS21180 6c999e049ee81730985a3a0fd7a904cb 183 Gene3D G3DSA:1.10.443.10 6 183 4.6E-38 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS29920 3b1073375bc359eb26b43c0b0afb2259 385 SUPERFAMILY SSF53756 59 361 2.2E-39 T 29-03-2018 CKQ55_RS29920 3b1073375bc359eb26b43c0b0afb2259 385 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 133 353 5.6E-14 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CKQ55_RS29920 3b1073375bc359eb26b43c0b0afb2259 385 Gene3D G3DSA:3.40.50.2000 222 382 1.3E-20 T 29-03-2018 CKQ55_RS29920 3b1073375bc359eb26b43c0b0afb2259 385 Gene3D G3DSA:3.40.50.2000 50 218 5.4E-17 T 29-03-2018 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 Gene3D G3DSA:2.30.130.10 274 366 2.7E-28 T 29-03-2018 IPR002478 PUA domain GO:0003723 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 Pfam PF01472 PUA domain 276 350 1.1E-20 T 29-03-2018 IPR002478 PUA domain GO:0003723 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 SUPERFAMILY SSF88697 276 366 1.38E-22 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 SUPERFAMILY SSF53633 6 256 1.31E-64 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 SMART SM00359 276 359 4.5E-20 T 29-03-2018 IPR002478 PUA domain GO:0003723 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.6E-56 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.6E-56 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.6E-56 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.6E-56 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.6E-56 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 366 3.7E-155 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 Gene3D G3DSA:3.40.1160.10 1 265 6.5E-63 T 29-03-2018 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 PIRSF PIRSF000729 1 367 1.2E-144 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 259 36.034 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CKQ55_RS06900 155303ebd59cc20ecc6daf0000a0520c 367 Pfam PF00696 Amino acid kinase family 6 234 6.4E-44 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS19100 c48bbef709ff0c8aea0d528fc8f29957 307 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 38 53 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19100 c48bbef709ff0c8aea0d528fc8f29957 307 Pfam PF00146 NADH dehydrogenase 6 301 2.6E-46 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19100 c48bbef709ff0c8aea0d528fc8f29957 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS11730 5fdf2ad653d562b02b6c8470468984d3 179 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 18.417 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CKQ55_RS11730 5fdf2ad653d562b02b6c8470468984d3 179 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.1E-30 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CKQ55_RS11730 5fdf2ad653d562b02b6c8470468984d3 179 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.9E-32 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CKQ55_RS11730 5fdf2ad653d562b02b6c8470468984d3 179 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.9E-32 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CKQ55_RS11730 5fdf2ad653d562b02b6c8470468984d3 179 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.9E-32 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 Pfam PF00005 ABC transporter 22 170 7.5E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 SUPERFAMILY SSF52540 1 237 1.5E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 SUPERFAMILY SSF55021 249 331 2.4E-5 T 29-03-2018 CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 Gene3D G3DSA:3.40.50.300 1 246 1.6E-72 T 29-03-2018 CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 Gene3D G3DSA:3.30.70.260 247 331 2.4E-11 T 29-03-2018 CKQ55_RS29250 b631912009c2fd07480d470440032bc4 339 SMART SM00382 31 219 3.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19245 06249adcd3be3c046e930bedaeb9940b 165 Gene3D G3DSA:3.90.950.20 1 165 2.0E-60 T 29-03-2018 CKQ55_RS19245 06249adcd3be3c046e930bedaeb9940b 165 Pfam PF02464 Competence-damaged protein 8 160 8.0E-60 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS19245 06249adcd3be3c046e930bedaeb9940b 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 6.0E-61 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS19245 06249adcd3be3c046e930bedaeb9940b 165 SUPERFAMILY SSF142433 3 161 1.19E-57 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.456 T 29-03-2018 IPR023017 Transport protein YbjL, putative CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 SUPERFAMILY SSF116726 227 282 2.88E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Pfam PF06826 Predicted Permease Membrane Region 17 181 7.7E-40 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Pfam PF06826 Predicted Permease Membrane Region 385 554 3.0E-42 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 SUPERFAMILY SSF116726 291 374 3.4E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Gene3D G3DSA:3.30.70.1450 215 291 1.8E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Pfam PF02080 TrkA-C domain 227 281 6.0E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Pfam PF02080 TrkA-C domain 305 371 1.8E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 6.3E-38 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 5.6E-45 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS02445 411e7eb27fd27b2bd058e39512e9641d 561 Gene3D G3DSA:3.30.70.1450 295 375 5.5E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS08960 bfa4c1728981064da97252f2069c7bb3 156 Pfam PF03830 PTS system sorbose subfamily IIB component 2 149 1.1E-48 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS08960 bfa4c1728981064da97252f2069c7bb3 156 Gene3D G3DSA:3.40.35.10 1 156 5.2E-50 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS08960 bfa4c1728981064da97252f2069c7bb3 156 SUPERFAMILY SSF52728 1 153 6.28E-47 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS18720 9fca6d23e52c7bf58ea3a0366ceaaf48 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 29-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CKQ55_RS18720 9fca6d23e52c7bf58ea3a0366ceaaf48 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 7.8E-78 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CKQ55_RS18720 9fca6d23e52c7bf58ea3a0366ceaaf48 236 SUPERFAMILY SSF53448 8 227 9.1E-61 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS18720 9fca6d23e52c7bf58ea3a0366ceaaf48 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 6.1E-89 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CKQ55_RS18720 9fca6d23e52c7bf58ea3a0366ceaaf48 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 227 43.601 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CKQ55_RS18720 9fca6d23e52c7bf58ea3a0366ceaaf48 236 Gene3D G3DSA:3.90.550.10 1 236 2.7E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS05795 cdd1032473fc1f2f51a97fb8ebe4f3df 260 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 2.6E-105 T 29-03-2018 IPR005226 UPF0014 family CKQ55_RS05795 cdd1032473fc1f2f51a97fb8ebe4f3df 260 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 2.5E-81 T 29-03-2018 IPR005226 UPF0014 family CKQ55_RS10415 5ff0734cd67623b68e7f94cb6fed9013 228 Gene3D G3DSA:3.40.225.10 1 227 1.5E-59 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS10415 5ff0734cd67623b68e7f94cb6fed9013 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 65.667 T 29-03-2018 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CKQ55_RS10415 5ff0734cd67623b68e7f94cb6fed9013 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 4.8E-47 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS10415 5ff0734cd67623b68e7f94cb6fed9013 228 SUPERFAMILY SSF53639 2 219 3.14E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS10415 5ff0734cd67623b68e7f94cb6fed9013 228 SMART SM01007 6 194 7.2E-67 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS12700 c6d38202d67e68edcda93ae65a07fbb5 286 Pfam PF03631 Virulence factor BrkB 29 274 2.8E-55 T 29-03-2018 IPR017039 Virulence factor BrkB CKQ55_RS12700 c6d38202d67e68edcda93ae65a07fbb5 286 PIRSF PIRSF035875 1 286 8.3E-70 T 29-03-2018 IPR017039 Virulence factor BrkB CKQ55_RS12700 c6d38202d67e68edcda93ae65a07fbb5 286 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 5.1E-101 T 29-03-2018 IPR017039 Virulence factor BrkB CKQ55_RS12700 c6d38202d67e68edcda93ae65a07fbb5 286 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 13 281 23.316 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CKQ55_RS27025 d47534ad13648d8197155c5aeb2c4a9d 665 Gene3D G3DSA:2.170.130.10 25 166 3.3E-32 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27025 d47534ad13648d8197155c5aeb2c4a9d 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 159 3.6E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27025 d47534ad13648d8197155c5aeb2c4a9d 665 Gene3D G3DSA:2.40.170.20 178 665 1.5E-67 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27025 d47534ad13648d8197155c5aeb2c4a9d 665 SUPERFAMILY SSF56935 33 665 3.66E-111 T 29-03-2018 CKQ55_RS27025 d47534ad13648d8197155c5aeb2c4a9d 665 Pfam PF00593 TonB dependent receptor 187 663 2.0E-58 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS21520 c8ef39c7dbab3630555fc8510e444527 634 SMART SM00257 311 355 9.4E-17 T 29-03-2018 IPR018392 LysM domain CKQ55_RS21520 c8ef39c7dbab3630555fc8510e444527 634 Gene3D G3DSA:3.10.350.10 304 373 3.2E-15 T 29-03-2018 CKQ55_RS21520 c8ef39c7dbab3630555fc8510e444527 634 Pfam PF01476 LysM domain 312 355 1.2E-14 T 29-03-2018 IPR018392 LysM domain CKQ55_RS21520 c8ef39c7dbab3630555fc8510e444527 634 Gene3D G3DSA:1.10.530.10 47 219 0.0045 T 29-03-2018 CKQ55_RS21520 c8ef39c7dbab3630555fc8510e444527 634 SUPERFAMILY SSF54106 310 355 1.57E-11 T 29-03-2018 IPR018392 LysM domain CKQ55_RS28180 159980f6718e3372c89dee7b6999f529 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 3.0E-19 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 SMART SM00359 7 92 2.2E-19 T 29-03-2018 IPR002478 PUA domain GO:0003723 CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 SUPERFAMILY SSF53335 83 396 2.67E-72 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 186 375 6.4E-29 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 SUPERFAMILY SSF88697 7 76 3.6E-18 T 29-03-2018 IPR015947 PUA-like domain CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 Gene3D G3DSA:3.30.750.80 78 184 7.7E-34 T 29-03-2018 CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 Gene3D G3DSA:3.40.50.150 186 399 6.5E-38 T 29-03-2018 CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 5 400 69.227 T 29-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CKQ55_RS01820 001c372e7e7089340f29b9e7adf3d432 400 Gene3D G3DSA:2.30.130.10 8 76 1.8E-27 T 29-03-2018 IPR002478 PUA domain GO:0003723 CKQ55_RS20875 16b5e1393771237edca1ad6aad8fbd5e 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 1.4E-96 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CKQ55_RS20875 16b5e1393771237edca1ad6aad8fbd5e 274 PIRSF PIRSF018455 1 274 3.5E-120 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CKQ55_RS20875 16b5e1393771237edca1ad6aad8fbd5e 274 SUPERFAMILY SSF55166 21 272 5.57E-103 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CKQ55_RS20875 16b5e1393771237edca1ad6aad8fbd5e 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 65.828 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CKQ55_RS20875 16b5e1393771237edca1ad6aad8fbd5e 274 Gene3D G3DSA:3.30.1380.10 20 274 3.1E-99 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CKQ55_RS27675 5d96862404fee4ca80d9207f77a4f304 283 Gene3D G3DSA:1.10.3720.10 8 277 6.0E-43 T 29-03-2018 CKQ55_RS27675 5d96862404fee4ca80d9207f77a4f304 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 276 7.1E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27675 5d96862404fee4ca80d9207f77a4f304 283 SUPERFAMILY SSF161098 79 268 1.44E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS11970 e63d37ea934aa538e39bfabe5267e1c9 224 Gene3D G3DSA:3.40.630.30 86 224 8.9E-13 T 29-03-2018 CKQ55_RS11970 e63d37ea934aa538e39bfabe5267e1c9 224 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 224 43.612 T 29-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CKQ55_RS11970 e63d37ea934aa538e39bfabe5267e1c9 224 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 224 6.0E-83 T 29-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CKQ55_RS11970 e63d37ea934aa538e39bfabe5267e1c9 224 SUPERFAMILY SSF55729 42 208 7.04E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 SUPERFAMILY SSF118215 6 403 1.03E-105 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 Pfam PF00375 Sodium:dicarboxylate symporter family 6 402 3.7E-102 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 Gene3D G3DSA:1.10.3860.10 1 408 1.1E-106 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS03660 b4b0a333cce47f95f8481d22db3c37a5 435 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 4.8E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS26475 b971d1519ebeb9dd75736f248510cdec 390 Gene3D G3DSA:2.120.10.10 12 390 1.6E-60 T 29-03-2018 CKQ55_RS26475 b971d1519ebeb9dd75736f248510cdec 390 SUPERFAMILY SSF50939 28 269 1.35E-58 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CKQ55_RS26475 b971d1519ebeb9dd75736f248510cdec 390 SUPERFAMILY SSF50939 304 386 1.35E-58 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CKQ55_RS26475 b971d1519ebeb9dd75736f248510cdec 390 Pfam PF13088 BNR repeat-like domain 43 366 3.7E-69 T 29-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 CKQ55_RS15195 496b1a461ec15d7b3342c6519cb0b40c 289 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 267 1.5E-10 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CKQ55_RS15195 496b1a461ec15d7b3342c6519cb0b40c 289 Gene3D G3DSA:3.40.50.2020 15 132 2.2E-12 T 29-03-2018 CKQ55_RS15195 496b1a461ec15d7b3342c6519cb0b40c 289 Gene3D G3DSA:3.40.50.2020 133 287 3.7E-25 T 29-03-2018 CKQ55_RS15195 496b1a461ec15d7b3342c6519cb0b40c 289 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 52 281 1.8E-39 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CKQ55_RS15195 496b1a461ec15d7b3342c6519cb0b40c 289 SUPERFAMILY SSF53271 75 265 2.44E-26 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS20200 16047d152ca46dd59bbe9d21caec9f0a 325 SUPERFAMILY SSF47413 14 80 1.23E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS20200 16047d152ca46dd59bbe9d21caec9f0a 325 Pfam PF13413 Helix-turn-helix domain 18 78 6.1E-15 T 29-03-2018 CKQ55_RS20200 16047d152ca46dd59bbe9d21caec9f0a 325 Gene3D G3DSA:1.10.260.40 1 90 3.8E-14 T 29-03-2018 CKQ55_RS20200 16047d152ca46dd59bbe9d21caec9f0a 325 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 320 43.611 T 29-03-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 CKQ55_RS20200 16047d152ca46dd59bbe9d21caec9f0a 325 SMART SM00530 18 79 9.0E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS20200 16047d152ca46dd59bbe9d21caec9f0a 325 Pfam PF13464 Domain of unknown function (DUF4115) 243 317 2.1E-23 T 29-03-2018 IPR025194 Domain of unknown function DUF4115 CKQ55_RS24005 ad5f97859885e8d8e8facac830b8b825 429 SUPERFAMILY SSF53850 24 423 5.2E-78 T 29-03-2018 CKQ55_RS24005 ad5f97859885e8d8e8facac830b8b825 429 Pfam PF01547 Bacterial extracellular solute-binding protein 39 332 1.4E-35 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CKQ55_RS24005 ad5f97859885e8d8e8facac830b8b825 429 Gene3D G3DSA:3.40.190.10 134 427 4.8E-48 T 29-03-2018 CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 SUPERFAMILY SSF46565 131 271 6.8E-31 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 Gene3D G3DSA:1.10.287.110 172 273 2.5E-14 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 275 38.632 T 29-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 PRINTS PR00625 DnaJ domain signature 254 274 2.1E-6 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 PRINTS PR00625 DnaJ domain signature 212 230 2.1E-6 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 PRINTS PR00625 DnaJ domain signature 230 245 2.1E-6 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 SMART SM00271 209 274 1.7E-15 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 Pfam PF00226 DnaJ domain 213 271 1.5E-9 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 Gene3D G3DSA:1.10.3680.10 41 171 1.3E-25 T 29-03-2018 IPR029024 TerB-like CKQ55_RS08355 51d7ebd1804677cc667a855e16ca14cf 275 Pfam PF05099 Tellurite resistance protein TerB 45 170 1.8E-10 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CKQ55_RS17680 dfb5a5b608397ffb857817522ec6670d 445 SUPERFAMILY SSF103473 15 427 3.79E-79 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17680 dfb5a5b608397ffb857817522ec6670d 445 Gene3D G3DSA:1.20.1250.20 237 443 5.9E-22 T 29-03-2018 CKQ55_RS17680 dfb5a5b608397ffb857817522ec6670d 445 Gene3D G3DSA:1.20.1250.20 13 222 3.2E-34 T 29-03-2018 CKQ55_RS17680 dfb5a5b608397ffb857817522ec6670d 445 Pfam PF07690 Major Facilitator Superfamily 29 392 9.4E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS16145 cfc4fc344c9a1b65fe2d15def1c4692e 331 SUPERFAMILY SSF51391 11 162 3.4E-6 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS16145 cfc4fc344c9a1b65fe2d15def1c4692e 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS16145 cfc4fc344c9a1b65fe2d15def1c4692e 331 Pfam PF01136 Peptidase family U32 76 330 6.5E-67 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS16145 cfc4fc344c9a1b65fe2d15def1c4692e 331 Gene3D G3DSA:3.20.20.150 9 329 9.8E-19 T 29-03-2018 CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 Gene3D G3DSA:3.40.50.720 2 115 4.7E-30 T 29-03-2018 CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 SUPERFAMILY SSF51735 102 298 6.64E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 328 2.5E-35 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 3.2E-53 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 SUPERFAMILY SSF52283 2 135 1.32E-45 T 29-03-2018 CKQ55_RS28605 88ce3d58292362ed0d001062da69a9e6 329 Gene3D G3DSA:3.40.50.720 116 300 1.3E-51 T 29-03-2018 CKQ55_RS05755 0e16ab87a654b22fc847ba0f63025641 359 Gene3D G3DSA:3.40.250.10 2 140 1.5E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS05755 0e16ab87a654b22fc847ba0f63025641 359 SUPERFAMILY SSF52821 92 154 1.92E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS05755 0e16ab87a654b22fc847ba0f63025641 359 SUPERFAMILY SSF52821 8 64 1.92E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS05755 0e16ab87a654b22fc847ba0f63025641 359 SMART SM00450 2 132 5.5E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS05755 0e16ab87a654b22fc847ba0f63025641 359 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 359 46.631 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CKQ55_RS05755 0e16ab87a654b22fc847ba0f63025641 359 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 344 8.4E-99 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 Gene3D G3DSA:3.40.50.1360 72 236 5.6E-41 T 29-03-2018 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 SMART SM01134 72 233 1.0E-72 T 29-03-2018 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 1.4E-55 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 SUPERFAMILY SSF100950 73 234 6.09E-31 T 29-03-2018 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.2E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.2E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.6E-23 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 SMART SM00420 6 58 1.1E-24 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 Gene3D G3DSA:1.10.10.10 1 61 2.9E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS14970 b6b9c38b6abb9c8aaea19f18e2047b1a 252 SUPERFAMILY SSF46785 3 77 2.12E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 1.6E-36 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 SUPERFAMILY SSF51735 4 167 7.19E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 Gene3D G3DSA:3.40.50.720 2 169 5.2E-29 T 29-03-2018 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.1E-74 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 Gene3D G3DSA:3.90.110.10 171 448 7.6E-72 T 29-03-2018 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 SUPERFAMILY SSF56327 173 442 4.89E-78 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS29640 0a56f1ea0df810272a746e7736a2d508 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.2E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS08765 ad20b5eb58e341d5414953107eb412a3 213 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 1.0E-65 T 29-03-2018 IPR019305 Uncharacterised protein family Smp CKQ55_RS08765 ad20b5eb58e341d5414953107eb412a3 213 Gene3D G3DSA:3.30.450.20 30 158 1.1E-6 T 29-03-2018 CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 SUPERFAMILY SSF52540 4 170 4.0E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 Pfam PF02421 Ferrous iron transport protein B 6 163 4.1E-64 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 Gene3D G3DSA:3.40.50.300 2 288 1.0E-34 T 29-03-2018 CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 Pfam PF07670 Nucleoside recognition 512 689 4.6E-37 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 Pfam PF07670 Nucleoside recognition 353 443 6.2E-13 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 1.3E-21 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CKQ55_RS14415 71eecfffdc48a10e53ea0f1d1442eea0 772 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 2.4E-244 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CKQ55_RS01130 b5fd85a6505f5396e95673f8cac8ac29 198 Pfam PF03358 NADPH-dependent FMN reductase 13 142 9.4E-13 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CKQ55_RS01130 b5fd85a6505f5396e95673f8cac8ac29 198 Gene3D G3DSA:3.40.50.360 2 198 3.1E-51 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS01130 b5fd85a6505f5396e95673f8cac8ac29 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 40.994 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CKQ55_RS01130 b5fd85a6505f5396e95673f8cac8ac29 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 6.7E-102 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CKQ55_RS01130 b5fd85a6505f5396e95673f8cac8ac29 198 SUPERFAMILY SSF52218 1 197 3.01E-63 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS27195 6cc0b11a471df96951d0a66fc0f70dea 271 Gene3D G3DSA:3.90.1200.10 100 271 3.1E-23 T 29-03-2018 CKQ55_RS27195 6cc0b11a471df96951d0a66fc0f70dea 271 PIRSF PIRSF000706 6 271 8.7E-98 T 29-03-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 CKQ55_RS27195 6cc0b11a471df96951d0a66fc0f70dea 271 Pfam PF01636 Phosphotransferase enzyme family 88 254 2.2E-27 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CKQ55_RS27195 6cc0b11a471df96951d0a66fc0f70dea 271 SUPERFAMILY SSF56112 17 270 3.35E-51 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS27195 6cc0b11a471df96951d0a66fc0f70dea 271 Gene3D G3DSA:3.30.200.20 1 99 1.8E-22 T 29-03-2018 CKQ55_RS25540 d1347d17cdf2fc7c54c6d89a8da7ee4e 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 6.2E-10 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat CKQ55_RS25540 d1347d17cdf2fc7c54c6d89a8da7ee4e 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 4.3E-10 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 3.0E-43 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 SMART SM01219 1 106 1.7E-56 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.016 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 Gene3D G3DSA:3.30.920.10 1 106 4.9E-34 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 Pfam PF01491 Frataxin-like domain 1 102 1.2E-29 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 29-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS11890 69dab236e021239ee148efbecabcd835 106 SUPERFAMILY SSF55387 1 105 5.76E-40 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 3.1E-28 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 Gene3D G3DSA:3.40.50.720 144 327 1.9E-33 T 29-03-2018 CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 SUPERFAMILY SSF50129 1 169 9.89E-46 T 29-03-2018 IPR011032 GroES-like CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 Gene3D G3DSA:3.90.180.10 1 143 6.5E-44 T 29-03-2018 CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 2.9E-28 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 SUPERFAMILY SSF51735 135 302 5.22E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27655 be7ab311be50c0f201cf43b4057fc334 336 SMART SM00829 7 332 1.8E-7 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS25170 918f7603bf770f30a50994f43de4dc90 163 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 8.9E-50 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS25170 918f7603bf770f30a50994f43de4dc90 163 PIRSF PIRSF028301 1 163 4.7E-52 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS25170 918f7603bf770f30a50994f43de4dc90 163 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 4.4E-53 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS29005 918f7603bf770f30a50994f43de4dc90 163 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 8.9E-50 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS29005 918f7603bf770f30a50994f43de4dc90 163 PIRSF PIRSF028301 1 163 4.7E-52 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS29005 918f7603bf770f30a50994f43de4dc90 163 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 4.4E-53 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.7E-173 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 Gene3D G3DSA:3.40.1380.20 328 480 7.4E-41 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-50 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 SUPERFAMILY SSF51621 171 344 2.23E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 SUPERFAMILY SSF51621 4 79 2.23E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 Gene3D G3DSA:3.20.20.60 6 174 2.1E-34 T 29-03-2018 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 Gene3D G3DSA:3.20.20.60 175 327 9.4E-53 T 29-03-2018 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 SUPERFAMILY SSF50800 74 168 1.53E-24 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 3.8E-28 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 SUPERFAMILY SSF52935 329 479 1.03E-38 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS23735 f2d39cd4472be269c53dbc76dadcaa13 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 2.4E-130 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CKQ55_RS03360 ff7d7b58e5e7c72fd5e5e83e0955af3b 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 8.7E-39 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CKQ55_RS03360 ff7d7b58e5e7c72fd5e5e83e0955af3b 158 SUPERFAMILY SSF49777 1 157 5.63E-53 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CKQ55_RS03360 ff7d7b58e5e7c72fd5e5e83e0955af3b 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 2.5E-55 T 29-03-2018 IPR005247 YbhB/YbcL CKQ55_RS03360 ff7d7b58e5e7c72fd5e5e83e0955af3b 158 Gene3D G3DSA:3.90.280.10 1 158 1.5E-51 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CKQ55_RS16185 9fbbb0c1889aa526e48caf0a44f8a69f 191 SMART SM00749 129 191 6.2E-7 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CKQ55_RS16185 9fbbb0c1889aa526e48caf0a44f8a69f 191 SMART SM00749 51 114 1.4E-11 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CKQ55_RS16185 9fbbb0c1889aa526e48caf0a44f8a69f 191 Pfam PF04972 BON domain 124 189 3.3E-16 T 29-03-2018 IPR007055 BON domain CKQ55_RS16185 9fbbb0c1889aa526e48caf0a44f8a69f 191 Pfam PF04972 BON domain 46 113 2.7E-13 T 29-03-2018 IPR007055 BON domain CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 Gene3D G3DSA:3.90.1150.10 10 182 2.0E-39 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 419 3.0E-204 T 29-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 SUPERFAMILY SSF53383 23 420 8.11E-136 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 PIRSF PIRSF000521 125 421 3.5E-47 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 PIRSF PIRSF000521 2 129 2.1E-6 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 Gene3D G3DSA:3.90.1150.10 306 421 3.9E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 Gene3D G3DSA:3.40.640.10 183 305 6.5E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS14775 8e46c375508d1337f498dfb42146cd87 421 Pfam PF00202 Aminotransferase class-III 21 419 4.4E-133 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS17645 2e010d1376a09cad8de7fb246b67fb3f 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS17645 2e010d1376a09cad8de7fb246b67fb3f 422 Pfam PF07690 Major Facilitator Superfamily 26 355 1.2E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS17645 2e010d1376a09cad8de7fb246b67fb3f 422 Gene3D G3DSA:1.20.1250.20 3 197 4.5E-28 T 29-03-2018 CKQ55_RS17645 2e010d1376a09cad8de7fb246b67fb3f 422 Gene3D G3DSA:1.20.1250.20 208 412 3.9E-11 T 29-03-2018 CKQ55_RS17645 2e010d1376a09cad8de7fb246b67fb3f 422 SUPERFAMILY SSF103473 19 407 6.67E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27215 69f90c1dd92a5208743993e4d50d2019 186 Gene3D G3DSA:3.30.420.10 106 186 1.2E-6 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS13955 9c3a47d65b1a3ac411830dcf66470aa5 439 SUPERFAMILY SSF103473 8 419 9.02E-89 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13955 9c3a47d65b1a3ac411830dcf66470aa5 439 Gene3D G3DSA:1.20.1250.20 10 213 1.3E-38 T 29-03-2018 CKQ55_RS13955 9c3a47d65b1a3ac411830dcf66470aa5 439 Pfam PF07690 Major Facilitator Superfamily 24 385 4.5E-56 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS13955 9c3a47d65b1a3ac411830dcf66470aa5 439 Gene3D G3DSA:1.20.1250.20 228 421 4.0E-27 T 29-03-2018 CKQ55_RS13955 9c3a47d65b1a3ac411830dcf66470aa5 439 PIRSF PIRSF002808 2 426 2.6E-35 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 Gene3D G3DSA:3.40.50.1370 177 376 1.6E-35 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 372 1.6E-40 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 4.6E-25 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.7E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.7E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 3.7E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 1.3E-202 T 29-03-2018 IPR017702 Putative carbamoyltransferase YgeW CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 Gene3D G3DSA:3.40.50.1370 7 176 7.9E-34 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 SUPERFAMILY SSF53671 19 373 3.8E-57 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 3.6E-7 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 3.6E-7 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS24350 a950460118349b15b0c64ec786117345 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 3.6E-7 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 Pfam PF03466 LysR substrate binding domain 91 295 4.3E-38 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 SUPERFAMILY SSF53850 93 299 1.09E-40 T 29-03-2018 CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 Gene3D G3DSA:1.10.10.10 6 90 6.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 SUPERFAMILY SSF46785 7 115 7.39E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 Gene3D G3DSA:3.40.190.10 92 177 4.7E-13 T 29-03-2018 CKQ55_RS01190 0c543bd8110b6a7bfa1ffbdd9f702a1f 308 Gene3D G3DSA:3.40.190.10 178 268 1.4E-25 T 29-03-2018 CKQ55_RS00630 35ea84fb4bee6ecaeadefa342709c027 276 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 42 272 59.028 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CKQ55_RS00630 35ea84fb4bee6ecaeadefa342709c027 276 SUPERFAMILY SSF52467 42 271 1.71E-73 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS00630 35ea84fb4bee6ecaeadefa342709c027 276 Pfam PF02146 Sir2 family 49 222 3.1E-50 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 CKQ55_RS00630 35ea84fb4bee6ecaeadefa342709c027 276 Gene3D G3DSA:3.40.50.1220 38 275 3.0E-53 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS22460 29b1e949fa867302b8b450bc37c0fc12 230 SUPERFAMILY SSF161098 7 205 7.72E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22460 29b1e949fa867302b8b450bc37c0fc12 230 Gene3D G3DSA:1.10.3720.10 1 225 8.8E-36 T 29-03-2018 CKQ55_RS22460 29b1e949fa867302b8b450bc37c0fc12 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 114 1.2E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS22460 29b1e949fa867302b8b450bc37c0fc12 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 3.5E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14595 656ca8c59892484d60514db214b6b222 112 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 112 29.878 T 29-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CKQ55_RS14595 656ca8c59892484d60514db214b6b222 112 Pfam PF00892 EamA-like transporter family 7 108 2.7E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS14595 656ca8c59892484d60514db214b6b222 112 SUPERFAMILY SSF103481 6 108 2.22E-15 T 29-03-2018 CKQ55_RS25535 16f65333e4fe13a81f127b7d35009253 165 Pfam PF05974 Domain of unknown function (DUF892) 6 162 4.8E-55 T 29-03-2018 IPR010287 Domain of unknown function DUF892 CKQ55_RS25535 16f65333e4fe13a81f127b7d35009253 165 Gene3D G3DSA:1.20.1260.10 1 165 3.6E-28 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS25535 16f65333e4fe13a81f127b7d35009253 165 SUPERFAMILY SSF47240 1 154 3.42E-51 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS22680 2914a7e11b30c608fda5e4c06498a4b2 184 SUPERFAMILY SSF51182 1 181 1.07E-80 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS22680 2914a7e11b30c608fda5e4c06498a4b2 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 180 6.3E-83 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CKQ55_RS22680 2914a7e11b30c608fda5e4c06498a4b2 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 178 2.0E-76 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CKQ55_RS22680 2914a7e11b30c608fda5e4c06498a4b2 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 183 5.0E-98 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CKQ55_RS22680 2914a7e11b30c608fda5e4c06498a4b2 184 Gene3D G3DSA:2.60.120.10 1 184 1.5E-78 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS10290 5e2c039d84e205b71ce901cd002ddaf8 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 7.1E-68 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS10290 5e2c039d84e205b71ce901cd002ddaf8 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 39.247 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS10290 5e2c039d84e205b71ce901cd002ddaf8 212 SUPERFAMILY SSF55068 5 208 1.31E-85 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS10290 5e2c039d84e205b71ce901cd002ddaf8 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 6.4E-71 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS10290 5e2c039d84e205b71ce901cd002ddaf8 212 Gene3D G3DSA:3.30.1060.10 29 209 5.0E-80 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 Gene3D G3DSA:1.10.10.10 1 86 1.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 SUPERFAMILY SSF46785 4 89 1.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 Gene3D G3DSA:3.40.190.10 91 181 2.7E-12 T 29-03-2018 CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 Pfam PF03466 LysR substrate binding domain 90 297 1.1E-37 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.0E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 SUPERFAMILY SSF53850 91 298 3.08E-37 T 29-03-2018 CKQ55_RS27540 43773844157a3596b53a0192ee111e0a 299 Gene3D G3DSA:3.40.190.10 182 266 8.8E-18 T 29-03-2018 CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 Gene3D G3DSA:3.40.50.970 4 207 5.3E-67 T 29-03-2018 CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 Gene3D G3DSA:3.40.50.920 208 338 2.3E-35 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 SUPERFAMILY SSF52518 2 217 8.34E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 SUPERFAMILY SSF52922 202 337 4.58E-39 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 7.8E-58 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 Pfam PF02780 Transketolase, C-terminal domain 207 329 1.4E-38 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS27290 76ecad6405c3bfb149b2e1bc7fddca8b 339 SMART SM00861 4 193 9.2E-63 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 Gene3D G3DSA:3.40.366.10 157 277 1.3E-19 T 29-03-2018 CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 Pfam PF00698 Acyl transferase domain 5 275 1.2E-23 T 29-03-2018 IPR014043 Acyl transferase CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 PIRSF PIRSF000446 1 293 7.9E-55 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 288 1.0E-15 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 286 2.9E-95 T 29-03-2018 IPR017554 Malonate decarboxylase, McdH subunit CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 SUPERFAMILY SSF52151 184 279 1.12E-47 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 SUPERFAMILY SSF52151 2 119 1.12E-47 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 SUPERFAMILY SSF55048 120 175 7.72E-11 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CKQ55_RS26055 09bc058e750718755d65c03d353d7025 300 Gene3D G3DSA:3.40.366.10 1 156 3.9E-31 T 29-03-2018 CKQ55_RS23620 1b4cc4460756287af22c3b77a73ab6d1 189 SUPERFAMILY SSF54593 2 185 3.21E-67 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS23620 1b4cc4460756287af22c3b77a73ab6d1 189 Gene3D G3DSA:3.10.180.10 7 186 3.0E-75 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS23620 1b4cc4460756287af22c3b77a73ab6d1 189 Pfam PF06185 YecM protein 10 185 1.2E-68 T 29-03-2018 IPR010393 Protein of unknown function DUF991 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 PRINTS PR00990 Ribokinase signature 5 26 5.4E-17 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 PRINTS PR00990 Ribokinase signature 103 116 5.4E-17 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 PRINTS PR00990 Ribokinase signature 171 186 5.4E-17 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 PRINTS PR00990 Ribokinase signature 32 51 5.4E-17 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 PRINTS PR00990 Ribokinase signature 197 208 5.4E-17 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 SUPERFAMILY SSF53613 1 284 6.7E-58 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 Hamap MF_01987 Ribokinase [rbsK]. 1 283 18.514 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 Pfam PF00294 pfkB family carbohydrate kinase 24 274 1.9E-36 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS27070 b8f86958b1e0f5744d3f3f2af0df3477 290 Gene3D G3DSA:3.40.1190.20 1 290 3.5E-65 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS26190 1cce769117fb733a444d4396bac7be9d 83 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 78 3.0E-25 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 CKQ55_RS26190 1cce769117fb733a444d4396bac7be9d 83 Pfam PF06649 Protein of unknown function (DUF1161) 25 78 2.4E-21 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 Gene3D G3DSA:2.140.10.10 649 797 6.6E-11 T 29-03-2018 CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 Gene3D G3DSA:2.140.10.10 159 640 1.9E-84 T 29-03-2018 CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 Pfam PF13360 PQQ-like domain 215 393 2.8E-9 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 Pfam PF13360 PQQ-like domain 677 767 7.3E-9 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SUPERFAMILY SSF50998 564 791 1.7E-134 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SUPERFAMILY SSF50998 166 527 1.7E-134 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 Pfam PF01011 PQQ enzyme repeat 444 473 1.7E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SMART SM00564 722 755 8.5E-6 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SMART SM00564 414 463 29.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SMART SM00564 345 385 120.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SMART SM00564 485 518 170.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SMART SM00564 287 319 220.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 SMART SM00564 222 253 0.081 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CKQ55_RS25410 67f7f04a582788b6dba358601588e365 801 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 20 800 2.3E-271 T 29-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CKQ55_RS01460 0d6c5a8059eb5c58a2342557d4b48897 295 Pfam PF14305 TupA-like ATPgrasp 51 294 6.3E-44 T 29-03-2018 IPR029465 TupA-like ATPgrasp protein CKQ55_RS01460 0d6c5a8059eb5c58a2342557d4b48897 295 Gene3D G3DSA:3.30.470.20 146 292 1.2E-4 T 29-03-2018 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 SUPERFAMILY SSF53383 97 460 1.07E-78 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 Gene3D G3DSA:3.40.640.10 120 367 9.6E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 SMART SM00345 31 90 1.8E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 Gene3D G3DSA:1.10.10.10 15 92 8.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 3.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 SUPERFAMILY SSF46785 21 98 4.36E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 Gene3D G3DSA:3.90.1150.10 368 462 6.2E-15 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 2.1E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 2.1E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS06075 9cfce55b98539592469ef3c30807fd7c 475 Pfam PF00155 Aminotransferase class I and II 139 452 9.5E-26 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 13 208 8.0E-116 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 190 200 - T 29-03-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 SMART SM01059 6 209 2.7E-121 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 Pfam PF00302 Chloramphenicol acetyltransferase 8 209 1.1E-101 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 PIRSF PIRSF000440 5 217 1.1E-88 T 29-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 Gene3D G3DSA:3.30.559.10 1 217 3.5E-41 T 29-03-2018 CKQ55_RS02535 b5389ad5cee01935e8a893847dffe830 219 SUPERFAMILY SSF52777 7 215 6.99E-80 T 29-03-2018 CKQ55_RS25310 1545255f2f18148139e50175d22179cc 181 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 170 4.4E-36 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CKQ55_RS25310 1545255f2f18148139e50175d22179cc 181 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 14 159 1.9E-22 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 Gene3D G3DSA:3.90.190.20 300 434 6.9E-35 T 29-03-2018 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 SUPERFAMILY SSF51984 3 94 9.68E-23 T 29-03-2018 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 Gene3D G3DSA:3.40.1190.10 95 299 9.6E-61 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 372 1.1E-8 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 Pfam PF08245 Mur ligase middle domain 110 280 4.5E-27 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.962 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 SUPERFAMILY SSF53244 299 437 6.87E-51 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 Gene3D G3DSA:3.40.50.720 1 94 1.1E-13 T 29-03-2018 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 7.1E-128 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08145 bacc39130461cb387d57161ea301e669 438 SUPERFAMILY SSF53623 95 297 5.89E-56 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS12505 59912dbc95eec75747e6d6ec6edb808d 231 Pfam PF15977 Winged helix-turn-helix DNA binding 161 228 1.8E-27 T 29-03-2018 CKQ55_RS21800 004d301bb08b7e7ab4af8a111379254c 238 Pfam PF02698 DUF218 domain 48 181 7.9E-18 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CKQ55_RS21800 004d301bb08b7e7ab4af8a111379254c 238 PIRSF PIRSF005011 1 238 1.0E-152 T 29-03-2018 IPR023604 Uncharacterised protein family SanA CKQ55_RS21800 004d301bb08b7e7ab4af8a111379254c 238 Gene3D G3DSA:3.40.50.620 38 174 6.5E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS20605 9bb916675088a27911d49aa3a8d14e64 135 Pfam PF14534 Domain of unknown function (DUF4440) 9 118 4.7E-10 T 29-03-2018 IPR027843 Domain of unknown function DUF4440 CKQ55_RS20605 9bb916675088a27911d49aa3a8d14e64 135 SUPERFAMILY SSF54427 7 129 3.39E-26 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS20605 9bb916675088a27911d49aa3a8d14e64 135 Gene3D G3DSA:3.10.450.50 6 132 1.1E-16 T 29-03-2018 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 SUPERFAMILY SSF53041 3 146 7.19E-36 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 Gene3D G3DSA:3.40.50.1390 1 115 2.1E-27 T 29-03-2018 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 Gene3D G3DSA:1.20.5.40 116 135 6.3E-16 T 29-03-2018 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 Pfam PF00239 Resolvase, N terminal domain 5 146 2.7E-35 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 SMART SM00857 4 146 2.7E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 ProSitePatterns PS00398 Site-specific recombinases signature 2. 64 76 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CKQ55_RS22060 36569c146d3f6e1fc4ad5ee940e5a38b 192 Gene3D G3DSA:1.10.10.60 136 186 7.5E-8 T 29-03-2018 CKQ55_RS18470 19a06922a1866f1e91b233f2ac6103fe 436 SUPERFAMILY SSF103473 19 429 3.53E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18470 19a06922a1866f1e91b233f2ac6103fe 436 Gene3D G3DSA:1.20.1250.20 14 242 5.0E-24 T 29-03-2018 CKQ55_RS18470 19a06922a1866f1e91b233f2ac6103fe 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 22 430 3.1E-199 T 29-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CKQ55_RS18470 19a06922a1866f1e91b233f2ac6103fe 436 Pfam PF07690 Major Facilitator Superfamily 31 387 1.6E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS18470 19a06922a1866f1e91b233f2ac6103fe 436 Gene3D G3DSA:1.20.1250.20 243 436 3.8E-21 T 29-03-2018 CKQ55_RS10970 7abc1818bb7c0fea1ff64903db1832e6 862 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 320 330 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS10970 7abc1818bb7c0fea1ff64903db1832e6 862 Pfam PF13953 PapC C-terminal domain 777 846 2.3E-20 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS10970 7abc1818bb7c0fea1ff64903db1832e6 862 SUPERFAMILY SSF141729 74 184 1.31E-25 T 29-03-2018 CKQ55_RS10970 7abc1818bb7c0fea1ff64903db1832e6 862 Pfam PF00577 Outer membrane usher protein 210 767 4.6E-170 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS10970 7abc1818bb7c0fea1ff64903db1832e6 862 Pfam PF13954 PapC N-terminal domain 48 193 4.2E-39 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS07845 ec532632aa58aeca77d8473c48046976 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 41.739 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CKQ55_RS07845 ec532632aa58aeca77d8473c48046976 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 2.9E-103 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CKQ55_RS07845 ec532632aa58aeca77d8473c48046976 263 SUPERFAMILY SSF51621 4 262 3.98E-103 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS07845 ec532632aa58aeca77d8473c48046976 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 3.9E-124 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CKQ55_RS07845 ec532632aa58aeca77d8473c48046976 263 PIRSF PIRSF000388 1 263 3.0E-97 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CKQ55_RS07845 ec532632aa58aeca77d8473c48046976 263 Gene3D G3DSA:3.20.20.60 1 262 9.5E-84 T 29-03-2018 CKQ55_RS27920 4151bb7aa9599167e1d5b8b2ec4409df 99 Gene3D G3DSA:3.30.70.860 15 96 1.0E-24 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CKQ55_RS27920 4151bb7aa9599167e1d5b8b2ec4409df 99 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 2.6E-27 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CKQ55_RS27920 4151bb7aa9599167e1d5b8b2ec4409df 99 Pfam PF04175 Protein of unknown function (DUF406) 5 96 5.5E-28 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CKQ55_RS24105 8fc848c2506d36b4acba2380e9b4d348 517 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 517 360.006 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CKQ55_RS24105 8fc848c2506d36b4acba2380e9b4d348 517 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 2 511 1.2E-284 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CKQ55_RS24105 8fc848c2506d36b4acba2380e9b4d348 517 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 2 512 1.7E-286 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CKQ55_RS24105 8fc848c2506d36b4acba2380e9b4d348 517 PRINTS PR00173 Glutamate-aspartate symporter signature 143 163 4.6E-5 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS24105 8fc848c2506d36b4acba2380e9b4d348 517 PRINTS PR00173 Glutamate-aspartate symporter signature 481 501 4.6E-5 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS24105 8fc848c2506d36b4acba2380e9b4d348 517 PRINTS PR00173 Glutamate-aspartate symporter signature 363 382 4.6E-5 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS24115 933ec666cf7d3b9fc47948720e152f82 510 Pfam PF04293 SpoVR like protein 19 450 1.2E-176 T 29-03-2018 IPR007390 Sporulation stage V, protein R CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Gene3D G3DSA:3.40.50.300 101 165 2.9E-8 T 29-03-2018 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 SMART SM00382 99 247 3.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.9E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 SUPERFAMILY SSF47446 329 431 5.89E-39 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.4E-180 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 SMART SM00962 100 296 5.7E-119 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Gene3D G3DSA:1.20.120.140 196 310 1.0E-32 T 29-03-2018 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.8E-75 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Pfam PF02978 Signal peptide binding domain 329 427 6.5E-33 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.716 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Gene3D G3DSA:1.10.260.30 328 433 1.5E-38 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 SUPERFAMILY SSF52540 42 354 3.19E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 SMART SM00963 1 86 6.5E-37 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CKQ55_RS19730 1bd1dc67367bcaa5cdfeb21e21a1c888 455 Gene3D G3DSA:1.20.120.140 1 91 5.6E-30 T 29-03-2018 CKQ55_RS16405 1687fdc81fafe433a9918791f4fa7205 329 Gene3D G3DSA:3.40.50.720 1 146 2.1E-37 T 29-03-2018 CKQ55_RS16405 1687fdc81fafe433a9918791f4fa7205 329 SUPERFAMILY SSF55347 127 291 1.32E-23 T 29-03-2018 CKQ55_RS16405 1687fdc81fafe433a9918791f4fa7205 329 Gene3D G3DSA:3.30.360.10 147 325 1.7E-28 T 29-03-2018 CKQ55_RS16405 1687fdc81fafe433a9918791f4fa7205 329 SUPERFAMILY SSF51735 2 152 2.06E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS16405 1687fdc81fafe433a9918791f4fa7205 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.6E-27 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS00750 f6f873338dda0af770168091bdf95b44 213 SUPERFAMILY SSF52540 1 208 4.08E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00750 f6f873338dda0af770168091bdf95b44 213 Gene3D G3DSA:3.40.50.300 1 212 1.1E-48 T 29-03-2018 CKQ55_RS00750 f6f873338dda0af770168091bdf95b44 213 Pfam PF02223 Thymidylate kinase 8 200 3.1E-58 T 29-03-2018 CKQ55_RS00750 f6f873338dda0af770168091bdf95b44 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 9.8E-67 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CKQ55_RS00750 f6f873338dda0af770168091bdf95b44 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 29-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CKQ55_RS00750 f6f873338dda0af770168091bdf95b44 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.4 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CKQ55_RS18375 acb4909b6c9e900929d97284de0ad2a9 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 1.0E-86 T 29-03-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 CKQ55_RS18375 acb4909b6c9e900929d97284de0ad2a9 271 Pfam PF00005 ABC transporter 17 165 6.3E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS18375 acb4909b6c9e900929d97284de0ad2a9 271 SMART SM00382 26 213 5.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18375 acb4909b6c9e900929d97284de0ad2a9 271 SUPERFAMILY SSF52540 3 235 4.69E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18375 acb4909b6c9e900929d97284de0ad2a9 271 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS18375 acb4909b6c9e900929d97284de0ad2a9 271 Gene3D G3DSA:3.40.50.300 1 238 2.4E-60 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.5E-29 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.5E-29 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.5E-29 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.5E-29 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 1.5E-29 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 SUPERFAMILY SSF54373 175 275 3.45E-42 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 Gene3D G3DSA:3.30.9.10 314 388 1.8E-13 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 Gene3D G3DSA:3.30.9.10 169 282 1.4E-45 T 29-03-2018 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 SUPERFAMILY SSF51905 1 172 3.56E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 SUPERFAMILY SSF51905 274 364 3.56E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 1.6E-193 T 29-03-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 Pfam PF01494 FAD binding domain 2 342 9.0E-81 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS08900 13846053b94cd3c1affa687e88c7f020 394 Gene3D G3DSA:3.50.50.60 3 168 3.6E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14740 d8a6fbdf48ae3fc6e672614e7d3a67bc 92 Pfam PF06611 Protein of unknown function (DUF1145) 1 57 1.6E-26 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 CKQ55_RS05315 34cc2f49715045d75ca55db5ba390444 59 Pfam PF13973 Domain of unknown function (DUF4222) 7 58 1.0E-23 T 29-03-2018 IPR025317 Protein of unknown function DUF4222 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 SMART SM00866 94 233 7.0E-28 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 SMART SM00345 14 73 2.3E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 2.0E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 Gene3D G3DSA:1.10.10.10 1 72 8.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 Pfam PF07702 UTRA domain 94 232 2.0E-32 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 5.1E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 5.1E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 Gene3D G3DSA:3.40.1410.10 73 239 1.0E-30 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 9 239 2.8E-115 T 29-03-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 SUPERFAMILY SSF46785 1 77 4.24E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13285 cd2870ac29ba996ca4470fe556b1462b 239 SUPERFAMILY SSF64288 61 237 3.93E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 687 35.346 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 Gene3D G3DSA:3.40.50.2300 531 680 2.9E-16 T 29-03-2018 CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 Gene3D G3DSA:3.40.50.2300 257 522 1.8E-39 T 29-03-2018 CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 Pfam PF04348 LppC putative lipoprotein 40 286 4.3E-44 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 Pfam PF04348 LppC putative lipoprotein 376 687 7.1E-83 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 Gene3D G3DSA:3.40.50.2300 154 256 0.23 T 29-03-2018 CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 SUPERFAMILY SSF53822 549 690 8.24E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 SUPERFAMILY SSF53822 259 287 8.24E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS16200 1ebd7a0e29cf5c37b23fab66e28b99f5 693 SUPERFAMILY SSF53822 379 509 8.24E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Pfam PF13247 4Fe-4S dicluster domain 53 144 9.7E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 178 640 1.0E-234 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.50.50.60 474 645 7.9E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 SUPERFAMILY SSF54862 186 280 2.93E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 SUPERFAMILY SSF54862 1 159 2.93E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.50.50.60 408 473 7.9E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 318 629 2.5E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.30.70.20 22 59 4.0E-8 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 PRINTS PR00419 Adrenodoxin reductase family signature 318 340 2.2E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 PRINTS PR00419 Adrenodoxin reductase family signature 460 474 2.2E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 PRINTS PR00419 Adrenodoxin reductase family signature 494 507 2.2E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 PRINTS PR00419 Adrenodoxin reductase family signature 383 393 2.2E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 PRINTS PR00419 Adrenodoxin reductase family signature 341 354 2.2E-36 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.30.70.20 90 145 7.7E-13 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 SUPERFAMILY SSF51971 316 571 7.06E-64 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.30.70.20 1 21 0.0094 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.30.70.20 60 89 6.5E-10 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 194 304 8.0E-36 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:3.40.50.720 315 407 7.2E-17 T 29-03-2018 CKQ55_RS24300 f23b482a3804cbf1ac68cc90a761a90c 646 Gene3D G3DSA:1.10.1060.10 167 314 2.4E-34 T 29-03-2018 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 73.029 T 29-03-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 SUPERFAMILY SSF51905 313 370 2.37E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 SUPERFAMILY SSF51905 2 216 2.37E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 Gene3D G3DSA:3.30.9.10 211 312 1.9E-6 T 29-03-2018 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 Gene3D G3DSA:3.30.9.10 73 210 1.3E-24 T 29-03-2018 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 Gene3D G3DSA:3.40.50.720 3 72 0.0015 T 29-03-2018 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 SUPERFAMILY SSF54373 212 312 2.75E-18 T 29-03-2018 CKQ55_RS00890 b964febd7a3cfbae34a2dbcd40fa9755 372 Pfam PF01266 FAD dependent oxidoreductase 4 350 1.4E-45 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 Pfam PF02378 Phosphotransferase system, EIIC 108 388 1.8E-30 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 617 7.9E-212 T 29-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 474 596 1.1E-45 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 537 549 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 Pfam PF00367 phosphotransferase system, EIIB 9 41 1.6E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 475 595 4.0E-41 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 SUPERFAMILY SSF55604 6 79 3.01E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 Gene3D G3DSA:3.30.1360.60 2 76 7.0E-28 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 SUPERFAMILY SSF51261 469 618 2.62E-50 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS05095 8ec5913320bf5256505db33bca1074f7 626 Gene3D G3DSA:2.70.70.10 463 620 4.5E-54 T 29-03-2018 CKQ55_RS07915 8f482d58499b43af049812c41effa643 220 SMART SM00947 30 192 2.6E-69 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS07915 8f482d58499b43af049812c41effa643 220 Pfam PF00484 Carbonic anhydrase 38 187 8.7E-51 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS07915 8f482d58499b43af049812c41effa643 220 Gene3D G3DSA:3.40.1050.10 1 220 1.3E-73 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS07915 8f482d58499b43af049812c41effa643 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS07915 8f482d58499b43af049812c41effa643 220 SUPERFAMILY SSF53056 1 213 5.89E-74 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS07915 8f482d58499b43af049812c41effa643 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CKQ55_RS18490 fa49292a798a33dfebc6678c2bf6fda9 390 SUPERFAMILY SSF51679 9 355 4.84E-98 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS18490 fa49292a798a33dfebc6678c2bf6fda9 390 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 10 386 68.25 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CKQ55_RS18490 fa49292a798a33dfebc6678c2bf6fda9 390 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 10 355 4.8E-185 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CKQ55_RS18490 fa49292a798a33dfebc6678c2bf6fda9 390 Gene3D G3DSA:3.20.20.30 8 367 5.7E-93 T 29-03-2018 CKQ55_RS18490 fa49292a798a33dfebc6678c2bf6fda9 390 Pfam PF00296 Luciferase-like monooxygenase 10 331 2.7E-88 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS16635 9690e1fa42e301c4668f817b16a17d88 220 Gene3D G3DSA:1.10.10.60 8 65 4.4E-16 T 29-03-2018 CKQ55_RS16635 9690e1fa42e301c4668f817b16a17d88 220 SUPERFAMILY SSF46689 5 87 2.55E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16635 9690e1fa42e301c4668f817b16a17d88 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.0E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS16635 9690e1fa42e301c4668f817b16a17d88 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.0E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS16635 9690e1fa42e301c4668f817b16a17d88 220 Gene3D G3DSA:1.10.357.10 66 213 2.5E-10 T 29-03-2018 CKQ55_RS16635 9690e1fa42e301c4668f817b16a17d88 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.9E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS12630 01f45fc7868d9f247e47e4c75a9d3698 267 Pfam PF03609 PTS system sorbose-specific iic component 3 234 1.1E-65 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS14510 75bc493306085c60640bfb02a43592ce 110 Gene3D G3DSA:1.10.10.10 1 94 1.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14510 75bc493306085c60640bfb02a43592ce 110 SUPERFAMILY SSF46785 1 87 1.42E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14510 75bc493306085c60640bfb02a43592ce 110 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23815 6b4847471f75c23aff68b62ea0b5e23e 254 Gene3D G3DSA:2.60.40.10 24 151 1.0E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS23815 6b4847471f75c23aff68b62ea0b5e23e 254 SUPERFAMILY SSF49354 20 149 3.14E-22 T 29-03-2018 IPR008962 PapD-like CKQ55_RS23815 6b4847471f75c23aff68b62ea0b5e23e 254 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 145 2.3E-17 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS19010 c17f02d25ec978aacd553a49020242b8 304 Gene3D G3DSA:3.30.420.40 117 300 1.1E-51 T 29-03-2018 CKQ55_RS19010 c17f02d25ec978aacd553a49020242b8 304 ProSitePatterns PS01125 ROK family signature. 131 158 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS19010 c17f02d25ec978aacd553a49020242b8 304 Gene3D G3DSA:3.30.420.40 1 116 1.3E-22 T 29-03-2018 CKQ55_RS19010 c17f02d25ec978aacd553a49020242b8 304 SUPERFAMILY SSF53067 1 295 1.3E-59 T 29-03-2018 CKQ55_RS19010 c17f02d25ec978aacd553a49020242b8 304 Pfam PF00480 ROK family 4 293 1.8E-71 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS25785 fff6abbba688b65c09d48c128203c427 77 Gene3D G3DSA:3.30.110.40 5 77 9.8E-22 T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS25785 fff6abbba688b65c09d48c128203c427 77 SUPERFAMILY SSF64307 2 77 5.36E-24 T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS25785 fff6abbba688b65c09d48c128203c427 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS25785 fff6abbba688b65c09d48c128203c427 77 Pfam PF01206 Sulfurtransferase TusA 9 77 3.2E-19 T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 Pfam PF02501 Type II secretion system (T2SS), protein I 40 118 2.7E-24 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 Gene3D G3DSA:3.30.1300.30 33 119 9.6E-25 T 29-03-2018 CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 104 8.1E-25 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.9E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 1.3E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS07775 7914c380ca296ee572a2d0e509457829 121 SUPERFAMILY SSF54523 37 118 8.24E-24 T 29-03-2018 CKQ55_RS27760 f4693f78ce3f7f3872fd5533fe9fc0af 231 Gene3D G3DSA:1.10.3480.10 18 219 5.2E-33 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS27760 f4693f78ce3f7f3872fd5533fe9fc0af 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 4.5E-35 T 29-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CKQ55_RS27760 f4693f78ce3f7f3872fd5533fe9fc0af 231 Pfam PF02613 Nitrate reductase delta subunit 29 151 1.8E-12 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS27760 f4693f78ce3f7f3872fd5533fe9fc0af 231 SUPERFAMILY SSF89155 2 155 2.22E-28 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS21610 fa69059a68b700846f200ab8801fb998 94 Gene3D G3DSA:2.40.240.10 1 94 7.7E-32 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS21610 fa69059a68b700846f200ab8801fb998 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 1.0E-39 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CKQ55_RS21610 fa69059a68b700846f200ab8801fb998 94 Pfam PF01386 Ribosomal L25p family 4 91 2.3E-25 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CKQ55_RS21610 fa69059a68b700846f200ab8801fb998 94 SUPERFAMILY SSF50715 1 93 2.09E-31 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS21610 fa69059a68b700846f200ab8801fb998 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.53 T 29-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 Gene3D G3DSA:1.10.10.10 1 84 3.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 Pfam PF03466 LysR substrate binding domain 86 286 6.3E-50 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 SUPERFAMILY SSF46785 2 109 3.65E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 Gene3D G3DSA:3.40.190.10 177 261 5.0E-19 T 29-03-2018 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 SUPERFAMILY SSF53850 87 285 4.34E-47 T 29-03-2018 CKQ55_RS21740 b5ef8f7e29e251f9a2a560d456326a26 288 Gene3D G3DSA:3.40.190.10 88 176 2.1E-24 T 29-03-2018 CKQ55_RS10885 05f4038993ccddd73d70fa490350f018 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 146 3.0E-60 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS10885 05f4038993ccddd73d70fa490350f018 149 Gene3D G3DSA:3.40.1400.10 1 148 1.4E-63 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS10885 05f4038993ccddd73d70fa490350f018 149 SUPERFAMILY SSF89623 2 145 3.66E-57 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS10885 05f4038993ccddd73d70fa490350f018 149 PIRSF PIRSF005384 2 148 4.5E-59 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS10885 05f4038993ccddd73d70fa490350f018 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 145 1.4E-68 T 29-03-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CKQ55_RS10885 05f4038993ccddd73d70fa490350f018 149 Pfam PF02502 Ribose/Galactose Isomerase 4 141 8.7E-55 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 Pfam PF16990 Carbohydrate binding module (family 35) 610 730 2.3E-38 T 29-03-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 Gene3D G3DSA:2.60.120.260 608 730 3.1E-15 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 SUPERFAMILY SSF49785 627 727 3.83E-6 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 Gene3D G3DSA:2.60.40.10 398 506 8.6E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 Gene3D G3DSA:3.20.20.80 28 378 1.7E-28 T 29-03-2018 CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 SUPERFAMILY SSF49265 400 496 2.95E-6 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 SUPERFAMILY SSF51445 32 356 3.84E-39 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS19040 0eb278de5aaf5cabd27e06c6962b7b57 731 Gene3D G3DSA:2.60.40.10 507 593 1.8E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS15325 173fb2cdaacd3678a7968e3a88b6734e 100 Pfam PF00276 Ribosomal protein L23 9 95 5.9E-31 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15325 173fb2cdaacd3678a7968e3a88b6734e 100 SUPERFAMILY SSF54189 6 97 2.84E-30 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15325 173fb2cdaacd3678a7968e3a88b6734e 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 29-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15325 173fb2cdaacd3678a7968e3a88b6734e 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15325 173fb2cdaacd3678a7968e3a88b6734e 100 Gene3D G3DSA:3.30.70.330 6 100 2.0E-30 T 29-03-2018 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.2E-7 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 156.661 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.6E-161 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 SMART SM00729 84 293 4.0E-15 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 Pfam PF04055 Radical SAM superfamily 91 251 2.0E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 SUPERFAMILY SSF102114 53 316 8.24E-67 T 29-03-2018 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 PIRSF PIRSF005963 2 321 1.4E-131 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CKQ55_RS04175 6c110aeb2c2f62db7d34ce75df04ddb2 321 Gene3D G3DSA:3.20.20.70 28 302 1.2E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08560 23acf4914357f2ef601404ea102294e4 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.083 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS08560 23acf4914357f2ef601404ea102294e4 87 Pfam PF01649 Ribosomal protein S20 2 84 5.9E-27 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS08560 23acf4914357f2ef601404ea102294e4 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 8.8E-34 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS08560 23acf4914357f2ef601404ea102294e4 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS08560 23acf4914357f2ef601404ea102294e4 87 Gene3D G3DSA:1.20.58.110 1 87 1.0E-28 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS08560 23acf4914357f2ef601404ea102294e4 87 SUPERFAMILY SSF46992 3 86 5.62E-31 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS10660 a953e7b08308ff18c96a7dc23790f19f 188 SMART SM00862 28 105 1.3E-11 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS10660 a953e7b08308ff18c96a7dc23790f19f 188 Gene3D G3DSA:1.10.10.10 6 111 3.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10660 a953e7b08308ff18c96a7dc23790f19f 188 SUPERFAMILY SSF46894 27 105 3.97E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS10660 a953e7b08308ff18c96a7dc23790f19f 188 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 105 7.1E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 Gene3D G3DSA:1.10.10.10 35 111 7.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 Pfam PF09339 IclR helix-turn-helix domain 53 102 2.7E-12 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 SUPERFAMILY SSF46785 51 121 4.35E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 SMART SM00346 50 140 6.7E-28 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 SUPERFAMILY SSF55781 122 298 1.94E-26 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 Pfam PF01614 Bacterial transcriptional regulator 173 295 1.0E-14 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS25010 49c6db8f399418582a96482feae48bd3 306 Gene3D G3DSA:3.30.450.40 122 304 1.0E-29 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 SUPERFAMILY SSF53720 6 481 9.03E-177 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 Gene3D G3DSA:3.40.605.10 7 273 3.9E-108 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 4.3E-239 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 Gene3D G3DSA:3.40.309.10 274 448 1.4E-72 T 29-03-2018 CKQ55_RS07180 2b7cc779869355d2aef4bbdf5082f02f 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 6.2E-176 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS01395 2dcee22ddfe382df60eccb1e7d910cba 503 SUPERFAMILY SSF161098 262 495 9.16E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01395 2dcee22ddfe382df60eccb1e7d910cba 503 SUPERFAMILY SSF161098 3 226 1.83E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01395 2dcee22ddfe382df60eccb1e7d910cba 503 Gene3D G3DSA:1.10.3720.10 35 235 9.0E-27 T 29-03-2018 CKQ55_RS01395 2dcee22ddfe382df60eccb1e7d910cba 503 Gene3D G3DSA:1.10.3720.10 291 501 3.9E-23 T 29-03-2018 CKQ55_RS01395 2dcee22ddfe382df60eccb1e7d910cba 503 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 224 3.5E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01395 2dcee22ddfe382df60eccb1e7d910cba 503 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 326 500 1.5E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20725 6e52f8075bafdfcd287f6532ef49d6d6 117 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 116 2.0E-41 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 CKQ55_RS20725 6e52f8075bafdfcd287f6532ef49d6d6 117 Gene3D G3DSA:1.10.10.10 3 65 2.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20725 6e52f8075bafdfcd287f6532ef49d6d6 117 SUPERFAMILY SSF46955 2 52 1.37E-13 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS20725 6e52f8075bafdfcd287f6532ef49d6d6 117 Pfam PF07037 Putative transcription regulator (DUF1323) 6 116 6.3E-49 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 Gene3D G3DSA:3.30.420.40 210 402 1.5E-47 T 29-03-2018 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 SUPERFAMILY SSF53067 87 394 1.57E-55 T 29-03-2018 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 Pfam PF01047 MarR family 25 63 1.0E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 Pfam PF00480 ROK family 89 392 3.0E-94 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 Gene3D G3DSA:3.30.420.40 73 209 2.2E-19 T 29-03-2018 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 Gene3D G3DSA:1.10.10.10 13 72 1.9E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03985 9c3c6c12f8b455509b5e242ded106d69 406 SUPERFAMILY SSF46785 14 78 2.63E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 417 2.7E-51 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 Gene3D G3DSA:3.90.1820.10 278 442 4.9E-44 T 29-03-2018 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 Gene3D G3DSA:3.90.1820.10 1 277 1.4E-61 T 29-03-2018 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 SUPERFAMILY SSF51735 5 165 1.47E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 3.3E-53 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 SUPERFAMILY SSF56327 169 441 7.4E-84 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 170 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CKQ55_RS23025 f2bfadcb08ca3a1e7170882f5119b1f0 442 Pfam PF02056 Family 4 glycosyl hydrolase 7 185 2.6E-59 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 29-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Gene3D G3DSA:3.40.120.10 12 213 7.2E-45 T 29-03-2018 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Gene3D G3DSA:3.40.120.10 214 331 2.4E-21 T 29-03-2018 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 1.0E-35 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 538 1.6E-7 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 SUPERFAMILY SSF53738 209 317 6.24E-9 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 SUPERFAMILY SSF53738 305 446 1.06E-32 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 SUPERFAMILY SSF53738 26 235 6.36E-49 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.1E-21 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 SUPERFAMILY SSF55957 432 544 1.27E-19 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Gene3D G3DSA:3.30.310.50 443 546 3.6E-20 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 1.4E-30 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CKQ55_RS03895 a3c8dcc23122af568f17149faaf417fc 546 Gene3D G3DSA:3.40.120.10 332 442 1.2E-27 T 29-03-2018 CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.3E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 Gene3D G3DSA:1.10.10.10 3 76 2.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 Gene3D G3DSA:1.20.120.530 93 238 5.4E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 SUPERFAMILY SSF48008 96 220 6.93E-24 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 SMART SM00345 15 74 2.6E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 SUPERFAMILY SSF46785 6 78 3.11E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.1E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.1E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 Pfam PF07729 FCD domain 103 218 2.0E-20 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS18925 6e95005d4c809bdb4bc91cee57652a63 238 SMART SM00895 100 222 3.4E-12 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 Gene3D G3DSA:3.30.70.100 985 1079 1.2E-11 T 29-03-2018 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 Pfam PF12795 Mechanosensitive ion channel porin domain 31 255 2.2E-54 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 SUPERFAMILY SSF50182 918 983 1.01E-16 T 29-03-2018 IPR010920 LSM domain CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 SUPERFAMILY SSF82689 985 1083 3.01E-16 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 Pfam PF00924 Mechanosensitive ion channel 875 1074 1.3E-52 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 Gene3D G3DSA:1.20.5.110 24 799 2.1E-5 T 29-03-2018 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 Gene3D G3DSA:2.30.30.60 933 982 2.7E-12 T 29-03-2018 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 5.3E-111 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 SUPERFAMILY SSF82861 834 916 2.88E-8 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CKQ55_RS10595 a13e7c34b3df8f7cc44c6d30a45287f8 1108 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 Pfam PF00717 Peptidase S24-like 86 159 2.3E-20 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 159 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 262 304 1.1E-16 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 SUPERFAMILY SSF51306 78 322 1.71E-82 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 Gene3D G3DSA:2.10.109.10 76 320 1.3E-55 T 29-03-2018 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 Pfam PF10502 Signal peptidase, peptidase S26 258 302 4.5E-7 T 29-03-2018 IPR019533 Peptidase S26 CKQ55_RS19945 435a6fb804bc1ef0f5f3dd13b5db0e89 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CKQ55_RS22465 cd984e9914b850c27ccc23f18c85d647 241 Gene3D G3DSA:1.10.3720.10 3 238 2.6E-27 T 29-03-2018 CKQ55_RS22465 cd984e9914b850c27ccc23f18c85d647 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 127 3.4E-13 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS22465 cd984e9914b850c27ccc23f18c85d647 241 SUPERFAMILY SSF161098 22 220 4.45E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22465 cd984e9914b850c27ccc23f18c85d647 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 233 3.3E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS17935 7ebd4c0e67737160197835cf3dc605ad 448 Gene3D G3DSA:1.20.5.1070 18 63 0.002 T 29-03-2018 CKQ55_RS17935 7ebd4c0e67737160197835cf3dc605ad 448 Pfam PF16966 Porin-like glycoporin RafY 84 448 7.8E-191 T 29-03-2018 IPR016963 Glycoporin RafY CKQ55_RS17935 7ebd4c0e67737160197835cf3dc605ad 448 Pfam PF11471 Maltoporin periplasmic N-terminal extension 9 52 6.9E-12 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CKQ55_RS12865 ace9c8e56fc887cbe28612a56f347f61 499 Gene3D G3DSA:1.10.8.300 214 293 5.7E-4 T 29-03-2018 CKQ55_RS12865 ace9c8e56fc887cbe28612a56f347f61 499 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 1.6E-25 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CKQ55_RS12865 ace9c8e56fc887cbe28612a56f347f61 499 SUPERFAMILY SSF52540 22 291 1.38E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12865 ace9c8e56fc887cbe28612a56f347f61 499 Gene3D G3DSA:3.40.50.300 5 213 5.4E-18 T 29-03-2018 CKQ55_RS12865 ace9c8e56fc887cbe28612a56f347f61 499 SMART SM00382 38 187 2.8E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12865 ace9c8e56fc887cbe28612a56f347f61 499 Pfam PF12592 Protein of unknown function (DUF3763) 444 498 1.5E-21 T 29-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 CKQ55_RS24215 da11da5eb59c2d24954534c54a484f1a 299 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 293 7.3E-56 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CKQ55_RS24215 da11da5eb59c2d24954534c54a484f1a 299 Gene3D G3DSA:3.40.190.10 24 175 3.1E-30 T 29-03-2018 CKQ55_RS24215 da11da5eb59c2d24954534c54a484f1a 299 SUPERFAMILY SSF53850 33 295 3.53E-54 T 29-03-2018 CKQ55_RS24215 da11da5eb59c2d24954534c54a484f1a 299 Gene3D G3DSA:3.40.190.10 178 297 1.4E-19 T 29-03-2018 CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 SUPERFAMILY SSF53335 6 365 1.02E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 43.123 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 Gene3D G3DSA:3.40.50.150 155 366 5.5E-36 T 29-03-2018 CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 366 2.4E-193 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CKQ55_RS12165 6421fc970891edf751cc6e8806c63e3c 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 1.9E-189 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 SUPERFAMILY SSF57716 142 191 1.07E-16 T 29-03-2018 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 PIRSF PIRSF035805 1 201 4.7E-57 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 SUPERFAMILY SSF52540 1 141 4.2E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.284 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 Gene3D G3DSA:3.30.60.20 142 193 5.1E-19 T 29-03-2018 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 29-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 Gene3D G3DSA:3.40.50.300 2 141 1.3E-44 T 29-03-2018 CKQ55_RS24610 c063927d81c4b375214614f7dc5d40b4 205 Pfam PF00265 Thymidine kinase 2 186 5.4E-65 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 Gene3D G3DSA:1.10.150.240 22 89 5.3E-32 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 Gene3D G3DSA:3.40.50.1000 90 257 5.3E-22 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 Pfam PF00702 haloacid dehalogenase-like hydrolase 4 195 1.0E-6 T 29-03-2018 CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 3 257 5.6E-113 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 SUPERFAMILY SSF56784 4 259 1.37E-55 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 269 138.613 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CKQ55_RS13275 7321d851d8c153ef7be5f1e853a30889 269 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 50 203 2.2E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS03005 6950d58fd5ebcf16d9973bfc3abc0374 313 SUPERFAMILY SSF56235 4 310 1.83E-97 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS03005 6950d58fd5ebcf16d9973bfc3abc0374 313 Pfam PF01112 Asparaginase 5 311 3.6E-118 T 29-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 CKQ55_RS03005 6950d58fd5ebcf16d9973bfc3abc0374 313 Gene3D G3DSA:3.60.20.30 179 313 1.7E-51 T 29-03-2018 CKQ55_RS05375 378830aced7dc927e83c13b01732c368 257 Pfam PF11041 Protein of unknown function (DUF2612) 4 156 4.7E-37 T 29-03-2018 IPR021283 Protein of unknown function DUF2612 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 Gene3D G3DSA:3.40.190.10 179 268 1.5E-20 T 29-03-2018 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 Gene3D G3DSA:1.10.10.10 2 85 2.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 Gene3D G3DSA:3.40.190.10 89 178 2.4E-20 T 29-03-2018 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 SUPERFAMILY SSF46785 5 112 4.13E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 Pfam PF03466 LysR substrate binding domain 90 290 8.1E-44 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08520 070ac91e2d3a30b8d4e357a80fe6c002 312 SUPERFAMILY SSF53850 88 292 9.72E-43 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Gene3D G3DSA:1.20.5.460 691 713 2.6E-10 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Gene3D G3DSA:2.20.25.90 1 55 8.2E-16 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Pfam PF01568 Molydopterin dinucleotide binding domain 576 683 5.1E-29 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Gene3D G3DSA:3.40.50.740 257 534 3.4E-79 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 7 686 3.1E-272 T 29-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Gene3D G3DSA:3.40.50.740 61 167 5.3E-25 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 SMART SM00926 1 54 6.6E-15 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 1.2E-12 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 435 452 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Gene3D G3DSA:3.40.228.10 168 256 4.1E-26 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 PIRSF PIRSF000144 522 693 0.31 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 PIRSF PIRSF000144 52 439 7.8E-55 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 SUPERFAMILY SSF53706 1 564 2.36E-191 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 616 643 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Gene3D G3DSA:2.40.40.20 535 688 1.2E-39 T 29-03-2018 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 Pfam PF00384 Molybdopterin oxidoreductase 61 488 3.2E-86 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25160 dcf86613270f3cb8e210ebaa6b04e84b 716 SUPERFAMILY SSF50692 566 702 8.59E-43 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS04880 7e387cc910199289e7359270986892a6 266 Pfam PF03609 PTS system sorbose-specific iic component 4 233 1.3E-68 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS04880 7e387cc910199289e7359270986892a6 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 263 2.5E-114 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS24985 5378c2527a1a8d38aa988d697c3d4337 278 SUPERFAMILY SSF53223 1 107 2.01E-21 T 29-03-2018 CKQ55_RS24985 5378c2527a1a8d38aa988d697c3d4337 278 SUPERFAMILY SSF51735 109 252 1.35E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS24985 5378c2527a1a8d38aa988d697c3d4337 278 Gene3D G3DSA:3.40.50.720 120 276 6.3E-27 T 29-03-2018 CKQ55_RS24985 5378c2527a1a8d38aa988d697c3d4337 278 Gene3D G3DSA:3.40.50.10860 1 119 2.2E-25 T 29-03-2018 CKQ55_RS24985 5378c2527a1a8d38aa988d697c3d4337 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 95 1.3E-12 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS24985 5378c2527a1a8d38aa988d697c3d4337 278 Pfam PF00899 ThiF family 125 157 4.6E-6 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS12840 079d6f5d2dc186253c16403e0eba62e4 296 Gene3D G3DSA:3.40.50.2300 141 293 1.4E-44 T 29-03-2018 CKQ55_RS12840 079d6f5d2dc186253c16403e0eba62e4 296 Gene3D G3DSA:3.40.50.2300 25 140 4.3E-27 T 29-03-2018 CKQ55_RS12840 079d6f5d2dc186253c16403e0eba62e4 296 SUPERFAMILY SSF53822 26 295 9.03E-89 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS12840 079d6f5d2dc186253c16403e0eba62e4 296 Pfam PF13407 Periplasmic binding protein domain 29 281 1.8E-58 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS13940 543fd2f4fa45af25281196cf1df4e548 286 SUPERFAMILY SSF51658 12 275 6.55E-57 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS13940 543fd2f4fa45af25281196cf1df4e548 286 Gene3D G3DSA:3.20.20.150 1 285 1.7E-55 T 29-03-2018 CKQ55_RS13940 543fd2f4fa45af25281196cf1df4e548 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 4.8E-154 T 29-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CKQ55_RS13940 543fd2f4fa45af25281196cf1df4e548 286 Pfam PF01261 Xylose isomerase-like TIM barrel 25 234 5.1E-38 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS17120 0b6214d31f8decb675c4f5250164734a 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.735 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CKQ55_RS17120 0b6214d31f8decb675c4f5250164734a 197 SUPERFAMILY SSF52972 1 195 9.68E-75 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS17120 0b6214d31f8decb675c4f5250164734a 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.2E-69 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CKQ55_RS17120 0b6214d31f8decb675c4f5250164734a 197 Gene3D G3DSA:3.90.950.10 1 197 6.1E-81 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS17120 0b6214d31f8decb675c4f5250164734a 197 Pfam PF01725 Ham1 family 4 192 1.1E-57 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CKQ55_RS13600 bf16d01aea4175944eaeb98b13224323 251 Gene3D G3DSA:3.30.428.30 29 249 4.5E-88 T 29-03-2018 CKQ55_RS13600 bf16d01aea4175944eaeb98b13224323 251 PIRSF PIRSF001273 1 251 1.1E-94 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CKQ55_RS13600 bf16d01aea4175944eaeb98b13224323 251 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 31 249 1.3E-89 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CKQ55_RS13600 bf16d01aea4175944eaeb98b13224323 251 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 251 1.1E-127 T 29-03-2018 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CKQ55_RS13600 bf16d01aea4175944eaeb98b13224323 251 SUPERFAMILY SSF54197 31 249 9.52E-87 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS13600 bf16d01aea4175944eaeb98b13224323 251 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 251 47.786 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 2.0E-22 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 191 1.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 SUPERFAMILY SSF56784 7 215 3.28E-48 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 Gene3D G3DSA:3.40.50.1000 1 29 0.13 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 4.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 4.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 4.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 Gene3D G3DSA:1.10.150.240 30 81 4.3E-19 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS29605 192db2f58b2c5f5de130621966be545b 222 Gene3D G3DSA:3.40.50.1000 82 215 7.7E-26 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 Gene3D G3DSA:1.10.40.50 278 346 1.3E-22 T 29-03-2018 CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 SUPERFAMILY SSF52540 114 340 4.61E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 335 2.6E-97 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 Gene3D G3DSA:2.40.50.140 35 102 2.0E-19 T 29-03-2018 CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 Pfam PF03193 RsgA GTPase 100 277 5.0E-55 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 341 37.368 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CKQ55_RS10585 8778ae0ac91db5bc5971c606ceba73f9 353 Gene3D G3DSA:3.40.50.300 115 276 2.0E-23 T 29-03-2018 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.5E-138 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 PIRSF PIRSF001456 3 361 2.4E-142 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.712 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 Gene3D G3DSA:3.60.150.10 3 359 2.9E-160 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 SUPERFAMILY SSF103263 4 352 1.11E-147 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS20870 e7f37545b3c70a174e68d3b7dc77e5fd 362 Pfam PF01264 Chorismate synthase 10 345 4.2E-142 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CKQ55_RS04720 6f287ae2037f33409ad9c3605b77c629 360 SUPERFAMILY SSF111369 44 279 2.75E-51 T 29-03-2018 CKQ55_RS04720 6f287ae2037f33409ad9c3605b77c629 360 Gene3D G3DSA:2.40.50.100 28 84 4.3E-7 T 29-03-2018 CKQ55_RS04720 6f287ae2037f33409ad9c3605b77c629 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 356 2.0E-74 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS04720 6f287ae2037f33409ad9c3605b77c629 360 Gene3D G3DSA:1.20.1600.10 85 284 4.0E-29 T 29-03-2018 CKQ55_RS04720 6f287ae2037f33409ad9c3605b77c629 360 Pfam PF13533 Biotin-lipoyl like 55 102 2.3E-11 T 29-03-2018 CKQ55_RS21095 d0bfba848bb74978c23d5b1342321f05 199 SMART SM00471 26 151 4.6E-7 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS21095 d0bfba848bb74978c23d5b1342321f05 199 SUPERFAMILY SSF109604 3 193 4.0E-45 T 29-03-2018 CKQ55_RS21095 d0bfba848bb74978c23d5b1342321f05 199 Pfam PF13023 HD domain 11 156 4.7E-17 T 29-03-2018 IPR006674 HD domain CKQ55_RS21095 d0bfba848bb74978c23d5b1342321f05 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 6.0E-44 T 29-03-2018 CKQ55_RS21095 d0bfba848bb74978c23d5b1342321f05 199 Gene3D G3DSA:1.10.3210.10 1 199 7.0E-54 T 29-03-2018 CKQ55_RS21095 d0bfba848bb74978c23d5b1342321f05 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.896 T 29-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CKQ55_RS17125 5f7e558c9af2f5953c1a73b64cd24772 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 88 1.1E-30 T 29-03-2018 IPR005228 Conserved hypothetical protein CHP00251 CKQ55_RS17125 5f7e558c9af2f5953c1a73b64cd24772 96 Gene3D G3DSA:3.30.1200.10 1 96 1.1E-30 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CKQ55_RS17125 5f7e558c9af2f5953c1a73b64cd24772 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 3.3E-26 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CKQ55_RS17125 5f7e558c9af2f5953c1a73b64cd24772 96 SMART SM01152 7 83 4.8E-38 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CKQ55_RS17125 5f7e558c9af2f5953c1a73b64cd24772 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.332 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CKQ55_RS17125 5f7e558c9af2f5953c1a73b64cd24772 96 SUPERFAMILY SSF69786 4 92 9.81E-32 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CKQ55_RS31740 b4f3221cda4397f590120eea845f4e5e 338 Pfam PF05598 Transposase domain (DUF772) 63 136 3.8E-21 T 29-03-2018 IPR008490 Transposase InsH, N-terminal CKQ55_RS31740 b4f3221cda4397f590120eea845f4e5e 338 Pfam PF01609 Transposase DDE domain 150 324 1.3E-31 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 7.9E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 SUPERFAMILY SSF46785 20 85 8.51E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 Gene3D G3DSA:1.10.10.10 15 83 3.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 Gene3D G3DSA:3.90.1150.10 388 489 8.5E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 SMART SM00345 23 82 5.5E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 Gene3D G3DSA:3.40.640.10 172 387 8.3E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 Pfam PF00155 Aminotransferase class I and II 169 442 1.9E-18 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS03430 98cf8301babad447faa8563105c77074 489 SUPERFAMILY SSF53383 131 488 5.62E-80 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.818 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 3.0E-150 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 3.8E-178 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 Gene3D G3DSA:3.30.930.10 1 214 2.4E-87 T 29-03-2018 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 Gene3D G3DSA:1.20.58.180 216 294 2.1E-32 T 29-03-2018 CKQ55_RS14050 c1054b865bb00d5474130a7c285abcea 303 SUPERFAMILY SSF55681 8 292 3.05E-134 T 29-03-2018 CKQ55_RS20855 be3aa6a17c3f334e5528e001c6a43beb 161 SUPERFAMILY SSF53254 1 145 6.85E-20 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS20855 be3aa6a17c3f334e5528e001c6a43beb 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 2.9E-7 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS20855 be3aa6a17c3f334e5528e001c6a43beb 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 7.2E-60 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 CKQ55_RS20855 be3aa6a17c3f334e5528e001c6a43beb 161 Gene3D G3DSA:3.40.50.1240 1 161 1.7E-22 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 227 3.0E-7 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 1.2E-27 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 SUPERFAMILY SSF101386 135 236 1.01E-22 T 29-03-2018 CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 Gene3D G3DSA:1.10.287.1080 122 222 1.1E-25 T 29-03-2018 CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 SUPERFAMILY SSF101386 3 105 1.1E-25 T 29-03-2018 CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 3.5E-119 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CKQ55_RS18590 06cb6cef844f33d1928dabd0295479cb 263 Gene3D G3DSA:1.10.287.1080 3 121 2.6E-42 T 29-03-2018 CKQ55_RS00835 b28a2f7f99f9d677dc9d1bb3d8794c09 404 SUPERFAMILY SSF103473 3 388 2.75E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS00835 b28a2f7f99f9d677dc9d1bb3d8794c09 404 Pfam PF07690 Major Facilitator Superfamily 18 330 2.1E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS00835 b28a2f7f99f9d677dc9d1bb3d8794c09 404 Gene3D G3DSA:1.20.1250.20 199 392 9.6E-17 T 29-03-2018 CKQ55_RS00835 b28a2f7f99f9d677dc9d1bb3d8794c09 404 Gene3D G3DSA:1.20.1250.20 4 193 9.1E-16 T 29-03-2018 CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 SUPERFAMILY SSF49584 142 217 1.83E-21 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 Gene3D G3DSA:2.60.40.10 24 139 1.3E-36 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 SUPERFAMILY SSF49354 20 137 9.42E-38 T 29-03-2018 IPR008962 PapD-like CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 138 6.0E-39 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 161 216 1.5E-13 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 PRINTS PR00969 Pili chaperone signature 25 34 8.9E-24 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 PRINTS PR00969 Pili chaperone signature 97 114 8.9E-24 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 PRINTS PR00969 Pili chaperone signature 120 135 8.9E-24 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 PRINTS PR00969 Pili chaperone signature 156 171 8.9E-24 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS24900 cc0f7778d270b4123d7568543a15e94b 225 Gene3D G3DSA:2.60.40.10 141 225 3.0E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS05135 73f35f80e87893d8d814a4abbad6cc05 137 Gene3D G3DSA:2.60.120.380 28 136 3.2E-12 T 29-03-2018 CKQ55_RS05135 73f35f80e87893d8d814a4abbad6cc05 137 SUPERFAMILY SSF89260 39 122 7.85E-6 T 29-03-2018 CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 SUPERFAMILY SSF141868 342 581 1.44E-75 T 29-03-2018 IPR001633 EAL domain CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 SMART SM00052 328 574 5.3E-85 T 29-03-2018 IPR001633 EAL domain CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 Gene3D G3DSA:3.30.450.40 8 161 3.7E-20 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 Pfam PF00563 EAL domain 335 569 1.1E-67 T 29-03-2018 IPR001633 EAL domain CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 SMART SM00065 25 167 7.7E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 Gene3D G3DSA:3.30.70.270 162 324 5.2E-9 T 29-03-2018 CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 SMART SM00267 153 318 6.4E-4 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 Gene3D G3DSA:3.20.20.450 325 578 1.5E-84 T 29-03-2018 IPR001633 EAL domain CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 SUPERFAMILY SSF55781 27 158 3.93E-22 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS25860 712b803969b545d4747ef3de78de84b9 590 Pfam PF13185 GAF domain 27 157 7.7E-10 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS06035 3c68001b146fe17d45b4018c639c2258 435 Gene3D G3DSA:1.10.3720.10 191 428 2.2E-40 T 29-03-2018 CKQ55_RS06035 3c68001b146fe17d45b4018c639c2258 435 SUPERFAMILY SSF160964 130 187 6.02E-8 T 29-03-2018 CKQ55_RS06035 3c68001b146fe17d45b4018c639c2258 435 Gene3D G3DSA:1.20.58.370 15 167 4.4E-11 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CKQ55_RS06035 3c68001b146fe17d45b4018c639c2258 435 SUPERFAMILY SSF161098 182 418 9.29E-54 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06035 3c68001b146fe17d45b4018c639c2258 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 418 9.9E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS15105 1a77b2776db12cf40b33d223e43b2bcc 108 SUPERFAMILY SSF50022 1 107 7.85E-36 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS15105 1a77b2776db12cf40b33d223e43b2bcc 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 2.2E-40 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CKQ55_RS15105 1a77b2776db12cf40b33d223e43b2bcc 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 2.6E-40 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CKQ55_RS15105 1a77b2776db12cf40b33d223e43b2bcc 108 Gene3D G3DSA:2.102.10.10 1 108 5.2E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CKQ55_RS10625 f0e27d4aca7e21a567c18ad4331ca119 119 SUPERFAMILY SSF81343 1 118 2.94E-51 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10625 f0e27d4aca7e21a567c18ad4331ca119 119 Pfam PF02313 Fumarate reductase subunit D 6 116 3.7E-50 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CKQ55_RS10625 f0e27d4aca7e21a567c18ad4331ca119 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 119 6.0E-56 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CKQ55_RS10625 f0e27d4aca7e21a567c18ad4331ca119 119 PIRSF PIRSF000179 1 119 5.2E-51 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CKQ55_RS10625 f0e27d4aca7e21a567c18ad4331ca119 119 Gene3D G3DSA:1.20.1300.10 1 119 1.6E-30 T 29-03-2018 CKQ55_RS10625 f0e27d4aca7e21a567c18ad4331ca119 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 26.507 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 1.7E-6 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 1.7E-6 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 9.9E-47 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 Gene3D G3DSA:3.30.930.10 9 324 2.7E-67 T 29-03-2018 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 SUPERFAMILY SSF55681 12 320 1.45E-83 T 29-03-2018 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 5.9E-133 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CKQ55_RS10605 b23dba4f28db5a2fc4c1d2a0cbc44a1c 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.699 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 Gene3D G3DSA:1.10.260.40 11 90 3.6E-16 T 29-03-2018 CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 SMART SM00530 25 80 3.2E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 Pfam PF07883 Cupin domain 126 193 1.2E-13 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 Pfam PF01381 Helix-turn-helix 26 80 9.3E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 Gene3D G3DSA:2.60.120.10 91 199 2.3E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 SUPERFAMILY SSF47413 17 82 4.5E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27485 b1f4b919dd32aa0fc9e297777c3742ae 200 SUPERFAMILY SSF51182 66 194 1.43E-20 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS12245 98b8912323453358173998fb6b3bef3e 295 Gene3D G3DSA:3.20.20.220 1 295 2.5E-102 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CKQ55_RS12245 98b8912323453358173998fb6b3bef3e 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 4.1E-108 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CKQ55_RS12245 98b8912323453358173998fb6b3bef3e 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 5.3E-107 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CKQ55_RS12245 98b8912323453358173998fb6b3bef3e 295 SUPERFAMILY SSF51730 22 294 5.3E-98 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CKQ55_RS17900 767e3b0f8adf17bd8f6c54e01e12564f 231 SUPERFAMILY SSF56935 45 231 3.66E-15 T 29-03-2018 CKQ55_RS17900 767e3b0f8adf17bd8f6c54e01e12564f 231 Gene3D G3DSA:2.40.160.40 22 231 2.2E-35 T 29-03-2018 CKQ55_RS17900 767e3b0f8adf17bd8f6c54e01e12564f 231 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 231 1.3E-61 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 SUPERFAMILY SSF51556 50 345 2.81E-23 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 SUPERFAMILY SSF51338 345 377 7.2E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 SUPERFAMILY SSF51338 1 50 7.2E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 PIRSF PIRSF038971 1 378 2.2E-155 T 29-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 Gene3D G3DSA:3.20.20.140 55 299 1.1E-10 T 29-03-2018 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 Gene3D G3DSA:2.30.40.10 1 54 2.9E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 Pfam PF07969 Amidohydrolase family 284 378 2.4E-11 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 Gene3D G3DSA:2.30.40.10 300 378 5.6E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS10865 13254d771b5181b4f83526169c6a5323 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 4.1E-163 T 29-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS31760 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 3.8E-66 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS31760 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CKQ55_RS31760 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CKQ55_RS31760 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS31410 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 3.8E-66 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS31410 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CKQ55_RS31410 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CKQ55_RS31410 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS08165 bbdceea9abd72747c22088c8aef5e1d9 588 SUPERFAMILY SSF56519 63 233 2.62E-47 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS08165 bbdceea9abd72747c22088c8aef5e1d9 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 2.0E-21 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS08165 bbdceea9abd72747c22088c8aef5e1d9 588 Gene3D G3DSA:3.40.710.10 236 585 9.4E-79 T 29-03-2018 CKQ55_RS08165 bbdceea9abd72747c22088c8aef5e1d9 588 SUPERFAMILY SSF56601 235 563 1.14E-87 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS08165 bbdceea9abd72747c22088c8aef5e1d9 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 1.1E-84 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS08165 bbdceea9abd72747c22088c8aef5e1d9 588 Gene3D G3DSA:3.90.1310.10 36 235 4.6E-44 T 29-03-2018 CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 SMART SM00267 154 322 5.9E-34 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 SUPERFAMILY SSF55781 28 154 6.28E-22 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 Gene3D G3DSA:3.30.450.40 25 156 3.5E-20 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 318 7.9E-41 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 SUPERFAMILY SSF55073 169 318 4.24E-41 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 SMART SM00065 26 171 0.0096 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 317 3.3E-41 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 Pfam PF01590 GAF domain 28 155 2.1E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 CKQ55_RS28205 ed81fd43107a9e31a7129ad10425b3dc 323 Gene3D G3DSA:3.30.70.270 157 322 1.9E-46 T 29-03-2018 CKQ55_RS01910 72e69297720422954a78c286034e14c1 150 Gene3D G3DSA:1.10.3990.20 78 139 5.4E-5 T 29-03-2018 CKQ55_RS01910 72e69297720422954a78c286034e14c1 150 Pfam PF06303 MatP N-terminal domain 2 85 7.5E-43 T 29-03-2018 IPR035087 MatP, N-terminal CKQ55_RS01910 72e69297720422954a78c286034e14c1 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.36 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CKQ55_RS01910 72e69297720422954a78c286034e14c1 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-66 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CKQ55_RS01910 72e69297720422954a78c286034e14c1 150 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 3.8E-30 T 29-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 SUPERFAMILY SSF48208 21 327 4.91E-84 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 Pfam PF01270 Glycosyl hydrolases family 8 18 328 2.4E-98 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 107 125 2.2E-26 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 2.2E-26 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 236 245 2.2E-26 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 171 188 2.2E-26 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 211 222 2.2E-26 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 PRINTS PR00735 Glycosyl hydrolase family 8 signature 315 329 2.2E-26 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 107 125 - T 29-03-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CKQ55_RS14225 933998bd191fd97cebc0ab373e0a7ef0 332 Gene3D G3DSA:1.50.10.10 18 331 2.5E-75 T 29-03-2018 CKQ55_RS06100 0ecc733e6d392262aa511478fb81144b 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 86 5.1E-26 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS06100 0ecc733e6d392262aa511478fb81144b 103 Gene3D G3DSA:1.10.10.10 2 103 2.8E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06100 0ecc733e6d392262aa511478fb81144b 103 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 6 75 4.0E-15 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS06100 0ecc733e6d392262aa511478fb81144b 103 SUPERFAMILY SSF46767 5 87 2.09E-26 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CKQ55_RS28340 a0749bb20926aca9b60c464fc7c6f092 95 Pfam PF06243 Phenylacetic acid degradation B 6 91 1.1E-39 T 29-03-2018 IPR009359 Phenylacetic acid degradation B CKQ55_RS28340 a0749bb20926aca9b60c464fc7c6f092 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 3.9E-49 T 29-03-2018 IPR009359 Phenylacetic acid degradation B CKQ55_RS28340 a0749bb20926aca9b60c464fc7c6f092 95 PIRSF PIRSF030200 1 95 9.2E-44 T 29-03-2018 IPR009359 Phenylacetic acid degradation B CKQ55_RS30570 53089314e75f3e8b9dd4ece9a7ca631f 208 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 93 204 4.7E-35 T 29-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CKQ55_RS30570 53089314e75f3e8b9dd4ece9a7ca631f 208 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 94 189 6.1E-19 T 29-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CKQ55_RS08630 d13f8dda36d71dd9e86c218ccd379c66 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CKQ55_RS08630 d13f8dda36d71dd9e86c218ccd379c66 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 3.0E-42 T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CKQ55_RS15905 f537103471beaabdfac7d6dd20d923cb 162 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 1.4E-37 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS15905 f537103471beaabdfac7d6dd20d923cb 162 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 4.4E-62 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CKQ55_RS15905 f537103471beaabdfac7d6dd20d923cb 162 Gene3D G3DSA:3.40.930.10 8 157 9.7E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS15905 f537103471beaabdfac7d6dd20d923cb 162 SUPERFAMILY SSF55804 9 155 4.19E-42 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS15905 f537103471beaabdfac7d6dd20d923cb 162 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 Pfam PF05683 Fumarase C-terminus 332 537 8.4E-91 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 PIRSF PIRSF001394 30 548 4.4E-228 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.0E-84 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 374 537 1.2E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 9.5E-30 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 SUPERFAMILY SSF117457 362 536 1.57E-59 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS25825 17379165fe8b32340a7e6d070c18dd7f 548 Gene3D G3DSA:3.20.130.10 359 536 1.8E-66 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS17225 67dcde3a17b5a0335d527c4e80b497c2 225 Pfam PF00005 ABC transporter 23 170 3.7E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS17225 67dcde3a17b5a0335d527c4e80b497c2 225 SUPERFAMILY SSF52540 21 219 2.1E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17225 67dcde3a17b5a0335d527c4e80b497c2 225 Gene3D G3DSA:3.40.50.300 6 222 1.9E-33 T 29-03-2018 CKQ55_RS17225 67dcde3a17b5a0335d527c4e80b497c2 225 SMART SM00382 27 203 7.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28685 62ecc1008ddbc1d3df79aec5c32e33d0 311 Gene3D G3DSA:3.40.50.620 7 246 3.3E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS28685 62ecc1008ddbc1d3df79aec5c32e33d0 311 PIRSF PIRSF004976 3 272 3.6E-76 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CKQ55_RS28685 62ecc1008ddbc1d3df79aec5c32e33d0 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.476 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CKQ55_RS28685 62ecc1008ddbc1d3df79aec5c32e33d0 311 SUPERFAMILY SSF52402 17 235 1.91E-54 T 29-03-2018 CKQ55_RS28685 62ecc1008ddbc1d3df79aec5c32e33d0 311 Pfam PF01171 PP-loop family 42 205 1.1E-13 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 1.4E-12 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 1.4E-12 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 1.4E-12 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 1.4E-12 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 SUPERFAMILY SSF54001 3 267 4.91E-82 T 29-03-2018 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 Pfam PF00797 N-acetyltransferase 22 256 1.7E-80 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 Gene3D G3DSA:3.30.2140.10 3 144 8.0E-39 T 29-03-2018 CKQ55_RS27770 22027fb55da894a4067b00d2204e18d4 281 Gene3D G3DSA:3.30.2140.10 145 268 1.2E-14 T 29-03-2018 CKQ55_RS17135 b16c1d54399e09dfe961d49e6878b894 234 SUPERFAMILY SSF51419 1 227 8.37E-81 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS17135 b16c1d54399e09dfe961d49e6878b894 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CKQ55_RS17135 b16c1d54399e09dfe961d49e6878b894 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 1.1E-97 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CKQ55_RS17135 b16c1d54399e09dfe961d49e6878b894 234 PIRSF PIRSF004848 1 234 1.3E-74 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CKQ55_RS17135 b16c1d54399e09dfe961d49e6878b894 234 Gene3D G3DSA:3.20.20.10 1 234 3.4E-71 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS17135 b16c1d54399e09dfe961d49e6878b894 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 4.6E-31 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CKQ55_RS11755 70d1e0322510d70ab93deaddf18427d1 482 Gene3D G3DSA:1.10.287.1060 347 416 0.0047 T 29-03-2018 CKQ55_RS11755 70d1e0322510d70ab93deaddf18427d1 482 Gene3D G3DSA:1.20.5.340 148 299 5.3E-24 T 29-03-2018 CKQ55_RS11755 70d1e0322510d70ab93deaddf18427d1 482 Pfam PF02646 RmuC family 137 434 2.4E-107 T 29-03-2018 IPR003798 DNA recombination RmuC CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 19 460 38.658 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 Gene3D G3DSA:3.30.460.10 28 190 1.2E-52 T 29-03-2018 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 Pfam PF01743 Poly A polymerase head domain 63 193 4.0E-39 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 Pfam PF12626 Polymerase A arginine-rich C-terminus 338 456 1.0E-41 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 SUPERFAMILY SSF81891 191 428 3.01E-51 T 29-03-2018 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 31 457 3.6E-158 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 SUPERFAMILY SSF81301 34 189 1.08E-39 T 29-03-2018 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 Gene3D G3DSA:1.10.3090.10 191 434 6.3E-44 T 29-03-2018 CKQ55_RS07835 5809cbc2c346c66cf776b96153897d9b 465 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 221 280 5.7E-19 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CKQ55_RS00270 6a4c8be2be4dc18a423514c734943d52 439 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 390 3.7E-97 T 29-03-2018 IPR006427 Phage portal protein, HK97 CKQ55_RS00270 6a4c8be2be4dc18a423514c734943d52 439 Pfam PF04860 Phage portal protein 53 384 2.8E-107 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.5E-16 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.135 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 PRINTS PR00094 Adenylate kinase signature 81 97 5.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 PRINTS PR00094 Adenylate kinase signature 173 187 5.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 PRINTS PR00094 Adenylate kinase signature 4 17 5.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 PRINTS PR00094 Adenylate kinase signature 32 46 5.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 PRINTS PR00094 Adenylate kinase signature 156 171 5.7E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 Gene3D G3DSA:3.40.50.300 1 214 1.5E-67 T 29-03-2018 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 SUPERFAMILY SSF52540 1 187 2.4E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 3.7E-76 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CKQ55_RS05895 fae764fb2f1e57aa2b4d27aefbf457ed 214 Pfam PF00406 Adenylate kinase 5 186 1.0E-60 T 29-03-2018 CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 Pfam PF00072 Response regulator receiver domain 7 117 1.7E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 SMART SM00448 4 117 2.6E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 Gene3D G3DSA:3.40.50.2300 3 147 5.0E-25 T 29-03-2018 CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 SUPERFAMILY SSF52172 1 155 2.13E-30 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 PIRSF PIRSF006171 2 230 1.7E-75 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 Gene3D G3DSA:1.10.10.10 160 225 1.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08485 a7081d09957fbf5dcc680712064b05ca 232 Pfam PF12431 Transcriptional regulator 133 162 2.6E-6 T 29-03-2018 IPR028141 Transcriptional regulator CKQ55_RS28495 8ab0b56a53f38dc400883a8f36d922fc 266 Gene3D G3DSA:1.20.120.330 144 261 1.9E-13 T 29-03-2018 CKQ55_RS28495 8ab0b56a53f38dc400883a8f36d922fc 266 Gene3D G3DSA:3.30.460.10 15 140 1.1E-16 T 29-03-2018 CKQ55_RS28495 8ab0b56a53f38dc400883a8f36d922fc 266 SUPERFAMILY SSF81301 7 96 4.73E-7 T 29-03-2018 CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 1.6E-50 T 29-03-2018 CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 Gene3D G3DSA:3.40.50.720 2 246 1.0E-55 T 29-03-2018 CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 SUPERFAMILY SSF51735 7 245 1.45E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26035 3b2e66a370ad097453db827402ebd74e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.8E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28365 3f31c2ee6b914da2203b8e96b09f0b13 287 PIRSF PIRSF037442 1 286 1.3E-86 T 29-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CKQ55_RS28365 3f31c2ee6b914da2203b8e96b09f0b13 287 Pfam PF12146 Serine aminopeptidase, S33 24 148 5.1E-14 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CKQ55_RS28365 3f31c2ee6b914da2203b8e96b09f0b13 287 SUPERFAMILY SSF53474 4 282 5.99E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS28365 3f31c2ee6b914da2203b8e96b09f0b13 287 Gene3D G3DSA:3.40.50.1820 2 283 2.1E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.0E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 Gene3D G3DSA:1.10.10.10 3 86 1.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 SUPERFAMILY SSF53850 91 293 2.48E-36 T 29-03-2018 CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 SUPERFAMILY SSF46785 2 84 5.32E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 Gene3D G3DSA:3.40.190.10 89 173 4.9E-15 T 29-03-2018 CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 Pfam PF03466 LysR substrate binding domain 88 288 1.2E-34 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS07090 0be5dd9eb5ab4347c3ee6d4e1e452b43 302 Gene3D G3DSA:3.40.190.10 174 257 9.7E-19 T 29-03-2018 CKQ55_RS11150 dfb575478495af338b0e7106b7be6fcf 438 Pfam PF01554 MatE 16 176 1.1E-32 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS11150 dfb575478495af338b0e7106b7be6fcf 438 Pfam PF01554 MatE 240 393 1.2E-9 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS11150 dfb575478495af338b0e7106b7be6fcf 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 409 2.8E-96 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS21735 dd4601c3bfcdeddd83ba97900f529e09 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 4.4E-112 T 29-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CKQ55_RS21735 dd4601c3bfcdeddd83ba97900f529e09 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 347 4.1E-155 T 29-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 Gene3D G3DSA:3.40.50.720 115 313 1.3E-55 T 29-03-2018 CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 310 2.3E-54 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 SUPERFAMILY SSF52283 16 131 2.34E-24 T 29-03-2018 CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 SUPERFAMILY SSF51735 99 131 2.63E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 SUPERFAMILY SSF51735 158 311 2.63E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 337 6.6E-20 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS04300 96d149c09fbaccc113364ba16d79fd65 342 Gene3D G3DSA:3.40.50.720 1 114 1.9E-27 T 29-03-2018 CKQ55_RS27835 4b40fc30e120904370692c521f8ec6c1 205 SUPERFAMILY SSF47616 79 199 2.13E-13 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS27835 4b40fc30e120904370692c521f8ec6c1 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 76 1.3E-7 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS27835 4b40fc30e120904370692c521f8ec6c1 205 Gene3D G3DSA:3.40.30.10 1 99 6.5E-12 T 29-03-2018 CKQ55_RS27835 4b40fc30e120904370692c521f8ec6c1 205 SUPERFAMILY SSF52833 2 79 2.06E-10 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS27835 4b40fc30e120904370692c521f8ec6c1 205 Gene3D G3DSA:1.20.1050.10 100 200 6.4E-10 T 29-03-2018 CKQ55_RS29895 553ca0915a1abf85e565c51562b5081f 294 PIRSF PIRSF016020 9 294 1.1E-54 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CKQ55_RS29895 553ca0915a1abf85e565c51562b5081f 294 SUPERFAMILY SSF74650 8 274 1.51E-66 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS29895 553ca0915a1abf85e565c51562b5081f 294 Pfam PF01263 Aldose 1-epimerase 28 268 6.0E-43 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CKQ55_RS29895 553ca0915a1abf85e565c51562b5081f 294 Gene3D G3DSA:2.70.98.10 1 294 1.1E-65 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS19760 671a7ef9711be2c404595029da2556ba 456 Pfam PF03929 PepSY-associated TM region 15 386 9.1E-61 T 29-03-2018 IPR005625 PepSY-associated TM protein CKQ55_RS10125 e21b35af4ea4a4bf943621cfe502c213 712 Pfam PF03477 ATP cone domain 4 89 1.2E-20 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CKQ55_RS10125 e21b35af4ea4a4bf943621cfe502c213 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CKQ55_RS10125 e21b35af4ea4a4bf943621cfe502c213 712 SUPERFAMILY SSF51998 121 687 2.06E-199 T 29-03-2018 CKQ55_RS10125 e21b35af4ea4a4bf943621cfe502c213 712 Gene3D G3DSA:3.20.70.20 121 687 5.1E-210 T 29-03-2018 CKQ55_RS10125 e21b35af4ea4a4bf943621cfe502c213 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.7E-210 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CKQ55_RS10125 e21b35af4ea4a4bf943621cfe502c213 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.5E-182 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CKQ55_RS13540 a3878e538c3a122b84482838dcd2fdc1 310 Gene3D G3DSA:3.30.420.40 2 116 3.5E-24 T 29-03-2018 CKQ55_RS13540 a3878e538c3a122b84482838dcd2fdc1 310 Pfam PF00480 ROK family 3 299 6.8E-72 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS13540 a3878e538c3a122b84482838dcd2fdc1 310 ProSitePatterns PS01125 ROK family signature. 131 158 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS13540 a3878e538c3a122b84482838dcd2fdc1 310 SUPERFAMILY SSF53067 1 299 1.87E-60 T 29-03-2018 CKQ55_RS13540 a3878e538c3a122b84482838dcd2fdc1 310 Gene3D G3DSA:3.30.420.40 117 310 2.8E-46 T 29-03-2018 CKQ55_RS29540 8046e908fda574a19af21527cd29057e 315 SUPERFAMILY SSF50129 1 137 2.02E-20 T 29-03-2018 IPR011032 GroES-like CKQ55_RS29540 8046e908fda574a19af21527cd29057e 315 Gene3D G3DSA:3.40.50.720 135 259 3.5E-17 T 29-03-2018 CKQ55_RS29540 8046e908fda574a19af21527cd29057e 315 SMART SM00829 8 287 2.9E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS29540 8046e908fda574a19af21527cd29057e 315 SUPERFAMILY SSF51735 104 265 2.14E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29540 8046e908fda574a19af21527cd29057e 315 Gene3D G3DSA:3.90.180.10 1 134 5.3E-23 T 29-03-2018 CKQ55_RS21325 a8ade26f793ec4ca7ce0ba598e806681 267 Gene3D G3DSA:3.20.20.60 1 267 1.6E-52 T 29-03-2018 CKQ55_RS21325 a8ade26f793ec4ca7ce0ba598e806681 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 7.3E-66 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CKQ55_RS21325 a8ade26f793ec4ca7ce0ba598e806681 267 SUPERFAMILY SSF51621 5 257 2.34E-81 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS07300 4b46b7e11b1c658b06aad75ebc8eebe8 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 197 1.2E-104 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS07300 4b46b7e11b1c658b06aad75ebc8eebe8 198 PIRSF PIRSF006102 1 198 2.4E-64 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS07300 4b46b7e11b1c658b06aad75ebc8eebe8 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.827 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS07300 4b46b7e11b1c658b06aad75ebc8eebe8 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.0E-58 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 Gene3D G3DSA:1.10.10.60 1 32 2.5E-15 T 29-03-2018 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 47 4.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 3 16 4.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 47 1.3E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 Gene3D G3DSA:1.10.260.40 33 139 2.2E-8 T 29-03-2018 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 SUPERFAMILY SSF46689 2 65 4.22E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS00945 01e939f09d05b734b692cd2c124654a5 182 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 69 179 1.5E-6 T 29-03-2018 CKQ55_RS11345 fd23eeeacd484f5c0c11c13e1755acab 105 SUPERFAMILY SSF50118 3 105 5.17E-19 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS11345 fd23eeeacd484f5c0c11c13e1755acab 105 Pfam PF01845 CcdB protein 3 104 1.3E-24 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS11345 fd23eeeacd484f5c0c11c13e1755acab 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 17 81 2.0E-5 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS11345 fd23eeeacd484f5c0c11c13e1755acab 105 Gene3D G3DSA:2.30.30.110 3 104 4.5E-19 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS12635 8d7a9afa1ecab81480cea7a4565cccc0 280 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 18 279 1.2E-90 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS18885 19bc7741b6e40a552855cdc7ae9d2d7d 83 Gene3D G3DSA:1.10.1200.10 2 83 2.7E-14 T 29-03-2018 CKQ55_RS18885 19bc7741b6e40a552855cdc7ae9d2d7d 83 Pfam PF00550 Phosphopantetheine attachment site 9 77 2.0E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS18885 19bc7741b6e40a552855cdc7ae9d2d7d 83 SUPERFAMILY SSF47336 5 80 8.64E-15 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS11830 069ff5bd41f53d33b790b963fbdffc98 297 SUPERFAMILY SSF103481 190 285 9.42E-8 T 29-03-2018 CKQ55_RS11830 069ff5bd41f53d33b790b963fbdffc98 297 SUPERFAMILY SSF103481 42 145 5.49E-14 T 29-03-2018 CKQ55_RS11830 069ff5bd41f53d33b790b963fbdffc98 297 Pfam PF00892 EamA-like transporter family 8 142 3.1E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS11830 069ff5bd41f53d33b790b963fbdffc98 297 TIGRFAM TIGR00688 rarD: protein RarD 9 261 1.5E-109 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 2.9E-17 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 Gene3D G3DSA:1.20.5.710 2 50 1.1E-17 T 29-03-2018 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.4E-31 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-26 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.2E-48 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 SUPERFAMILY SSF48300 3 57 3.53E-16 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 Gene3D G3DSA:3.30.1390.10 51 121 2.1E-31 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.537 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS11555 62b7444128319f543c1ea42ca844f1b3 121 SUPERFAMILY SSF54736 50 121 1.57E-25 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CKQ55_RS06145 caf68447d813a3684fa3f4044143033f 350 Gene3D G3DSA:3.40.50.1100 29 140 6.3E-22 T 29-03-2018 CKQ55_RS06145 caf68447d813a3684fa3f4044143033f 350 SUPERFAMILY SSF53686 11 332 1.31E-68 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS06145 caf68447d813a3684fa3f4044143033f 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 313 3.6E-42 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS06145 caf68447d813a3684fa3f4044143033f 350 Gene3D G3DSA:3.40.50.1100 141 329 1.1E-37 T 29-03-2018 CKQ55_RS08640 33da73b1bea4d968f7efab380009f571 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 4.0E-26 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS08640 33da73b1bea4d968f7efab380009f571 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CKQ55_RS08640 33da73b1bea4d968f7efab380009f571 195 SMART SM00852 7 153 9.6E-21 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS08640 33da73b1bea4d968f7efab380009f571 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 4.5E-39 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS08640 33da73b1bea4d968f7efab380009f571 195 Gene3D G3DSA:3.40.980.10 1 188 2.3E-38 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS08640 33da73b1bea4d968f7efab380009f571 195 SUPERFAMILY SSF53218 3 188 1.83E-46 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS15980 5ce3cab26448f2d0f28297474050f0a2 419 SUPERFAMILY SSF55205 1 418 4.91E-148 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CKQ55_RS15980 5ce3cab26448f2d0f28297474050f0a2 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.483 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS15980 5ce3cab26448f2d0f28297474050f0a2 419 Gene3D G3DSA:3.65.10.10 21 219 1.1E-52 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CKQ55_RS15980 5ce3cab26448f2d0f28297474050f0a2 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 3.7E-131 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CKQ55_RS15980 5ce3cab26448f2d0f28297474050f0a2 419 Gene3D G3DSA:3.65.10.10 220 418 1.9E-49 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CKQ55_RS15980 5ce3cab26448f2d0f28297474050f0a2 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 9.5E-186 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS11905 a585f82d756bf5574b719c4e5e8b60cd 246 Gene3D G3DSA:3.40.50.10090 121 246 3.9E-23 T 29-03-2018 CKQ55_RS11905 a585f82d756bf5574b719c4e5e8b60cd 246 Gene3D G3DSA:3.40.50.10090 1 120 1.5E-17 T 29-03-2018 CKQ55_RS11905 a585f82d756bf5574b719c4e5e8b60cd 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 2.8E-41 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS11905 a585f82d756bf5574b719c4e5e8b60cd 246 SUPERFAMILY SSF69618 1 245 3.53E-55 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CKQ55_RS07285 9552363d6a3c26d230496fd65569d4f8 285 Gene3D G3DSA:3.20.20.190 12 285 2.1E-47 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CKQ55_RS07285 9552363d6a3c26d230496fd65569d4f8 285 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 25 280 1.4E-21 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CKQ55_RS07285 9552363d6a3c26d230496fd65569d4f8 285 SUPERFAMILY SSF51695 20 284 3.4E-50 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.463 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 Gene3D G3DSA:3.40.50.2030 235 375 2.4E-63 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 1.9E-231 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 PIRSF PIRSF000076 1 550 2.3E-239 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 SUPERFAMILY SSF56821 1 548 2.35E-189 T 29-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 Gene3D G3DSA:1.20.1270.20 1 144 5.1E-36 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 Gene3D G3DSA:3.40.50.2030 376 550 5.0E-59 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 Gene3D G3DSA:1.20.1270.20 150 232 4.5E-21 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS02300 019550b0d3cc6d829e0c426cb11dfe60 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 3.6E-155 T 29-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CKQ55_RS09290 3c2317dddfb92bd3e10765723097c17c 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 114 1.3E-9 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS09290 3c2317dddfb92bd3e10765723097c17c 147 Gene3D G3DSA:3.10.180.10 1 138 6.4E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS09290 3c2317dddfb92bd3e10765723097c17c 147 SUPERFAMILY SSF54593 1 132 2.06E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS02245 798f49dc23a659e7b16dc1531a8bf6ba 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 218 3.5E-86 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CKQ55_RS02245 798f49dc23a659e7b16dc1531a8bf6ba 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 1.2E-71 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CKQ55_RS02245 798f49dc23a659e7b16dc1531a8bf6ba 234 SUPERFAMILY SSF55729 2 228 1.27E-93 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS02245 798f49dc23a659e7b16dc1531a8bf6ba 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.038 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CKQ55_RS24395 72f7e0567393a8c9c5c31d4c8907db74 559 SUPERFAMILY SSF52091 451 557 2.75E-14 T 29-03-2018 IPR002645 STAS domain CKQ55_RS24395 72f7e0567393a8c9c5c31d4c8907db74 559 TIGRFAM TIGR00815 sulP: sulfate permease 18 555 9.3E-145 T 29-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CKQ55_RS24395 72f7e0567393a8c9c5c31d4c8907db74 559 Pfam PF01740 STAS domain 451 553 2.0E-11 T 29-03-2018 IPR002645 STAS domain CKQ55_RS24395 72f7e0567393a8c9c5c31d4c8907db74 559 Pfam PF00916 Sulfate permease family 29 411 2.4E-75 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CKQ55_RS24395 72f7e0567393a8c9c5c31d4c8907db74 559 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CKQ55_RS24395 72f7e0567393a8c9c5c31d4c8907db74 559 Gene3D G3DSA:3.30.750.24 442 559 7.5E-15 T 29-03-2018 IPR002645 STAS domain CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 SMART SM00342 227 310 6.0E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 Pfam PF12852 Cupin 7 195 4.3E-30 T 29-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 SUPERFAMILY SSF46689 263 311 2.06E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 Gene3D G3DSA:1.10.10.60 264 317 7.3E-9 T 29-03-2018 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 Gene3D G3DSA:1.10.10.60 204 263 9.4E-12 T 29-03-2018 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 Pfam PF12833 Helix-turn-helix domain 233 310 1.6E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 Gene3D G3DSA:2.60.120.280 10 196 3.9E-7 T 29-03-2018 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS26725 f0ba1a3f20aba1a4ddaaed3e14938e2b 318 SUPERFAMILY SSF46689 210 261 4.84E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS15150 9bc59d468f77786993d4742dee94815a 692 Pfam PF13515 Fusaric acid resistance protein-like 376 498 2.3E-20 T 29-03-2018 CKQ55_RS15150 9bc59d468f77786993d4742dee94815a 692 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 674 1.2E-233 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CKQ55_RS15150 9bc59d468f77786993d4742dee94815a 692 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 2.5E-69 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CKQ55_RS22720 4966a1e9f55e50a576e207b037e60d65 377 Pfam PF13477 Glycosyl transferase 4-like 3 130 6.5E-22 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CKQ55_RS22720 4966a1e9f55e50a576e207b037e60d65 377 Pfam PF00534 Glycosyl transferases group 1 193 353 1.7E-25 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS22720 4966a1e9f55e50a576e207b037e60d65 377 Gene3D G3DSA:3.40.50.2000 19 188 2.5E-9 T 29-03-2018 CKQ55_RS22720 4966a1e9f55e50a576e207b037e60d65 377 SUPERFAMILY SSF53756 22 375 3.19E-56 T 29-03-2018 CKQ55_RS22720 4966a1e9f55e50a576e207b037e60d65 377 Gene3D G3DSA:3.40.50.2000 189 359 5.4E-31 T 29-03-2018 CKQ55_RS28810 316455f4c54c3000021ebc6e03349947 241 Gene3D G3DSA:1.10.1660.10 1 150 4.2E-24 T 29-03-2018 CKQ55_RS28810 316455f4c54c3000021ebc6e03349947 241 SMART SM00422 3 72 2.1E-26 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS28810 316455f4c54c3000021ebc6e03349947 241 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.4E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS28810 316455f4c54c3000021ebc6e03349947 241 SUPERFAMILY SSF46955 2 93 9.16E-20 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS28810 316455f4c54c3000021ebc6e03349947 241 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 29 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 Gene3D G3DSA:3.90.180.10 1 153 1.4E-43 T 29-03-2018 CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 2.8E-27 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 SUPERFAMILY SSF51735 140 313 2.8E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 Gene3D G3DSA:3.40.50.720 154 320 5.9E-27 T 29-03-2018 CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 SMART SM00829 10 344 0.001 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 SUPERFAMILY SSF50129 1 170 2.74E-47 T 29-03-2018 IPR011032 GroES-like CKQ55_RS16220 7294bd43502bc4c8c63b8ebd0f72fbf7 347 Pfam PF00107 Zinc-binding dehydrogenase 172 307 1.6E-22 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS01405 fa43b1602d69fd8d77a235bc5ce39b8b 174 Gene3D G3DSA:2.40.160.20 14 118 5.0E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS13570 8f25a1f760eeac7e1da8a58092e5ab40 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 2.7E-138 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS13570 8f25a1f760eeac7e1da8a58092e5ab40 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CKQ55_RS13570 8f25a1f760eeac7e1da8a58092e5ab40 463 Pfam PF00860 Permease family 34 426 5.3E-108 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS04850 371639432b75cba121e16cdea7088323 147 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 18 139 2.4E-32 T 29-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CKQ55_RS04850 371639432b75cba121e16cdea7088323 147 SUPERFAMILY SSF49899 18 144 1.5E-31 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS04850 371639432b75cba121e16cdea7088323 147 Gene3D G3DSA:2.60.120.560 17 145 6.0E-39 T 29-03-2018 CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 2.6E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 SUPERFAMILY SSF52540 23 264 1.98E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 SMART SM00382 49 242 7.1E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 Gene3D G3DSA:3.40.50.300 8 331 6.1E-80 T 29-03-2018 CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 Pfam PF00005 ABC transporter 41 192 3.7E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24650 4dc27db352090679716e3697fdadd41b 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.4E-28 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS27185 19743687edddc256560453c4297963cc 146 SMART SM00530 18 72 3.6E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27185 19743687edddc256560453c4297963cc 146 Pfam PF01381 Helix-turn-helix 19 66 5.6E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27185 19743687edddc256560453c4297963cc 146 SUPERFAMILY SSF47413 8 66 3.94E-10 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27185 19743687edddc256560453c4297963cc 146 Gene3D G3DSA:1.10.260.40 5 66 3.5E-11 T 29-03-2018 CKQ55_RS24535 95938f3ff0e8367384e036bb477b33c9 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 2.5E-54 T 29-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CKQ55_RS24535 95938f3ff0e8367384e036bb477b33c9 236 Pfam PF02613 Nitrate reductase delta subunit 40 151 1.0E-11 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS24535 95938f3ff0e8367384e036bb477b33c9 236 Gene3D G3DSA:1.10.3480.10 4 183 3.3E-32 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS24535 95938f3ff0e8367384e036bb477b33c9 236 SUPERFAMILY SSF89155 5 163 2.3E-32 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CKQ55_RS01535 c80fa34bc35187166d71e6634762f53d 96 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 84 3.8E-29 T 29-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CKQ55_RS01535 c80fa34bc35187166d71e6634762f53d 96 PIRSF PIRSF002736 1 96 4.6E-38 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS01535 c80fa34bc35187166d71e6634762f53d 96 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 79 5.0E-22 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS01535 c80fa34bc35187166d71e6634762f53d 96 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 93 2.3E-31 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS01535 c80fa34bc35187166d71e6634762f53d 96 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 96 25.789 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CKQ55_RS04080 8223b1b2a7bc5038fc85f336c0b33e16 241 PIRSF PIRSF039085 1 241 1.7E-104 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS04080 8223b1b2a7bc5038fc85f336c0b33e16 241 Gene3D G3DSA:3.40.50.300 1 241 4.8E-71 T 29-03-2018 CKQ55_RS04080 8223b1b2a7bc5038fc85f336c0b33e16 241 SMART SM00382 26 213 1.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04080 8223b1b2a7bc5038fc85f336c0b33e16 241 Pfam PF00005 ABC transporter 17 165 2.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04080 8223b1b2a7bc5038fc85f336c0b33e16 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04080 8223b1b2a7bc5038fc85f336c0b33e16 241 SUPERFAMILY SSF52540 1 235 1.33E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11895 5fce49bcfaea01fcbea93ffbf65d56f2 849 PIRSF PIRSF001444 1 848 0.0 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CKQ55_RS11895 5fce49bcfaea01fcbea93ffbf65d56f2 849 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CKQ55_RS11895 5fce49bcfaea01fcbea93ffbf65d56f2 849 Pfam PF01295 Adenylate cyclase, class-I 228 825 3.8E-256 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CKQ55_RS11895 5fce49bcfaea01fcbea93ffbf65d56f2 849 Pfam PF12633 Adenylate cyclase NT domain 5 200 8.4E-81 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CKQ55_RS11895 5fce49bcfaea01fcbea93ffbf65d56f2 849 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CKQ55_RS12550 df75fa0af4e572665f354c07588587b8 444 Pfam PF14535 AMP-binding enzyme C-terminal domain 340 435 3.4E-6 T 29-03-2018 IPR028154 AMP-dependent ligase, C-terminal CKQ55_RS12550 df75fa0af4e572665f354c07588587b8 444 SUPERFAMILY SSF56801 23 327 4.19E-18 T 29-03-2018 CKQ55_RS12550 df75fa0af4e572665f354c07588587b8 444 Gene3D G3DSA:3.40.50.980 82 252 9.6E-14 T 29-03-2018 CKQ55_RS12550 df75fa0af4e572665f354c07588587b8 444 Pfam PF00501 AMP-binding enzyme 91 291 1.6E-7 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS28850 d16e46237b6722a6277c19431bb79c46 460 Pfam PF02264 LamB porin 83 460 1.1E-77 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS28850 d16e46237b6722a6277c19431bb79c46 460 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 358 453 2.0E-4 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS28850 d16e46237b6722a6277c19431bb79c46 460 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 109 208 1.0E-44 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS28850 d16e46237b6722a6277c19431bb79c46 460 SUPERFAMILY SSF56935 81 460 2.2E-89 T 29-03-2018 CKQ55_RS28850 d16e46237b6722a6277c19431bb79c46 460 Gene3D G3DSA:2.40.170.10 81 460 5.4E-78 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 Gene3D G3DSA:3.40.50.720 171 326 1.7E-29 T 29-03-2018 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 182 323 2.4E-34 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 SMART SM00997 168 326 9.4E-59 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 9 126 3.0E-12 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 SUPERFAMILY SSF51735 168 326 1.06E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 SUPERFAMILY SSF52283 327 364 1.11E-24 T 29-03-2018 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 SUPERFAMILY SSF52283 9 167 1.11E-24 T 29-03-2018 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 SMART SM00996 3 367 1.7E-10 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CKQ55_RS22940 c4346c2378d8ba1648498f3d61783dda 369 Gene3D G3DSA:3.40.50.1480 4 142 2.4E-21 T 29-03-2018 CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 459 2.8E-204 T 29-03-2018 IPR012831 Precorrin 3B synthase CobZ CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 SUPERFAMILY SSF51905 394 461 5.81E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 SUPERFAMILY SSF51905 2 230 5.81E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 Gene3D G3DSA:3.90.700.10 254 398 1.1E-29 T 29-03-2018 CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 SUPERFAMILY SSF56425 263 400 1.05E-24 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 Pfam PF00890 FAD binding domain 3 431 3.6E-31 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03930 8c3d455fe7dd092d7b41879e1cc69a10 467 Gene3D G3DSA:3.50.50.60 1 206 1.2E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS20025 a75e1babef4a7fa5089c160baa5e4f9d 234 Pfam PF13942 YfhG lipoprotein 45 218 2.7E-75 T 29-03-2018 IPR025262 Quorum-sensing regulator protein G CKQ55_RS20025 a75e1babef4a7fa5089c160baa5e4f9d 234 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 22 219 4.0E-70 T 29-03-2018 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 SUPERFAMILY SSF118215 29 443 4.32E-97 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 Gene3D G3DSA:1.10.3860.10 19 450 2.4E-97 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS29620 32256cb8e028b2c3cc1622c7ce9965a6 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 7.4E-104 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS07365 22195605cd817a2091d8f8adc216603c 155 SUPERFAMILY SSF53098 4 143 3.16E-59 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07365 22195605cd817a2091d8f8adc216603c 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 39.036 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 CKQ55_RS07365 22195605cd817a2091d8f8adc216603c 155 Gene3D G3DSA:3.30.420.10 1 155 2.2E-54 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07365 22195605cd817a2091d8f8adc216603c 155 Pfam PF00075 RNase H 3 141 4.1E-54 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CKQ55_RS19910 8db21b874d03b6a15d5584e7bcb95ceb 246 SUPERFAMILY SSF53335 15 176 1.78E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS19910 8db21b874d03b6a15d5584e7bcb95ceb 246 Pfam PF05175 Methyltransferase small domain 45 128 4.5E-14 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CKQ55_RS19910 8db21b874d03b6a15d5584e7bcb95ceb 246 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 246 55.613 T 29-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 CKQ55_RS19910 8db21b874d03b6a15d5584e7bcb95ceb 246 Gene3D G3DSA:3.40.50.150 32 240 2.9E-30 T 29-03-2018 CKQ55_RS19910 8db21b874d03b6a15d5584e7bcb95ceb 246 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 Gene3D G3DSA:1.10.287.130 236 307 3.3E-5 T 29-03-2018 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 SMART SM00388 246 311 2.6E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 464 1.2E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 SUPERFAMILY SSF55874 318 464 1.57E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 Pfam PF08521 Two-component sensor kinase N-terminal 21 168 8.6E-38 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 SUPERFAMILY SSF47384 229 309 1.53E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 SMART SM00387 358 469 1.7E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 309 8.4E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 Gene3D G3DSA:1.20.5.1040 7 61 2.9E-7 T 29-03-2018 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 Gene3D G3DSA:3.30.565.10 315 465 4.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.4E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.4E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS21280 6a81a94a243532ee56e1617c9d999cdb 471 SMART SM00304 193 245 2.7E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS31125 c14de0163be134d8847664467dadf5ff 877 SUPERFAMILY SSF52540 442 769 4.91E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31125 c14de0163be134d8847664467dadf5ff 877 Gene3D G3DSA:3.40.50.300 421 793 3.7E-18 T 29-03-2018 CKQ55_RS31125 c14de0163be134d8847664467dadf5ff 877 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 45 856 6.5E-270 T 29-03-2018 IPR014117 Type-IV secretion system protein TraC CKQ55_RS31125 c14de0163be134d8847664467dadf5ff 877 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 39 277 1.6E-47 T 29-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.7E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.7E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.7E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.7E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 5.4E-98 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 8.7E-23 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 1.9E-236 T 29-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 9.5E-55 T 29-03-2018 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 9.5E-55 T 29-03-2018 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 9.5E-55 T 29-03-2018 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 9.5E-55 T 29-03-2018 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 9.5E-55 T 29-03-2018 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 9.5E-55 T 29-03-2018 CKQ55_RS21165 c735ba2ce54357d70a001958dbefe380 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 9.5E-55 T 29-03-2018 CKQ55_RS10190 20bdbb7961bd847dc009909c20e8318e 99 Pfam PF14189 Domain of unknown function (DUF4312) 5 88 4.1E-34 T 29-03-2018 IPR020037 Protein of unknown function DUF4312 CKQ55_RS10190 20bdbb7961bd847dc009909c20e8318e 99 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 1.5E-40 T 29-03-2018 IPR020037 Protein of unknown function DUF4312 CKQ55_RS05920 d6b22d97966b42096a46187fcd8090ee 183 Pfam PF00156 Phosphoribosyl transferase domain 31 155 1.5E-16 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CKQ55_RS05920 d6b22d97966b42096a46187fcd8090ee 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.142 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CKQ55_RS05920 d6b22d97966b42096a46187fcd8090ee 183 Gene3D G3DSA:3.40.50.2020 4 180 7.9E-44 T 29-03-2018 CKQ55_RS05920 d6b22d97966b42096a46187fcd8090ee 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 6.2E-73 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CKQ55_RS05920 d6b22d97966b42096a46187fcd8090ee 183 SUPERFAMILY SSF53271 13 180 6.82E-54 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS29105 274bff7866b444a7c5a9238ccf841c61 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 20 201 3.7E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29105 274bff7866b444a7c5a9238ccf841c61 217 SUPERFAMILY SSF161098 4 187 4.06E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29105 274bff7866b444a7c5a9238ccf841c61 217 Gene3D G3DSA:1.10.3720.10 1 206 3.7E-37 T 29-03-2018 CKQ55_RS29105 274bff7866b444a7c5a9238ccf841c61 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 2 96 6.7E-29 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS14825 14c6359f9a687e7072ff0f0de9615c33 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14825 14c6359f9a687e7072ff0f0de9615c33 237 PIRSF PIRSF039137 1 237 1.9E-104 T 29-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CKQ55_RS14825 14c6359f9a687e7072ff0f0de9615c33 237 SUPERFAMILY SSF52540 4 234 9.27E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14825 14c6359f9a687e7072ff0f0de9615c33 237 SMART SM00382 30 216 7.5E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14825 14c6359f9a687e7072ff0f0de9615c33 237 Pfam PF00005 ABC transporter 21 165 3.1E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14825 14c6359f9a687e7072ff0f0de9615c33 237 Gene3D G3DSA:3.40.50.300 1 237 1.5E-60 T 29-03-2018 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 Gene3D G3DSA:3.40.50.1000 2 225 3.7E-16 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 42.13 T 29-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 196 6.1E-7 T 29-03-2018 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 SUPERFAMILY SSF56784 1 222 4.99E-60 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 6.7E-106 T 29-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 196 9.8E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS04260 327fa8c81330eca61649a970556a0f05 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 1.3E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS26225 72f49121695a23a5bfe34f500897a4fe 458 Pfam PF07690 Major Facilitator Superfamily 21 345 8.1E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS26225 72f49121695a23a5bfe34f500897a4fe 458 Gene3D G3DSA:1.20.1250.20 232 444 1.2E-19 T 29-03-2018 CKQ55_RS26225 72f49121695a23a5bfe34f500897a4fe 458 Gene3D G3DSA:1.20.1250.20 13 225 1.3E-22 T 29-03-2018 CKQ55_RS26225 72f49121695a23a5bfe34f500897a4fe 458 SUPERFAMILY SSF103473 12 436 4.58E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29040 5c26110010d9588416f0158e08675ee3 336 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 319 1.7E-54 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS29040 5c26110010d9588416f0158e08675ee3 336 Gene3D G3DSA:3.40.50.1100 144 331 3.0E-28 T 29-03-2018 CKQ55_RS29040 5c26110010d9588416f0158e08675ee3 336 PIRSF PIRSF006278 1 330 2.5E-102 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CKQ55_RS29040 5c26110010d9588416f0158e08675ee3 336 SUPERFAMILY SSF53686 4 319 1.78E-86 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS29040 5c26110010d9588416f0158e08675ee3 336 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 10 324 4.5E-92 T 29-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CKQ55_RS29040 5c26110010d9588416f0158e08675ee3 336 Gene3D G3DSA:3.40.50.1100 48 143 2.0E-31 T 29-03-2018 CKQ55_RS27985 b7bddd5be9c2658fc8e4c9f10cb205de 418 ProSitePatterns PS00503 Pectinesterase signature 2. 274 283 - T 29-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CKQ55_RS27985 b7bddd5be9c2658fc8e4c9f10cb205de 418 Pfam PF01095 Pectinesterase 193 346 3.4E-15 T 29-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CKQ55_RS27985 b7bddd5be9c2658fc8e4c9f10cb205de 418 SUPERFAMILY SSF51126 186 376 1.79E-45 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS27985 b7bddd5be9c2658fc8e4c9f10cb205de 418 SUPERFAMILY SSF51126 76 151 1.79E-45 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS27985 b7bddd5be9c2658fc8e4c9f10cb205de 418 Gene3D G3DSA:2.160.20.10 70 418 2.0E-58 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS13960 ee46add8480ea5579bb46e6fafa3617a 309 Pfam PF16154 Domain of unknown function (DUF4862) 9 297 3.6E-94 T 29-03-2018 IPR032344 Protein of unknown function DUF4862 CKQ55_RS13960 ee46add8480ea5579bb46e6fafa3617a 309 SUPERFAMILY SSF51658 17 238 9.67E-11 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS13960 ee46add8480ea5579bb46e6fafa3617a 309 Gene3D G3DSA:3.20.20.150 58 225 0.0024 T 29-03-2018 CKQ55_RS30020 42bb8d2aa6ae08e480854364772806d1 315 Pfam PF16220 Domain of unknown function (DUF4880) 15 56 4.9E-10 T 29-03-2018 IPR032623 FecR, N-terminal CKQ55_RS30020 42bb8d2aa6ae08e480854364772806d1 315 Pfam PF04773 FecR protein 110 202 1.3E-15 T 29-03-2018 IPR006860 FecR protein CKQ55_RS30020 42bb8d2aa6ae08e480854364772806d1 315 PIRSF PIRSF018266 3 315 2.3E-82 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 9.2E-84 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 SUPERFAMILY SSF82866 410 606 7.72E-40 T 29-03-2018 CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 3.9E-151 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 3.3E-37 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 Pfam PF02355 Protein export membrane protein 433 601 2.7E-14 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 Gene3D G3DSA:1.20.1640.10 390 609 9.3E-30 T 29-03-2018 CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 Pfam PF07549 SecD/SecF GG Motif 120 140 4.9E-6 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CKQ55_RS06425 77ef1f1f3af0ae8f15f02a91b952b47a 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 50.534 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CKQ55_RS23590 149b4e4642eedf4c849191bcf1c75ed7 474 Gene3D G3DSA:3.40.50.2000 1 236 1.1E-71 T 29-03-2018 CKQ55_RS23590 149b4e4642eedf4c849191bcf1c75ed7 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 452 4.5E-183 T 29-03-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 CKQ55_RS23590 149b4e4642eedf4c849191bcf1c75ed7 474 Gene3D G3DSA:3.40.50.2000 237 437 1.0E-39 T 29-03-2018 CKQ55_RS23590 149b4e4642eedf4c849191bcf1c75ed7 474 SUPERFAMILY SSF53756 2 454 3.08E-150 T 29-03-2018 CKQ55_RS23590 149b4e4642eedf4c849191bcf1c75ed7 474 Pfam PF00982 Glycosyltransferase family 20 17 452 1.3E-147 T 29-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 CKQ55_RS30200 d1412bc10e2e5c641872d7444bf3b894 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 3.2E-54 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 CKQ55_RS30200 d1412bc10e2e5c641872d7444bf3b894 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 2.6E-157 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CKQ55_RS14900 c082084eaf35f766518ff7851947c810 345 Gene3D G3DSA:3.30.360.10 135 335 1.2E-26 T 29-03-2018 CKQ55_RS14900 c082084eaf35f766518ff7851947c810 345 Gene3D G3DSA:3.40.50.720 1 134 3.9E-32 T 29-03-2018 CKQ55_RS14900 c082084eaf35f766518ff7851947c810 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 238 2.3E-13 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS14900 c082084eaf35f766518ff7851947c810 345 SUPERFAMILY SSF51735 5 195 8.31E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14900 c082084eaf35f766518ff7851947c810 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 6.3E-27 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 Gene3D G3DSA:3.40.190.10 87 175 2.9E-21 T 29-03-2018 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 Gene3D G3DSA:1.10.10.10 1 82 4.5E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 SUPERFAMILY SSF46785 1 86 1.27E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.5E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 Pfam PF03466 LysR substrate binding domain 89 292 3.0E-53 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 SUPERFAMILY SSF53850 89 295 2.02E-46 T 29-03-2018 CKQ55_RS12185 e8454ecd7d913c5f827c35f04733881b 305 Gene3D G3DSA:3.40.190.10 176 264 1.9E-29 T 29-03-2018 CKQ55_RS17240 2581e5983bda4502cedbfd43515d8e67 141 SUPERFAMILY SSF117856 8 139 3.4E-35 T 29-03-2018 CKQ55_RS17240 2581e5983bda4502cedbfd43515d8e67 141 Gene3D G3DSA:3.30.1330.80 11 141 1.5E-37 T 29-03-2018 CKQ55_RS17240 2581e5983bda4502cedbfd43515d8e67 141 Pfam PF03479 Domain of unknown function (DUF296) 13 119 5.4E-22 T 29-03-2018 IPR005175 PPC domain CKQ55_RS22815 71e9f9dffbce1f1a4659ff345012db5a 148 Pfam PF04319 NifZ domain 3 73 9.2E-27 T 29-03-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Pfam PF04851 Type III restriction enzyme, res subunit 452 631 4.7E-34 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Pfam PF08463 EcoEI R protein C-terminal 1012 1171 3.0E-29 T 29-03-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Gene3D G3DSA:1.20.120.330 106 249 6.8E-4 T 29-03-2018 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Pfam PF00271 Helicase conserved C-terminal domain 725 835 6.3E-11 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 SMART SM00490 748 837 5.9E-5 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Gene3D G3DSA:3.40.50.300 426 650 5.7E-27 T 29-03-2018 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 263 392 5.4E-8 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 SUPERFAMILY SSF52540 467 633 1.25E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 SUPERFAMILY SSF52540 700 849 1.25E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 Gene3D G3DSA:3.40.50.300 707 937 2.3E-18 T 29-03-2018 CKQ55_RS09250 51ea6d57a53e7c7c9f119a9ecb4ff71e 1176 SMART SM00487 449 659 1.5E-15 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS17850 18cca3887a12f267e7116d12eafd603f 331 Pfam PF00419 Fimbrial protein 182 330 1.8E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17850 18cca3887a12f267e7116d12eafd603f 331 Gene3D G3DSA:2.60.40.1090 179 331 9.8E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17850 18cca3887a12f267e7116d12eafd603f 331 Gene3D G3DSA:2.60.40.1090 51 162 0.62 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17850 18cca3887a12f267e7116d12eafd603f 331 SUPERFAMILY SSF49401 186 331 3.38E-20 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS20560 b8327da49c94db06c822c7e83e87fb4b 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 2.7E-20 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS20560 b8327da49c94db06c822c7e83e87fb4b 141 PIRSF PIRSF037663 1 130 5.8E-11 T 29-03-2018 IPR017255 Acetyltransferase, GNAT, predicted CKQ55_RS20560 b8327da49c94db06c822c7e83e87fb4b 141 SUPERFAMILY SSF55729 1 129 1.34E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS20560 b8327da49c94db06c822c7e83e87fb4b 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 48.236 T 29-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 CKQ55_RS20560 b8327da49c94db06c822c7e83e87fb4b 141 Gene3D G3DSA:3.40.630.30 73 129 7.1E-16 T 29-03-2018 CKQ55_RS20560 b8327da49c94db06c822c7e83e87fb4b 141 Gene3D G3DSA:3.40.630.30 1 72 4.1E-17 T 29-03-2018 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 Gene3D G3DSA:1.20.1250.20 265 493 8.7E-9 T 29-03-2018 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 65 89 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 SUPERFAMILY SSF103473 5 202 3.79E-24 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 140 152 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 Pfam PF00854 POT family 77 443 1.4E-91 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 SUPERFAMILY SSF103473 203 488 3.66E-9 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 Gene3D G3DSA:1.20.1250.20 6 197 1.6E-26 T 29-03-2018 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 475 6.6E-78 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CKQ55_RS03805 4a90a1ed5ac8eb44e3b902726dd1afc4 493 Hamap MF_01880 Dipeptide permease D [dtpD]. 1 493 57.423 T 29-03-2018 IPR023777 Amino acid/peptide transporter family, dipeptide permease D GO:0005887|GO:0042938 CKQ55_RS07060 8e393310c59f21a8ac3d7be5697f2c49 429 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 361 1.4E-101 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS07060 8e393310c59f21a8ac3d7be5697f2c49 429 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 425 4.2E-131 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS07060 8e393310c59f21a8ac3d7be5697f2c49 429 PIRSF PIRSF004539 1 428 7.4E-128 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS09990 c71cebd928a053c237e0fc6223937caf 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 5.0E-74 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CKQ55_RS09990 c71cebd928a053c237e0fc6223937caf 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 1.5E-136 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 4.9E-209 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 215 2.3E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 SUPERFAMILY SSF50465 336 435 9.11E-30 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 Gene3D G3DSA:3.40.50.300 4 239 2.5E-40 T 29-03-2018 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 4.1E-44 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 Gene3D G3DSA:2.40.30.10 332 436 1.0E-18 T 29-03-2018 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 SUPERFAMILY SSF52540 24 253 5.2E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 Gene3D G3DSA:2.40.30.10 240 329 3.0E-22 T 29-03-2018 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 SUPERFAMILY SSF50447 243 327 3.53E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.555 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 8.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 8.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 8.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 8.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS18700 2d82ad9e599a8cb78414dd569ec81bb3 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 8.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CKQ55_RS27450 d8abc15608121f78dddf88ba68f0d135 598 Gene3D G3DSA:3.10.490.10 471 598 1.3E-27 T 29-03-2018 CKQ55_RS27450 d8abc15608121f78dddf88ba68f0d135 598 Pfam PF01425 Amidase 30 442 1.6E-76 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS27450 d8abc15608121f78dddf88ba68f0d135 598 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 44 597 1.6E-226 T 29-03-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CKQ55_RS27450 d8abc15608121f78dddf88ba68f0d135 598 Gene3D G3DSA:3.90.1300.10 1 455 4.5E-113 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS27450 d8abc15608121f78dddf88ba68f0d135 598 SUPERFAMILY SSF75304 6 452 6.28E-110 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 Gene3D G3DSA:3.20.20.70 1 295 6.4E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 SMART SM01130 1 293 4.7E-55 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 PIRSF PIRSF001365 1 295 2.2E-48 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 SUPERFAMILY SSF51569 1 293 8.9E-57 T 29-03-2018 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 5.6E-7 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 5.6E-7 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 5.6E-7 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS23510 1a1bdf0554fa7ac81ea314e464f6b04c 295 Pfam PF00701 Dihydrodipicolinate synthetase family 2 290 2.3E-34 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS16845 e3db40a2524c1fe1da4526e83968af6d 135 Gene3D G3DSA:2.40.50.200 22 135 2.6E-38 T 29-03-2018 CKQ55_RS16845 e3db40a2524c1fe1da4526e83968af6d 135 SUPERFAMILY SSF101756 35 132 6.93E-36 T 29-03-2018 IPR005220 Bacterial OB-fold CKQ55_RS16845 e3db40a2524c1fe1da4526e83968af6d 135 Pfam PF04076 Bacterial OB fold (BOF) protein 34 132 4.5E-40 T 29-03-2018 IPR005220 Bacterial OB-fold CKQ55_RS16845 e3db40a2524c1fe1da4526e83968af6d 135 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 133 1.3E-52 T 29-03-2018 IPR016052 Bacteriophage 933W, L0136 CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 SUPERFAMILY SSF46548 6 81 6.8E-16 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 391 4.6E-215 T 29-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 Gene3D G3DSA:3.30.70.20 4 61 6.0E-9 T 29-03-2018 CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 Pfam PF02754 Cysteine-rich domain 163 245 2.5E-15 T 29-03-2018 IPR004017 Cysteine-rich domain CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 Pfam PF02754 Cysteine-rich domain 289 372 4.1E-13 T 29-03-2018 IPR004017 Cysteine-rich domain CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 Pfam PF13183 4Fe-4S dicluster domain 6 70 1.4E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS21330 a742da0acd89c11296077fef21756867 392 Gene3D G3DSA:3.30.70.20 62 382 5.1E-4 T 29-03-2018 CKQ55_RS24370 2c7f46771d7f62e1936d3adce13dc120 330 Pfam PF00589 Phage integrase family 137 300 1.7E-20 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS24370 2c7f46771d7f62e1936d3adce13dc120 330 Gene3D G3DSA:1.10.443.10 134 316 7.7E-27 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS24370 2c7f46771d7f62e1936d3adce13dc120 330 SUPERFAMILY SSF56349 30 310 9.42E-57 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS24370 2c7f46771d7f62e1936d3adce13dc120 330 Gene3D G3DSA:1.10.150.130 20 133 3.8E-18 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS02185 c402228c8950073753ecde8db2d4916a 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 3.6E-105 T 29-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CKQ55_RS02185 c402228c8950073753ecde8db2d4916a 287 Gene3D G3DSA:1.20.1630.10 3 285 3.2E-42 T 29-03-2018 CKQ55_RS25605 5f19478b230bfa1ffc92ec2ea24b20e8 284 Pfam PF00877 NlpC/P60 family 166 276 7.8E-31 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CKQ55_RS25605 5f19478b230bfa1ffc92ec2ea24b20e8 284 SUPERFAMILY SSF54001 146 278 1.25E-42 T 29-03-2018 CKQ55_RS25605 5f19478b230bfa1ffc92ec2ea24b20e8 284 Gene3D G3DSA:3.90.1720.10 147 284 1.1E-37 T 29-03-2018 CKQ55_RS27625 aec69329c4b070c8ce60a583f9e4c15f 175 Pfam PF00583 Acetyltransferase (GNAT) family 45 143 3.4E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS27625 aec69329c4b070c8ce60a583f9e4c15f 175 Gene3D G3DSA:3.40.630.30 5 163 1.4E-25 T 29-03-2018 CKQ55_RS27625 aec69329c4b070c8ce60a583f9e4c15f 175 SUPERFAMILY SSF55729 15 150 2.92E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 Gene3D G3DSA:3.40.50.300 329 581 1.1E-79 T 29-03-2018 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 Pfam PF00664 ABC transporter transmembrane region 27 297 2.2E-59 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 Pfam PF00005 ABC transporter 359 509 2.7E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 4.7E-270 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 Gene3D G3DSA:1.20.1560.10 1 328 3.8E-68 T 29-03-2018 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 SMART SM00382 368 562 8.7E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 SUPERFAMILY SSF90123 14 325 5.23E-75 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS02090 d66d34f832c21f9372ba1ebae575384a 582 SUPERFAMILY SSF52540 331 580 1.25E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 SUPERFAMILY SSF51126 389 781 7.22E-10 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 SUPERFAMILY SSF103515 1126 1434 1.26E-45 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Pfam PF03212 Pertactin 932 1043 3.0E-10 T 29-03-2018 IPR004899 Pertactin, central region CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 SUPERFAMILY SSF51126 70 362 9.42E-9 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.9E-6 T 29-03-2018 IPR024973 ESPR domain CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 SMART SM00869 1156 1423 5.3E-42 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Pfam PF12951 Passenger-associated-transport-repeat 868 895 2.0E-9 T 29-03-2018 IPR013425 Autotransporter-associated beta strand repeat CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Pfam PF03797 Autotransporter beta-domain 1159 1410 7.0E-45 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 942 1434 6.2E-113 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 SUPERFAMILY SSF51126 818 1044 4.39E-35 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 867 895 1.1E-11 T 29-03-2018 IPR013425 Autotransporter-associated beta strand repeat CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Gene3D G3DSA:2.160.20.20 713 1049 1.6E-41 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Gene3D G3DSA:2.160.20.20 71 298 7.9E-19 T 29-03-2018 IPR012332 P22 tailspike C-terminal domain-like CKQ55_RS03135 fbe34822410728da11df2415a1bd4b83 1434 Gene3D G3DSA:2.40.128.130 1121 1434 2.2E-47 T 29-03-2018 CKQ55_RS19775 adb87652932db43ac2e4c2b2701e5fa3 169 Pfam PF13689 Domain of unknown function (DUF4154) 30 164 1.2E-30 T 29-03-2018 IPR025293 Protein of unknown function DUF4154 CKQ55_RS13935 eb1af8e03e33a7fb7ece191451d4c47c 232 SUPERFAMILY SSF53639 1 223 2.55E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS13935 eb1af8e03e33a7fb7ece191451d4c47c 232 SMART SM01007 7 198 3.5E-69 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS13935 eb1af8e03e33a7fb7ece191451d4c47c 232 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 4.7E-133 T 29-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CKQ55_RS13935 eb1af8e03e33a7fb7ece191451d4c47c 232 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 8.6E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS13935 eb1af8e03e33a7fb7ece191451d4c47c 232 Gene3D G3DSA:3.40.225.10 1 231 7.5E-60 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS31450 25c1082ff7b915934609343efd3233b7 338 Pfam PF01609 Transposase DDE domain 150 324 4.1E-32 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS31450 25c1082ff7b915934609343efd3233b7 338 Pfam PF05598 Transposase domain (DUF772) 63 136 3.8E-21 T 29-03-2018 IPR008490 Transposase InsH, N-terminal CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.9E-104 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 5.8E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 5.8E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 5.8E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 5.8E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 5.8E-46 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.586 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 Gene3D G3DSA:3.40.630.10 93 428 5.1E-113 T 29-03-2018 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 SUPERFAMILY SSF53187 107 426 3.11E-103 T 29-03-2018 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 PIRSF PIRSF036388 1 428 1.2E-233 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 Pfam PF12404 Peptidase 5 81 4.6E-31 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CKQ55_RS20155 91df8efc08c33a717cdb7624fe0762d4 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 Gene3D G3DSA:1.10.10.10 112 216 1.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 SUPERFAMILY SSF46894 141 209 1.22E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 SMART SM00421 151 208 6.3E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 9.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS08890 746202e296ad7c1a0b1a68988679d46d 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS10040 c6cfb96c190e21a3c30e304ba3d1aca5 141 PIRSF PIRSF018193 1 141 9.8E-67 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B CKQ55_RS10040 c6cfb96c190e21a3c30e304ba3d1aca5 141 Gene3D G3DSA:3.30.70.970 3 116 2.3E-43 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CKQ55_RS10040 c6cfb96c190e21a3c30e304ba3d1aca5 141 Pfam PF06877 Regulator of ribonuclease activity B 12 113 4.8E-35 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CKQ55_RS10040 c6cfb96c190e21a3c30e304ba3d1aca5 141 SUPERFAMILY SSF89946 2 123 1.7E-41 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CKQ55_RS10040 c6cfb96c190e21a3c30e304ba3d1aca5 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.476 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B CKQ55_RS18235 71e7f3184c3a4c42f38680c78bc1e93a 91 SMART SM00877 3 79 8.1E-38 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18235 71e7f3184c3a4c42f38680c78bc1e93a 91 Pfam PF00936 BMC domain 4 79 4.9E-29 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18235 71e7f3184c3a4c42f38680c78bc1e93a 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 4.0E-17 T 29-03-2018 CKQ55_RS18235 71e7f3184c3a4c42f38680c78bc1e93a 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS18235 71e7f3184c3a4c42f38680c78bc1e93a 91 SUPERFAMILY SSF143414 3 89 2.09E-32 T 29-03-2018 CKQ55_RS04290 26f994d8ac5707c0a9d953019534edec 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 319 2.9E-36 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04290 26f994d8ac5707c0a9d953019534edec 333 Gene3D G3DSA:1.10.3470.10 36 325 4.0E-30 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS13290 2fe672be5e7065b4ffcc27dcab31d7c9 337 Gene3D G3DSA:3.40.190.10 136 279 1.2E-22 T 29-03-2018 CKQ55_RS13290 2fe672be5e7065b4ffcc27dcab31d7c9 337 TIGRFAM TIGR03227 PhnS: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein 1 335 3.2E-152 T 29-03-2018 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter CKQ55_RS13290 2fe672be5e7065b4ffcc27dcab31d7c9 337 Gene3D G3DSA:3.40.190.10 20 135 7.0E-12 T 29-03-2018 CKQ55_RS13290 2fe672be5e7065b4ffcc27dcab31d7c9 337 Pfam PF13343 Bacterial extracellular solute-binding protein 76 319 5.1E-23 T 29-03-2018 CKQ55_RS13290 2fe672be5e7065b4ffcc27dcab31d7c9 337 SUPERFAMILY SSF53850 25 331 1.19E-51 T 29-03-2018 CKQ55_RS30870 8ca1eede7aa4d5209bf89133f84d6f81 324 Gene3D G3DSA:3.30.420.40 1 174 4.3E-30 T 29-03-2018 CKQ55_RS30870 8ca1eede7aa4d5209bf89133f84d6f81 324 Pfam PF06406 StbA protein 1 318 3.6E-119 T 29-03-2018 IPR009440 Plasmid segregation protein ParM/StbA CKQ55_RS30870 8ca1eede7aa4d5209bf89133f84d6f81 324 SUPERFAMILY SSF53067 1 156 7.12E-50 T 29-03-2018 CKQ55_RS30870 8ca1eede7aa4d5209bf89133f84d6f81 324 SUPERFAMILY SSF53067 165 315 1.05E-17 T 29-03-2018 CKQ55_RS30870 8ca1eede7aa4d5209bf89133f84d6f81 324 Gene3D G3DSA:3.30.420.40 175 305 4.6E-12 T 29-03-2018 CKQ55_RS23350 a01f0778a5e87a8fe917d82d91c6bbb3 265 Gene3D G3DSA:3.40.390.10 76 245 1.2E-21 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CKQ55_RS23350 a01f0778a5e87a8fe917d82d91c6bbb3 265 SUPERFAMILY SSF55486 35 245 1.25E-38 T 29-03-2018 CKQ55_RS23350 a01f0778a5e87a8fe917d82d91c6bbb3 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 24 243 1.6E-62 T 29-03-2018 IPR010384 MtfA family CKQ55_RS23350 a01f0778a5e87a8fe917d82d91c6bbb3 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 63.962 T 29-03-2018 IPR010384 MtfA family CKQ55_RS10980 45a3c6297acf85a998c4b98005d88e2f 179 Pfam PF00419 Fimbrial protein 30 178 3.9E-14 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10980 45a3c6297acf85a998c4b98005d88e2f 179 Gene3D G3DSA:2.60.40.1090 28 179 2.0E-30 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10980 45a3c6297acf85a998c4b98005d88e2f 179 SUPERFAMILY SSF49401 29 178 2.49E-28 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS09335 a7336d663805e913d52e2950ad57a201 534 Gene3D G3DSA:3.40.605.10 6 231 1.4E-31 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09335 a7336d663805e913d52e2950ad57a201 534 Pfam PF00171 Aldehyde dehydrogenase family 10 273 2.4E-28 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09335 a7336d663805e913d52e2950ad57a201 534 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 457 2.2E-215 T 29-03-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating CKQ55_RS09335 a7336d663805e913d52e2950ad57a201 534 SUPERFAMILY SSF53720 11 452 5.63E-82 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS09335 a7336d663805e913d52e2950ad57a201 534 Gene3D G3DSA:3.40.309.10 232 407 7.7E-23 T 29-03-2018 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 Pfam PF12833 Helix-turn-helix domain 35 110 1.3E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 78 93 5.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 93 109 5.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 SUPERFAMILY SSF46689 62 110 8.06E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 SUPERFAMILY SSF46689 10 60 3.09E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 Gene3D G3DSA:1.10.10.60 62 113 1.9E-9 T 29-03-2018 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 Gene3D G3DSA:1.10.10.60 4 61 6.8E-14 T 29-03-2018 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 SMART SM00342 25 109 1.1E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS11050 3770e341f62ea8f75593014922d3024a 116 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 105 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 Gene3D G3DSA:3.40.1410.10 80 240 2.5E-36 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 Pfam PF07702 UTRA domain 98 234 2.5E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 SUPERFAMILY SSF64288 64 239 3.45E-40 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 SMART SM00866 97 234 2.6E-30 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 12 240 1.9E-105 T 29-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 SUPERFAMILY SSF46785 8 99 2.73E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 6.5E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 6.5E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.5E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 SMART SM00345 17 76 9.4E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS03380 3352b6010356f9e1627c9183f6096d70 241 Gene3D G3DSA:1.10.10.10 2 79 1.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28290 1fae267973b032e72720893a2806b0d3 311 Pfam PF08223 PaaX-like protein C-terminal domain 186 283 3.0E-30 T 29-03-2018 IPR013225 PaaX-like, C-terminal CKQ55_RS28290 1fae267973b032e72720893a2806b0d3 311 PIRSF PIRSF020623 4 309 9.1E-130 T 29-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 CKQ55_RS28290 1fae267973b032e72720893a2806b0d3 311 Gene3D G3DSA:1.10.10.10 20 103 1.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28290 1fae267973b032e72720893a2806b0d3 311 Pfam PF07848 PaaX-like protein 22 90 8.9E-25 T 29-03-2018 IPR012906 PaaX-like, N-terminal CKQ55_RS28290 1fae267973b032e72720893a2806b0d3 311 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 24 306 1.2E-110 T 29-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 CKQ55_RS09635 8e490b468cd2929e489feff15eba74f7 195 SUPERFAMILY SSF46894 120 186 5.78E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS09635 8e490b468cd2929e489feff15eba74f7 195 Gene3D G3DSA:1.10.10.10 55 190 2.3E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09635 8e490b468cd2929e489feff15eba74f7 195 SMART SM00421 126 183 2.7E-4 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS09635 8e490b468cd2929e489feff15eba74f7 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 128 182 1.9E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS16250 001a04a374aa53a04d904f0751766b4d 470 SUPERFAMILY SSF52794 3 101 2.96E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS16250 001a04a374aa53a04d904f0751766b4d 470 Pfam PF02378 Phosphotransferase system, EIIC 133 398 1.5E-12 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS16250 001a04a374aa53a04d904f0751766b4d 470 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 89 2.3E-14 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS16250 001a04a374aa53a04d904f0751766b4d 470 Gene3D G3DSA:3.40.50.2300 3 99 6.3E-36 T 29-03-2018 CKQ55_RS16250 001a04a374aa53a04d904f0751766b4d 470 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 87 1.5E-29 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CKQ55_RS16250 001a04a374aa53a04d904f0751766b4d 470 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 119 453 5.4E-112 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CKQ55_RS13500 21af7c428bc5a383ddab89353f223ca6 464 Gene3D G3DSA:1.20.1250.20 216 429 3.0E-10 T 29-03-2018 CKQ55_RS13500 21af7c428bc5a383ddab89353f223ca6 464 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 8.6E-150 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS13500 21af7c428bc5a383ddab89353f223ca6 464 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 29-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CKQ55_RS13500 21af7c428bc5a383ddab89353f223ca6 464 SUPERFAMILY SSF103473 13 423 4.32E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13500 21af7c428bc5a383ddab89353f223ca6 464 Pfam PF13347 MFS/sugar transport protein 13 427 8.6E-104 T 29-03-2018 CKQ55_RS13500 21af7c428bc5a383ddab89353f223ca6 464 Gene3D G3DSA:1.20.1250.20 15 215 4.8E-15 T 29-03-2018 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 10 484 7.2E-238 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 Gene3D G3DSA:3.30.1730.10 7 170 4.5E-49 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 58.327 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 Pfam PF01048 Phosphorylase superfamily 268 431 6.9E-19 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 7.7E-51 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 SUPERFAMILY SSF53167 9 484 1.1E-156 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS23265 c6b2954b471d5290415aab290a504a9b 484 Gene3D G3DSA:3.40.50.1580 174 467 2.0E-68 T 29-03-2018 CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 Gene3D G3DSA:3.30.70.270 382 555 9.5E-50 T 29-03-2018 CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 550 4.2E-44 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 SUPERFAMILY SSF55073 396 552 1.49E-43 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 387 552 5.0E-53 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 Gene3D G3DSA:3.30.450.20 223 337 2.4E-7 T 29-03-2018 CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 Pfam PF17151 Periplasmic sensor domain 35 220 4.1E-70 T 29-03-2018 IPR033416 Periplasmic sensor domain CHASE7 CKQ55_RS23415 0ae145bd5627308c4fbeea917c5d5dc1 555 SMART SM00267 380 554 4.9E-63 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS12025 02d8334fa2220c7ee90b8f51367a797a 471 PIRSF PIRSF002744 3 469 8.9E-86 T 29-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 CKQ55_RS12025 02d8334fa2220c7ee90b8f51367a797a 471 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 26 427 1.1E-39 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 Pfam PF00455 DeoR C terminal sensor domain 75 233 6.3E-47 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 Gene3D G3DSA:1.10.10.10 1 58 2.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 6.4E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 SMART SM00420 6 58 1.4E-19 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 SMART SM01134 73 234 3.7E-62 T 29-03-2018 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 SUPERFAMILY SSF46785 4 59 5.47E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 SUPERFAMILY SSF100950 75 235 3.65E-31 T 29-03-2018 CKQ55_RS17740 f38958dbd218996c71462c1740e504f5 257 Gene3D G3DSA:3.40.50.1360 73 255 2.6E-37 T 29-03-2018 CKQ55_RS30415 4c0eee19431aee12ddc84a8d8507c32d 320 Pfam PF13289 SIR2-like domain 106 267 2.6E-15 T 29-03-2018 CKQ55_RS30415 4c0eee19431aee12ddc84a8d8507c32d 320 SUPERFAMILY SSF52467 167 274 2.07E-7 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS30415 4c0eee19431aee12ddc84a8d8507c32d 320 SUPERFAMILY SSF52467 105 119 2.07E-7 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS30415 4c0eee19431aee12ddc84a8d8507c32d 320 Gene3D G3DSA:3.40.50.1220 3 289 6.7E-4 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS21560 51052d1b84a948c569bdea9d1db472ef 587 PIRSF PIRSF028304 1 586 3.3E-161 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS21560 51052d1b84a948c569bdea9d1db472ef 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 4.9E-169 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS21560 51052d1b84a948c569bdea9d1db472ef 587 Pfam PF05947 Type VI secretion system, TssF 6 582 9.2E-186 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS00870 639aec9d5cc1b7540435a89207d3b055 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.1E-53 T 29-03-2018 IPR010835 Protein of unknown function DUF1439 CKQ55_RS28875 22e906d042c7e02baec09ff54e21f32b 128 SUPERFAMILY SSF55021 70 107 4.84E-5 T 29-03-2018 CKQ55_RS28875 22e906d042c7e02baec09ff54e21f32b 128 Gene3D G3DSA:3.30.2130.10 34 123 2.2E-4 T 29-03-2018 CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 Pfam PF13538 UvrD-like helicase C-terminal domain 537 583 1.7E-14 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 SUPERFAMILY SSF52540 285 382 1.15E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 SUPERFAMILY SSF52540 438 607 1.15E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 Gene3D G3DSA:3.40.50.300 115 359 5.8E-63 T 29-03-2018 CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 Pfam PF13604 AAA domain 158 319 2.3E-31 T 29-03-2018 CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 Gene3D G3DSA:3.40.50.300 369 597 4.5E-38 T 29-03-2018 CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 606 52.995 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 SMART SM00382 167 324 0.001 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 605 9.8E-189 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CKQ55_RS18150 6cc678412469e0caecb73156f2bee1ed 611 SUPERFAMILY SSF52540 7 364 5.86E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 Gene3D G3DSA:3.30.70.1560 145 212 1.8E-23 T 29-03-2018 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 5.1E-54 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 Gene3D G3DSA:3.30.70.580 66 144 1.2E-16 T 29-03-2018 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 Gene3D G3DSA:3.10.290.10 4 65 1.8E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 Pfam PF01479 S4 domain 8 52 5.4E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 SUPERFAMILY SSF55174 8 62 1.85E-13 T 29-03-2018 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 SUPERFAMILY SSF55120 69 229 2.64E-38 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 3.0E-15 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS11300 a2edf16384693f044f28b75bf71f23ca 290 SMART SM00363 7 63 4.5E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS30785 cc21747f69d1dd7e67081137cf55c813 168 Pfam PF07275 Antirestriction protein (ArdA) 10 166 3.4E-34 T 29-03-2018 IPR009899 Antirestriction CKQ55_RS17665 2c858be4f2d6f31bb21ff8e78d81df81 391 PIRSF PIRSF006078 1 382 3.3E-122 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS17665 2c858be4f2d6f31bb21ff8e78d81df81 391 SUPERFAMILY SSF110738 1 377 1.07E-113 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS17665 2c858be4f2d6f31bb21ff8e78d81df81 391 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 377 2.8E-130 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS17665 2c858be4f2d6f31bb21ff8e78d81df81 391 Pfam PF02595 Glycerate kinase family 3 377 3.1E-127 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CKQ55_RS17665 2c858be4f2d6f31bb21ff8e78d81df81 391 Gene3D G3DSA:3.90.1510.10 42 280 9.8E-81 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 Gene3D G3DSA:3.40.630.10 1 181 1.1E-28 T 29-03-2018 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 3.0E-168 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 SUPERFAMILY SSF55031 181 294 3.74E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 67.087 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 SUPERFAMILY SSF53187 305 381 3.43E-58 T 29-03-2018 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 SUPERFAMILY SSF53187 5 180 3.43E-58 T 29-03-2018 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 Pfam PF07687 Peptidase dimerisation domain 178 288 6.2E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 Gene3D G3DSA:3.30.70.360 182 299 4.5E-22 T 29-03-2018 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CKQ55_RS12210 e477c951534eec9b105eca75800319d9 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 1.8E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS18120 58f6f2f57b955d2cb90ff11fcfc12266 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 2.6E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS18120 58f6f2f57b955d2cb90ff11fcfc12266 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS18120 58f6f2f57b955d2cb90ff11fcfc12266 187 PIRSF PIRSF004525 1 187 2.4E-54 T 29-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CKQ55_RS18120 58f6f2f57b955d2cb90ff11fcfc12266 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 9.7E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS23385 d6833853f5f15639c0844fee611acf11 231 SMART SM00471 22 141 7.4E-10 T 29-03-2018 IPR003607 HD/PDEase domain CKQ55_RS23385 d6833853f5f15639c0844fee611acf11 231 Gene3D G3DSA:1.10.3210.10 5 215 2.9E-17 T 29-03-2018 CKQ55_RS23385 d6833853f5f15639c0844fee611acf11 231 SUPERFAMILY SSF109604 1 215 1.0E-59 T 29-03-2018 CKQ55_RS23385 d6833853f5f15639c0844fee611acf11 231 Pfam PF01966 HD domain 27 131 4.5E-13 T 29-03-2018 IPR006674 HD domain CKQ55_RS14305 602bfe6e4b7e0c2551ee954bc73f2d82 501 Gene3D G3DSA:3.30.830.10 256 471 6.7E-26 T 29-03-2018 CKQ55_RS14305 602bfe6e4b7e0c2551ee954bc73f2d82 501 Gene3D G3DSA:3.30.830.10 16 250 1.9E-23 T 29-03-2018 CKQ55_RS14305 602bfe6e4b7e0c2551ee954bc73f2d82 501 SUPERFAMILY SSF63411 29 239 1.92E-20 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS14305 602bfe6e4b7e0c2551ee954bc73f2d82 501 Pfam PF05193 Peptidase M16 inactive domain 201 377 2.2E-16 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CKQ55_RS14305 602bfe6e4b7e0c2551ee954bc73f2d82 501 SUPERFAMILY SSF63411 317 462 7.16E-8 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CKQ55_RS01545 b1cf7916f5535cfa688d729aafbe704a 300 SUPERFAMILY SSF56529 63 277 6.54E-66 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS01545 b1cf7916f5535cfa688d729aafbe704a 300 Gene3D G3DSA:3.90.850.10 32 285 3.8E-62 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS01545 b1cf7916f5535cfa688d729aafbe704a 300 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 275 3.5E-52 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS08230 5b57158dfdd54791d66dcbadded44945 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 5.1E-99 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CKQ55_RS08230 5b57158dfdd54791d66dcbadded44945 201 Pfam PF00694 Aconitase C-terminal domain 3 126 8.7E-40 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CKQ55_RS08230 5b57158dfdd54791d66dcbadded44945 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 45.075 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CKQ55_RS08230 5b57158dfdd54791d66dcbadded44945 201 SUPERFAMILY SSF52016 3 195 1.69E-61 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS08230 5b57158dfdd54791d66dcbadded44945 201 Gene3D G3DSA:3.20.19.10 1 177 2.9E-51 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS09915 845407d2b0e8b538f7cd7418e3ff0c48 295 Gene3D G3DSA:1.10.3720.10 21 283 3.6E-36 T 29-03-2018 CKQ55_RS09915 845407d2b0e8b538f7cd7418e3ff0c48 295 SUPERFAMILY SSF161098 27 295 2.99E-59 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09915 845407d2b0e8b538f7cd7418e3ff0c48 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 281 2.9E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14105 e00eed23a473f85a8cc6dd0ef3b4f8fe 249 Gene3D G3DSA:3.20.20.150 1 248 1.1E-28 T 29-03-2018 CKQ55_RS14105 e00eed23a473f85a8cc6dd0ef3b4f8fe 249 SUPERFAMILY SSF51658 4 248 2.82E-59 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 Gene3D G3DSA:3.50.50.60 480 626 1.1E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 Gene3D G3DSA:3.40.50.720 371 479 5.7E-21 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 Gene3D G3DSA:3.50.50.60 629 672 0.034 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 2.6E-11 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 2.6E-11 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.6E-11 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 SUPERFAMILY SSF51905 461 519 7.78E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 SUPERFAMILY SSF51905 557 651 7.78E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 2.3E-5 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 2.3E-5 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 SUPERFAMILY SSF51971 334 520 3.77E-41 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 649 2.2E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 332 5.8E-96 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 SUPERFAMILY SSF51395 3 363 5.36E-108 T 29-03-2018 CKQ55_RS16435 62014c368dbd419c5a6b03697f510573 673 Gene3D G3DSA:3.20.20.70 3 370 6.3E-109 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 SUPERFAMILY SSF51338 349 381 7.34E-5 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 Gene3D G3DSA:2.30.40.10 2 68 2.4E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 Gene3D G3DSA:2.30.40.10 330 368 3.0E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 Gene3D G3DSA:3.20.20.140 69 329 8.9E-91 T 29-03-2018 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 Pfam PF01979 Amidohydrolase family 50 379 1.2E-44 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 SUPERFAMILY SSF51338 1 53 1.56E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 SUPERFAMILY SSF51556 54 350 3.72E-101 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.8E-173 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CKQ55_RS03980 cfcee643c4615ac7dfc09528ccdb5aa3 382 PIRSF PIRSF038994 1 382 3.1E-115 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CKQ55_RS03580 c04922ab593b74c2da631bbace753a85 440 Pfam PF06519 TolA C-terminal 346 438 1.9E-34 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CKQ55_RS03580 c04922ab593b74c2da631bbace753a85 440 SUPERFAMILY SSF74653 353 440 2.16E-19 T 29-03-2018 CKQ55_RS03580 c04922ab593b74c2da631bbace753a85 440 Gene3D G3DSA:3.30.1150.10 363 435 5.8E-19 T 29-03-2018 CKQ55_RS03580 c04922ab593b74c2da631bbace753a85 440 TIGRFAM TIGR02794 tolA_full: protein TolA 210 439 9.8E-46 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CKQ55_RS03580 c04922ab593b74c2da631bbace753a85 440 TIGRFAM TIGR02794 tolA_full: protein TolA 12 242 6.7E-43 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 Gene3D G3DSA:3.40.50.2300 55 171 3.3E-27 T 29-03-2018 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 7.9E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 7.9E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 SUPERFAMILY SSF47413 2 58 2.53E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 6.4E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 SMART SM00354 1 70 5.6E-27 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 Gene3D G3DSA:3.40.50.2300 172 305 2.4E-45 T 29-03-2018 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 Gene3D G3DSA:1.10.260.40 1 54 5.2E-23 T 29-03-2018 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 Pfam PF13377 Periplasmic binding protein-like domain 166 325 2.1E-39 T 29-03-2018 CKQ55_RS04920 953f5306035ae98986c16d27a1f74de9 326 SUPERFAMILY SSF53822 60 325 4.38E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 Gene3D G3DSA:1.10.10.10 5 88 1.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 64 1.8E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 Gene3D G3DSA:3.40.190.10 89 178 3.3E-14 T 29-03-2018 CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 Pfam PF03466 LysR substrate binding domain 90 294 7.4E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 SUPERFAMILY SSF46785 8 105 4.22E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 SUPERFAMILY SSF53850 92 301 1.32E-31 T 29-03-2018 CKQ55_RS01375 522bebe5db944db08a53feea5110230b 315 Gene3D G3DSA:3.40.190.10 179 269 1.1E-16 T 29-03-2018 CKQ55_RS30590 dc708fda27558ff75c220f32c91ace7e 879 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 45 855 4.7E-263 T 29-03-2018 IPR014117 Type-IV secretion system protein TraC CKQ55_RS30590 dc708fda27558ff75c220f32c91ace7e 879 SUPERFAMILY SSF52540 444 771 1.29E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30590 dc708fda27558ff75c220f32c91ace7e 879 Gene3D G3DSA:3.40.50.300 317 800 1.6E-14 T 29-03-2018 CKQ55_RS30590 dc708fda27558ff75c220f32c91ace7e 879 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 39 278 1.1E-48 T 29-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CKQ55_RS18960 3a96d2a19af71c3b10f710e789b08fc0 272 Gene3D G3DSA:3.40.50.1980 126 268 4.4E-24 T 29-03-2018 CKQ55_RS18960 3a96d2a19af71c3b10f710e789b08fc0 272 SUPERFAMILY SSF53807 19 266 2.75E-49 T 29-03-2018 CKQ55_RS18960 3a96d2a19af71c3b10f710e789b08fc0 272 Gene3D G3DSA:3.40.50.1980 18 125 2.9E-22 T 29-03-2018 CKQ55_RS18960 3a96d2a19af71c3b10f710e789b08fc0 272 Pfam PF01497 Periplasmic binding protein 22 247 5.4E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 SUPERFAMILY SSF117987 83 212 2.33E-29 T 29-03-2018 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 Pfam PF08798 CRISPR associated protein 2 212 4.6E-47 T 29-03-2018 IPR010179 CRISPR-associated protein Cse3 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 Gene3D G3DSA:3.30.70.1200 1 80 1.6E-14 T 29-03-2018 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 Gene3D G3DSA:3.30.70.1210 82 212 4.0E-31 T 29-03-2018 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 2 212 3.3E-72 T 29-03-2018 IPR010179 CRISPR-associated protein Cse3 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 SMART SM01101 1 212 3.2E-82 T 29-03-2018 IPR010179 CRISPR-associated protein Cse3 CKQ55_RS18670 e0894fbf0ad75e7dc7ae38b564593b7e 214 SUPERFAMILY SSF117987 2 73 3.14E-7 T 29-03-2018 CKQ55_RS11400 6016737150c142522b5354ee8aa09a16 145 Gene3D G3DSA:3.40.630.30 1 144 8.3E-28 T 29-03-2018 CKQ55_RS11400 6016737150c142522b5354ee8aa09a16 145 Pfam PF13673 Acetyltransferase (GNAT) domain 47 132 4.1E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS11400 6016737150c142522b5354ee8aa09a16 145 SUPERFAMILY SSF55729 3 139 1.42E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS06615 780ce28f7c0090b6f46ce6feae8fdab3 67 Pfam PF10953 Protein of unknown function (DUF2754) 1 65 4.8E-43 T 29-03-2018 IPR020490 Uncharacterised protein family YaiZ CKQ55_RS06615 780ce28f7c0090b6f46ce6feae8fdab3 67 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 65 2.0E-23 T 29-03-2018 IPR020490 Uncharacterised protein family YaiZ CKQ55_RS23695 02cffa5bc63439a75aa6782e6fd18ade 250 SMART SM00382 29 199 6.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS23695 02cffa5bc63439a75aa6782e6fd18ade 250 SUPERFAMILY SSF52540 4 212 5.25E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23695 02cffa5bc63439a75aa6782e6fd18ade 250 Pfam PF00005 ABC transporter 20 149 1.4E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS23695 02cffa5bc63439a75aa6782e6fd18ade 250 Gene3D G3DSA:3.40.50.300 1 237 1.3E-53 T 29-03-2018 CKQ55_RS25650 1ad37be2c16f1cb55a9e186a746764cf 674 Pfam PF04632 Fusaric acid resistance protein family 20 663 5.0E-172 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CKQ55_RS25650 1ad37be2c16f1cb55a9e186a746764cf 674 Gene3D G3DSA:1.25.10.10 149 670 9.3E-4 T 29-03-2018 IPR011989 Armadillo-like helical CKQ55_RS06225 65d510398b42a30626f0e6ff225a224a 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 1.7E-7 T 29-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site CKQ55_RS06225 65d510398b42a30626f0e6ff225a224a 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 1.1E-52 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG CKQ55_RS01940 fb8824a2fd2873fb1bcebbb7ffd8b225 545 Pfam PF02470 MlaD protein 157 222 7.3E-8 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS01940 fb8824a2fd2873fb1bcebbb7ffd8b225 545 Pfam PF02470 MlaD protein 285 389 5.8E-15 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS01940 fb8824a2fd2873fb1bcebbb7ffd8b225 545 Pfam PF02470 MlaD protein 42 133 9.1E-9 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS01940 fb8824a2fd2873fb1bcebbb7ffd8b225 545 Gene3D G3DSA:1.20.120.570 406 535 9.5E-5 T 29-03-2018 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 6.3E-117 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.191 T 29-03-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 PIRSF PIRSF036979 13 304 7.1E-101 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 Gene3D G3DSA:3.40.800.10 4 306 7.9E-93 T 29-03-2018 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 Pfam PF00491 Arginase family 34 297 7.6E-86 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CKQ55_RS17205 91c2a8414a5fdf2f7689d55a7a65904a 306 SUPERFAMILY SSF52768 13 301 3.42E-91 T 29-03-2018 CKQ55_RS02960 e428b98f5c59b94d2ba28458a12c568b 371 SUPERFAMILY SSF50952 21 370 1.03E-46 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CKQ55_RS02960 e428b98f5c59b94d2ba28458a12c568b 371 Gene3D G3DSA:2.120.10.30 16 272 9.8E-50 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CKQ55_RS02960 e428b98f5c59b94d2ba28458a12c568b 371 Gene3D G3DSA:2.120.10.30 273 363 6.6E-16 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CKQ55_RS02960 e428b98f5c59b94d2ba28458a12c568b 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 5.2E-134 T 29-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase CKQ55_RS21115 f0fd0eba1c728712c9add1af26dd699d 148 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 2.1E-31 T 29-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21115 f0fd0eba1c728712c9add1af26dd699d 148 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.994 T 29-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CKQ55_RS18515 5cd6575dd86e09c82927a57663d96427 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 1.7E-182 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS21990 312e0329d43999c57109bb4121febc83 447 Pfam PF00860 Permease family 31 392 8.4E-29 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS26535 e97de3a9d3a24e03b663be4a68218cf6 124 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 1.0E-49 T 29-03-2018 IPR020378 Protein of unknown function DUF4186 CKQ55_RS26535 e97de3a9d3a24e03b663be4a68218cf6 124 Pfam PF13811 Domain of unknown function (DUF4186) 6 112 3.5E-52 T 29-03-2018 IPR020378 Protein of unknown function DUF4186 CKQ55_RS04435 42521e8638db708f1e7068c8a3707372 391 SUPERFAMILY SSF56322 22 389 8.24E-83 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS04435 42521e8638db708f1e7068c8a3707372 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 111 387 1.9E-82 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CKQ55_RS04435 42521e8638db708f1e7068c8a3707372 391 Gene3D G3DSA:3.60.120.10 1 391 1.1E-98 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS04435 42521e8638db708f1e7068c8a3707372 391 Pfam PF00425 chorismate binding enzyme 126 380 1.4E-67 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CKQ55_RS09930 ecacfea85d23b0cefe49c4265512cf67 436 Gene3D G3DSA:3.40.190.10 143 431 7.7E-49 T 29-03-2018 CKQ55_RS09930 ecacfea85d23b0cefe49c4265512cf67 436 Pfam PF13416 Bacterial extracellular solute-binding protein 45 360 6.5E-42 T 29-03-2018 CKQ55_RS09930 ecacfea85d23b0cefe49c4265512cf67 436 SUPERFAMILY SSF53850 35 420 4.62E-76 T 29-03-2018 CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 SUPERFAMILY SSF54292 3 79 4.98E-23 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 Gene3D G3DSA:1.10.150.120 76 152 1.3E-30 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 Pfam PF01799 [2Fe-2S] binding domain 74 146 6.4E-28 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 SUPERFAMILY SSF47741 85 151 1.83E-29 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 Gene3D G3DSA:3.10.20.30 1 75 4.5E-25 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS24280 a688b709f353b3bdfba21b2c81ca75bc 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 57 3.0E-5 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS30850 703c832d489e090823ac452039824ca3 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 7.9E-15 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CKQ55_RS30850 703c832d489e090823ac452039824ca3 95 Gene3D G3DSA:3.30.2310.20 1 95 2.4E-25 T 29-03-2018 CKQ55_RS30850 703c832d489e090823ac452039824ca3 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 86 8.8E-10 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CKQ55_RS30850 703c832d489e090823ac452039824ca3 95 SUPERFAMILY SSF143011 1 82 1.05E-22 T 29-03-2018 IPR035095 Toxin RelE-like domain CKQ55_RS18605 355a03cfbaed53aac86ac65621b0dee6 369 SUPERFAMILY SSF51735 2 288 7.86E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18605 355a03cfbaed53aac86ac65621b0dee6 369 SUPERFAMILY SSF51735 318 353 7.86E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18605 355a03cfbaed53aac86ac65621b0dee6 369 Gene3D G3DSA:3.40.50.720 1 362 2.1E-31 T 29-03-2018 CKQ55_RS18605 355a03cfbaed53aac86ac65621b0dee6 369 Pfam PF07993 Male sterility protein 6 237 4.9E-34 T 29-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 CKQ55_RS04895 bdc9be7a0c78d956c43958dc46f3994d 131 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 19 122 3.9E-34 T 29-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CKQ55_RS04895 bdc9be7a0c78d956c43958dc46f3994d 131 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 38 115 0.003 T 29-03-2018 CKQ55_RS04895 bdc9be7a0c78d956c43958dc46f3994d 131 TIGRFAM TIGR01004 PulS_OutS: lipoprotein, PulS/OutS family 7 125 1.9E-45 T 29-03-2018 IPR005699 Chaperone lipoprotein, PulS/OutS GO:0006886|GO:0008565 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 SUPERFAMILY SSF55174 33 84 2.22E-9 T 29-03-2018 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 Pfam PF01479 S4 domain 34 80 7.0E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 SMART SM00363 34 92 1.8E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 Gene3D G3DSA:3.30.2350.10 106 331 5.2E-70 T 29-03-2018 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 154 168 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 Pfam PF00849 RNA pseudouridylate synthase 115 263 1.4E-30 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 Gene3D G3DSA:3.10.290.10 22 94 4.0E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 SUPERFAMILY SSF55120 109 328 5.44E-67 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS00815 79703b87dcf53bccf39393de4c5ce359 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 30 328 8.6E-101 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS07910 4fa1ba469c273c729118deca034c208e 308 SMART SM00382 30 213 2.7E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS07910 4fa1ba469c273c729118deca034c208e 308 SUPERFAMILY SSF52540 3 232 4.6E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS07910 4fa1ba469c273c729118deca034c208e 308 Pfam PF00005 ABC transporter 21 165 3.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS07910 4fa1ba469c273c729118deca034c208e 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS07910 4fa1ba469c273c729118deca034c208e 308 Gene3D G3DSA:3.40.50.300 1 243 1.1E-64 T 29-03-2018 CKQ55_RS03520 ae8737df3c6a0c0a8df901fe92eac189 314 SUPERFAMILY SSF161111 16 214 2.48E-60 T 29-03-2018 CKQ55_RS03520 ae8737df3c6a0c0a8df901fe92eac189 314 Gene3D G3DSA:1.20.1510.10 17 213 9.3E-62 T 29-03-2018 CKQ55_RS03520 ae8737df3c6a0c0a8df901fe92eac189 314 Pfam PF01545 Cation efflux family 21 213 4.3E-50 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS03520 ae8737df3c6a0c0a8df901fe92eac189 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 1.1E-96 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS03520 ae8737df3c6a0c0a8df901fe92eac189 314 Gene3D G3DSA:3.30.70.1350 215 293 8.7E-12 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CKQ55_RS03520 ae8737df3c6a0c0a8df901fe92eac189 314 SUPERFAMILY SSF160240 224 292 2.22E-9 T 29-03-2018 CKQ55_RS05700 7b229831441479ac4c016eb3eafbfe60 52 Gene3D G3DSA:1.10.1660.20 7 49 4.2E-6 T 29-03-2018 CKQ55_RS05700 7b229831441479ac4c016eb3eafbfe60 52 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 47 6.1E-10 T 29-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CKQ55_RS05700 7b229831441479ac4c016eb3eafbfe60 52 Pfam PF12728 Helix-turn-helix domain 8 43 1.2E-7 T 29-03-2018 CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 9.4E-27 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 303 6.7E-20 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 SMART SM00382 44 236 6.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 SUPERFAMILY SSF52540 9 257 8.54E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 Gene3D G3DSA:3.40.50.300 7 330 3.6E-74 T 29-03-2018 CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS22510 2c4ffad767344558b083fa840a870323 345 Pfam PF00005 ABC transporter 36 186 5.7E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS07315 59fccad72fcafcbae96dc8c2a7a9289a 412 PIRSF PIRSF016055 1 412 5.7E-198 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS07315 59fccad72fcafcbae96dc8c2a7a9289a 412 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.994 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS07315 59fccad72fcafcbae96dc8c2a7a9289a 412 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 2.4E-107 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CKQ55_RS07315 59fccad72fcafcbae96dc8c2a7a9289a 412 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 2.7E-192 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS11245 84f2d3a844bd5d9b12c4b81226f7934f 169 Pfam PF00583 Acetyltransferase (GNAT) family 33 145 1.8E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS11245 84f2d3a844bd5d9b12c4b81226f7934f 169 Gene3D G3DSA:3.40.630.30 1 169 5.4E-28 T 29-03-2018 CKQ55_RS11245 84f2d3a844bd5d9b12c4b81226f7934f 169 SUPERFAMILY SSF55729 1 149 1.49E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS13895 2d35e39d0627408cc11f87eff8de43c7 123 Pfam PF11742 Protein of unknown function (DUF3302) 3 79 4.0E-41 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CKQ55_RS13895 2d35e39d0627408cc11f87eff8de43c7 123 PIRSF PIRSF028770 1 122 3.5E-60 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CKQ55_RS20815 1687ba64f9236a4fe7aed4261d30e58d 111 Pfam PF07007 Lysozyme inhibitor LprI 25 100 1.7E-4 T 29-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CKQ55_RS20815 1687ba64f9236a4fe7aed4261d30e58d 111 PIRSF PIRSF037256 1 111 1.0E-45 T 29-03-2018 IPR017160 Uncharacterised conserved protein UCP037256 CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 Pfam PF00482 Type II secretion system (T2SS), protein F 67 189 9.1E-31 T 29-03-2018 IPR018076 Type II secretion system F domain CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 1.0E-24 T 29-03-2018 IPR018076 Type II secretion system F domain CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 7.1E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 7.1E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 7.1E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 161 189 7.1E-42 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 398 6.4E-154 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CKQ55_RS07760 b44ea00315569550692ec481568b2bf4 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 161 189 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 SUPERFAMILY SSF52440 2 122 1.24E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 6.5E-140 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 Gene3D G3DSA:3.30.470.20 192 300 6.8E-16 T 29-03-2018 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 6.7E-79 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 Gene3D G3DSA:3.40.50.20 2 129 4.5E-53 T 29-03-2018 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.1E-47 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 SUPERFAMILY SSF56059 123 312 4.42E-61 T 29-03-2018 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 182.513 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CKQ55_RS17160 ccf06b58ba637f1b477d64f9bc7f5693 315 Gene3D G3DSA:3.30.1490.20 138 191 2.5E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 Gene3D G3DSA:3.30.360.10 160 315 9.9E-60 T 29-03-2018 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 SUPERFAMILY SSF51735 3 166 4.18E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 Gene3D G3DSA:3.40.50.720 1 159 6.2E-71 T 29-03-2018 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 SMART SM00846 2 150 3.6E-81 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 6.9E-133 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 PIRSF PIRSF000149 1 332 1.7E-119 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.5E-34 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.6E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.6E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 1.6E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.6E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-33 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 SUPERFAMILY SSF55347 150 314 2.62E-61 T 29-03-2018 CKQ55_RS28220 51d4a794cf08f6b483a93890e6d55ee1 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 1.6E-60 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CKQ55_RS22525 166defce2a0ae462fb76da4f96ded1fa 205 SMART SM00421 141 198 0.0036 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS22525 166defce2a0ae462fb76da4f96ded1fa 205 SUPERFAMILY SSF46894 135 197 6.8E-8 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 1.1E-232 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Gene3D G3DSA:1.10.8.10 122 200 1.3E-29 T 29-03-2018 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 SMART SM01086 336 432 4.4E-24 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 SUPERFAMILY SSF52540 3 442 1.02E-93 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Gene3D G3DSA:3.40.50.300 46 121 3.4E-5 T 29-03-2018 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 406 2.6E-6 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Gene3D G3DSA:1.10.8.10 201 231 1.2E-17 T 29-03-2018 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 43.487 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 SMART SM00382 49 333 2.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Gene3D G3DSA:1.10.8.60 336 432 2.3E-29 T 29-03-2018 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Gene3D G3DSA:1.10.8.10 232 243 0.021 T 29-03-2018 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 330 5.0E-42 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS12300 c5fad723a7169c5efe1c6aea61cc972b 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 3.2E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 Gene3D G3DSA:1.10.275.10 2 198 9.0E-71 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 Pfam PF00221 Aromatic amino acid lyase 11 472 3.9E-184 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 504 3.3E-216 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 505 44.641 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 Gene3D G3DSA:1.20.200.10 200 505 1.8E-117 T 29-03-2018 CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 SUPERFAMILY SSF48557 5 504 1.1E-187 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS03370 0e650a9fa5e974a1d7fa9ac8a03c73a7 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 29-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CKQ55_RS06725 12cfc7c85abce1fdc6ffabe68a63ad9f 459 TIGRFAM TIGR00908 2A0305: ethanolamine permease 6 450 7.0E-184 T 29-03-2018 IPR004757 Ethanolamine permease CKQ55_RS06725 12cfc7c85abce1fdc6ffabe68a63ad9f 459 Pfam PF13520 Amino acid permease 13 420 2.3E-41 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS06725 12cfc7c85abce1fdc6ffabe68a63ad9f 459 PIRSF PIRSF006060 1 455 1.8E-69 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS16150 dae8db538f2dc0ed20c3ee3fd36137b4 174 Gene3D G3DSA:3.30.1050.10 24 140 3.2E-16 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS16150 dae8db538f2dc0ed20c3ee3fd36137b4 174 Pfam PF02036 SCP-2 sterol transfer family 44 133 2.7E-17 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS16150 dae8db538f2dc0ed20c3ee3fd36137b4 174 SUPERFAMILY SSF55718 42 137 2.59E-21 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS16150 dae8db538f2dc0ed20c3ee3fd36137b4 174 PIRSF PIRSF025550 1 173 1.3E-77 T 29-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 6.2E-65 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.4E-7 T 29-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 93 108 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 56 73 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 173 189 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 197 212 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 241 259 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 125 139 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 16 32 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 PRINTS PR01714 Ferric iron reductase signature 215 231 2.8E-60 T 29-03-2018 IPR008090 Ferric iron reductase CKQ55_RS08870 bf3a574b09e632e5f3d62065b359924e 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 238 5.6E-29 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain CKQ55_RS22595 29494bea040657b198746537a331df23 378 Gene3D G3DSA:1.20.5.70 345 374 1.6E-17 T 29-03-2018 CKQ55_RS22595 29494bea040657b198746537a331df23 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 165 2.2E-28 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CKQ55_RS22595 29494bea040657b198746537a331df23 378 Pfam PF10531 SLBB domain 173 220 2.8E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS22595 29494bea040657b198746537a331df23 378 Pfam PF10531 SLBB domain 256 309 0.0042 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS22595 29494bea040657b198746537a331df23 378 Gene3D G3DSA:3.30.1950.10 89 160 2.0E-26 T 29-03-2018 CKQ55_RS22595 29494bea040657b198746537a331df23 378 Gene3D G3DSA:3.10.560.10 252 344 6.7E-18 T 29-03-2018 CKQ55_RS22595 29494bea040657b198746537a331df23 378 Gene3D G3DSA:3.10.560.10 161 251 1.4E-24 T 29-03-2018 CKQ55_RS11805 f8f54a4b65179b1dd56151fd35acc406 98 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 6 96 1.0E-14 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS11805 f8f54a4b65179b1dd56151fd35acc406 98 Gene3D G3DSA:1.10.10.60 44 95 1.1E-8 T 29-03-2018 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 Gene3D G3DSA:1.10.260.40 3 53 1.4E-17 T 29-03-2018 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 SUPERFAMILY SSF53822 62 317 7.66E-42 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 SMART SM00354 1 73 7.2E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 319 4.5E-49 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 Gene3D G3DSA:3.40.50.2300 54 175 5.6E-19 T 29-03-2018 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.0E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 SUPERFAMILY SSF47413 1 56 1.94E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS17920 bee568fb992e56e02c419dd6472fcbce 331 Gene3D G3DSA:3.40.50.2300 176 313 4.0E-31 T 29-03-2018 CKQ55_RS18545 61d7a5c8a69836175756c9819339cd21 147 Pfam PF00258 Flavodoxin 6 130 2.2E-22 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS18545 61d7a5c8a69836175756c9819339cd21 147 PRINTS PR00369 Flavodoxin signature 82 92 1.2E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18545 61d7a5c8a69836175756c9819339cd21 147 PRINTS PR00369 Flavodoxin signature 53 64 1.2E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18545 61d7a5c8a69836175756c9819339cd21 147 PRINTS PR00369 Flavodoxin signature 106 125 1.2E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CKQ55_RS18545 61d7a5c8a69836175756c9819339cd21 147 SUPERFAMILY SSF52218 1 146 1.34E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS18545 61d7a5c8a69836175756c9819339cd21 147 Gene3D G3DSA:3.40.50.360 1 147 2.4E-28 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS10905 9190173a18650d691e2782e78c0b3dee 326 Gene3D G3DSA:1.10.3470.10 46 323 2.5E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS10905 9190173a18650d691e2782e78c0b3dee 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 3.3E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26110 35b11fe9a188acde7d62a5bb89b15b0d 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 33.55 T 29-03-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 CKQ55_RS26110 35b11fe9a188acde7d62a5bb89b15b0d 109 SUPERFAMILY SSF103481 12 108 3.27E-16 T 29-03-2018 CKQ55_RS26110 35b11fe9a188acde7d62a5bb89b15b0d 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 4.5E-27 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CKQ55_RS08040 6f2b84ddb947241caa7e425d2d5be607 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 3.5E-160 T 29-03-2018 IPR031347 Protein AmpE CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 SUPERFAMILY SSF53187 10 182 4.37E-64 T 29-03-2018 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 SUPERFAMILY SSF53187 397 481 4.37E-64 T 29-03-2018 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 2.9E-20 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 Gene3D G3DSA:3.40.630.10 5 483 9.6E-50 T 29-03-2018 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PIRSF PIRSF016599 1 485 2.6E-211 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 2.3E-182 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.8E-102 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CKQ55_RS07270 9786a27d0ddb97a417372ab18347c233 485 Pfam PF07687 Peptidase dimerisation domain 203 293 1.3E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 8.7E-77 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 SUPERFAMILY SSF161111 8 207 1.7E-50 T 29-03-2018 CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.7E-25 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 Pfam PF01545 Cation efflux family 14 206 3.9E-46 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 Gene3D G3DSA:1.20.1510.10 8 206 2.5E-40 T 29-03-2018 CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 Gene3D G3DSA:3.30.70.1350 207 290 3.5E-24 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 SUPERFAMILY SSF160240 209 288 3.4E-25 T 29-03-2018 CKQ55_RS12320 c383a4d4b8d89469436a65c31d16f609 298 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 298 62.191 T 29-03-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 CKQ55_RS31590 554eb93042925d3bb35a9f48133f07e4 214 Pfam PF01464 Transglycosylase SLT domain 11 142 2.6E-15 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS31590 554eb93042925d3bb35a9f48133f07e4 214 Gene3D G3DSA:1.10.530.10 4 193 4.8E-15 T 29-03-2018 CKQ55_RS31590 554eb93042925d3bb35a9f48133f07e4 214 SUPERFAMILY SSF53955 73 136 2.21E-13 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS31590 554eb93042925d3bb35a9f48133f07e4 214 SUPERFAMILY SSF53955 16 39 2.21E-13 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS05665 1aeb0dd36936e5ed07377cda67af6159 207 Gene3D G3DSA:3.90.320.10 6 205 2.8E-33 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CKQ55_RS05665 1aeb0dd36936e5ed07377cda67af6159 207 Pfam PF09588 YqaJ-like viral recombinase domain 12 150 1.5E-13 T 29-03-2018 IPR019080 YqaJ viral recombinase CKQ55_RS05665 1aeb0dd36936e5ed07377cda67af6159 207 SUPERFAMILY SSF52980 2 198 1.98E-31 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 SUPERFAMILY SSF56784 2 185 2.31E-54 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 PIRSF PIRSF004682 1 188 9.4E-68 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 3.1E-38 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 Gene3D G3DSA:3.40.50.1000 4 188 1.4E-33 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 151 5.0E-40 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 6.9E-100 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CKQ55_RS07445 d51691d495bcdf5a80eecb216080ea6d 188 Pfam PF13242 HAD-hyrolase-like 109 179 3.6E-12 T 29-03-2018 CKQ55_RS01095 673b0da4f66aa4ece5a81bbbf17859fc 236 Pfam PF00857 Isochorismatase family 18 215 1.1E-39 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS01095 673b0da4f66aa4ece5a81bbbf17859fc 236 SUPERFAMILY SSF52499 3 227 2.35E-56 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS01095 673b0da4f66aa4ece5a81bbbf17859fc 236 Gene3D G3DSA:3.40.50.850 5 234 1.2E-50 T 29-03-2018 CKQ55_RS01095 673b0da4f66aa4ece5a81bbbf17859fc 236 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 228 61.382 T 29-03-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 CKQ55_RS01095 673b0da4f66aa4ece5a81bbbf17859fc 236 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 3 226 6.1E-134 T 29-03-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 SUPERFAMILY SSF53686 1 425 3.93E-132 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 370 2.1E-24 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 Pfam PF14821 Threonine synthase N terminus 8 80 3.3E-12 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 Gene3D G3DSA:3.40.50.1100 198 320 9.4E-42 T 29-03-2018 CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 Gene3D G3DSA:3.40.50.1100 322 394 1.4E-12 T 29-03-2018 CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 Gene3D G3DSA:3.90.1380.10 1 81 2.7E-17 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 396 3.7E-125 T 29-03-2018 IPR004450 Threonine synthase-like CKQ55_RS08660 3b602db617192fdb5b95269bdbbc5b1f 426 Gene3D G3DSA:3.40.50.1100 101 197 3.2E-18 T 29-03-2018 CKQ55_RS17620 28b7737a33dbad8c64cc3fa2f72a5180 400 SUPERFAMILY SSF103473 11 395 2.49E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17620 28b7737a33dbad8c64cc3fa2f72a5180 400 Gene3D G3DSA:1.20.1250.20 18 204 9.9E-31 T 29-03-2018 CKQ55_RS17620 28b7737a33dbad8c64cc3fa2f72a5180 400 Pfam PF07690 Major Facilitator Superfamily 27 363 3.6E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS17620 28b7737a33dbad8c64cc3fa2f72a5180 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 396 3.5E-88 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CKQ55_RS17620 28b7737a33dbad8c64cc3fa2f72a5180 400 Gene3D G3DSA:1.20.1250.20 205 399 9.2E-15 T 29-03-2018 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 Gene3D G3DSA:3.30.420.40 1 246 7.5E-77 T 29-03-2018 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 SUPERFAMILY SSF53067 251 485 6.48E-45 T 29-03-2018 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 Gene3D G3DSA:3.30.420.40 247 499 4.3E-48 T 29-03-2018 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 PIRSF PIRSF000538 2 495 3.3E-123 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 SUPERFAMILY SSF53067 5 252 4.86E-73 T 29-03-2018 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 1.5E-62 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 441 5.8E-24 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS17735 ad5b412e526e097634fe9aa169ce30f7 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 SMART SM00448 2 112 7.3E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 Gene3D G3DSA:2.20.25.10 203 238 2.2E-8 T 29-03-2018 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 Gene3D G3DSA:2.40.50.40 136 201 5.4E-7 T 29-03-2018 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 SMART SM00850 143 238 4.0E-24 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 Gene3D G3DSA:3.40.50.2300 1 135 9.4E-31 T 29-03-2018 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 Pfam PF04397 LytTr DNA-binding domain 144 237 1.3E-22 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 Pfam PF00072 Response regulator receiver domain 4 111 2.9E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS21950 d439374c275bfb8c088febbbbfd216b8 239 SUPERFAMILY SSF52172 1 123 3.98E-32 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 SUPERFAMILY SSF46689 3 80 3.08E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 Pfam PF09209 Domain of unknown function (DUF1956) 97 218 6.7E-36 T 29-03-2018 IPR015292 Transcription regulator YbiH, C-terminal CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.6E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 7.6E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.8E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 Gene3D G3DSA:1.10.357.10 63 224 2.2E-38 T 29-03-2018 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 Gene3D G3DSA:1.10.357.10 47 62 0.021 T 29-03-2018 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 Gene3D G3DSA:1.10.10.60 1 46 6.6E-16 T 29-03-2018 CKQ55_RS03220 bd9298706f3faea7a8346230d2e84227 225 SUPERFAMILY SSF48498 91 219 1.29E-34 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 Gene3D G3DSA:3.10.20.70 2 104 5.2E-28 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.3E-218 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.2E-31 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 SMART SM01230 102 379 8.4E-151 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 Gene3D G3DSA:3.30.590.10 105 457 1.3E-123 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 SUPERFAMILY SSF54368 3 99 8.11E-36 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 5.6E-139 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CKQ55_RS12720 d70e40d0f030854e683dff9f733781a3 469 SUPERFAMILY SSF55931 102 468 3.04E-139 T 29-03-2018 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 29 45 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 94 114 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 297 316 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 49 68 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 331 349 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 22 45 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 352 371 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 159 179 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 236 255 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 PRINTS PR00166 Aromatic amino acid permease signature 197 219 3.4E-104 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 Pfam PF03222 Tryptophan/tyrosine permease family 14 406 1.1E-151 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CKQ55_RS09395 cc10f4604683c55749091684d3f4775d 418 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 19 399 7.4E-157 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CKQ55_RS10680 bf04aa6ced75507d91ef2a3023af8a1f 337 Gene3D G3DSA:2.60.40.1090 194 334 9.1E-17 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10680 bf04aa6ced75507d91ef2a3023af8a1f 337 Pfam PF00419 Fimbrial protein 192 328 6.3E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10680 bf04aa6ced75507d91ef2a3023af8a1f 337 SUPERFAMILY SSF49401 195 321 5.47E-13 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 SUPERFAMILY SSF57783 15 96 9.35E-10 T 29-03-2018 CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 SUPERFAMILY SSF46785 674 772 1.01E-39 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Gene3D G3DSA:3.40.50.300 454 651 3.5E-13 T 29-03-2018 CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 SUPERFAMILY SSF52540 434 622 9.49E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Pfam PF03288 Poxvirus D5 protein-like 673 772 7.8E-21 T 29-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 SMART SM00778 30 69 8.2E-15 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Gene3D G3DSA:3.90.580.10 16 97 1.1E-11 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Gene3D G3DSA:3.40.1360.10 199 315 2.3E-14 T 29-03-2018 CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Gene3D G3DSA:1.10.10.10 675 771 1.1E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Pfam PF08706 D5 N terminal like 342 470 1.8E-7 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Pfam PF13362 Toprim domain 213 303 1.5E-11 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 SMART SM00493 211 286 3.9E-7 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 SMART SM00885 339 466 1.9E-21 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CKQ55_RS19630 e99bcf7f945a8e2b0ce2901979d88fa4 780 Pfam PF08273 Zinc-binding domain of primase-helicase 31 69 1.6E-12 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 SUPERFAMILY SSF55136 214 281 8.11E-9 T 29-03-2018 CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 Gene3D G3DSA:1.10.10.60 1 57 6.3E-7 T 29-03-2018 CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 Gene3D G3DSA:1.10.10.60 58 106 6.3E-11 T 29-03-2018 CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 Gene3D G3DSA:3.20.80.10 124 282 1.1E-5 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 SMART SM00342 20 103 2.1E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 Pfam PF12833 Helix-turn-helix domain 30 104 5.0E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29555 14dad7d92209db6f1eace248826ae1fe 284 SUPERFAMILY SSF46689 56 109 2.02E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 Gene3D G3DSA:3.40.190.80 149 246 3.3E-33 T 29-03-2018 CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 245 2.5E-108 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 Pfam PF00459 Inositol monophosphatase family 3 234 7.3E-50 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 Gene3D G3DSA:3.30.540.10 1 148 2.6E-41 T 29-03-2018 CKQ55_RS10325 464dc0d0cfdcd19a4c75a7b87ad69eb3 247 SUPERFAMILY SSF56655 1 244 9.95E-75 T 29-03-2018 CKQ55_RS29020 77894d30f952815ecefdce8731809894 258 SUPERFAMILY SSF52540 4 228 1.45E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29020 77894d30f952815ecefdce8731809894 258 Pfam PF00005 ABC transporter 23 162 7.9E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29020 77894d30f952815ecefdce8731809894 258 SMART SM00382 32 212 1.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29020 77894d30f952815ecefdce8731809894 258 Gene3D G3DSA:3.40.50.300 1 245 8.0E-63 T 29-03-2018 CKQ55_RS29020 77894d30f952815ecefdce8731809894 258 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.2E-64 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 0.0 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 SUPERFAMILY SSF50715 340 548 1.52E-79 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Gene3D G3DSA:2.40.240.10 463 548 5.0E-33 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Gene3D G3DSA:3.40.50.620 154 260 1.3E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Gene3D G3DSA:3.40.50.620 42 153 5.1E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Gene3D G3DSA:2.40.240.10 348 462 3.0E-47 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Gene3D G3DSA:1.10.1160.10 261 338 2.3E-37 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.171 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.2E-128 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 Gene3D G3DSA:3.40.50.620 7 41 0.0065 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS03965 dd86c490bdf1ff17be1203606642d849 555 SUPERFAMILY SSF52374 10 337 6.82E-104 T 29-03-2018 CKQ55_RS26865 c9a63dc367595cc6fe56ec3183ed2d00 190 SUPERFAMILY SSF49899 4 177 4.75E-36 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS26865 c9a63dc367595cc6fe56ec3183ed2d00 190 Gene3D G3DSA:2.60.120.200 1 182 1.3E-41 T 29-03-2018 CKQ55_RS26865 c9a63dc367595cc6fe56ec3183ed2d00 190 Pfam PF07081 Protein of unknown function (DUF1349) 7 178 5.9E-68 T 29-03-2018 IPR009784 Protein of unknown function DUF1349 CKQ55_RS26865 c9a63dc367595cc6fe56ec3183ed2d00 190 PIRSF PIRSF022704 1 190 6.0E-69 T 29-03-2018 IPR015987 Uncharacterised conserved protein UCP022704 CKQ55_RS14875 4e543cdec09a2c9a3153aa5d6eeea03d 106 Pfam PF10956 Protein of unknown function (DUF2756) 1 101 1.2E-40 T 29-03-2018 IPR020158 Protein of unknown function DUF2756 CKQ55_RS31350 c4458f40df3dbc1c47ad4d88c1d6c7ad 279 Pfam PF00809 Pterin binding enzyme 5 248 3.2E-70 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS31350 c4458f40df3dbc1c47ad4d88c1d6c7ad 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 1.3E-82 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CKQ55_RS31350 c4458f40df3dbc1c47ad4d88c1d6c7ad 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS31350 c4458f40df3dbc1c47ad4d88c1d6c7ad 279 Gene3D G3DSA:3.20.20.20 1 277 2.6E-73 T 29-03-2018 CKQ55_RS31350 c4458f40df3dbc1c47ad4d88c1d6c7ad 279 SUPERFAMILY SSF51717 3 265 1.2E-67 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS31350 c4458f40df3dbc1c47ad4d88c1d6c7ad 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 SUPERFAMILY SSF51395 13 325 1.26E-71 T 29-03-2018 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 329 1.3E-170 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 Pfam PF01207 Dihydrouridine synthase (Dus) 17 326 1.3E-97 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 330 52.942 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 PIRSF PIRSF006621 2 329 4.9E-71 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS11130 b71efc034dbeb030f5d279ff576ea91a 332 Gene3D G3DSA:3.20.20.70 11 252 8.3E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS04085 807e2d5d773f680e6095021d3e2e5277 555 Pfam PF17287 POTRA domain 149 201 3.0E-14 T 29-03-2018 IPR035251 ShlB, POTRA domain CKQ55_RS04085 807e2d5d773f680e6095021d3e2e5277 555 Gene3D G3DSA:2.40.160.50 174 555 2.9E-40 T 29-03-2018 CKQ55_RS04085 807e2d5d773f680e6095021d3e2e5277 555 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 207 519 1.4E-88 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal CKQ55_RS04085 807e2d5d773f680e6095021d3e2e5277 555 PIRSF PIRSF029745 4 555 8.9E-122 T 29-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CKQ55_RS04085 807e2d5d773f680e6095021d3e2e5277 555 Gene3D G3DSA:3.10.20.310 78 146 4.5E-7 T 29-03-2018 CKQ55_RS04085 807e2d5d773f680e6095021d3e2e5277 555 Pfam PF08479 POTRA domain, ShlB-type 84 144 2.2E-12 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CKQ55_RS27530 76215ca873ecd7ceb40e2d57bc21c1bc 469 ProSitePatterns PS00216 Sugar transport proteins signature 1. 100 116 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS27530 76215ca873ecd7ceb40e2d57bc21c1bc 469 ProSitePatterns PS00217 Sugar transport proteins signature 2. 142 167 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS27530 76215ca873ecd7ceb40e2d57bc21c1bc 469 Gene3D G3DSA:1.20.1250.20 30 241 4.3E-29 T 29-03-2018 CKQ55_RS27530 76215ca873ecd7ceb40e2d57bc21c1bc 469 SUPERFAMILY SSF103473 24 468 2.62E-66 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27530 76215ca873ecd7ceb40e2d57bc21c1bc 469 Pfam PF00083 Sugar (and other) transporter 40 469 3.8E-37 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS27530 76215ca873ecd7ceb40e2d57bc21c1bc 469 Gene3D G3DSA:1.20.1250.20 260 469 4.9E-25 T 29-03-2018 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 SMART SM01130 8 295 3.2E-85 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 PIRSF PIRSF001365 4 297 5.7E-83 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 SUPERFAMILY SSF51569 7 291 5.55E-83 T 29-03-2018 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 Pfam PF00701 Dihydrodipicolinate synthetase family 9 288 5.1E-73 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 1.0E-23 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 1.0E-23 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 1.0E-23 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 1.0E-23 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS09500 07feb60b4f6c73cb2e393741e9273437 303 Gene3D G3DSA:3.20.20.70 6 295 2.2E-85 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 SUPERFAMILY SSF46689 59 108 2.64E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 Pfam PF12833 Helix-turn-helix domain 28 106 5.9E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 Gene3D G3DSA:1.10.10.60 60 111 1.5E-13 T 29-03-2018 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 5.9E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 5.9E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 SUPERFAMILY SSF46689 7 56 2.15E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 SMART SM00342 22 105 1.1E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS01665 a680dc4c4248d2095f64e8b450e0815a 120 Gene3D G3DSA:1.10.10.60 3 58 3.8E-13 T 29-03-2018 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 5 367 5.3E-95 T 29-03-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 Pfam PF03275 UDP-galactopyranose mutase 150 349 3.9E-75 T 29-03-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 SUPERFAMILY SSF54373 248 316 4.71E-26 T 29-03-2018 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 74 7.1E-18 T 29-03-2018 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 SUPERFAMILY SSF51971 3 265 3.3E-53 T 29-03-2018 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 SUPERFAMILY SSF51971 334 368 3.3E-53 T 29-03-2018 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 Gene3D G3DSA:3.40.50.720 1 294 1.7E-41 T 29-03-2018 CKQ55_RS22710 2c710088e95352f89197b85e29590c7d 384 Gene3D G3DSA:3.40.50.720 295 373 1.1E-10 T 29-03-2018 CKQ55_RS21940 1443a3a0c908c7222e3b29e200fc955b 252 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21940 1443a3a0c908c7222e3b29e200fc955b 252 SUPERFAMILY SSF46955 3 90 5.95E-19 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS21940 1443a3a0c908c7222e3b29e200fc955b 252 Pfam PF13411 MerR HTH family regulatory protein 4 71 2.8E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21940 1443a3a0c908c7222e3b29e200fc955b 252 SMART SM00422 4 73 5.8E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS21940 1443a3a0c908c7222e3b29e200fc955b 252 Gene3D G3DSA:1.10.1660.10 1 131 3.0E-24 T 29-03-2018 CKQ55_RS27820 f458c6d6d6b4f49c719c96b1b041b7a8 98 Pfam PF01381 Helix-turn-helix 39 76 1.9E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS27820 f458c6d6d6b4f49c719c96b1b041b7a8 98 SUPERFAMILY SSF47413 39 87 3.58E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS27820 f458c6d6d6b4f49c719c96b1b041b7a8 98 Gene3D G3DSA:1.10.260.40 38 97 9.8E-10 T 29-03-2018 CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 SUPERFAMILY SSF47413 2 67 7.93E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 Pfam PF00717 Peptidase S24-like 138 201 1.1E-11 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 SUPERFAMILY SSF51306 87 220 9.68E-21 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 Gene3D G3DSA:2.10.109.10 95 224 2.0E-20 T 29-03-2018 CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 Pfam PF01381 Helix-turn-helix 9 62 8.5E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 Gene3D G3DSA:1.10.260.40 1 85 1.3E-17 T 29-03-2018 CKQ55_RS05615 675a4e741f14e9e28c4ef87d6ed6edfb 229 SMART SM00530 8 62 1.4E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS30130 9746120bd80d3d5cdfba90eaf28403b5 263 SUPERFAMILY SSF51126 15 196 2.62E-8 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS30130 9746120bd80d3d5cdfba90eaf28403b5 263 Pfam PF13229 Right handed beta helix region 16 137 4.6E-7 T 29-03-2018 CKQ55_RS30130 9746120bd80d3d5cdfba90eaf28403b5 263 Gene3D G3DSA:2.160.20.10 3 252 8.0E-14 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS24595 51953c06f64f6069b9b6065c022c85d6 300 Pfam PF00483 Nucleotidyl transferase 10 276 2.6E-26 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CKQ55_RS24595 51953c06f64f6069b9b6065c022c85d6 300 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 1.5E-115 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CKQ55_RS24595 51953c06f64f6069b9b6065c022c85d6 300 Gene3D G3DSA:3.90.550.10 1 300 1.4E-60 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS24595 51953c06f64f6069b9b6065c022c85d6 300 SUPERFAMILY SSF53448 8 289 4.06E-63 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS15600 4cd9ff74d86a08c2d9aeaaff82b6f122 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15600 4cd9ff74d86a08c2d9aeaaff82b6f122 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 3.2E-112 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS15600 4cd9ff74d86a08c2d9aeaaff82b6f122 483 Pfam PF00474 Sodium:solute symporter family 36 432 4.2E-138 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS15600 4cd9ff74d86a08c2d9aeaaff82b6f122 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 7.7E-228 T 29-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 CKQ55_RS15600 4cd9ff74d86a08c2d9aeaaff82b6f122 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15710 592f1d2dd2ecfcab165bd177bee39408 91 SUPERFAMILY SSF52038 1 89 2.62E-26 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) CKQ55_RS15710 592f1d2dd2ecfcab165bd177bee39408 91 Gene3D G3DSA:3.30.370.10 1 90 6.5E-19 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) CKQ55_RS15710 592f1d2dd2ecfcab165bd177bee39408 91 Pfam PF01337 Barstar (barnase inhibitor) 5 80 7.8E-5 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 SUPERFAMILY SSF116726 322 394 5.75E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 SUPERFAMILY SSF116726 230 295 1.96E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 Pfam PF02080 TrkA-C domain 231 297 6.0E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 Pfam PF02080 TrkA-C domain 326 394 9.7E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 Gene3D G3DSA:3.30.70.1450 217 306 9.6E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 Pfam PF03600 Citrate transporter 430 606 2.8E-21 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 Pfam PF03600 Citrate transporter 16 197 4.6E-38 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CKQ55_RS21090 b03d1e0b9d492fbc75377d2c74917b63 610 Gene3D G3DSA:3.30.70.1450 322 398 5.8E-17 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 Gene3D G3DSA:1.20.1250.20 23 235 3.7E-23 T 29-03-2018 CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 SUPERFAMILY SSF103661 465 497 6.8E-12 T 29-03-2018 IPR015041 Osmosensory transporter coiled coil CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 1.3E-142 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 Pfam PF00083 Sugar (and other) transporter 28 448 6.9E-69 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 Gene3D G3DSA:1.20.1250.20 236 490 3.4E-28 T 29-03-2018 CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 SUPERFAMILY SSF103473 24 446 4.45E-69 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS10815 82970f2b19e016b611e792f95bd233c4 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 1.5E-22 T 29-03-2018 IPR015041 Osmosensory transporter coiled coil CKQ55_RS23970 c1750683348c9baf026e164eede0bc09 521 SUPERFAMILY SSF141868 272 513 2.09E-73 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23970 c1750683348c9baf026e164eede0bc09 521 Pfam PF00563 EAL domain 273 501 6.0E-59 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23970 c1750683348c9baf026e164eede0bc09 521 Pfam PF12792 CSS motif domain associated with EAL 43 235 9.2E-29 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CKQ55_RS23970 c1750683348c9baf026e164eede0bc09 521 Gene3D G3DSA:3.20.20.450 261 520 5.2E-76 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23970 c1750683348c9baf026e164eede0bc09 521 SMART SM00052 265 506 4.7E-96 T 29-03-2018 IPR001633 EAL domain CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 Pfam PF01979 Amidohydrolase family 57 383 3.0E-20 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 SUPERFAMILY SSF51556 60 360 8.82E-87 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 41.25 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 Gene3D G3DSA:3.20.20.140 76 359 1.6E-59 T 29-03-2018 CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 23 397 5.3E-145 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 Gene3D G3DSA:2.30.40.10 2 75 1.5E-17 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 SUPERFAMILY SSF51338 361 399 7.78E-28 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS07005 c5ee2f98a00d00d17dc2159feb60de78 402 SUPERFAMILY SSF51338 2 60 7.78E-28 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS20880 1339925814668fa7d960794738f88a1b 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 9.4E-44 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 PIRSF PIRSF006621 1 321 3.4E-101 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 2.9E-140 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 1.0E-115 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.173 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 Gene3D G3DSA:1.10.1200.80 252 321 1.3E-20 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 SUPERFAMILY SSF51395 10 319 1.63E-86 T 29-03-2018 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS15585 6e6cd8f6bf3d5db67f129bc3154df5e6 321 Gene3D G3DSA:3.20.20.70 8 240 8.0E-57 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 Gene3D G3DSA:2.40.230.10 34 290 9.3E-96 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 127 146 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 279 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 204 222 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 157 171 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 104 120 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 82 99 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 172 190 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 PRINTS PR01486 Bacterial phospholipase A1 protein signature 237 254 2.1E-87 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 Pfam PF02253 Phospholipase A1 45 286 2.3E-89 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS11820 b0c4ff65aff64c8816a6dabb214f62d8 290 SUPERFAMILY SSF56931 41 289 5.36E-92 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CKQ55_RS29950 637ee044706f6bdbe71237dc93f95275 394 Gene3D G3DSA:1.20.1250.20 7 193 2.1E-15 T 29-03-2018 CKQ55_RS29950 637ee044706f6bdbe71237dc93f95275 394 Gene3D G3DSA:1.20.1250.20 203 392 3.4E-19 T 29-03-2018 CKQ55_RS29950 637ee044706f6bdbe71237dc93f95275 394 Pfam PF07690 Major Facilitator Superfamily 21 349 2.6E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS29950 637ee044706f6bdbe71237dc93f95275 394 SUPERFAMILY SSF103473 8 389 5.1E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29950 637ee044706f6bdbe71237dc93f95275 394 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 3.9E-133 T 29-03-2018 IPR004747 Cyanate transport system protein GO:0016021 CKQ55_RS22340 b7df7a53208d9aa49305ab864d9a4fa0 213 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 211 1.9E-68 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CKQ55_RS22340 b7df7a53208d9aa49305ab864d9a4fa0 213 Gene3D G3DSA:2.40.50.260 9 104 6.8E-5 T 29-03-2018 CKQ55_RS22340 b7df7a53208d9aa49305ab864d9a4fa0 213 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 119 4.8E-47 T 29-03-2018 IPR006531 Gp5 N-terminal CKQ55_RS17650 0e1dd64c387b88e7a96868a651959827 176 Pfam PF13671 AAA domain 2 118 9.0E-11 T 29-03-2018 CKQ55_RS17650 0e1dd64c387b88e7a96868a651959827 176 Gene3D G3DSA:3.40.50.300 1 173 4.8E-23 T 29-03-2018 CKQ55_RS17650 0e1dd64c387b88e7a96868a651959827 176 SUPERFAMILY SSF52540 1 168 2.2E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21490 1a289f1860d96d61d2a6818954fedb94 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 3.7E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS21490 1a289f1860d96d61d2a6818954fedb94 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 2.8E-49 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS21490 1a289f1860d96d61d2a6818954fedb94 163 SUPERFAMILY SSF141452 2 160 3.53E-44 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS21490 1a289f1860d96d61d2a6818954fedb94 163 Gene3D G3DSA:2.30.110.20 1 163 6.3E-52 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS08580 b5658fcb68c5aea33ca72dfd2d2f3605 449 Gene3D G3DSA:2.60.40.10 8 134 9.2E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS25995 0a6d73a8798d5a8ee8c085a6183d3ddf 127 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.6E-54 T 29-03-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 CKQ55_RS25995 0a6d73a8798d5a8ee8c085a6183d3ddf 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 3.7E-24 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS25995 0a6d73a8798d5a8ee8c085a6183d3ddf 127 Gene3D G3DSA:1.20.1290.10 6 126 3.7E-36 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS25995 0a6d73a8798d5a8ee8c085a6183d3ddf 127 SUPERFAMILY SSF69118 5 123 2.09E-38 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS18100 b2f2682477a3375a507e19d1f05932ab 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.048 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CKQ55_RS18100 b2f2682477a3375a507e19d1f05932ab 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 289 1.8E-106 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CKQ55_RS18100 b2f2682477a3375a507e19d1f05932ab 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 3.2E-76 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CKQ55_RS18100 b2f2682477a3375a507e19d1f05932ab 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 SMART SM00922 176 273 2.3E-27 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 Gene3D G3DSA:3.20.20.120 163 381 2.6E-61 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 59 156 5.9E-13 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 Pfam PF13378 Enolase C-terminal domain-like 186 383 6.4E-60 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 SUPERFAMILY SSF51604 144 385 2.1E-71 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 223 254 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 SUPERFAMILY SSF54826 27 158 2.46E-26 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS27845 576b32fe8441821c122ebc62a76fa5e4 398 Gene3D G3DSA:3.30.390.10 21 162 1.5E-28 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 Gene3D G3DSA:3.40.50.1860 20 139 1.5E-26 T 29-03-2018 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 Hamap MF_00258 Glutamate racemase [murI]. 22 274 35.06 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 1.0E-26 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 SUPERFAMILY SSF53681 127 279 2.4E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 Gene3D G3DSA:3.40.50.1860 140 281 1.0E-28 T 29-03-2018 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 SUPERFAMILY SSF53681 24 125 3.79E-31 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS12155 216fe6980c66546e013a84f3feac8c26 284 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 269 8.0E-92 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS18030 792a5d2e7efc88e1f816577357c3a5aa 159 SUPERFAMILY SSF55729 8 138 3.09E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS18030 792a5d2e7efc88e1f816577357c3a5aa 159 Gene3D G3DSA:3.40.630.30 4 157 3.9E-20 T 29-03-2018 CKQ55_RS18030 792a5d2e7efc88e1f816577357c3a5aa 159 Pfam PF00583 Acetyltransferase (GNAT) family 17 129 1.1E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS06700 c3e8205bad71bce96f948212b9eed88e 692 SUPERFAMILY SSF161098 141 405 4.84E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06700 c3e8205bad71bce96f948212b9eed88e 692 Gene3D G3DSA:1.10.3720.10 140 407 3.3E-33 T 29-03-2018 CKQ55_RS06700 c3e8205bad71bce96f948212b9eed88e 692 Gene3D G3DSA:1.10.3720.10 425 686 5.1E-34 T 29-03-2018 CKQ55_RS06700 c3e8205bad71bce96f948212b9eed88e 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 1.1E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06700 c3e8205bad71bce96f948212b9eed88e 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 400 3.2E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06700 c3e8205bad71bce96f948212b9eed88e 692 SUPERFAMILY SSF161098 434 674 5.51E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS17515 0d0e66e20ecf1506e9b88ef03829d30b 389 SUPERFAMILY SSF56349 99 380 1.29E-68 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS17515 0d0e66e20ecf1506e9b88ef03829d30b 389 Gene3D G3DSA:1.10.443.10 204 385 1.9E-28 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS17515 0d0e66e20ecf1506e9b88ef03829d30b 389 Pfam PF13356 Arm DNA-binding domain 3 86 3.4E-20 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CKQ55_RS17515 0d0e66e20ecf1506e9b88ef03829d30b 389 Gene3D G3DSA:1.10.150.130 88 203 5.2E-19 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS17515 0d0e66e20ecf1506e9b88ef03829d30b 389 Pfam PF00589 Phage integrase family 206 370 3.6E-27 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 Gene3D G3DSA:1.10.490.50 257 342 9.8E-7 T 29-03-2018 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 Gene3D G3DSA:1.10.490.50 148 232 3.7E-8 T 29-03-2018 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 Pfam PF13411 MerR HTH family regulatory protein 5 71 1.6E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 Gene3D G3DSA:1.10.1660.10 1 58 5.5E-21 T 29-03-2018 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 Gene3D G3DSA:1.10.1660.10 59 130 3.2E-8 T 29-03-2018 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 4.5E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 4.5E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 4.5E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 SMART SM00422 3 72 2.7E-26 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS24390 e7eacfcf1d10f7b4e0d4fbc7c41a760f 348 SUPERFAMILY SSF46955 5 115 8.42E-27 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS26915 985d17f9c12190a450a2414d6464bd9b 323 PIRSF PIRSF016839 1 323 6.8E-73 T 29-03-2018 CKQ55_RS26915 985d17f9c12190a450a2414d6464bd9b 323 Gene3D G3DSA:3.20.20.140 1 321 8.1E-48 T 29-03-2018 CKQ55_RS26915 985d17f9c12190a450a2414d6464bd9b 323 SUPERFAMILY SSF51556 3 322 1.52E-68 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS26915 985d17f9c12190a450a2414d6464bd9b 323 Pfam PF02126 Phosphotriesterase family 11 320 9.3E-47 T 29-03-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 CKQ55_RS13435 964f6a78f39a041454f8c18858194b66 184 Gene3D G3DSA:3.90.79.10 8 182 2.8E-37 T 29-03-2018 CKQ55_RS13435 964f6a78f39a041454f8c18858194b66 184 SUPERFAMILY SSF55811 12 178 1.03E-39 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS13435 964f6a78f39a041454f8c18858194b66 184 PRINTS PR00502 NUDIX hydrolase family signature 88 103 7.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS13435 964f6a78f39a041454f8c18858194b66 184 PRINTS PR00502 NUDIX hydrolase family signature 74 88 7.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS13435 964f6a78f39a041454f8c18858194b66 184 Pfam PF00293 NUDIX domain 46 157 4.9E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS13435 964f6a78f39a041454f8c18858194b66 184 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS08725 07baaa4941355f11e9507de3106aa059 171 Gene3D G3DSA:3.90.950.10 1 170 7.6E-60 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS08725 07baaa4941355f11e9507de3106aa059 171 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.669 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase CKQ55_RS08725 07baaa4941355f11e9507de3106aa059 171 Pfam PF01931 Protein of unknown function DUF84 7 165 4.2E-53 T 29-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CKQ55_RS08725 07baaa4941355f11e9507de3106aa059 171 SUPERFAMILY SSF52972 2 167 1.83E-56 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS08725 07baaa4941355f11e9507de3106aa059 171 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 2.4E-67 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 SUPERFAMILY SSF56104 3 232 2.55E-75 T 29-03-2018 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.828 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 Gene3D G3DSA:3.30.470.20 94 220 3.8E-45 T 29-03-2018 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 Pfam PF01259 SAICAR synthetase 7 231 3.0E-59 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 1.9E-83 T 29-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CKQ55_RS20395 950c21b4dd8f9d080ce6499d737bfbf6 237 Gene3D G3DSA:3.30.200.20 1 93 2.9E-24 T 29-03-2018 CKQ55_RS15695 79e1669aa2383636db411cc9abd0a99f 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.5E-20 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CKQ55_RS15695 79e1669aa2383636db411cc9abd0a99f 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.388 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 SMART SM00778 34 69 2.8E-13 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 Pfam PF06048 Domain of unknown function (DUF927) 367 645 3.5E-55 T 29-03-2018 IPR009270 Domain of unknown function DUF927 CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 Pfam PF08273 Zinc-binding domain of primase-helicase 35 69 1.1E-12 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 Gene3D G3DSA:3.40.1360.10 206 332 4.8E-18 T 29-03-2018 CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 SUPERFAMILY SSF57783 17 95 2.55E-11 T 29-03-2018 CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 Pfam PF13362 Toprim domain 222 318 4.1E-12 T 29-03-2018 IPR006171 TOPRIM domain CKQ55_RS05285 60d4be3be8d7a6f888a20a10286bc08c 918 Gene3D G3DSA:3.90.580.10 7 100 2.6E-13 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.5E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 Gene3D G3DSA:1.10.10.10 122 219 8.8E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-32 T 29-03-2018 CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 Pfam PF00072 Response regulator receiver domain 3 112 3.3E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 SMART SM00448 1 112 7.1E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 SUPERFAMILY SSF52172 1 174 2.57E-36 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS16840 f16fbdf2887b728817c824ddc7f8f5ca 219 SMART SM00862 145 216 8.4E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS18390 d71dabf7e3b5369ed132f50ae2057885 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 2.8E-114 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS18390 d71dabf7e3b5369ed132f50ae2057885 351 SUPERFAMILY SSF52733 6 342 5.1E-110 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS18390 d71dabf7e3b5369ed132f50ae2057885 351 Gene3D G3DSA:1.10.1610.10 5 72 2.7E-28 T 29-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS18390 d71dabf7e3b5369ed132f50ae2057885 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 348 33.178 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS18390 d71dabf7e3b5369ed132f50ae2057885 351 Pfam PF02277 Phosphoribosyltransferase 11 343 3.7E-117 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS18390 d71dabf7e3b5369ed132f50ae2057885 351 Gene3D G3DSA:3.40.50.10210 73 329 1.1E-91 T 29-03-2018 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 Gene3D G3DSA:1.20.1080.10 1 259 7.5E-79 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 9.5E-74 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 PRINTS PR00783 Major intrinsic protein family signature 151 169 9.6E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 PRINTS PR00783 Major intrinsic protein family signature 48 72 9.6E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 9.6E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 PRINTS PR00783 Major intrinsic protein family signature 9 28 9.6E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 PRINTS PR00783 Major intrinsic protein family signature 184 206 9.6E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 PRINTS PR00783 Major intrinsic protein family signature 85 104 9.6E-52 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 Pfam PF00230 Major intrinsic protein 2 251 1.3E-72 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 ProSitePatterns PS00221 MIP family signature. 66 74 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CKQ55_RS13585 bfca25c914086d70ad2441f77d92ee64 283 SUPERFAMILY SSF81338 9 257 1.44E-79 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS29240 b44461f30e6bbc3c49c964e6d9739ac8 292 Gene3D G3DSA:3.40.190.10 139 236 3.1E-25 T 29-03-2018 CKQ55_RS29240 b44461f30e6bbc3c49c964e6d9739ac8 292 Pfam PF03180 NLPA lipoprotein 59 277 5.3E-36 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS29240 b44461f30e6bbc3c49c964e6d9739ac8 292 SUPERFAMILY SSF53850 48 279 3.98E-32 T 29-03-2018 CKQ55_RS29240 b44461f30e6bbc3c49c964e6d9739ac8 292 Gene3D G3DSA:3.40.190.10 46 138 3.3E-7 T 29-03-2018 CKQ55_RS09265 05d2885574ada0ba285e22ef8ce20de8 111 Gene3D G3DSA:2.10.260.10 39 107 5.0E-4 T 29-03-2018 CKQ55_RS09265 05d2885574ada0ba285e22ef8ce20de8 111 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 20 71 1.9E-18 T 29-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CKQ55_RS09265 05d2885574ada0ba285e22ef8ce20de8 111 Hamap MF_01193 Endoribonuclease SymE [symE]. 1 107 31.43 T 29-03-2018 IPR020883 Type I toxin-antitoxin system, SymE toxin GO:0003723|GO:0004521|GO:0005737|GO:0016070 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 Pfam PF08442 ATP-grasp domain 2 203 1.4E-83 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.468 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.8E-184 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 Gene3D G3DSA:3.40.50.261 240 385 2.5E-42 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 Pfam PF00549 CoA-ligase 262 382 1.1E-24 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 PIRSF PIRSF001554 1 388 2.7E-155 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 Gene3D G3DSA:3.30.470.20 96 239 5.3E-53 T 29-03-2018 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 SUPERFAMILY SSF56059 1 238 5.83E-82 T 29-03-2018 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 Gene3D G3DSA:3.30.1490.20 21 95 4.1E-25 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS03720 cc90efa2c5525d55b72fef389f6cb2c4 388 SUPERFAMILY SSF52210 239 385 3.66E-53 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CKQ55_RS26540 459ec477bb3893769f2064fb9c9e1f69 453 SUPERFAMILY SSF55073 294 448 2.09E-33 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS26540 459ec477bb3893769f2064fb9c9e1f69 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 446 1.6E-30 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26540 459ec477bb3893769f2064fb9c9e1f69 453 SMART SM00267 277 450 7.4E-36 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26540 459ec477bb3893769f2064fb9c9e1f69 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 288 450 6.3E-34 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS26540 459ec477bb3893769f2064fb9c9e1f69 453 Gene3D G3DSA:3.30.70.270 281 452 4.5E-38 T 29-03-2018 CKQ55_RS24850 232444cd965337a822e1721fca3a9faa 277 Gene3D G3DSA:3.40.50.300 151 191 0.29 T 29-03-2018 CKQ55_RS24850 232444cd965337a822e1721fca3a9faa 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 5.6E-72 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CKQ55_RS24850 232444cd965337a822e1721fca3a9faa 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 71.82 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CKQ55_RS24850 232444cd965337a822e1721fca3a9faa 277 Gene3D G3DSA:3.40.50.300 192 276 0.0012 T 29-03-2018 CKQ55_RS01700 abfc1dfe9196ba485bd5a1953ffc9b1d 246 SMART SM00382 31 218 2.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01700 abfc1dfe9196ba485bd5a1953ffc9b1d 246 SUPERFAMILY SSF52540 6 239 2.53E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01700 abfc1dfe9196ba485bd5a1953ffc9b1d 246 Gene3D G3DSA:3.40.50.300 3 246 5.9E-68 T 29-03-2018 CKQ55_RS01700 abfc1dfe9196ba485bd5a1953ffc9b1d 246 Pfam PF00005 ABC transporter 22 170 5.3E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS01700 abfc1dfe9196ba485bd5a1953ffc9b1d 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01700 abfc1dfe9196ba485bd5a1953ffc9b1d 246 PIRSF PIRSF039085 3 246 9.2E-96 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS08030 1ad1e54cf5052a4e7758a900a035ec4b 468 Pfam PF13347 MFS/sugar transport protein 13 432 4.1E-106 T 29-03-2018 CKQ55_RS08030 1ad1e54cf5052a4e7758a900a035ec4b 468 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 446 1.9E-127 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS08030 1ad1e54cf5052a4e7758a900a035ec4b 468 SUPERFAMILY SSF103473 12 418 1.7E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS08030 1ad1e54cf5052a4e7758a900a035ec4b 468 Gene3D G3DSA:1.20.1250.20 214 467 6.4E-16 T 29-03-2018 CKQ55_RS08030 1ad1e54cf5052a4e7758a900a035ec4b 468 Gene3D G3DSA:1.20.1250.20 13 213 4.0E-20 T 29-03-2018 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 Gene3D G3DSA:3.80.30.10 114 291 1.2E-28 T 29-03-2018 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 Pfam PF04055 Radical SAM superfamily 40 222 5.5E-22 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 ProSitePatterns PS01087 Radical activating enzymes signature. 34 55 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 Pfam PF13353 4Fe-4S single cluster domain 33 169 1.9E-12 T 29-03-2018 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 84 282 2.5E-53 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 PIRSF PIRSF000371 62 291 2.5E-65 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 PIRSF PIRSF000371 14 82 1.5E-26 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 SUPERFAMILY SSF102114 13 66 3.53E-14 T 29-03-2018 CKQ55_RS01220 1f587ad2594612327791295082e8e9a2 291 SUPERFAMILY SSF102114 98 253 3.53E-14 T 29-03-2018 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 Gene3D G3DSA:3.20.70.20 122 739 2.3E-148 T 29-03-2018 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 Pfam PF03477 ATP cone domain 6 92 2.3E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.3E-178 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.1E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.1E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.1E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.1E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.1E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.1E-38 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 3.7E-12 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 SUPERFAMILY SSF48168 10 221 1.44E-72 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.2E-119 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21375 1a86c4ef01b950871bb2aaa95b15eb2d 761 SUPERFAMILY SSF51998 222 740 4.58E-168 T 29-03-2018 CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 Gene3D G3DSA:3.40.50.300 269 484 6.0E-33 T 29-03-2018 CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 SUPERFAMILY SSF52540 274 481 5.06E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 SUPERFAMILY SSF52540 4 227 1.22E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 SMART SM00382 278 470 2.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 SMART SM00382 29 217 4.7E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 Gene3D G3DSA:3.40.50.300 1 267 1.8E-55 T 29-03-2018 CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 Pfam PF00005 ABC transporter 20 170 1.1E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS03870 d8a4a610cafaacb66277ba8a02c7b7b5 494 Pfam PF00005 ABC transporter 274 421 4.3E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS18065 b65f9a20c7425057e9f1e50ff5cbc8a9 72 SUPERFAMILY SSF50182 21 71 2.45E-18 T 29-03-2018 IPR010920 LSM domain CKQ55_RS18065 b65f9a20c7425057e9f1e50ff5cbc8a9 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 70 4.5E-24 T 29-03-2018 IPR010305 Protein of unknown function DUF903 CKQ55_RS18065 b65f9a20c7425057e9f1e50ff5cbc8a9 72 Gene3D G3DSA:2.30.30.100 21 71 6.8E-27 T 29-03-2018 CKQ55_RS11765 89638d5761ba56aa2976f20250804239 270 Gene3D G3DSA:3.40.50.1820 25 265 2.5E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS11765 89638d5761ba56aa2976f20250804239 270 Pfam PF01738 Dienelactone hydrolase family 42 265 1.8E-75 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CKQ55_RS11765 89638d5761ba56aa2976f20250804239 270 SUPERFAMILY SSF53474 33 264 1.79E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS21710 8fa58fc12404eea8730a1602075505fc 311 SUPERFAMILY SSF53613 7 304 2.65E-59 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS21710 8fa58fc12404eea8730a1602075505fc 311 Gene3D G3DSA:3.40.1190.20 2 310 8.1E-54 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS21710 8fa58fc12404eea8730a1602075505fc 311 Pfam PF00294 pfkB family carbohydrate kinase 5 294 4.8E-58 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS21710 8fa58fc12404eea8730a1602075505fc 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS16045 5d694fb5da44d8d1eca9c129bbf4c8d8 282 Pfam PF00809 Pterin binding enzyme 18 257 4.6E-88 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS16045 5d694fb5da44d8d1eca9c129bbf4c8d8 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 5.5E-102 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CKQ55_RS16045 5d694fb5da44d8d1eca9c129bbf4c8d8 282 SUPERFAMILY SSF51717 7 273 1.24E-104 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS16045 5d694fb5da44d8d1eca9c129bbf4c8d8 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS16045 5d694fb5da44d8d1eca9c129bbf4c8d8 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS16045 5d694fb5da44d8d1eca9c129bbf4c8d8 282 Gene3D G3DSA:3.20.20.20 2 282 2.2E-109 T 29-03-2018 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 Gene3D G3DSA:1.20.1560.10 5 330 4.6E-35 T 29-03-2018 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 Pfam PF00664 ABC transporter transmembrane region 69 292 6.5E-21 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 Gene3D G3DSA:3.40.50.300 331 585 1.4E-71 T 29-03-2018 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 SUPERFAMILY SSF52540 336 579 4.62E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 SUPERFAMILY SSF90123 16 331 6.8E-43 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 Pfam PF00005 ABC transporter 360 509 6.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27130 ef4f7882b3b4dc1ebd2a08c75579f4f7 600 SMART SM00382 369 562 2.0E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS00390 4405101f545c3b202276b17442d7fa21 303 Gene3D G3DSA:1.10.10.10 1 232 2.7E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00390 4405101f545c3b202276b17442d7fa21 303 Pfam PF13730 Helix-turn-helix domain 21 71 1.6E-11 T 29-03-2018 CKQ55_RS00390 4405101f545c3b202276b17442d7fa21 303 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 190 263 2.9E-20 T 29-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CKQ55_RS00390 4405101f545c3b202276b17442d7fa21 303 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 191 263 1.2E-25 T 29-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CKQ55_RS00020 4405101f545c3b202276b17442d7fa21 303 Gene3D G3DSA:1.10.10.10 1 232 2.7E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00020 4405101f545c3b202276b17442d7fa21 303 Pfam PF13730 Helix-turn-helix domain 21 71 1.6E-11 T 29-03-2018 CKQ55_RS00020 4405101f545c3b202276b17442d7fa21 303 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 190 263 2.9E-20 T 29-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CKQ55_RS00020 4405101f545c3b202276b17442d7fa21 303 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 191 263 1.2E-25 T 29-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 PIRSF PIRSF000101 3 568 6.3E-304 T 29-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Gene3D G3DSA:3.30.1370.20 434 517 7.8E-43 T 29-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Gene3D G3DSA:3.30.43.10 1 102 8.1E-12 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 SUPERFAMILY SSF56176 9 270 6.54E-76 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Pfam PF01565 FAD binding domain 46 165 2.1E-8 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 SUPERFAMILY SSF55103 275 566 2.01E-116 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Gene3D G3DSA:3.30.70.610 348 433 4.9E-30 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Gene3D G3DSA:3.30.70.610 268 347 1.2E-20 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Pfam PF09330 D-lactate dehydrogenase, membrane binding 277 566 4.4E-147 T 29-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CKQ55_RS21905 0b2e0093d0a61535ce835b28b58d3ea5 580 Gene3D G3DSA:3.30.465.10 106 267 3.9E-79 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CKQ55_RS31240 766fe4fa5c2edd7d8278b283296e30b7 25 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 25 1.3E-19 T 29-03-2018 IPR012605 RepA1 leader peptide Tap CKQ55_RS31240 766fe4fa5c2edd7d8278b283296e30b7 25 Pfam PF08048 Tap RepA1 leader peptide 1 25 8.3E-21 T 29-03-2018 IPR012605 RepA1 leader peptide Tap CKQ55_RS10395 e6819dac79ae1c8130881edcaafb0cb1 104 PIRSF PIRSF003135 1 101 2.5E-49 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CKQ55_RS10395 e6819dac79ae1c8130881edcaafb0cb1 104 Pfam PF00436 Single-strand binding protein family 3 87 5.4E-12 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CKQ55_RS10395 e6819dac79ae1c8130881edcaafb0cb1 104 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 23.399 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CKQ55_RS10395 e6819dac79ae1c8130881edcaafb0cb1 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 4.2E-35 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CKQ55_RS10395 e6819dac79ae1c8130881edcaafb0cb1 104 SUPERFAMILY SSF50249 1 103 4.8E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS10395 e6819dac79ae1c8130881edcaafb0cb1 104 Gene3D G3DSA:2.40.50.140 2 104 9.8E-12 T 29-03-2018 CKQ55_RS29160 58d109f02ffebfb7c5275abf09de4782 256 Gene3D G3DSA:3.20.20.370 2 249 1.6E-91 T 29-03-2018 CKQ55_RS29160 58d109f02ffebfb7c5275abf09de4782 256 Pfam PF03746 LamB/YcsF family 3 240 1.6E-89 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CKQ55_RS29160 58d109f02ffebfb7c5275abf09de4782 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 41.598 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CKQ55_RS29160 58d109f02ffebfb7c5275abf09de4782 256 SUPERFAMILY SSF88713 1 249 1.56E-85 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 Gene3D G3DSA:3.20.20.70 1 289 1.5E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 PIRSF PIRSF009264 1 423 1.9E-191 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 3 418 6.4E-205 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 SUPERFAMILY SSF51569 1 419 4.21E-167 T 29-03-2018 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 Pfam PF08013 Tagatose 6 phosphate kinase 1 418 1.3E-194 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 Gene3D G3DSA:1.10.400.20 290 403 9.4E-44 T 29-03-2018 CKQ55_RS16240 bc802e833075836a9f8810ecfe9aa91e 423 Hamap MF_01296 D-tagatose-1,6-bisphosphate aldolase subunit GatZ [gatZ]. 1 420 71.069 T 29-03-2018 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ GO:0019402 CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 SUPERFAMILY SSF52518 2 173 3.3E-28 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 SUPERFAMILY SSF52518 374 566 1.59E-23 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 Gene3D G3DSA:3.40.50.970 365 567 1.1E-21 T 29-03-2018 CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 Gene3D G3DSA:3.40.50.1220 190 364 3.7E-11 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 Gene3D G3DSA:3.40.50.970 1 175 3.0E-26 T 29-03-2018 CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 170 1.7E-30 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 409 564 8.8E-17 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CKQ55_RS23195 d6a10eb982c39fbd600b2eb9176ce986 567 SUPERFAMILY SSF52467 156 360 5.35E-11 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CKQ55_RS20235 2b3536a132a0d3dee25021067e2d0c23 130 Pfam PF06519 TolA C-terminal 44 123 2.5E-14 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20235 2b3536a132a0d3dee25021067e2d0c23 130 SUPERFAMILY SSF74653 43 126 1.31E-12 T 29-03-2018 CKQ55_RS20235 2b3536a132a0d3dee25021067e2d0c23 130 Gene3D G3DSA:3.30.1150.10 52 124 7.8E-12 T 29-03-2018 CKQ55_RS24750 eaf34032f113ae68d3ab12687fb99184 94 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 2 92 1.0E-28 T 29-03-2018 IPR020499 Uncharacterised protein family YdiZ CKQ55_RS24750 eaf34032f113ae68d3ab12687fb99184 94 Pfam PF11080 Endoribonuclease GhoS 2 92 1.6E-37 T 29-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 CKQ55_RS10915 6e93b735089d801f6f2cccc2f2939de9 303 Hamap MF_00988 D-allose kinase [alsK]. 1 302 69.945 T 29-03-2018 IPR030883 D-allose kinase GO:0019200|GO:0019316 KEGG: 00051+2.7.1.55 CKQ55_RS10915 6e93b735089d801f6f2cccc2f2939de9 303 Pfam PF00480 ROK family 9 299 4.8E-81 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS10915 6e93b735089d801f6f2cccc2f2939de9 303 ProSitePatterns PS01125 ROK family signature. 140 167 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CKQ55_RS10915 6e93b735089d801f6f2cccc2f2939de9 303 SUPERFAMILY SSF53067 8 301 6.22E-46 T 29-03-2018 CKQ55_RS10915 6e93b735089d801f6f2cccc2f2939de9 303 Gene3D G3DSA:3.30.420.40 120 303 1.9E-39 T 29-03-2018 CKQ55_RS10915 6e93b735089d801f6f2cccc2f2939de9 303 Gene3D G3DSA:3.30.420.40 1 119 4.7E-17 T 29-03-2018 CKQ55_RS07495 8d0997e928215d8fbab7657c990797c7 181 PIRSF PIRSF011484 1 181 3.6E-66 T 29-03-2018 IPR009822 YaeQ CKQ55_RS07495 8d0997e928215d8fbab7657c990797c7 181 Gene3D G3DSA:3.10.640.10 2 177 1.8E-74 T 29-03-2018 CKQ55_RS07495 8d0997e928215d8fbab7657c990797c7 181 SMART SM01322 1 176 1.0E-110 T 29-03-2018 IPR009822 YaeQ CKQ55_RS07495 8d0997e928215d8fbab7657c990797c7 181 SUPERFAMILY SSF52980 4 178 3.49E-69 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS07495 8d0997e928215d8fbab7657c990797c7 181 Pfam PF07152 YaeQ protein 1 173 1.2E-71 T 29-03-2018 IPR009822 YaeQ CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 151 173 1.4E-18 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 174 188 1.4E-18 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 21 33 1.4E-18 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 54 73 1.4E-18 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 Gene3D G3DSA:3.40.50.150 1 198 8.5E-35 T 29-03-2018 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 Pfam PF01555 DNA methylase 150 197 5.1E-13 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 Pfam PF01555 DNA methylase 21 130 3.7E-10 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS30245 adb9af7daa961d12af5af53582b3ef24 207 SUPERFAMILY SSF53335 3 197 7.19E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 SUPERFAMILY SSF48113 32 431 1.92E-139 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Gene3D G3DSA:1.10.520.10 442 591 6.1E-32 T 29-03-2018 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 26 727 0.0 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Gene3D G3DSA:1.10.420.10 592 703 9.7E-34 T 29-03-2018 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Gene3D G3DSA:1.10.420.10 234 399 1.0E-37 T 29-03-2018 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Gene3D G3DSA:1.10.520.10 65 221 9.5E-36 T 29-03-2018 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Hamap MF_01961 Catalase-peroxidase [katG]. 11 727 38.906 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 481 507 2.5E-49 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 74 2.5E-49 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 35 57 2.5E-49 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 269 292 2.5E-49 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 76 101 2.5E-49 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Pfam PF00141 Peroxidase 405 701 4.5E-35 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 Pfam PF00141 Peroxidase 84 398 1.6E-48 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 SUPERFAMILY SSF48113 437 727 8.25E-105 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00458 Haem peroxidase superfamily signature 320 335 6.5E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00458 Haem peroxidase superfamily signature 177 189 6.5E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00458 Haem peroxidase superfamily signature 99 113 6.5E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00458 Haem peroxidase superfamily signature 159 176 6.5E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS27515 8f88b03933669ca355606c70b9d73dc4 727 PRINTS PR00458 Haem peroxidase superfamily signature 261 276 6.5E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CKQ55_RS05955 9522c5f93dd8292e7299e1151bc39d3a 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 1.8E-81 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS05955 9522c5f93dd8292e7299e1151bc39d3a 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 293 3.3E-12 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS05955 9522c5f93dd8292e7299e1151bc39d3a 397 SUPERFAMILY SSF111369 52 300 1.44E-89 T 29-03-2018 CKQ55_RS05955 9522c5f93dd8292e7299e1151bc39d3a 397 Gene3D G3DSA:1.20.1600.10 30 387 5.9E-34 T 29-03-2018 CKQ55_RS05955 9522c5f93dd8292e7299e1151bc39d3a 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 45 360 5.2E-8 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS09555 f8a410a31f33846139044c17bfa79a32 119 Gene3D G3DSA:3.30.450.20 24 116 3.7E-51 T 29-03-2018 CKQ55_RS09555 f8a410a31f33846139044c17bfa79a32 119 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 16 114 7.5E-52 T 29-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CKQ55_RS09555 f8a410a31f33846139044c17bfa79a32 119 SUPERFAMILY SSF143737 5 115 1.03E-53 T 29-03-2018 CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 Gene3D G3DSA:3.40.50.300 1 238 1.6E-69 T 29-03-2018 CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 SUPERFAMILY SSF52540 4 242 1.11E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 Gene3D G3DSA:2.40.50.140 290 345 7.7E-8 T 29-03-2018 CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 Pfam PF00005 ABC transporter 19 161 3.4E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 Gene3D G3DSA:2.40.50.100 239 289 9.8E-10 T 29-03-2018 CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 SUPERFAMILY SSF50331 236 359 1.6E-25 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS06045 2d5c9b618a4e7c8e2dc05f1fa5fe8be0 369 SMART SM00382 28 211 5.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28725 a792532f792375aeb8c4d56a5b4c422f 140 Gene3D G3DSA:2.10.109.10 25 140 8.5E-22 T 29-03-2018 CKQ55_RS28725 a792532f792375aeb8c4d56a5b4c422f 140 Pfam PF00717 Peptidase S24-like 57 119 1.9E-10 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS28725 a792532f792375aeb8c4d56a5b4c422f 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 4.7E-7 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS28725 a792532f792375aeb8c4d56a5b4c422f 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 4.7E-7 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS28725 a792532f792375aeb8c4d56a5b4c422f 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 4.7E-7 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS28725 a792532f792375aeb8c4d56a5b4c422f 140 SUPERFAMILY SSF51306 13 136 8.02E-32 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 SUPERFAMILY SSF53720 3 415 1.07E-115 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 Gene3D G3DSA:3.40.605.10 2 237 8.5E-45 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 Pfam PF00171 Aldehyde dehydrogenase family 8 282 9.7E-18 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.598 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 6.5E-190 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 Gene3D G3DSA:3.40.605.10 238 417 9.0E-37 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS06905 73cddcd951da1a77bcd17ddbfb6db19f 417 PIRSF PIRSF000151 1 417 2.5E-177 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CKQ55_RS22715 035f508615e744717f65dcf937983445 297 SUPERFAMILY SSF53448 4 274 1.37E-31 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22715 035f508615e744717f65dcf937983445 297 Gene3D G3DSA:3.90.550.10 2 228 1.6E-24 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22715 035f508615e744717f65dcf937983445 297 Pfam PF00535 Glycosyl transferase family 2 4 112 8.0E-18 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 SMART SM00796 4 202 2.8E-94 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 2.5E-96 T 29-03-2018 IPR010016 KipI family CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 6.2E-69 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 SUPERFAMILY SSF160467 5 93 1.57E-9 T 29-03-2018 CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 Gene3D G3DSA:3.30.1360.40 1 82 2.2E-8 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 SUPERFAMILY SSF50891 89 214 6.45E-46 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS03795 102082e8a6c3cf45859e02674052b023 218 Gene3D G3DSA:2.40.100.10 86 217 4.0E-52 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 6.2E-85 T 29-03-2018 CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 SUPERFAMILY SSF51735 6 253 2.0E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 Gene3D G3DSA:3.40.50.720 3 261 3.1E-43 T 29-03-2018 CKQ55_RS29375 5b66b6d0f66b640c5ef789e5ca89bec5 262 PIRSF PIRSF000094 1 260 1.2E-123 T 29-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 PIRSF PIRSF005784 3 191 7.7E-83 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 Gene3D G3DSA:3.30.70.20 127 147 1.4E-11 T 29-03-2018 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 8.1E-17 T 29-03-2018 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 SUPERFAMILY SSF54862 38 176 3.49E-28 T 29-03-2018 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 Gene3D G3DSA:3.30.70.20 148 180 2.0E-5 T 29-03-2018 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 Gene3D G3DSA:3.30.70.20 70 126 2.6E-7 T 29-03-2018 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 190 3.0E-84 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.2E-10 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 CKQ55_RS25740 edb990f68871752cdedeb67f9cead061 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.035 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CKQ55_RS00355 4c0b8ee542e3df976f62538b757b9c82 328 SMART SM00507 243 292 0.003 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS00355 4c0b8ee542e3df976f62538b757b9c82 328 Gene3D G3DSA:3.30.50.20 253 321 9.6E-15 T 29-03-2018 CKQ55_RS00355 4c0b8ee542e3df976f62538b757b9c82 328 Pfam PF06147 Protein of unknown function (DUF968) 109 323 3.0E-70 T 29-03-2018 IPR010373 Protein of unknown function DUF968 CKQ55_RS01630 1a039768a1e214a606967aca4024b59b 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 261 2.5E-13 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS01630 1a039768a1e214a606967aca4024b59b 369 Gene3D G3DSA:1.10.287.470 116 165 3.7E-9 T 29-03-2018 CKQ55_RS01630 1a039768a1e214a606967aca4024b59b 369 SUPERFAMILY SSF111369 51 263 7.98E-21 T 29-03-2018 CKQ55_RS01630 1a039768a1e214a606967aca4024b59b 369 Gene3D G3DSA:2.40.50.100 63 115 5.7E-12 T 29-03-2018 CKQ55_RS01630 1a039768a1e214a606967aca4024b59b 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 356 5.1E-56 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS01630 1a039768a1e214a606967aca4024b59b 369 Gene3D G3DSA:2.40.50.100 166 344 2.8E-5 T 29-03-2018 CKQ55_RS26305 efb949cabd2a875f07d1438f4d384d91 362 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 263 336 8.6E-18 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS26305 efb949cabd2a875f07d1438f4d384d91 362 Gene3D G3DSA:3.40.50.300 1 353 1.5E-24 T 29-03-2018 CKQ55_RS26305 efb949cabd2a875f07d1438f4d384d91 362 SUPERFAMILY SSF52540 1 341 1.24E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26305 efb949cabd2a875f07d1438f4d384d91 362 PIRSF PIRSF029347 1 362 1.4E-150 T 29-03-2018 IPR014555 RecF-like CKQ55_RS26305 efb949cabd2a875f07d1438f4d384d91 362 Pfam PF13175 AAA ATPase domain 1 46 1.2E-12 T 29-03-2018 CKQ55_RS18535 6638e2a560ef3a8ee2fd95ea7e59f341 109 PIRSF PIRSF006257 1 108 3.0E-38 T 29-03-2018 IPR007384 Protein of unknown function UCP006257 CKQ55_RS18535 6638e2a560ef3a8ee2fd95ea7e59f341 109 Gene3D G3DSA:1.20.1440.40 3 104 5.3E-37 T 29-03-2018 IPR023376 YqcC-like domain CKQ55_RS18535 6638e2a560ef3a8ee2fd95ea7e59f341 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 2.5E-34 T 29-03-2018 IPR023376 YqcC-like domain CKQ55_RS18535 6638e2a560ef3a8ee2fd95ea7e59f341 109 SUPERFAMILY SSF158452 1 106 8.89E-38 T 29-03-2018 IPR023376 YqcC-like domain CKQ55_RS19385 6511a57bc2f7657f12b6fc106fc9512e 81 SUPERFAMILY SSF52833 1 72 1.85E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS19385 6511a57bc2f7657f12b6fc106fc9512e 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 1.7E-34 T 29-03-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 CKQ55_RS19385 6511a57bc2f7657f12b6fc106fc9512e 81 Gene3D G3DSA:3.40.30.10 1 80 3.6E-13 T 29-03-2018 CKQ55_RS19385 6511a57bc2f7657f12b6fc106fc9512e 81 Pfam PF00462 Glutaredoxin 3 58 8.7E-14 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CKQ55_RS13340 b1c08c4017203bfc94e044ae72a93004 321 Gene3D G3DSA:1.25.40.10 166 319 4.4E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS13340 b1c08c4017203bfc94e044ae72a93004 321 Pfam PF04754 Putative transposase, YhgA-like 9 210 1.3E-89 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS13340 b1c08c4017203bfc94e044ae72a93004 321 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 310 1.5E-59 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS23550 8c3bcd5b37307c8397947a3d473f57e3 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 1.7E-44 T 29-03-2018 IPR020262 Uncharacterised protein family YecJ CKQ55_RS23550 8c3bcd5b37307c8397947a3d473f57e3 83 ProDom PD060536 YECJ YPO1738 1 77 4.0E-30 T 29-03-2018 IPR020262 Uncharacterised protein family YecJ CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 Gene3D G3DSA:2.40.160.10 16 356 8.6E-53 T 29-03-2018 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 1.3E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 309 326 1.3E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 1.3E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 1.3E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 225 237 1.3E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 SUPERFAMILY SSF56935 22 356 6.28E-71 T 29-03-2018 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 2.5E-62 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 2.5E-62 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 2.5E-62 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00183 E.coli/Salmonella-type porin signature 263 282 2.5E-62 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.5E-62 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 PRINTS PR00183 E.coli/Salmonella-type porin signature 231 248 2.5E-62 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS23375 3170a0c1d414109dac19c508f5d0a553 356 Pfam PF00267 Gram-negative porin 27 356 1.0E-120 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS15965 e307de7ec143d99f45b4f534ebb98d9d 211 PIRSF PIRSF004649 1 211 3.4E-63 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CKQ55_RS15965 e307de7ec143d99f45b4f534ebb98d9d 211 Gene3D G3DSA:3.10.450.50 26 71 1.3E-5 T 29-03-2018 CKQ55_RS15965 e307de7ec143d99f45b4f534ebb98d9d 211 Gene3D G3DSA:3.10.450.50 72 172 1.1E-21 T 29-03-2018 CKQ55_RS15965 e307de7ec143d99f45b4f534ebb98d9d 211 Pfam PF05494 MlaC protein 33 198 9.0E-54 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CKQ55_RS19590 914eab3174b3c8ba6a19bca211d4cf2c 303 SUPERFAMILY SSF46785 4 106 1.82E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19590 914eab3174b3c8ba6a19bca211d4cf2c 303 Gene3D G3DSA:1.10.10.10 2 89 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19590 914eab3174b3c8ba6a19bca211d4cf2c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.6E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS19590 914eab3174b3c8ba6a19bca211d4cf2c 303 Pfam PF03466 LysR substrate binding domain 93 293 1.5E-27 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS19590 914eab3174b3c8ba6a19bca211d4cf2c 303 SUPERFAMILY SSF53850 94 294 1.55E-29 T 29-03-2018 CKQ55_RS19590 914eab3174b3c8ba6a19bca211d4cf2c 303 Gene3D G3DSA:3.40.190.10 96 208 2.6E-14 T 29-03-2018 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 Gene3D G3DSA:3.30.420.40 1 235 1.4E-47 T 29-03-2018 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 460 9.2E-233 T 29-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 4.5E-30 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 SUPERFAMILY SSF53067 250 471 7.12E-33 T 29-03-2018 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 Gene3D G3DSA:3.30.420.40 236 484 2.0E-42 T 29-03-2018 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 53.533 T 29-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 2.3E-29 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS12370 00ddbe659f967572f3eca65ea95d0117 488 SUPERFAMILY SSF53067 6 245 2.63E-49 T 29-03-2018 CKQ55_RS18325 62d3fdef690c73c067b5b025fdb916c7 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 9.0E-42 T 29-03-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CKQ55_RS18325 62d3fdef690c73c067b5b025fdb916c7 189 Gene3D G3DSA:3.40.50.150 2 189 7.2E-27 T 29-03-2018 CKQ55_RS18325 62d3fdef690c73c067b5b025fdb916c7 189 Pfam PF05175 Methyltransferase small domain 24 101 7.6E-8 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CKQ55_RS18325 62d3fdef690c73c067b5b025fdb916c7 189 SUPERFAMILY SSF53335 3 157 1.32E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS24365 984d629541a7a037c71f8f10e85a0236 205 Pfam PF02661 Fic/DOC family 59 158 4.1E-21 T 29-03-2018 IPR003812 Fido domain CKQ55_RS24365 984d629541a7a037c71f8f10e85a0236 205 SUPERFAMILY SSF140931 36 202 4.45E-36 T 29-03-2018 IPR003812 Fido domain CKQ55_RS24365 984d629541a7a037c71f8f10e85a0236 205 Gene3D G3DSA:1.10.3290.10 10 205 6.6E-38 T 29-03-2018 IPR003812 Fido domain CKQ55_RS28800 d437a1ffd3aa9a00247a589849730abf 373 Gene3D G3DSA:1.20.1250.20 1 182 2.8E-23 T 29-03-2018 CKQ55_RS28800 d437a1ffd3aa9a00247a589849730abf 373 Gene3D G3DSA:1.20.1250.20 183 372 1.3E-17 T 29-03-2018 CKQ55_RS28800 d437a1ffd3aa9a00247a589849730abf 373 SUPERFAMILY SSF103473 2 371 3.01E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28800 d437a1ffd3aa9a00247a589849730abf 373 Pfam PF07690 Major Facilitator Superfamily 2 312 1.0E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 Gene3D G3DSA:1.10.10.60 2 54 5.5E-14 T 29-03-2018 CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 SUPERFAMILY SSF48498 75 164 3.52E-13 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 SUPERFAMILY SSF46689 4 80 8.48E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.6E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.6E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 Gene3D G3DSA:1.10.357.10 55 185 3.8E-20 T 29-03-2018 CKQ55_RS01595 5088f3a71e9fc470a8a5b6002e277146 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 1.7E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 8.4E-272 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 SUPERFAMILY SSF51984 1 90 1.96E-24 T 29-03-2018 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Gene3D G3DSA:3.40.1190.10 91 313 1.7E-36 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.0E-19 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 8.5E-10 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.426 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 SUPERFAMILY SSF53623 95 308 9.29E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Pfam PF08245 Mur ligase middle domain 108 291 1.9E-17 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 SUPERFAMILY SSF53244 312 448 4.97E-37 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Gene3D G3DSA:3.40.50.720 1 90 6.2E-13 T 29-03-2018 CKQ55_RS10240 0d64c8194307788428258bf0fb3e3594 457 Gene3D G3DSA:3.90.190.20 314 456 1.6E-27 T 29-03-2018 CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 SUPERFAMILY SSF53850 90 283 6.98E-25 T 29-03-2018 CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 Gene3D G3DSA:3.40.190.10 178 253 1.6E-6 T 29-03-2018 CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 Gene3D G3DSA:3.40.190.10 90 177 5.5E-12 T 29-03-2018 CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 SUPERFAMILY SSF46785 5 89 8.16E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.4E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 Pfam PF03466 LysR substrate binding domain 90 266 1.8E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS22775 ebc4f53cd8a6078d167bd0d7efe8a2b4 296 Gene3D G3DSA:1.10.10.10 4 85 4.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 SUPERFAMILY SSF47384 240 319 1.49E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 SMART SM00388 255 320 1.7E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 Gene3D G3DSA:3.30.565.10 315 473 1.9E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 Pfam PF17203 Single cache domain 3 35 167 5.6E-7 T 29-03-2018 IPR033463 Single cache domain 3 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 319 2.3E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 SUPERFAMILY SSF103190 70 170 5.89E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 1.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 1.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 1.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 SUPERFAMILY SSF55874 310 469 3.27E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 SMART SM00387 363 473 4.5E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 Gene3D G3DSA:3.30.450.20 28 175 3.5E-26 T 29-03-2018 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 Gene3D G3DSA:1.10.287.130 236 314 3.8E-10 T 29-03-2018 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 SMART SM00304 204 255 0.0084 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CKQ55_RS08700 ffc417a5843a878c289018e4a690c41f 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 469 5.9E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08085 d4803447e628c89aa091214eddf064d1 64 SUPERFAMILY SSF57716 3 62 6.13E-23 T 29-03-2018 CKQ55_RS08085 d4803447e628c89aa091214eddf064d1 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.062 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CKQ55_RS08085 d4803447e628c89aa091214eddf064d1 64 Gene3D G3DSA:3.30.50.10 2 60 1.1E-27 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CKQ55_RS08085 d4803447e628c89aa091214eddf064d1 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 56 1.4E-25 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CKQ55_RS10860 6c71dd21b9104d98ecfb842cad3202de 228 Gene3D G3DSA:3.40.50.300 1 224 1.2E-45 T 29-03-2018 CKQ55_RS10860 6c71dd21b9104d98ecfb842cad3202de 228 Pfam PF00005 ABC transporter 27 180 2.0E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10860 6c71dd21b9104d98ecfb842cad3202de 228 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS10860 6c71dd21b9104d98ecfb842cad3202de 228 SMART SM00382 35 228 1.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10860 6c71dd21b9104d98ecfb842cad3202de 228 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 220 1.6E-109 T 29-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS10860 6c71dd21b9104d98ecfb842cad3202de 228 SUPERFAMILY SSF52540 4 224 2.59E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21760 bb3e3286d66c509354ee39f9551e8870 278 Pfam PF00756 Putative esterase 21 271 9.1E-72 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CKQ55_RS21760 bb3e3286d66c509354ee39f9551e8870 278 SUPERFAMILY SSF53474 1 276 8.65E-89 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS21760 bb3e3286d66c509354ee39f9551e8870 278 Gene3D G3DSA:3.40.50.1820 1 276 2.4E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS21760 bb3e3286d66c509354ee39f9551e8870 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 1.1E-122 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CKQ55_RS24920 69174c4ad4807335edb8b739a6e48286 125 Gene3D G3DSA:2.60.300.12 18 125 2.1E-31 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS24920 69174c4ad4807335edb8b739a6e48286 125 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CKQ55_RS24920 69174c4ad4807335edb8b739a6e48286 125 SUPERFAMILY SSF89360 18 111 3.73E-26 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS24920 69174c4ad4807335edb8b739a6e48286 125 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 18 122 9.9E-46 T 29-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 CKQ55_RS24920 69174c4ad4807335edb8b739a6e48286 125 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 118 1.1E-17 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CKQ55_RS24920 69174c4ad4807335edb8b739a6e48286 125 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 121 7.5E-32 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 Pfam PF01782 RimM N-terminal domain 16 96 2.1E-26 T 29-03-2018 IPR002676 RimM protein GO:0006364 CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 SUPERFAMILY SSF50447 13 99 2.4E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.4E-62 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 Gene3D G3DSA:2.40.30.60 12 100 3.8E-28 T 29-03-2018 IPR002676 RimM protein GO:0006364 CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 25.024 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 Gene3D G3DSA:2.30.30.240 102 177 2.2E-23 T 29-03-2018 CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 Pfam PF05239 PRC-barrel domain 104 177 1.9E-9 T 29-03-2018 IPR027275 PRC-barrel domain CKQ55_RS19740 e2bd8f6e1579fa9aa0ae210ee86b5c5b 182 SUPERFAMILY SSF50346 106 182 5.1E-20 T 29-03-2018 IPR011033 PRC-barrel-like CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 26.628 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Gene3D G3DSA:2.30.33.40 2 96 1.8E-36 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SUPERFAMILY SSF50129 2 95 9.14E-34 T 29-03-2018 IPR011032 GroES-like CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SMART SM00883 3 95 4.8E-54 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.9E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.9E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 61 73 1.9E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS31425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.2E-33 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 SMART SM00382 33 220 8.0E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 Gene3D G3DSA:3.40.50.300 1 228 4.8E-67 T 29-03-2018 CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 Pfam PF00005 ABC transporter 24 172 1.1E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 Pfam PF02687 FtsX-like permease family 553 641 1.9E-11 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 SUPERFAMILY SSF52540 4 225 2.03E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02275 f85481ace5c8ee25c68cb6709af05ff4 648 Pfam PF12704 MacB-like periplasmic core domain 272 489 5.4E-37 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 PRINTS PR01438 Universal stress protein signature 121 143 8.3E-15 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 PRINTS PR01438 Universal stress protein signature 2 20 8.3E-15 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 PRINTS PR01438 Universal stress protein signature 104 116 8.3E-15 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 Pfam PF00582 Universal stress protein family 1 143 1.1E-26 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 SUPERFAMILY SSF52402 1 143 2.6E-28 T 29-03-2018 CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 Gene3D G3DSA:3.40.50.620 2 143 3.6E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS26235 29f06f8f5cb04c6498cefd54977f6bf2 143 PIRSF PIRSF006276 1 143 1.3E-17 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS02395 66c9a0f1c47ea24b8689664f3b78f514 281 SUPERFAMILY SSF161098 8 266 5.36E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02395 66c9a0f1c47ea24b8689664f3b78f514 281 Gene3D G3DSA:1.10.3720.10 11 273 5.0E-41 T 29-03-2018 CKQ55_RS02395 66c9a0f1c47ea24b8689664f3b78f514 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 273 8.5E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS08265 8ea7708d02943dc7b84b9abd58c2bb84 394 Gene3D G3DSA:1.20.1250.20 213 393 2.9E-22 T 29-03-2018 CKQ55_RS08265 8ea7708d02943dc7b84b9abd58c2bb84 394 SUPERFAMILY SSF103473 13 390 9.68E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS08265 8ea7708d02943dc7b84b9abd58c2bb84 394 Gene3D G3DSA:1.20.1250.20 11 205 3.1E-16 T 29-03-2018 CKQ55_RS08265 8ea7708d02943dc7b84b9abd58c2bb84 394 Pfam PF07690 Major Facilitator Superfamily 19 346 5.2E-29 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS08265 8ea7708d02943dc7b84b9abd58c2bb84 394 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 393 2.7E-163 T 29-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CKQ55_RS13355 ff324e9b919a66367ddecdc56a923f51 102 SUPERFAMILY SSF50118 1 102 4.9E-30 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS13355 ff324e9b919a66367ddecdc56a923f51 102 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 13 101 5.0E-22 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS13355 ff324e9b919a66367ddecdc56a923f51 102 Pfam PF01845 CcdB protein 2 101 3.4E-34 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS13355 ff324e9b919a66367ddecdc56a923f51 102 Gene3D G3DSA:2.30.30.110 2 101 1.2E-23 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 Gene3D G3DSA:3.40.50.300 1 227 1.0E-50 T 29-03-2018 CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 Gene3D G3DSA:3.40.50.300 243 476 1.1E-38 T 29-03-2018 CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 Pfam PF00005 ABC transporter 274 422 9.5E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 Pfam PF00005 ABC transporter 20 162 1.3E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 SUPERFAMILY SSF52540 3 221 5.87E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 SMART SM00382 281 471 1.3E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 SMART SM00382 29 249 8.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 SUPERFAMILY SSF52540 274 472 4.73E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS16450 67c2a629254e1b48a3907550be831513 495 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS12595 1dacb70f8dc28beb9b9f3edf35d71c34 455 Pfam PF03611 PTS system sugar-specific permease component 12 406 3.6E-120 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS11505 d5b363516b34a40010ead3c531d0459c 251 Gene3D G3DSA:3.40.50.720 1 245 1.9E-72 T 29-03-2018 CKQ55_RS11505 d5b363516b34a40010ead3c531d0459c 251 Pfam PF00899 ThiF family 9 240 7.1E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS11505 d5b363516b34a40010ead3c531d0459c 251 SUPERFAMILY SSF69572 2 245 7.85E-81 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS15395 56aa23d4e137982cf428a6ee5372d2cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.7E-44 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15395 56aa23d4e137982cf428a6ee5372d2cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.9E-47 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15395 56aa23d4e137982cf428a6ee5372d2cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15395 56aa23d4e137982cf428a6ee5372d2cc 117 SUPERFAMILY SSF53137 3 115 5.45E-54 T 29-03-2018 CKQ55_RS15395 56aa23d4e137982cf428a6ee5372d2cc 117 Gene3D G3DSA:3.30.420.100 1 117 1.5E-39 T 29-03-2018 CKQ55_RS04885 b798a2546e823e38e9c022841d487fa8 158 SUPERFAMILY SSF52728 1 157 3.14E-51 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS04885 b798a2546e823e38e9c022841d487fa8 158 Gene3D G3DSA:3.40.35.10 2 158 5.0E-53 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS04885 b798a2546e823e38e9c022841d487fa8 158 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 1.2E-49 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS04885 b798a2546e823e38e9c022841d487fa8 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 152 1.9E-59 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 SMART SM00861 13 179 3.7E-21 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 SUPERFAMILY SSF52518 10 177 1.55E-34 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 Pfam PF02779 Transketolase, pyrimidine binding domain 12 170 2.1E-20 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 Pfam PF02780 Transketolase, C-terminal domain 189 309 1.7E-33 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 SUPERFAMILY SSF52922 185 317 1.07E-37 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 Gene3D G3DSA:3.40.50.970 1 174 3.6E-31 T 29-03-2018 CKQ55_RS21060 f176504e9cb9ca36ad9145f396ed763b 317 Gene3D G3DSA:3.40.50.920 175 317 4.2E-40 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CKQ55_RS08435 88299c803315c93930cb6cdb5e93fe3b 302 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 26 291 4.8E-79 T 29-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CKQ55_RS08435 88299c803315c93930cb6cdb5e93fe3b 302 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 22 302 163.616 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CKQ55_RS08435 88299c803315c93930cb6cdb5e93fe3b 302 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 21 292 9.7E-106 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CKQ55_RS03080 cb63bb4a80447758ad57d276816f85e1 344 Gene3D G3DSA:3.20.20.100 1 328 4.0E-99 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS03080 cb63bb4a80447758ad57d276816f85e1 344 Pfam PF00248 Aldo/keto reductase family 15 320 2.7E-82 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS03080 cb63bb4a80447758ad57d276816f85e1 344 SUPERFAMILY SSF51430 1 320 5.37E-104 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 29-03-2018 IPR030655 NifH/chlL conserved site CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 52.068 T 29-03-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 4 278 3.9E-146 T 29-03-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 PRINTS PR00091 Nitrogenase component II signature 9 22 3.2E-37 T 29-03-2018 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 PRINTS PR00091 Nitrogenase component II signature 31 46 3.2E-37 T 29-03-2018 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 PRINTS PR00091 Nitrogenase component II signature 86 100 3.2E-37 T 29-03-2018 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 PRINTS PR00091 Nitrogenase component II signature 125 140 3.2E-37 T 29-03-2018 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 29-03-2018 IPR030655 NifH/chlL conserved site CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 275 8.7E-138 T 29-03-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 PIRSF PIRSF000363 2 278 1.7E-125 T 29-03-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 SUPERFAMILY SSF52540 3 276 4.7E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22875 1f2cf1195fcf206a0b43728a19617aba 293 Gene3D G3DSA:3.40.50.300 2 272 4.1E-45 T 29-03-2018 CKQ55_RS00010 ff480e5e952d6c40035307ce59797698 460 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 37 217 1.0E-55 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS00010 ff480e5e952d6c40035307ce59797698 460 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 38 221 9.0E-55 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS00380 ff480e5e952d6c40035307ce59797698 460 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 37 217 1.0E-55 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS00380 ff480e5e952d6c40035307ce59797698 460 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 38 221 9.0E-55 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 188 2.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 1.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 1.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 1.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 SUPERFAMILY SSF46894 124 190 2.21E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 Gene3D G3DSA:1.10.10.10 8 193 5.0E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12440 d50a6e7fb3372078f63b75e47145df84 193 SMART SM00421 134 191 1.3E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 SUPERFAMILY SSF100879 247 347 8.37E-7 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Gene3D G3DSA:3.30.1490.100 252 365 1.8E-26 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Gene3D G3DSA:1.10.150.20 175 251 1.6E-14 T 29-03-2018 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Gene3D G3DSA:3.30.70.270 37 115 5.6E-15 T 29-03-2018 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Gene3D G3DSA:3.30.70.270 116 174 1.5E-6 T 29-03-2018 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Pfam PF00817 impB/mucB/samB family 6 150 8.5E-33 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Pfam PF13438 Domain of unknown function (DUF4113) 374 422 6.9E-21 T 29-03-2018 IPR025188 Domain of unknown function DUF4113 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 355 2.8E-19 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CKQ55_RS30840 540daa01e81fffba2f4651acfa79d940 424 SUPERFAMILY SSF56672 1 239 2.58E-61 T 29-03-2018 CKQ55_RS11230 d8c67274924d368b5e11d0bd3fca85cc 245 Pfam PF03591 AzlC protein 15 153 2.5E-35 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 Gene3D G3DSA:2.40.50.100 240 289 3.4E-13 T 29-03-2018 CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 SUPERFAMILY SSF52540 4 243 8.96E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 Pfam PF08402 TOBE domain 278 348 3.8E-9 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 SMART SM00382 29 326 2.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 SUPERFAMILY SSF50331 237 355 1.34E-29 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 Gene3D G3DSA:3.40.50.300 2 239 1.5E-66 T 29-03-2018 CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 Gene3D G3DSA:2.40.50.140 290 341 3.7E-15 T 29-03-2018 CKQ55_RS14865 9427d64e9d200a664b023cb3d4ad5f4e 356 Pfam PF00005 ABC transporter 21 162 4.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS08805 b2286fd43b8dc094fa235b027ca074c5 357 SUPERFAMILY SSF52151 21 279 3.4E-44 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS08805 b2286fd43b8dc094fa235b027ca074c5 357 Pfam PF01734 Patatin-like phospholipase 27 195 1.1E-20 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CKQ55_RS08805 b2286fd43b8dc094fa235b027ca074c5 357 Gene3D G3DSA:3.40.1090.10 16 280 1.2E-31 T 29-03-2018 CKQ55_RS28715 f0318128705d4dbc00acd4e9ecc464bf 355 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 123 2.1E-25 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS28715 f0318128705d4dbc00acd4e9ecc464bf 355 Gene3D G3DSA:3.40.50.720 1 136 1.5E-41 T 29-03-2018 CKQ55_RS28715 f0318128705d4dbc00acd4e9ecc464bf 355 Gene3D G3DSA:3.30.360.10 137 345 2.8E-41 T 29-03-2018 CKQ55_RS28715 f0318128705d4dbc00acd4e9ecc464bf 355 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 225 1.3E-12 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28715 f0318128705d4dbc00acd4e9ecc464bf 355 SUPERFAMILY SSF51735 2 200 9.56E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS09820 7d042bda3f80c356fb434ab8b4487c39 153 SUPERFAMILY SSF53098 2 146 3.79E-33 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS09820 7d042bda3f80c356fb434ab8b4487c39 153 Pfam PF00665 Integrase core domain 6 105 1.8E-26 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CKQ55_RS09820 7d042bda3f80c356fb434ab8b4487c39 153 Gene3D G3DSA:3.30.420.10 1 153 2.5E-32 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS30835 87518be535bf61222dfa75635cd46170 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 2.1E-8 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30835 87518be535bf61222dfa75635cd46170 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 2.1E-8 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30835 87518be535bf61222dfa75635cd46170 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 2.1E-8 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CKQ55_RS30835 87518be535bf61222dfa75635cd46170 141 Gene3D G3DSA:2.10.109.10 20 137 1.1E-22 T 29-03-2018 CKQ55_RS30835 87518be535bf61222dfa75635cd46170 141 SUPERFAMILY SSF51306 14 135 3.31E-31 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS30835 87518be535bf61222dfa75635cd46170 141 Pfam PF00717 Peptidase S24-like 58 120 1.8E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS23020 f74dfd65b2f846bdf7879a1f86be840d 510 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 446 463 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS23020 f74dfd65b2f846bdf7879a1f86be840d 510 Pfam PF02378 Phosphotransferase system, EIIC 11 345 1.2E-50 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS23020 f74dfd65b2f846bdf7879a1f86be840d 510 Gene3D G3DSA:3.30.1360.60 432 506 5.1E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS23020 f74dfd65b2f846bdf7879a1f86be840d 510 SUPERFAMILY SSF55604 436 507 2.22E-17 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS23020 f74dfd65b2f846bdf7879a1f86be840d 510 Pfam PF00367 phosphotransferase system, EIIB 436 467 2.9E-11 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS23020 f74dfd65b2f846bdf7879a1f86be840d 510 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 405 492 5.5E-13 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 Gene3D G3DSA:1.10.10.10 126 214 5.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 SMART SM00421 147 204 2.4E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 SUPERFAMILY SSF52172 3 159 1.66E-32 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-33 T 29-03-2018 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 Pfam PF00072 Response regulator receiver domain 4 116 2.9E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 5.7E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23480 eab9527cbd194b4b520ca93c46fee2b1 218 SMART SM00448 2 115 1.1E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS20480 050f91d8e14e7c4c59a331c8f9e2c65e 338 Gene3D G3DSA:3.40.50.10750 140 296 7.7E-58 T 29-03-2018 CKQ55_RS20480 050f91d8e14e7c4c59a331c8f9e2c65e 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 319 2.4E-98 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS20480 050f91d8e14e7c4c59a331c8f9e2c65e 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 320 3.8E-120 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS20480 050f91d8e14e7c4c59a331c8f9e2c65e 338 Gene3D G3DSA:3.40.50.2300 3 93 0.0011 T 29-03-2018 CKQ55_RS20480 050f91d8e14e7c4c59a331c8f9e2c65e 338 SUPERFAMILY SSF53659 3 321 1.32E-79 T 29-03-2018 CKQ55_RS20480 050f91d8e14e7c4c59a331c8f9e2c65e 338 PIRSF PIRSF000428 1 326 4.4E-107 T 29-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CKQ55_RS20630 0eb598ec74438087163fc27017f28d66 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.7E-49 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS20630 0eb598ec74438087163fc27017f28d66 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.5E-51 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS20630 0eb598ec74438087163fc27017f28d66 169 SUPERFAMILY SSF51261 12 167 2.09E-56 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS20630 0eb598ec74438087163fc27017f28d66 169 Gene3D G3DSA:2.70.70.10 9 169 2.8E-59 T 29-03-2018 CKQ55_RS20630 0eb598ec74438087163fc27017f28d66 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CKQ55_RS01830 8e8e0a8d8a1052b3502fce196ce61bf1 233 Pfam PF15977 Winged helix-turn-helix DNA binding 150 217 1.2E-23 T 29-03-2018 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 Gene3D G3DSA:3.40.190.10 92 184 5.5E-20 T 29-03-2018 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 Gene3D G3DSA:3.40.190.10 185 272 1.8E-16 T 29-03-2018 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 SUPERFAMILY SSF46785 3 114 1.89E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 66 1.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 Gene3D G3DSA:1.10.10.10 1 86 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 SUPERFAMILY SSF53850 93 297 2.02E-33 T 29-03-2018 CKQ55_RS28550 7a7499e6e0a1c1f9c4953366af8680fe 305 Pfam PF03466 LysR substrate binding domain 92 295 3.8E-34 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS18830 e2502a6f01c61c3c626116b851d88ed8 182 Gene3D G3DSA:2.60.40.1090 29 182 1.8E-30 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS18830 e2502a6f01c61c3c626116b851d88ed8 182 Pfam PF00419 Fimbrial protein 32 182 8.7E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS18830 e2502a6f01c61c3c626116b851d88ed8 182 SUPERFAMILY SSF49401 30 182 3.03E-35 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 Gene3D G3DSA:3.20.20.100 1 262 2.7E-85 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 PIRSF PIRSF000097 1 265 4.2E-67 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 SUPERFAMILY SSF51430 2 259 7.73E-84 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.6E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.6E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.6E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.6E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.6E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS07405 0bb2a9c33d9916b984a838f8437156d4 267 Pfam PF00248 Aldo/keto reductase family 8 250 1.8E-50 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS01140 36288bb048fd7c0543e0ba9ed2ca7029 415 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 307 323 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site CKQ55_RS01140 36288bb048fd7c0543e0ba9ed2ca7029 415 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 365 3.2E-20 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CKQ55_RS01140 36288bb048fd7c0543e0ba9ed2ca7029 415 SUPERFAMILY SSF53254 27 412 3.7E-78 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS01140 36288bb048fd7c0543e0ba9ed2ca7029 415 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 33 47 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site CKQ55_RS01140 36288bb048fd7c0543e0ba9ed2ca7029 415 Gene3D G3DSA:3.40.50.1240 17 415 2.2E-53 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS26455 f8940668e84b6b2207c90a9abffe6524 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 236 1.5E-29 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CKQ55_RS26455 f8940668e84b6b2207c90a9abffe6524 263 Pfam PF02567 Phenazine biosynthesis-like protein 9 255 1.7E-49 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CKQ55_RS26455 f8940668e84b6b2207c90a9abffe6524 263 Gene3D G3DSA:3.10.310.10 124 250 3.1E-32 T 29-03-2018 CKQ55_RS26455 f8940668e84b6b2207c90a9abffe6524 263 PIRSF PIRSF016184 1 262 8.7E-47 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CKQ55_RS26455 f8940668e84b6b2207c90a9abffe6524 263 SUPERFAMILY SSF54506 3 262 2.51E-73 T 29-03-2018 CKQ55_RS26455 f8940668e84b6b2207c90a9abffe6524 263 Gene3D G3DSA:3.10.310.10 1 123 2.7E-26 T 29-03-2018 CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 50.239 T 29-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 Pfam PF00270 DEAD/DEAH box helicase 28 198 1.6E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 SUPERFAMILY SSF52540 35 354 7.29E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 Gene3D G3DSA:3.40.50.300 1 226 3.0E-59 T 29-03-2018 CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 SMART SM00490 262 343 1.5E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 SMART SM00487 23 223 8.9E-59 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 Gene3D G3DSA:3.40.50.300 227 443 1.7E-44 T 29-03-2018 CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 Pfam PF00271 Helicase conserved C-terminal domain 236 343 3.8E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS19905 708150aaafa43139ed0b5fb974308f2e 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 Gene3D G3DSA:2.40.30.10 188 269 3.0E-23 T 29-03-2018 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 SUPERFAMILY SSF160996 190 338 1.05E-42 T 29-03-2018 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 3.4E-7 T 29-03-2018 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 3.4E-7 T 29-03-2018 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.4E-7 T 29-03-2018 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 Gene3D G3DSA:1.10.8.260 270 321 5.4E-15 T 29-03-2018 IPR023166 HI0933 insert-like domain CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 Pfam PF03486 HI0933-like protein 5 392 6.8E-157 T 29-03-2018 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 Gene3D G3DSA:3.50.50.60 1 175 6.6E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 1.1E-128 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 SUPERFAMILY SSF51905 3 188 8.2E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS14480 40664ebeaddcf78af35697a49b3ea683 398 SUPERFAMILY SSF51905 337 396 8.2E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 SUPERFAMILY SSF51430 5 268 5.37E-89 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 PIRSF PIRSF000097 1 270 2.3E-97 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.6E-39 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 Pfam PF00248 Aldo/keto reductase family 200 260 2.5E-10 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.1E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.1E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.1E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.1E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.1E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 Gene3D G3DSA:3.20.20.100 2 274 1.8E-92 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS16880 a11a7b447998f375d384b6a11cae4054 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CKQ55_RS25925 49841c01b5724460b7d05ec46cb2791b 316 Gene3D G3DSA:3.40.50.620 1 153 9.3E-18 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS25925 49841c01b5724460b7d05ec46cb2791b 316 SUPERFAMILY SSF52402 4 153 7.62E-26 T 29-03-2018 CKQ55_RS25925 49841c01b5724460b7d05ec46cb2791b 316 Gene3D G3DSA:3.40.50.620 154 304 1.9E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS25925 49841c01b5724460b7d05ec46cb2791b 316 SUPERFAMILY SSF52402 155 307 1.17E-23 T 29-03-2018 CKQ55_RS25925 49841c01b5724460b7d05ec46cb2791b 316 Pfam PF00582 Universal stress protein family 174 300 2.6E-13 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS25925 49841c01b5724460b7d05ec46cb2791b 316 Pfam PF00582 Universal stress protein family 4 146 1.5E-17 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 8.3E-19 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 Pfam PF14760 Rnk N-terminus 4 43 2.9E-13 T 29-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 SUPERFAMILY SSF54534 49 126 7.85E-17 T 29-03-2018 CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 Gene3D G3DSA:1.10.286.20 3 43 2.7E-14 T 29-03-2018 CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 PIRSF PIRSF006092 21 128 4.3E-23 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 Gene3D G3DSA:3.10.50.30 45 136 2.4E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CKQ55_RS04215 2e9ab25e1e97228abafc8cd888b68515 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.457 T 29-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 CKQ55_RS28985 9e652732895b97d52e7b201aaf88bff2 562 Gene3D G3DSA:3.30.1330.60 413 552 1.7E-34 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS28985 9e652732895b97d52e7b201aaf88bff2 562 SUPERFAMILY SSF103088 412 538 8.24E-33 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS28985 9e652732895b97d52e7b201aaf88bff2 562 Pfam PF00691 OmpA family 438 533 7.8E-15 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS28985 9e652732895b97d52e7b201aaf88bff2 562 PRINTS PR01021 OMPA domain signature 483 499 4.9E-5 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS28985 9e652732895b97d52e7b201aaf88bff2 562 PRINTS PR01021 OMPA domain signature 468 483 4.9E-5 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS21850 1c92d0eb2ece18e0079c8180a4ed0822 312 Gene3D G3DSA:3.20.20.70 1 242 8.1E-46 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS21850 1c92d0eb2ece18e0079c8180a4ed0822 312 Pfam PF01207 Dihydrouridine synthase (Dus) 5 290 2.9E-90 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS21850 1c92d0eb2ece18e0079c8180a4ed0822 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS21850 1c92d0eb2ece18e0079c8180a4ed0822 312 PIRSF PIRSF006621 1 311 5.7E-81 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CKQ55_RS21850 1c92d0eb2ece18e0079c8180a4ed0822 312 SUPERFAMILY SSF51395 1 310 1.63E-71 T 29-03-2018 CKQ55_RS21850 1c92d0eb2ece18e0079c8180a4ed0822 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.528 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CKQ55_RS17905 3985e3a9a025976385abc40b81d48d78 391 Gene3D G3DSA:2.130.10.10 1 386 2.7E-40 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS17905 3985e3a9a025976385abc40b81d48d78 391 Pfam PF14583 Oligogalacturonate lyase 1 384 4.4E-211 T 29-03-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 CKQ55_RS17905 3985e3a9a025976385abc40b81d48d78 391 SUPERFAMILY SSF82171 16 133 1.31E-26 T 29-03-2018 CKQ55_RS17905 3985e3a9a025976385abc40b81d48d78 391 SUPERFAMILY SSF82171 185 380 1.31E-26 T 29-03-2018 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 8.8E-171 T 29-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 4.7E-118 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 Gene3D G3DSA:3.90.1150.10 260 395 1.7E-36 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 PIRSF PIRSF001434 1 395 6.9E-119 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 Gene3D G3DSA:3.40.640.10 4 259 3.0E-39 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS16905 f91733e290118f6d2dea03a60a93e8cf 395 SUPERFAMILY SSF53383 24 393 3.5E-88 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS28860 566033dc481508d8b1be68fe5bb28a08 39 SUPERFAMILY SSF46785 1 38 5.44E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28860 566033dc481508d8b1be68fe5bb28a08 39 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 37 2.3E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS28860 566033dc481508d8b1be68fe5bb28a08 39 Gene3D G3DSA:1.10.10.10 1 39 2.0E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 PIRSF PIRSF000103 1 295 3.8E-95 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 SUPERFAMILY SSF48179 164 293 5.44E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 SUPERFAMILY SSF51735 2 164 3.94E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 Gene3D G3DSA:1.10.1040.10 165 291 1.4E-30 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.662 T 29-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 1.1E-154 T 29-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.6E-51 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 Gene3D G3DSA:3.40.50.720 3 164 4.3E-36 T 29-03-2018 CKQ55_RS16295 bd37e0e17837c4b3def389f7320934b1 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 5.5E-38 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CKQ55_RS22580 e61ffaad0613ae0ba9b61d0d66e44878 209 SMART SM00014 16 143 3.7E-16 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS22580 e61ffaad0613ae0ba9b61d0d66e44878 209 SUPERFAMILY SSF48317 4 155 3.92E-17 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS22580 e61ffaad0613ae0ba9b61d0d66e44878 209 Pfam PF01569 PAP2 superfamily 69 146 5.9E-9 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS22580 e61ffaad0613ae0ba9b61d0d66e44878 209 Gene3D G3DSA:1.20.144.10 68 150 6.5E-8 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS12960 15f74e944832899df344d3f12ef0cd84 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 2.3E-125 T 29-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CKQ55_RS12960 15f74e944832899df344d3f12ef0cd84 346 PIRSF PIRSF002756 1 338 4.1E-105 T 29-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CKQ55_RS12960 15f74e944832899df344d3f12ef0cd84 346 Gene3D G3DSA:3.40.190.10 26 160 1.4E-30 T 29-03-2018 CKQ55_RS12960 15f74e944832899df344d3f12ef0cd84 346 Gene3D G3DSA:3.40.190.10 161 337 1.1E-26 T 29-03-2018 CKQ55_RS12960 15f74e944832899df344d3f12ef0cd84 346 SUPERFAMILY SSF53850 29 335 5.02E-95 T 29-03-2018 CKQ55_RS12960 15f74e944832899df344d3f12ef0cd84 346 Pfam PF12849 PBP superfamily domain 26 307 7.2E-61 T 29-03-2018 IPR024370 PBP domain CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 Gene3D G3DSA:3.30.390.50 250 337 1.4E-23 T 29-03-2018 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 329 1.8E-136 T 29-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.4E-8 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 SUPERFAMILY SSF82649 248 335 1.15E-24 T 29-03-2018 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.33 T 29-03-2018 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 KEGG: 00785+6.3.1.20 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 332 4.7E-18 T 29-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 SUPERFAMILY SSF55681 3 247 7.29E-79 T 29-03-2018 CKQ55_RS08770 e0885b09eea976612faa8613967c71f6 338 Gene3D G3DSA:3.30.930.10 2 249 4.5E-72 T 29-03-2018 CKQ55_RS09670 299615994cee21f6a6de0bd1b10f770a 20 Pfam PF04899 MbeD/MobD like 1 19 1.9E-6 T 29-03-2018 IPR006983 MbeD/MobD-like CKQ55_RS08035 aa537241a2d1f78b2113084ae31fba28 316 SUPERFAMILY SSF75005 5 311 2.42E-69 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS08035 aa537241a2d1f78b2113084ae31fba28 316 PIRSF PIRSF025414 1 316 3.2E-142 T 29-03-2018 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 CKQ55_RS08035 aa537241a2d1f78b2113084ae31fba28 316 Gene3D G3DSA:2.115.10.20 1 316 3.7E-63 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS08035 aa537241a2d1f78b2113084ae31fba28 316 Pfam PF04616 Glycosyl hydrolases family 43 5 306 2.6E-75 T 29-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CKQ55_RS16375 1255deffb05755e44bb5abb343b1128a 433 SUPERFAMILY SSF103473 3 414 2.62E-80 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS16375 1255deffb05755e44bb5abb343b1128a 433 Gene3D G3DSA:1.20.1250.20 214 422 5.9E-25 T 29-03-2018 CKQ55_RS16375 1255deffb05755e44bb5abb343b1128a 433 Pfam PF07690 Major Facilitator Superfamily 16 287 4.7E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS16375 1255deffb05755e44bb5abb343b1128a 433 Pfam PF07690 Major Facilitator Superfamily 301 423 1.3E-8 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS16375 1255deffb05755e44bb5abb343b1128a 433 Gene3D G3DSA:1.20.1250.20 1 202 6.4E-39 T 29-03-2018 CKQ55_RS16375 1255deffb05755e44bb5abb343b1128a 433 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 1.6E-121 T 29-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS15665 e6d9abdbbdd9c2502179992f7a9e61d1 193 Pfam PF02545 Maf-like protein 4 184 5.4E-58 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS15665 e6d9abdbbdd9c2502179992f7a9e61d1 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.266 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS15665 e6d9abdbbdd9c2502179992f7a9e61d1 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 7.0E-68 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS15665 e6d9abdbbdd9c2502179992f7a9e61d1 193 SUPERFAMILY SSF52972 2 184 5.3E-62 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS15665 e6d9abdbbdd9c2502179992f7a9e61d1 193 Gene3D G3DSA:3.90.950.10 1 188 4.6E-69 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS15665 e6d9abdbbdd9c2502179992f7a9e61d1 193 PIRSF PIRSF006305 1 191 7.0E-55 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS27980 f7a25827acf33e66933d9a0dd595bab9 477 SUPERFAMILY SSF53720 2 473 7.2E-140 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS27980 f7a25827acf33e66933d9a0dd595bab9 477 Pfam PF00171 Aldehyde dehydrogenase family 13 466 2.1E-136 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS27980 f7a25827acf33e66933d9a0dd595bab9 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS27980 f7a25827acf33e66933d9a0dd595bab9 477 Gene3D G3DSA:3.40.309.10 270 450 9.7E-59 T 29-03-2018 CKQ55_RS27980 f7a25827acf33e66933d9a0dd595bab9 477 Gene3D G3DSA:3.40.605.10 1 269 4.1E-79 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS21540 d5346e3493f275e9b5f1a4acf8493c51 1139 Pfam PF06744 Type VI secretion protein IcmF C-terminal 865 1062 3.0E-53 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CKQ55_RS21540 d5346e3493f275e9b5f1a4acf8493c51 1139 Pfam PF06761 Intracellular multiplication and human macrophage-killing 418 736 1.6E-66 T 29-03-2018 IPR009612 ImcF-related CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 SUPERFAMILY SSF53720 6 427 6.67E-89 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 Gene3D G3DSA:3.40.50.1980 226 371 6.0E-70 T 29-03-2018 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.2E-100 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 PIRSF PIRSF000099 1 430 1.2E-167 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 Gene3D G3DSA:3.40.50.1980 29 225 6.5E-86 T 29-03-2018 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 1.3E-159 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 40.644 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS22760 9b3f9db49bd5998ef7eaea2bda7bc721 434 Pfam PF00815 Histidinol dehydrogenase 28 427 4.1E-164 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CKQ55_RS00240 2731572d9f0cb56c277f77db99640f47 149 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 13 110 2.5E-9 T 29-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CKQ55_RS00240 2731572d9f0cb56c277f77db99640f47 149 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 144 3.3E-22 T 29-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component CKQ55_RS01010 93bb6cae477ef056b4d7c3492029809b 382 Gene3D G3DSA:1.10.287.470 129 183 7.0E-9 T 29-03-2018 CKQ55_RS01010 93bb6cae477ef056b4d7c3492029809b 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 84 287 1.4E-12 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS01010 93bb6cae477ef056b4d7c3492029809b 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 72 376 4.9E-67 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS01010 93bb6cae477ef056b4d7c3492029809b 382 Gene3D G3DSA:3.90.1170.30 63 128 1.6E-5 T 29-03-2018 CKQ55_RS01010 93bb6cae477ef056b4d7c3492029809b 382 SUPERFAMILY SSF111369 72 302 6.54E-24 T 29-03-2018 CKQ55_RS01010 93bb6cae477ef056b4d7c3492029809b 382 Gene3D G3DSA:2.40.50.100 184 381 2.9E-7 T 29-03-2018 CKQ55_RS24165 66a247ef31263a72256faf6e7be5a0b0 296 Pfam PF07859 alpha/beta hydrolase fold 102 274 2.9E-8 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CKQ55_RS24165 66a247ef31263a72256faf6e7be5a0b0 296 SUPERFAMILY SSF53474 61 296 2.54E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS24165 66a247ef31263a72256faf6e7be5a0b0 296 Gene3D G3DSA:3.40.50.1820 59 296 3.8E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS01110 83211a8c292380e3b7c03aa109e8db25 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.441 T 29-03-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 CKQ55_RS01110 83211a8c292380e3b7c03aa109e8db25 196 SUPERFAMILY SSF55469 13 192 3.93E-43 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS01110 83211a8c292380e3b7c03aa109e8db25 196 Pfam PF00881 Nitroreductase family 18 174 2.2E-13 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CKQ55_RS01110 83211a8c292380e3b7c03aa109e8db25 196 Gene3D G3DSA:3.40.109.10 10 196 1.2E-33 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS10790 322208fc1134e6aa6e36d454769d050f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 9.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS10790 322208fc1134e6aa6e36d454769d050f 198 Gene3D G3DSA:1.10.357.10 5 197 1.7E-22 T 29-03-2018 CKQ55_RS10790 322208fc1134e6aa6e36d454769d050f 198 SUPERFAMILY SSF46689 7 82 4.85E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS10790 322208fc1134e6aa6e36d454769d050f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS10790 322208fc1134e6aa6e36d454769d050f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS00850 658c6e650de500061e7e3da6ecedc3d2 215 SUPERFAMILY SSF46785 90 172 6.67E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00850 658c6e650de500061e7e3da6ecedc3d2 215 SUPERFAMILY SSF46785 2 84 2.29E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00850 658c6e650de500061e7e3da6ecedc3d2 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.2E-63 T 29-03-2018 IPR007432 Protein of unknown function DUF480 CKQ55_RS00850 658c6e650de500061e7e3da6ecedc3d2 215 Gene3D G3DSA:1.10.10.10 2 87 1.2E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00850 658c6e650de500061e7e3da6ecedc3d2 215 Gene3D G3DSA:1.10.10.10 97 171 4.8E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00850 658c6e650de500061e7e3da6ecedc3d2 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.421 T 29-03-2018 IPR007432 Protein of unknown function DUF480 CKQ55_RS27080 4a0abb29eec4577d28d036df47081a6c 214 SUPERFAMILY SSF48613 3 212 7.79E-44 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CKQ55_RS27080 4a0abb29eec4577d28d036df47081a6c 214 Pfam PF03070 TENA/THI-4/PQQC family 10 213 6.6E-21 T 29-03-2018 IPR004305 Thiaminase-2/PQQC CKQ55_RS27080 4a0abb29eec4577d28d036df47081a6c 214 PIRSF PIRSF003170 1 214 1.3E-39 T 29-03-2018 IPR026285 TenA_E protein CKQ55_RS27080 4a0abb29eec4577d28d036df47081a6c 214 Gene3D G3DSA:1.20.910.10 8 212 4.3E-35 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CKQ55_RS09760 04f853bb9de4114aa05df2d656641d78 405 Pfam PF00557 Metallopeptidase family M24 169 382 3.0E-24 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS09760 04f853bb9de4114aa05df2d656641d78 405 Gene3D G3DSA:3.40.350.10 2 156 2.4E-21 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CKQ55_RS09760 04f853bb9de4114aa05df2d656641d78 405 Gene3D G3DSA:3.90.230.10 157 402 8.7E-42 T 29-03-2018 CKQ55_RS09760 04f853bb9de4114aa05df2d656641d78 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 27 158 2.1E-14 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CKQ55_RS09760 04f853bb9de4114aa05df2d656641d78 405 SUPERFAMILY SSF53092 3 156 5.58E-39 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CKQ55_RS09760 04f853bb9de4114aa05df2d656641d78 405 SUPERFAMILY SSF55920 158 398 7.59E-60 T 29-03-2018 IPR000994 Peptidase M24 CKQ55_RS12760 82bc57be1f03901f8b7f6e8c2758b320 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.358 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CKQ55_RS12760 82bc57be1f03901f8b7f6e8c2758b320 210 SUPERFAMILY SSF52540 12 197 1.35E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12760 82bc57be1f03901f8b7f6e8c2758b320 210 Gene3D G3DSA:3.40.50.300 7 208 5.7E-28 T 29-03-2018 CKQ55_RS12760 82bc57be1f03901f8b7f6e8c2758b320 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 8.2E-76 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CKQ55_RS12760 82bc57be1f03901f8b7f6e8c2758b320 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 2.3E-20 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS18455 74b79a1c9e03f1d6c1078638231f33ab 140 SUPERFAMILY SSF102546 1 139 9.68E-39 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CKQ55_RS18455 74b79a1c9e03f1d6c1078638231f33ab 140 Pfam PF05025 RbsD / FucU transport protein family 3 139 1.2E-35 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CKQ55_RS18455 74b79a1c9e03f1d6c1078638231f33ab 140 Gene3D G3DSA:3.40.1650.10 1 140 2.2E-47 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CKQ55_RS18455 74b79a1c9e03f1d6c1078638231f33ab 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 46.419 T 29-03-2018 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 CKQ55_RS25430 d392378106a1a075126fffcd9d11d931 319 SUPERFAMILY SSF161098 88 304 9.55E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25430 d392378106a1a075126fffcd9d11d931 319 Gene3D G3DSA:1.10.3720.10 1 305 8.5E-44 T 29-03-2018 CKQ55_RS25430 d392378106a1a075126fffcd9d11d931 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 316 1.4E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS26275 3d58907d114952a5297e178d2d5789e4 158 Gene3D G3DSA:2.40.50.140 1 70 2.5E-14 T 29-03-2018 CKQ55_RS26275 3d58907d114952a5297e178d2d5789e4 158 SUPERFAMILY SSF50249 2 62 2.01E-10 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS26275 3d58907d114952a5297e178d2d5789e4 158 Pfam PF00313 'Cold-shock' DNA-binding domain 2 61 7.9E-9 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 9.2E-18 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 Gene3D G3DSA:1.10.10.10 6 106 2.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 29-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.5E-25 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 1.5E-25 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.5E-25 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.5E-25 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 SUPERFAMILY SSF46785 3 103 2.98E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17630 a1961c6daa93b48ab0e33263432a3093 116 SMART SM00418 7 85 6.8E-29 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS13780 b76ff95e979bf3805e32570a7843d8e0 323 Gene3D G3DSA:3.40.50.2000 164 320 1.2E-34 T 29-03-2018 CKQ55_RS13780 b76ff95e979bf3805e32570a7843d8e0 323 Gene3D G3DSA:3.40.50.2000 1 163 8.9E-42 T 29-03-2018 CKQ55_RS13780 b76ff95e979bf3805e32570a7843d8e0 323 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 317 4.2E-131 T 29-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 CKQ55_RS13780 b76ff95e979bf3805e32570a7843d8e0 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 299 2.5E-78 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CKQ55_RS13780 b76ff95e979bf3805e32570a7843d8e0 323 SUPERFAMILY SSF53756 1 316 1.38E-75 T 29-03-2018 CKQ55_RS23320 bc1c00910772d2c805331c7e84f61d78 135 SUPERFAMILY SSF51182 14 133 1.6E-30 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS23320 bc1c00910772d2c805331c7e84f61d78 135 Gene3D G3DSA:2.60.120.10 13 135 4.8E-31 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS23320 bc1c00910772d2c805331c7e84f61d78 135 Pfam PF07883 Cupin domain 43 103 1.9E-8 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS05705 2382b26d4124e2117c4af24f507809cf 387 Gene3D G3DSA:1.10.150.130 55 185 2.9E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS05705 2382b26d4124e2117c4af24f507809cf 387 SUPERFAMILY SSF56349 58 111 2.94E-50 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS05705 2382b26d4124e2117c4af24f507809cf 387 SUPERFAMILY SSF56349 139 361 2.94E-50 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS05705 2382b26d4124e2117c4af24f507809cf 387 Gene3D G3DSA:1.10.443.10 186 367 8.3E-40 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS05705 2382b26d4124e2117c4af24f507809cf 387 Pfam PF00589 Phage integrase family 185 353 4.9E-41 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 185 1.5E-17 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 SUPERFAMILY SSF117916 203 273 2.4E-16 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 Pfam PF01592 NifU-like N terminal domain 4 125 7.1E-46 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 Gene3D G3DSA:3.90.1010.10 1 158 8.8E-55 T 29-03-2018 CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 274 1.3E-146 T 29-03-2018 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 Gene3D G3DSA:3.30.300.130 200 274 2.0E-15 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 PIRSF PIRSF000375 1 274 3.4E-119 T 29-03-2018 IPR016217 Nitrogen fixation, NifU CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 Pfam PF01106 NifU-like domain 210 271 8.3E-17 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 SUPERFAMILY SSF82649 2 131 1.91E-40 T 29-03-2018 CKQ55_RS22835 3cf2be4a101a6a5f30aa32b6c74c4ed3 274 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 214 264 3.0E-22 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CKQ55_RS26200 e8368be60d3264da342b676d664fdbbf 186 Pfam PF13302 Acetyltransferase (GNAT) domain 7 140 1.8E-20 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS26200 e8368be60d3264da342b676d664fdbbf 186 Gene3D G3DSA:3.40.630.30 5 174 2.6E-33 T 29-03-2018 CKQ55_RS26200 e8368be60d3264da342b676d664fdbbf 186 SUPERFAMILY SSF55729 6 164 9.62E-41 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 SMART SM00358 156 224 1.6E-23 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 SUPERFAMILY SSF54768 109 223 1.34E-27 T 29-03-2018 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 SUPERFAMILY SSF69065 5 159 3.66E-50 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.512 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 Pfam PF14622 Ribonuclease-III-like 20 141 2.7E-34 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 SMART SM00535 21 149 1.5E-57 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.5E-74 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 Gene3D G3DSA:3.30.160.20 148 226 5.4E-21 T 29-03-2018 CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 1.4E-14 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CKQ55_RS19955 27ef6b2948aa3d4614f24b280dd8b498 226 Gene3D G3DSA:1.10.1520.10 5 147 1.1E-44 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 60.356 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 SUPERFAMILY SSF51556 8 346 5.57E-147 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 PIRSF PIRSF001237 4 348 9.8E-139 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 Gene3D G3DSA:3.20.20.140 14 348 5.3E-57 T 29-03-2018 CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 1.7E-157 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CKQ55_RS00875 a45a0683347734c3e1a0e6451a78ece7 348 Pfam PF01979 Amidohydrolase family 15 313 2.9E-21 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS07255 8b94fc5a2f264f5d2d93ea0876ab1df5 132 Pfam PF07417 Transcriptional regulator Crl 6 122 5.0E-52 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CKQ55_RS07255 8b94fc5a2f264f5d2d93ea0876ab1df5 132 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 31.555 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CKQ55_RS03465 9fc03781262b581819a96684d461d1ca 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.225 T 29-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CKQ55_RS03465 9fc03781262b581819a96684d461d1ca 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 47 3.0E-30 T 29-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CKQ55_RS07515 5f241a1406ad49b2b0433e9e4cad7926 129 SUPERFAMILY SSF54593 3 128 2.28E-34 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS07515 5f241a1406ad49b2b0433e9e4cad7926 129 Gene3D G3DSA:3.10.180.10 1 129 1.4E-30 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS07515 5f241a1406ad49b2b0433e9e4cad7926 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 5.4E-23 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 SUPERFAMILY SSF53383 2 461 7.97E-148 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 Hamap MF_00544 Tryptophanase [tnaA]. 1 461 104.033 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 251 269 - T 29-03-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 PIRSF PIRSF001386 1 462 3.3E-227 T 29-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 Gene3D G3DSA:3.90.1150.10 277 459 2.3E-75 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 Gene3D G3DSA:3.90.1150.10 17 136 5.2E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 2 461 1.2E-257 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CKQ55_RS09390 045c71f4dfd59112d1253d5d26ab0e09 462 Pfam PF01212 Beta-eliminating lyase 46 427 2.5E-99 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 Gene3D G3DSA:3.30.70.240 136 199 2.5E-19 T 29-03-2018 CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 SUPERFAMILY SSF54211 3 131 2.81E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 203 9.3E-82 T 29-03-2018 IPR015796 Impact family, bacterial/archaeal CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 1.2E-16 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.0E-26 T 29-03-2018 IPR001498 Impact, N-terminal CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 29-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 SUPERFAMILY SSF54980 136 204 7.91E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like CKQ55_RS11670 16741cb0b1a19599d008b272042f64a8 204 Gene3D G3DSA:3.30.230.30 8 133 1.9E-36 T 29-03-2018 IPR001498 Impact, N-terminal CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.4E-53 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 SUPERFAMILY SSF54919 1 141 2.1E-58 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 29-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 SMART SM00562 3 140 4.1E-85 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.3E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.3E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.3E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.3E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.3E-40 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.7 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS20190 eb2011635bbace797af8f7fe8bf963b0 143 Gene3D G3DSA:3.30.70.141 1 141 1.7E-52 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CKQ55_RS13465 206660b9dc57c672c128302e1dde429f 155 Hamap MF_00775 UPF0311 protein . 3 155 20.317 T 29-03-2018 IPR020915 Uncharacterised protein family UPF0311 CKQ55_RS13465 206660b9dc57c672c128302e1dde429f 155 Pfam PF11578 Protein of unknown function (DUF3237) 3 154 2.4E-35 T 29-03-2018 IPR020915 Uncharacterised protein family UPF0311 CKQ55_RS13465 206660b9dc57c672c128302e1dde429f 155 Gene3D G3DSA:2.40.160.20 1 155 8.5E-41 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS25560 cab6f4eab1676d24547d52bda83e87c7 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 3.2E-123 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS25560 cab6f4eab1676d24547d52bda83e87c7 457 PIRSF PIRSF006603 7 455 4.2E-58 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS25560 cab6f4eab1676d24547d52bda83e87c7 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 51.855 T 29-03-2018 IPR022913 Multidrug resistance protein MdtK CKQ55_RS25560 cab6f4eab1676d24547d52bda83e87c7 457 Pfam PF01554 MatE 244 405 1.2E-36 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS25560 cab6f4eab1676d24547d52bda83e87c7 457 Pfam PF01554 MatE 17 177 2.3E-41 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 SUPERFAMILY SSF49303 228 341 7.77E-22 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 SUPERFAMILY SSF51445 343 632 8.09E-99 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 343 636 2.4E-113 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 393 418 - T 29-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Pfam PF16353 Domain of unknown function(DUF4981) 648 734 6.2E-17 T 29-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 455 469 - T 29-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Pfam PF00703 Glycosyl hydrolases family 2 228 341 1.9E-10 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 SMART SM01038 760 1033 2.4E-111 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Gene3D G3DSA:2.60.120.260 8 225 1.4E-63 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Gene3D G3DSA:3.20.20.80 342 632 3.3E-85 T 29-03-2018 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Gene3D G3DSA:2.70.98.10 746 1035 6.1E-77 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 SUPERFAMILY SSF74650 747 1033 1.22E-89 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 539 554 1.4E-38 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 352 366 1.4E-38 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 153 168 1.4E-38 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 383 401 1.4E-38 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 455 470 1.4E-38 T 29-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 SUPERFAMILY SSF49303 629 738 1.49E-26 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Gene3D G3DSA:2.60.40.10 633 737 7.6E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Pfam PF02929 Beta galactosidase small chain 764 1032 5.4E-60 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 59 225 5.7E-62 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Gene3D G3DSA:2.60.40.10 227 341 4.6E-17 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 SUPERFAMILY SSF49785 21 225 1.26E-64 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS26315 4541eb0faa072afb3934eb11b6aa4cfc 1035 Hamap MF_01687 Beta-galactosidase [lacZ]. 12 1035 17.104 T 29-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS14720 51c62e690b3d5d890c52c97a89377e1a 81 SUPERFAMILY SSF64307 5 79 8.24E-27 T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS14720 51c62e690b3d5d890c52c97a89377e1a 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS14720 51c62e690b3d5d890c52c97a89377e1a 81 Gene3D G3DSA:3.30.110.40 4 81 3.6E-30 T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS14720 51c62e690b3d5d890c52c97a89377e1a 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.266 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 CKQ55_RS14720 51c62e690b3d5d890c52c97a89377e1a 81 Pfam PF01206 Sulfurtransferase TusA 10 79 1.1E-25 T 29-03-2018 IPR001455 TusA-like domain CKQ55_RS13850 865335ca81daaa46fc8e93576a86a584 157 PIRSF PIRSF029256 1 154 1.0E-69 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS13850 865335ca81daaa46fc8e93576a86a584 157 Gene3D G3DSA:3.40.1280.10 1 156 1.6E-37 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS13850 865335ca81daaa46fc8e93576a86a584 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.096 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS13850 865335ca81daaa46fc8e93576a86a584 157 SUPERFAMILY SSF75217 1 152 5.43E-46 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS13850 865335ca81daaa46fc8e93576a86a584 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.1E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CKQ55_RS13850 865335ca81daaa46fc8e93576a86a584 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 7.0E-73 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 Gene3D G3DSA:1.10.1780.10 1 161 4.8E-31 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 238 350 1.5E-8 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 SUPERFAMILY SSF81923 12 124 7.06E-19 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 329 341 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 Gene3D G3DSA:3.40.50.300 192 377 1.5E-21 T 29-03-2018 CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 SUPERFAMILY SSF52540 194 380 1.75E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21495 d8b17f71202f0c26a73923788256724f 382 SMART SM00382 233 378 3.6E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14660 2e7253cdd622b88f6ee47df6495cfd82 449 Gene3D G3DSA:3.40.50.980 141 295 2.8E-17 T 29-03-2018 CKQ55_RS14660 2e7253cdd622b88f6ee47df6495cfd82 449 Gene3D G3DSA:3.30.300.30 345 449 2.5E-16 T 29-03-2018 CKQ55_RS14660 2e7253cdd622b88f6ee47df6495cfd82 449 Gene3D G3DSA:3.40.50.980 5 91 6.4E-7 T 29-03-2018 CKQ55_RS14660 2e7253cdd622b88f6ee47df6495cfd82 449 SUPERFAMILY SSF56801 23 447 1.22E-53 T 29-03-2018 CKQ55_RS14660 2e7253cdd622b88f6ee47df6495cfd82 449 Gene3D G3DSA:3.40.50.980 92 140 0.0081 T 29-03-2018 CKQ55_RS14660 2e7253cdd622b88f6ee47df6495cfd82 449 Pfam PF00501 AMP-binding enzyme 130 291 1.4E-10 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.0E-104 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 PIRSF PIRSF039102 41 306 4.4E-92 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 PIRSF PIRSF039102 1 44 1.2E-8 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 Gene3D G3DSA:3.40.50.20 1 106 1.7E-30 T 29-03-2018 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 Gene3D G3DSA:3.30.1490.20 111 171 2.8E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 35.298 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 7.3E-66 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 1.5E-17 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 SUPERFAMILY SSF56059 97 302 3.54E-55 T 29-03-2018 CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 SUPERFAMILY SSF52440 3 96 1.15E-28 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS08125 96e33aa8ba360512315ae5f00f9d0cb1 306 Gene3D G3DSA:3.30.470.20 172 306 1.1E-35 T 29-03-2018 CKQ55_RS01865 9867d2948ecdbe7e699a9bf2d0bbb256 137 SUPERFAMILY SSF51735 4 135 7.0E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS01865 9867d2948ecdbe7e699a9bf2d0bbb256 137 SMART SM00881 9 104 6.5E-27 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CKQ55_RS01865 9867d2948ecdbe7e699a9bf2d0bbb256 137 Gene3D G3DSA:3.40.50.720 10 134 3.8E-33 T 29-03-2018 CKQ55_RS01865 9867d2948ecdbe7e699a9bf2d0bbb256 137 Pfam PF13380 CoA binding domain 14 130 3.2E-39 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CKQ55_RS26745 39e5d71173ceb796be434f0bff80fef3 439 Pfam PF02378 Phosphotransferase system, EIIC 33 351 1.9E-57 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS26745 39e5d71173ceb796be434f0bff80fef3 439 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 424 7.6E-131 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS26745 39e5d71173ceb796be434f0bff80fef3 439 PIRSF PIRSF006351 1 433 3.6E-135 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS26745 39e5d71173ceb796be434f0bff80fef3 439 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 424 7.6E-131 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS19025 fca42f743da33f9aa234a0d9c6638e0d 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 8.7E-20 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS19025 fca42f743da33f9aa234a0d9c6638e0d 104 SUPERFAMILY SSF52794 1 103 1.12E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS19025 fca42f743da33f9aa234a0d9c6638e0d 104 Gene3D G3DSA:3.40.50.2300 2 104 3.2E-35 T 29-03-2018 CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 SMART SM00382 223 429 3.6E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 2.3E-37 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 Gene3D G3DSA:1.10.860.10 17 169 6.7E-49 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 3.4E-111 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 SUPERFAMILY SSF48024 25 136 2.22E-39 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 2.9E-175 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 Gene3D G3DSA:3.40.50.300 187 471 3.4E-64 T 29-03-2018 CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 SUPERFAMILY SSF52540 204 275 4.7E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11115 f87942a7056e902c11ba04d74d5f2747 471 SUPERFAMILY SSF52540 302 456 4.7E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 4.4E-267 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.4E-65 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 Gene3D G3DSA:3.40.50.300 1 285 5.5E-130 T 29-03-2018 CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 Gene3D G3DSA:3.40.50.880 286 543 2.3E-77 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 Pfam PF06418 CTP synthase N-terminus 5 266 1.4E-126 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 SUPERFAMILY SSF52540 3 269 7.36E-123 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 SUPERFAMILY SSF52317 289 542 4.03E-89 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS18595 8c57da7e83097bf9d95398d6f01eb25e 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.596 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CKQ55_RS07890 482c9140df12fafe85f13916c1a0b0fb 359 Gene3D G3DSA:2.60.40.1090 212 359 1.5E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07890 482c9140df12fafe85f13916c1a0b0fb 359 SUPERFAMILY SSF49401 220 358 1.64E-16 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS07890 482c9140df12fafe85f13916c1a0b0fb 359 Pfam PF00419 Fimbrial protein 211 358 8.5E-13 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 313 457 3.7E-41 T 29-03-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 Gene3D G3DSA:3.40.1080.10 226 485 5.0E-50 T 29-03-2018 CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 SUPERFAMILY SSF100950 2 215 6.09E-59 T 29-03-2018 CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 SUPERFAMILY SSF100950 222 486 3.1E-71 T 29-03-2018 CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 2 486 4.2E-225 T 29-03-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 2 209 4.9E-69 T 29-03-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CKQ55_RS17280 e60185f87fa4f7808453f295c326fd04 488 Gene3D G3DSA:3.40.1080.10 1 214 1.9E-33 T 29-03-2018 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 Pfam PF07687 Peptidase dimerisation domain 187 283 2.3E-12 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 Pfam PF01546 Peptidase family M20/M25/M40 75 384 5.7E-31 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 PIRSF PIRSF005962 1 389 4.8E-116 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 SUPERFAMILY SSF55031 185 296 1.96E-27 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 SUPERFAMILY SSF53187 4 199 2.2E-80 T 29-03-2018 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 SUPERFAMILY SSF53187 300 388 2.2E-80 T 29-03-2018 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 Gene3D G3DSA:3.40.630.10 2 248 2.2E-45 T 29-03-2018 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 Gene3D G3DSA:3.40.630.10 253 389 6.4E-20 T 29-03-2018 CKQ55_RS29335 f380268c5dfb98f22fb6ef1f36af75c6 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 375 1.4E-100 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 Gene3D G3DSA:1.10.1740.10 7 80 1.4E-9 T 29-03-2018 CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 SUPERFAMILY SSF88659 103 178 6.35E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 Gene3D G3DSA:1.10.10.10 104 182 5.8E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 176 6.1E-22 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 Pfam PF04542 Sigma-70 region 2 17 77 1.1E-7 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 Pfam PF08281 Sigma-70, region 4 120 169 1.5E-11 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS27370 958ef5af4373b5328c4bf200e10eba1e 186 SUPERFAMILY SSF88946 16 94 1.96E-10 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.0E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 Pfam PF03466 LysR substrate binding domain 93 292 3.9E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 Gene3D G3DSA:3.40.190.10 183 271 9.9E-21 T 29-03-2018 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 Gene3D G3DSA:1.10.10.10 1 92 3.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 8.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 8.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 SUPERFAMILY SSF46785 7 92 9.58E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 Gene3D G3DSA:3.40.190.10 94 182 3.5E-17 T 29-03-2018 CKQ55_RS20690 a281cbec32906fe9135e3b5fa17620d2 294 SUPERFAMILY SSF53850 94 293 1.71E-32 T 29-03-2018 CKQ55_RS28705 2fa1e244dc97853ad43426878a4f1fee 206 SUPERFAMILY SSF46894 132 195 8.5E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS28705 2fa1e244dc97853ad43426878a4f1fee 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 7.2E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS28705 2fa1e244dc97853ad43426878a4f1fee 206 SMART SM00421 135 192 2.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS28705 2fa1e244dc97853ad43426878a4f1fee 206 Gene3D G3DSA:1.10.10.10 31 204 3.2E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 SUPERFAMILY SSF56024 5 165 3.81E-39 T 29-03-2018 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 SMART SM00155 286 313 8.4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 SMART SM00155 108 135 1.8E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 Pfam PF13091 PLD-like domain 215 338 5.7E-25 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 Pfam PF13091 PLD-like domain 25 152 3.5E-14 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 SUPERFAMILY SSF56024 186 360 4.26E-39 T 29-03-2018 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 384 51.768 T 29-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 Gene3D G3DSA:3.30.870.10 2 182 7.5E-29 T 29-03-2018 CKQ55_RS03255 cfa989fc81f775730162b635f39ae1d0 414 Gene3D G3DSA:3.30.870.10 198 361 1.6E-28 T 29-03-2018 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 606 693 1.5E-7 T 29-03-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 235 1.4E-40 T 29-03-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 Gene3D G3DSA:2.60.40.1180 590 707 1.7E-15 T 29-03-2018 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 SUPERFAMILY SSF51445 289 620 1.96E-108 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 Pfam PF02065 Melibiase 255 592 3.0E-118 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 Gene3D G3DSA:2.70.98.60 1 273 7.8E-62 T 29-03-2018 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PIRSF PIRSF005536 1 707 1.5E-237 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 Gene3D G3DSA:3.20.20.70 275 589 3.9E-54 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 29-03-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS12525 7880c40c7626eb55f3f4cc15097236b2 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 4.3E-62 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 CKQ55_RS15595 4625969675ea58eef81f04550fa8d93c 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 1.5E-122 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CKQ55_RS15595 4625969675ea58eef81f04550fa8d93c 293 PIRSF PIRSF000401 1 293 4.6E-93 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CKQ55_RS15595 4625969675ea58eef81f04550fa8d93c 293 Gene3D G3DSA:3.40.50.150 99 291 1.8E-31 T 29-03-2018 CKQ55_RS15595 4625969675ea58eef81f04550fa8d93c 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.788 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CKQ55_RS15595 4625969675ea58eef81f04550fa8d93c 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.3E-103 T 29-03-2018 CKQ55_RS15595 4625969675ea58eef81f04550fa8d93c 293 SUPERFAMILY SSF53335 44 289 5.43E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 1.4E-24 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 Gene3D G3DSA:1.10.150.130 5 111 1.6E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 Gene3D G3DSA:1.10.443.10 112 292 3.9E-51 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 Pfam PF00589 Phage integrase family 113 284 8.5E-56 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 1.1E-119 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 SUPERFAMILY SSF56349 106 296 1.53E-59 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 59.507 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 SUPERFAMILY SSF47823 4 100 2.94E-35 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CKQ55_RS17455 61e73346602d144635a6ddb249d60d09 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 65.043 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CKQ55_RS25065 f81cd1989e6b51a91afda602d65c02be 198 Pfam PF05995 Cysteine dioxygenase type I 1 159 3.5E-10 T 29-03-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 CKQ55_RS25065 f81cd1989e6b51a91afda602d65c02be 198 Gene3D G3DSA:2.60.120.10 45 187 3.7E-30 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS25065 f81cd1989e6b51a91afda602d65c02be 198 Gene3D G3DSA:1.20.5.440 4 44 7.0E-9 T 29-03-2018 CKQ55_RS25065 f81cd1989e6b51a91afda602d65c02be 198 SUPERFAMILY SSF51182 8 195 6.48E-54 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS12290 9dcfb18542c06c3c7c81d0fa6d2dacf1 322 Pfam PF05036 Sporulation related domain 249 315 1.3E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS12290 9dcfb18542c06c3c7c81d0fa6d2dacf1 322 Hamap MF_02039 Cell division protein FtsN [ftsN]. 39 322 33.3 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CKQ55_RS12290 9dcfb18542c06c3c7c81d0fa6d2dacf1 322 SUPERFAMILY SSF110997 247 317 1.31E-18 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS12290 9dcfb18542c06c3c7c81d0fa6d2dacf1 322 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 318 9.7E-91 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CKQ55_RS12290 9dcfb18542c06c3c7c81d0fa6d2dacf1 322 Gene3D G3DSA:3.30.70.1070 244 319 2.3E-14 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS24065 b891a65de80507d5aeb5d403ff819ce6 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.5E-25 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CKQ55_RS24065 b891a65de80507d5aeb5d403ff819ce6 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.902 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CKQ55_RS24065 b891a65de80507d5aeb5d403ff819ce6 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 9.0E-37 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CKQ55_RS24065 b891a65de80507d5aeb5d403ff819ce6 89 Gene3D G3DSA:3.30.1070.10 1 83 2.8E-29 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CKQ55_RS24065 b891a65de80507d5aeb5d403ff819ce6 89 SUPERFAMILY SSF55229 32 85 1.44E-18 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CKQ55_RS24730 704184ce5ed5586c2b9b72faf20958f7 165 Pfam PF03703 Bacterial PH domain 80 151 3.9E-14 T 29-03-2018 IPR005182 Domain of unknown function DUF304 CKQ55_RS02845 67797d81d7ae6fcd1048ec4c9d023e15 103 Pfam PF16083 LydA holin phage, holin superfamily III 18 94 3.2E-21 T 29-03-2018 IPR032126 LydA-like holin CKQ55_RS05520 67797d81d7ae6fcd1048ec4c9d023e15 103 Pfam PF16083 LydA holin phage, holin superfamily III 18 94 3.2E-21 T 29-03-2018 IPR032126 LydA-like holin CKQ55_RS08965 1dcc527ca88ece7f5463ac09b65ba522 140 SUPERFAMILY SSF53062 1 129 9.55E-33 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS08965 1dcc527ca88ece7f5463ac09b65ba522 140 Pfam PF03610 PTS system fructose IIA component 6 114 1.7E-14 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS08965 1dcc527ca88ece7f5463ac09b65ba522 140 Gene3D G3DSA:3.40.50.510 1 140 4.7E-33 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 Gene3D G3DSA:3.20.20.80 4 396 6.5E-70 T 29-03-2018 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 SUPERFAMILY SSF51445 6 375 2.34E-88 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 Pfam PF00128 Alpha amylase, catalytic domain 31 368 2.3E-22 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 SMART SM00642 4 402 2.7E-54 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 PIRSF PIRSF001021 1 494 4.8E-207 T 29-03-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 Gene3D G3DSA:2.60.40.1180 407 495 8.2E-30 T 29-03-2018 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 SUPERFAMILY SSF51011 405 491 5.54E-28 T 29-03-2018 CKQ55_RS23445 221a5e59cff794d07e5dfecd482c4cd6 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 415 490 9.0E-5 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS08380 e0b38fab49b1c1a41388692823f609c1 125 Gene3D G3DSA:2.60.40.1470 3 125 3.1E-41 T 29-03-2018 IPR007474 ApaG domain CKQ55_RS08380 e0b38fab49b1c1a41388692823f609c1 125 Pfam PF04379 ApaG domain 18 102 3.5E-32 T 29-03-2018 IPR007474 ApaG domain CKQ55_RS08380 e0b38fab49b1c1a41388692823f609c1 125 SUPERFAMILY SSF110069 5 125 1.96E-46 T 29-03-2018 IPR007474 ApaG domain CKQ55_RS08380 e0b38fab49b1c1a41388692823f609c1 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 32.054 T 29-03-2018 IPR023065 Uncharacterised protein family ApaG CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 SUPERFAMILY SSF52540 273 337 4.51E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 SUPERFAMILY SSF52540 480 651 4.51E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 2.6E-19 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 SUPERFAMILY SSF52540 124 364 2.48E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 SMART SM00490 517 601 3.9E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 4.2E-157 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 SMART SM00487 150 342 3.1E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.277 T 29-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 Pfam PF00271 Helicase conserved C-terminal domain 496 601 3.4E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 Gene3D G3DSA:3.40.50.300 484 956 1.3E-22 T 29-03-2018 CKQ55_RS08325 95adc86f3eaf7633c1ffc4550567fd4d 968 Gene3D G3DSA:3.40.50.10810 130 355 3.1E-26 T 29-03-2018 CKQ55_RS09785 c0957e4786a95e2fa347be604d2440a6 200 Gene3D G3DSA:1.10.3540.10 5 196 6.6E-50 T 29-03-2018 CKQ55_RS09785 c0957e4786a95e2fa347be604d2440a6 200 Pfam PF08849 Putative inner membrane protein (DUF1819) 7 186 6.9E-50 T 29-03-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 Pfam PF01578 Cytochrome C assembly protein 89 296 8.7E-54 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.0E-94 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 9.2E-57 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 3.1E-281 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19540 5c359d5885aac2a333aff571d6727df0 645 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 9.9E-120 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.8E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.8E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.8E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.8E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.8E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 Gene3D G3DSA:3.40.50.720 3 248 1.2E-54 T 29-03-2018 CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 SUPERFAMILY SSF51735 6 233 4.25E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS29140 88e8337b0b3c64d9b70dbc82fd3e1db5 250 Pfam PF00106 short chain dehydrogenase 7 187 5.8E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS23770 376191af6f547ac2151746acd6dc5832 226 Gene3D G3DSA:1.10.3680.10 76 225 8.3E-14 T 29-03-2018 IPR029024 TerB-like CKQ55_RS23770 376191af6f547ac2151746acd6dc5832 226 Pfam PF04391 Protein of unknown function (DUF533) 33 216 3.0E-50 T 29-03-2018 IPR007486 Inner membrane protein YebE CKQ55_RS23770 376191af6f547ac2151746acd6dc5832 226 SUPERFAMILY SSF158682 100 219 1.57E-16 T 29-03-2018 CKQ55_RS12410 1fa7eb8eb2eded50c0d5a4558585a2a1 104 Gene3D G3DSA:3.30.70.100 2 101 4.0E-5 T 29-03-2018 CKQ55_RS12410 1fa7eb8eb2eded50c0d5a4558585a2a1 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 5.3E-56 T 29-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CKQ55_RS12410 1fa7eb8eb2eded50c0d5a4558585a2a1 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.447 T 29-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CKQ55_RS12410 1fa7eb8eb2eded50c0d5a4558585a2a1 104 SUPERFAMILY SSF54909 1 103 8.58E-38 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS12410 1fa7eb8eb2eded50c0d5a4558585a2a1 104 Pfam PF05336 L-rhamnose mutarotase 3 103 1.1E-28 T 29-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 1 78 8.2E-29 T 29-03-2018 CKQ55_RS00770 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 SUPERFAMILY SSF54106 97 140 1.57E-5 T 29-03-2018 IPR018392 LysM domain CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 Gene3D G3DSA:2.70.70.10 280 437 1.1E-44 T 29-03-2018 CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 8.7E-9 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 Gene3D G3DSA:3.10.350.10 86 171 1.2E-7 T 29-03-2018 CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 Pfam PF01476 LysM domain 99 142 2.1E-8 T 29-03-2018 IPR018392 LysM domain CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 SUPERFAMILY SSF51261 167 408 5.75E-69 T 29-03-2018 IPR011055 Duplicated hybrid motif CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 SMART SM00257 98 143 1.1E-6 T 29-03-2018 IPR018392 LysM domain CKQ55_RS23705 87c16aea891f5272dd101700ca8702aa 440 Pfam PF01551 Peptidase family M23 313 407 2.0E-32 T 29-03-2018 IPR016047 Peptidase M23 CKQ55_RS23830 96773425d6d11b9ae8fbcad96314c22a 314 Pfam PF04393 Protein of unknown function (DUF535) 33 310 3.7E-98 T 29-03-2018 IPR007488 Protein of unknown function DUF535 CKQ55_RS20300 942e95ab24c4e33904b4c1a2be09057f 557 Gene3D G3DSA:3.20.20.80 11 324 1.8E-42 T 29-03-2018 CKQ55_RS20300 942e95ab24c4e33904b4c1a2be09057f 557 SUPERFAMILY SSF51445 65 416 6.53E-9 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 Pfam PF00155 Aminotransferase class I and II 44 348 3.7E-65 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 Gene3D G3DSA:3.90.1150.10 2 64 1.7E-6 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 54.848 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 Gene3D G3DSA:3.90.1150.10 242 350 1.7E-15 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 Gene3D G3DSA:3.40.640.10 65 241 5.1E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 349 8.9E-123 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CKQ55_RS22755 c063f5fef3eda393435ff4c269ee58fb 353 SUPERFAMILY SSF53383 5 349 2.13E-79 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS28230 64d59f6974a134c3d11453ae0cf14f15 263 Gene3D G3DSA:1.10.3620.10 147 251 4.9E-38 T 29-03-2018 CKQ55_RS28230 64d59f6974a134c3d11453ae0cf14f15 263 Pfam PF02698 DUF218 domain 37 172 3.1E-15 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CKQ55_RS14535 fe3842731b962e3b0ca340e401e1a48e 253 SMART SM00382 28 218 4.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14535 fe3842731b962e3b0ca340e401e1a48e 253 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14535 fe3842731b962e3b0ca340e401e1a48e 253 SUPERFAMILY SSF52540 14 241 1.01E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14535 fe3842731b962e3b0ca340e401e1a48e 253 Pfam PF00005 ABC transporter 20 168 1.5E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14535 fe3842731b962e3b0ca340e401e1a48e 253 Gene3D G3DSA:3.40.50.300 1 246 2.9E-53 T 29-03-2018 CKQ55_RS14535 fe3842731b962e3b0ca340e401e1a48e 253 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 9.4E-103 T 29-03-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 CKQ55_RS27875 6e93bfd4838eedbf6ae337c83a09af27 312 SUPERFAMILY SSF53850 63 295 2.17E-43 T 29-03-2018 CKQ55_RS27875 6e93bfd4838eedbf6ae337c83a09af27 312 SUPERFAMILY SSF53850 6 25 2.17E-43 T 29-03-2018 CKQ55_RS27875 6e93bfd4838eedbf6ae337c83a09af27 312 Gene3D G3DSA:3.40.190.10 38 176 7.6E-23 T 29-03-2018 CKQ55_RS27875 6e93bfd4838eedbf6ae337c83a09af27 312 Gene3D G3DSA:3.40.190.10 177 305 3.8E-14 T 29-03-2018 CKQ55_RS27875 6e93bfd4838eedbf6ae337c83a09af27 312 SMART SM00062 65 297 3.7E-25 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS27875 6e93bfd4838eedbf6ae337c83a09af27 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 296 3.9E-39 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS26290 dfab22db49fc8c13f55c01ae6796cb0b 90 SUPERFAMILY SSF69047 15 67 4.05E-6 T 29-03-2018 IPR008462 CsbD-like domain CKQ55_RS26290 dfab22db49fc8c13f55c01ae6796cb0b 90 Pfam PF05957 Bacterial protein of unknown function (DUF883) 5 90 4.9E-13 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CKQ55_RS26290 dfab22db49fc8c13f55c01ae6796cb0b 90 Gene3D G3DSA:1.10.1470.10 13 68 1.1E-10 T 29-03-2018 IPR008462 CsbD-like domain CKQ55_RS01860 0c94afeb527cb0fe0513b952a38ec9f6 3985 Gene3D G3DSA:2.60.40.1120 3046 3176 0.0055 T 29-03-2018 CKQ55_RS01860 0c94afeb527cb0fe0513b952a38ec9f6 3985 Gene3D G3DSA:2.60.40.1120 438 537 2.1E-5 T 29-03-2018 CKQ55_RS01860 0c94afeb527cb0fe0513b952a38ec9f6 3985 Gene3D G3DSA:2.60.40.10 237 330 3.0E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS01860 0c94afeb527cb0fe0513b952a38ec9f6 3985 Gene3D G3DSA:2.60.40.10 341 428 8.9E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS01860 0c94afeb527cb0fe0513b952a38ec9f6 3985 Gene3D G3DSA:2.60.40.1120 3785 3877 0.25 T 29-03-2018 CKQ55_RS01860 0c94afeb527cb0fe0513b952a38ec9f6 3985 Gene3D G3DSA:2.60.40.1120 2184 2342 0.045 T 29-03-2018 CKQ55_RS11460 887089ac4b6b06c21917e5a7250da0b2 230 PIRSF PIRSF006993 1 230 1.4E-108 T 29-03-2018 IPR016500 Uncharacterised conserved protein UCP006993 CKQ55_RS11460 887089ac4b6b06c21917e5a7250da0b2 230 Pfam PF07356 Protein of unknown function (DUF1481) 42 226 6.9E-71 T 29-03-2018 IPR010858 Protein of unknown function DUF1481 CKQ55_RS14965 4ae979f3a1de4a830218884f39d3eaed 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 270 1.7E-115 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CKQ55_RS14965 4ae979f3a1de4a830218884f39d3eaed 276 Gene3D G3DSA:1.20.1540.10 91 271 1.5E-35 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CKQ55_RS14965 4ae979f3a1de4a830218884f39d3eaed 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 274 44.901 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CKQ55_RS14965 4ae979f3a1de4a830218884f39d3eaed 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 9.4E-30 T 29-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 CKQ55_RS14965 4ae979f3a1de4a830218884f39d3eaed 276 Pfam PF01694 Rhomboid family 132 269 1.1E-27 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CKQ55_RS14965 4ae979f3a1de4a830218884f39d3eaed 276 SUPERFAMILY SSF144091 92 267 6.15E-43 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CKQ55_RS20550 3d1259909d8da379fce3560ee54ed297 291 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 61 275 5.2E-52 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CKQ55_RS20550 3d1259909d8da379fce3560ee54ed297 291 Gene3D G3DSA:3.40.630.40 46 279 2.5E-57 T 29-03-2018 CKQ55_RS20550 3d1259909d8da379fce3560ee54ed297 291 SUPERFAMILY SSF53187 202 279 1.66E-54 T 29-03-2018 CKQ55_RS20550 3d1259909d8da379fce3560ee54ed297 291 SUPERFAMILY SSF53187 59 154 1.66E-54 T 29-03-2018 CKQ55_RS20550 3d1259909d8da379fce3560ee54ed297 291 SMART SM00646 120 275 2.1E-67 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CKQ55_RS15820 8578d9db02c47a0cc562fa1b533a0c18 162 Pfam PF04386 Stringent starvation protein B 9 162 4.4E-44 T 29-03-2018 IPR007481 Stringent starvation protein B CKQ55_RS15820 8578d9db02c47a0cc562fa1b533a0c18 162 PIRSF PIRSF005276 3 162 1.0E-60 T 29-03-2018 IPR007481 Stringent starvation protein B CKQ55_RS15820 8578d9db02c47a0cc562fa1b533a0c18 162 Gene3D G3DSA:2.30.30.220 10 107 9.2E-42 T 29-03-2018 IPR007481 Stringent starvation protein B CKQ55_RS15820 8578d9db02c47a0cc562fa1b533a0c18 162 SUPERFAMILY SSF101738 4 112 1.44E-48 T 29-03-2018 IPR007481 Stringent starvation protein B CKQ55_RS29530 e192d6f496a9db83a2c23da437851c1b 269 SUPERFAMILY SSF51366 1 266 5.37E-92 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS29530 e192d6f496a9db83a2c23da437851c1b 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS29530 e192d6f496a9db83a2c23da437851c1b 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 5.1E-109 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS29530 e192d6f496a9db83a2c23da437851c1b 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 5.5E-99 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS29530 e192d6f496a9db83a2c23da437851c1b 269 Gene3D G3DSA:3.20.20.70 2 269 7.2E-73 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS29530 e192d6f496a9db83a2c23da437851c1b 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.648 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CKQ55_RS01280 6b93eb0f3e25dbc146a4d5c28d97b6e7 413 Gene3D G3DSA:3.90.1150.10 285 413 1.6E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS01280 6b93eb0f3e25dbc146a4d5c28d97b6e7 413 Gene3D G3DSA:3.40.640.10 12 284 1.5E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS01280 6b93eb0f3e25dbc146a4d5c28d97b6e7 413 SUPERFAMILY SSF53383 6 389 2.13E-89 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS01280 6b93eb0f3e25dbc146a4d5c28d97b6e7 413 Pfam PF00266 Aminotransferase class-V 16 359 2.1E-26 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS01280 6b93eb0f3e25dbc146a4d5c28d97b6e7 413 PIRSF PIRSF000524 8 413 2.2E-106 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CKQ55_RS05820 f14a604483f1c590018ca70bf78747e8 238 Pfam PF11340 Protein of unknown function (DUF3142) 80 176 3.8E-20 T 29-03-2018 IPR021488 Protein of unknown function DUF3142 CKQ55_RS05820 f14a604483f1c590018ca70bf78747e8 238 Gene3D G3DSA:3.20.20.80 33 215 2.2E-5 T 29-03-2018 CKQ55_RS15300 039cb3d1e963a8ff266c42bf24444377 157 Pfam PF01478 Type IV leader peptidase family 12 114 1.5E-21 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CKQ55_RS15300 039cb3d1e963a8ff266c42bf24444377 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 98 113 3.2E-17 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS15300 039cb3d1e963a8ff266c42bf24444377 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 18 35 3.2E-17 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS15300 039cb3d1e963a8ff266c42bf24444377 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 75 85 3.2E-17 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS15300 039cb3d1e963a8ff266c42bf24444377 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 86 97 3.2E-17 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS14850 190192c623f75df682f6f78d15ce18b5 438 Gene3D G3DSA:3.40.190.10 375 431 0.017 T 29-03-2018 CKQ55_RS14850 190192c623f75df682f6f78d15ce18b5 438 Gene3D G3DSA:3.40.190.10 24 215 1.3E-29 T 29-03-2018 CKQ55_RS14850 190192c623f75df682f6f78d15ce18b5 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 1.6E-44 T 29-03-2018 CKQ55_RS14850 190192c623f75df682f6f78d15ce18b5 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CKQ55_RS14850 190192c623f75df682f6f78d15ce18b5 438 SUPERFAMILY SSF53850 25 425 7.76E-77 T 29-03-2018 CKQ55_RS14850 190192c623f75df682f6f78d15ce18b5 438 Gene3D G3DSA:3.40.190.10 259 374 7.4E-14 T 29-03-2018 CKQ55_RS24580 6eb1f988e700c9e0a62c3eb368cbae87 152 Gene3D G3DSA:3.10.450.50 4 130 8.1E-45 T 29-03-2018 CKQ55_RS24580 6eb1f988e700c9e0a62c3eb368cbae87 152 Gene3D G3DSA:3.10.450.50 136 152 0.11 T 29-03-2018 CKQ55_RS24580 6eb1f988e700c9e0a62c3eb368cbae87 152 SUPERFAMILY SSF54427 25 129 2.02E-37 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS24580 6eb1f988e700c9e0a62c3eb368cbae87 152 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 29.506 T 29-03-2018 IPR023006 Uncharacterised protein family UPF0225 CKQ55_RS24580 6eb1f988e700c9e0a62c3eb368cbae87 152 SUPERFAMILY SSF103642 132 151 3.11E-8 T 29-03-2018 CKQ55_RS24580 6eb1f988e700c9e0a62c3eb368cbae87 152 Pfam PF02810 SEC-C motif 134 152 5.9E-11 T 29-03-2018 IPR004027 SEC-C motif CKQ55_RS24890 7a58c61a253078a087d75aa171eee585 219 Gene3D G3DSA:2.60.120.10 16 147 2.0E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS24890 7a58c61a253078a087d75aa171eee585 219 SUPERFAMILY SSF51206 29 139 9.95E-9 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CKQ55_RS24890 7a58c61a253078a087d75aa171eee585 219 Pfam PF15977 Winged helix-turn-helix DNA binding 150 216 1.6E-27 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Gene3D G3DSA:3.50.50.60 694 859 1.4E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Gene3D G3DSA:3.20.20.70 43 409 6.4E-12 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Gene3D G3DSA:3.50.50.60 553 643 7.6E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 455 534 3.7E-16 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 SUPERFAMILY SSF46548 431 563 1.05E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 PRINTS PR00419 Adrenodoxin reductase family signature 683 697 4.0E-16 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 PRINTS PR00419 Adrenodoxin reductase family signature 554 576 4.0E-16 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 PRINTS PR00419 Adrenodoxin reductase family signature 577 590 4.0E-16 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 SUPERFAMILY SSF46548 885 970 1.57E-10 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Gene3D G3DSA:3.50.50.60 644 693 8.7E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 940 951 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 554 841 2.1E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 SUPERFAMILY SSF51395 291 409 1.74E-14 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 SUPERFAMILY SSF51395 208 259 1.74E-14 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 SUPERFAMILY SSF51395 43 140 1.74E-14 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1029 0.0 T 29-03-2018 IPR017701 Putative selenate reductase YgfK CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 SUPERFAMILY SSF51971 553 788 1.35E-43 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Gene3D G3DSA:1.10.1060.10 410 552 4.0E-25 T 29-03-2018 CKQ55_RS24315 fa0317f4f9ba0faacb24af4675681d27 1034 Gene3D G3DSA:1.10.1060.10 861 977 8.4E-11 T 29-03-2018 CKQ55_RS12395 ca0053b61ea66d0981896af510aa4a46 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 305 3.2E-41 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS12395 ca0053b61ea66d0981896af510aa4a46 334 Gene3D G3DSA:1.10.3470.10 12 311 2.3E-25 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS02055 b9e0a2192efe83d4e6f1363860961f06 259 Gene3D G3DSA:3.40.50.150 8 259 6.5E-54 T 29-03-2018 CKQ55_RS02055 b9e0a2192efe83d4e6f1363860961f06 259 SUPERFAMILY SSF53335 4 255 8.97E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS02055 b9e0a2192efe83d4e6f1363860961f06 259 Pfam PF13847 Methyltransferase domain 46 151 7.3E-18 T 29-03-2018 IPR025714 Methyltransferase domain CKQ55_RS02055 b9e0a2192efe83d4e6f1363860961f06 259 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 43.015 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 Pfam PF00107 Zinc-binding dehydrogenase 180 302 6.0E-23 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 139 1.3E-29 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 SUPERFAMILY SSF50129 7 178 1.49E-48 T 29-03-2018 IPR011032 GroES-like CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 SUPERFAMILY SSF51735 142 310 6.16E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 Gene3D G3DSA:3.90.180.10 1 151 2.4E-43 T 29-03-2018 CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 SMART SM00829 9 343 9.1E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS29850 ae4d39506b7216c5dd172a1c001e4453 347 Gene3D G3DSA:3.40.50.720 152 340 7.9E-28 T 29-03-2018 CKQ55_RS27235 3beebf7a52df8a4f3b1d87db660afd56 297 Pfam PF13557 Putative MetA-pathway of phenol degradation 54 285 7.6E-30 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative CKQ55_RS09880 b7840ac7ec7d6e8ce48c58e75b593f99 96 Gene3D G3DSA:2.20.25.10 2 96 1.1E-6 T 29-03-2018 CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 Gene3D G3DSA:3.40.50.720 1 251 1.1E-70 T 29-03-2018 CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.9E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 SUPERFAMILY SSF51735 5 252 4.37E-81 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 Pfam PF00106 short chain dehydrogenase 10 203 7.8E-64 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS06595 a2cc6f875438df0e40dc50c02b04da6b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.8E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS02285 86d5f328d19b22f42d5fbd091f3691c6 552 Gene3D G3DSA:3.40.50.300 1 348 9.2E-17 T 29-03-2018 CKQ55_RS02285 86d5f328d19b22f42d5fbd091f3691c6 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 1.6E-155 T 29-03-2018 IPR022602 Protein of unknown function DUF2813 CKQ55_RS02285 86d5f328d19b22f42d5fbd091f3691c6 552 SUPERFAMILY SSF52540 1 331 8.13E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15680 bc4c32497a71fbab9f9840c941d419c3 481 PIRSF PIRSF004919 14 481 1.2E-148 T 29-03-2018 IPR025502 TldD CKQ55_RS15680 bc4c32497a71fbab9f9840c941d419c3 481 Gene3D G3DSA:3.30.2290.10 17 240 2.9E-55 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CKQ55_RS15680 bc4c32497a71fbab9f9840c941d419c3 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 8.8E-67 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CKQ55_RS15680 bc4c32497a71fbab9f9840c941d419c3 481 SUPERFAMILY SSF111283 21 480 2.09E-128 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 PIRSF PIRSF036298 1 294 3.4E-160 T 29-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.15 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 SUPERFAMILY SSF54862 26 251 2.09E-71 T 29-03-2018 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Gene3D G3DSA:3.30.70.20 43 113 2.0E-20 T 29-03-2018 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Gene3D G3DSA:3.30.70.20 10 42 0.015 T 29-03-2018 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Gene3D G3DSA:3.30.70.20 114 152 4.1E-17 T 29-03-2018 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Gene3D G3DSA:3.30.70.20 153 255 8.5E-24 T 29-03-2018 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 8.9E-26 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 2.5E-18 T 29-03-2018 IPR015246 Formate dehydrogenase, transmembrane CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 6.7E-145 T 29-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 SUPERFAMILY SSF81597 246 290 2.48E-13 T 29-03-2018 CKQ55_RS27715 a99b23d08a21e2f2171aec4c14ec4dcc 294 Gene3D G3DSA:1.20.5.480 256 291 1.1E-21 T 29-03-2018 CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 Pfam PF00005 ABC transporter 34 184 3.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 2.7E-20 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 Gene3D G3DSA:3.40.50.300 3 321 2.5E-81 T 29-03-2018 CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 SMART SM00382 42 242 1.5E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 SUPERFAMILY SSF52540 7 256 1.01E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS25415 c2515a3fb3eec89bf8dfbd8b627e5091 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 2.1E-29 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 Gene3D G3DSA:3.40.30.10 2 160 6.6E-46 T 29-03-2018 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 SUPERFAMILY SSF52833 3 158 1.54E-60 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 29-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 PIRSF PIRSF000303 1 160 3.3E-64 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 Pfam PF00255 Glutathione peroxidase 4 111 3.4E-40 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 9.3E-21 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 9.3E-21 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS25855 fa16bac4c3ea537aeceda1b1aced89bf 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 9.3E-21 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CKQ55_RS26870 2b38aa6cb2bd10a9855b7cc46545525d 199 Gene3D G3DSA:3.40.50.1820 3 192 3.4E-14 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS26870 2b38aa6cb2bd10a9855b7cc46545525d 199 SUPERFAMILY SSF53474 8 190 1.12E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS26870 2b38aa6cb2bd10a9855b7cc46545525d 199 Pfam PF01738 Dienelactone hydrolase family 7 191 1.6E-17 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CKQ55_RS06160 fb62e9039fa5e8cd241735005ae1ac44 231 Gene3D G3DSA:3.40.50.620 1 231 3.0E-54 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS06160 fb62e9039fa5e8cd241735005ae1ac44 231 PIRSF PIRSF006293 1 225 2.0E-84 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CKQ55_RS06160 fb62e9039fa5e8cd241735005ae1ac44 231 SUPERFAMILY SSF52402 1 213 1.26E-70 T 29-03-2018 CKQ55_RS06160 fb62e9039fa5e8cd241735005ae1ac44 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 9.2E-86 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CKQ55_RS06160 fb62e9039fa5e8cd241735005ae1ac44 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 1.6E-83 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CKQ55_RS06160 fb62e9039fa5e8cd241735005ae1ac44 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 51.397 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CKQ55_RS00315 f2b5a57b565b2a28fa1e72c7822d8d17 179 SUPERFAMILY SSF53955 2 175 2.14E-44 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS00315 f2b5a57b565b2a28fa1e72c7822d8d17 179 Pfam PF09374 Predicted Peptidoglycan domain 94 178 1.2E-23 T 29-03-2018 IPR018537 Peptidoglycan binding domain CKQ55_RS00315 f2b5a57b565b2a28fa1e72c7822d8d17 179 Gene3D G3DSA:1.20.141.10 1 179 7.6E-43 T 29-03-2018 CKQ55_RS00315 f2b5a57b565b2a28fa1e72c7822d8d17 179 Pfam PF05838 Glycosyl hydrolase 108 8 90 7.3E-24 T 29-03-2018 IPR008565 Protein of unknown function DUF847 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 SUPERFAMILY SSF46785 6 116 1.41E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 SUPERFAMILY SSF53850 95 302 1.34E-36 T 29-03-2018 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 Gene3D G3DSA:3.40.190.10 95 180 1.2E-8 T 29-03-2018 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 Gene3D G3DSA:3.40.190.10 181 270 5.9E-19 T 29-03-2018 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 8.7E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 8.7E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 8.7E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 Gene3D G3DSA:1.10.10.10 2 93 1.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 Pfam PF03466 LysR substrate binding domain 95 299 8.1E-36 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS00830 f691ba395d7fa3ce7da228754926ba17 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 4.2E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS07460 5353bf0a87b8b934b02d28cd1db36b43 271 PIRSF PIRSF002854 1 271 2.6E-106 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS07460 5353bf0a87b8b934b02d28cd1db36b43 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 5.6E-148 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS07460 5353bf0a87b8b934b02d28cd1db36b43 271 Pfam PF03180 NLPA lipoprotein 33 271 1.8E-99 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS07460 5353bf0a87b8b934b02d28cd1db36b43 271 SUPERFAMILY SSF53850 33 271 1.5E-83 T 29-03-2018 CKQ55_RS07460 5353bf0a87b8b934b02d28cd1db36b43 271 Gene3D G3DSA:3.40.190.10 32 125 5.6E-21 T 29-03-2018 CKQ55_RS07460 5353bf0a87b8b934b02d28cd1db36b43 271 Gene3D G3DSA:3.40.190.10 126 271 1.0E-49 T 29-03-2018 CKQ55_RS19445 ad2db191fefabf03041a9f555050cceb 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS19445 ad2db191fefabf03041a9f555050cceb 506 Gene3D G3DSA:3.40.309.10 279 480 1.3E-65 T 29-03-2018 CKQ55_RS19445 ad2db191fefabf03041a9f555050cceb 506 Gene3D G3DSA:3.40.605.10 15 278 2.9E-90 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS19445 ad2db191fefabf03041a9f555050cceb 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS19445 ad2db191fefabf03041a9f555050cceb 506 SUPERFAMILY SSF53720 14 498 1.15E-161 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS19445 ad2db191fefabf03041a9f555050cceb 506 Pfam PF00171 Aldehyde dehydrogenase family 35 493 2.6E-162 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS12500 89b225683ad2b17631bc682ecccb8084 188 Gene3D G3DSA:2.60.40.1090 39 188 3.0E-41 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12500 89b225683ad2b17631bc682ecccb8084 188 SUPERFAMILY SSF49401 40 188 1.99E-38 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS12500 89b225683ad2b17631bc682ecccb8084 188 Pfam PF00419 Fimbrial protein 42 188 1.1E-26 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10180 449ff6a3304bbaa56c807afa47bfd10e 214 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 5 213 4.9E-118 T 29-03-2018 IPR025456 Protein of unknown function DUF4310 CKQ55_RS10180 449ff6a3304bbaa56c807afa47bfd10e 214 Pfam PF14187 Domain of unknown function (DUF4310) 4 211 3.6E-107 T 29-03-2018 IPR025456 Protein of unknown function DUF4310 CKQ55_RS02135 8a80f3d07cd182a25c6c29c10b19ca73 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CKQ55_RS02135 8a80f3d07cd182a25c6c29c10b19ca73 285 Gene3D G3DSA:1.20.1080.10 12 285 5.4E-79 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS02135 8a80f3d07cd182a25c6c29c10b19ca73 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.3E-127 T 29-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CKQ55_RS02135 8a80f3d07cd182a25c6c29c10b19ca73 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 3.0E-96 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CKQ55_RS02135 8a80f3d07cd182a25c6c29c10b19ca73 285 Pfam PF01226 Formate/nitrite transporter 15 276 5.6E-76 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CKQ55_RS02135 8a80f3d07cd182a25c6c29c10b19ca73 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.4E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 SMART SM00487 28 234 3.5E-52 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 Gene3D G3DSA:3.40.50.300 235 420 1.2E-43 T 29-03-2018 CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 SUPERFAMILY SSF52540 84 363 5.7E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.901 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 Gene3D G3DSA:3.40.50.300 3 234 8.0E-51 T 29-03-2018 CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 SMART SM00490 270 351 7.2E-31 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS12005 12f6fee880fa62dc00a2204ae4e76a11 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.1E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 Gene3D G3DSA:1.10.10.10 1 79 9.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 Pfam PF03466 LysR substrate binding domain 91 287 8.0E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 Gene3D G3DSA:3.40.190.10 80 180 7.8E-14 T 29-03-2018 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 Gene3D G3DSA:3.40.190.10 181 258 7.1E-8 T 29-03-2018 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 SUPERFAMILY SSF46785 6 88 4.09E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17890 e1f9a53657ede086af94e249df9f8400 290 SUPERFAMILY SSF53850 93 289 7.76E-28 T 29-03-2018 CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 SUPERFAMILY SSF116726 286 360 7.59E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 Pfam PF02080 TrkA-C domain 291 360 1.8E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 57.244 T 29-03-2018 IPR023018 Transport protein YidE, putative CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 5.1E-49 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 4.4E-38 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 2.5E-46 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 3.5E-42 T 29-03-2018 IPR006512 YidE/YbjL duplication CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 Gene3D G3DSA:3.30.70.1450 189 279 1.8E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 Gene3D G3DSA:3.30.70.1450 280 366 2.0E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS13150 e65d234fbb1e584ee9cbd92be3418a4b 553 SUPERFAMILY SSF116726 203 271 1.02E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 88 1.0E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 Gene3D G3DSA:3.40.50.720 139 299 6.1E-26 T 29-03-2018 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 Pfam PF13602 Zinc-binding dehydrogenase 193 332 1.4E-21 T 29-03-2018 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 SUPERFAMILY SSF51735 116 286 7.04E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 SUPERFAMILY SSF50129 2 144 9.43E-31 T 29-03-2018 IPR011032 GroES-like CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 Gene3D G3DSA:3.90.180.10 1 138 1.3E-29 T 29-03-2018 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 SMART SM00829 13 332 8.0E-11 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 148 169 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CKQ55_RS13460 c176e76bf5892a75404cc71ba64a163f 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 12 335 9.7E-159 T 29-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 CKQ55_RS05340 91c7631ee29134b8e4abf15c50d58c31 404 SUPERFAMILY SSF56349 99 380 4.12E-64 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS05340 91c7631ee29134b8e4abf15c50d58c31 404 Gene3D G3DSA:1.10.443.10 205 371 3.5E-29 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS05340 91c7631ee29134b8e4abf15c50d58c31 404 Gene3D G3DSA:1.10.150.130 88 204 1.0E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS05340 91c7631ee29134b8e4abf15c50d58c31 404 Pfam PF13356 Arm DNA-binding domain 3 88 3.0E-18 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CKQ55_RS05340 91c7631ee29134b8e4abf15c50d58c31 404 Pfam PF00589 Phage integrase family 207 370 1.1E-28 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS20380 9c5af8fc8ef91e6460a2d3d20bcd6b88 211 Pfam PF13740 ACT domain 29 104 3.4E-25 T 29-03-2018 CKQ55_RS20380 9c5af8fc8ef91e6460a2d3d20bcd6b88 211 PIRSF PIRSF028103 27 202 5.3E-64 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CKQ55_RS20380 9c5af8fc8ef91e6460a2d3d20bcd6b88 211 Gene3D G3DSA:3.30.70.260 30 109 9.3E-11 T 29-03-2018 CKQ55_RS20380 9c5af8fc8ef91e6460a2d3d20bcd6b88 211 Gene3D G3DSA:3.30.70.260 113 203 5.9E-12 T 29-03-2018 CKQ55_RS20380 9c5af8fc8ef91e6460a2d3d20bcd6b88 211 SUPERFAMILY SSF55021 114 201 1.98E-14 T 29-03-2018 CKQ55_RS20380 9c5af8fc8ef91e6460a2d3d20bcd6b88 211 SUPERFAMILY SSF55021 28 108 1.42E-16 T 29-03-2018 CKQ55_RS07040 7feb54ea09c82d602f262b3373e1b9d3 510 SUPERFAMILY SSF48557 5 500 2.04E-155 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CKQ55_RS07040 7feb54ea09c82d602f262b3373e1b9d3 510 Pfam PF00221 Aromatic amino acid lyase 17 472 7.1E-163 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CKQ55_RS07040 7feb54ea09c82d602f262b3373e1b9d3 510 Gene3D G3DSA:1.20.200.10 199 508 1.0E-111 T 29-03-2018 CKQ55_RS07040 7feb54ea09c82d602f262b3373e1b9d3 510 Gene3D G3DSA:1.10.275.10 2 198 1.1E-54 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CKQ55_RS29855 a767f952938071fcb93f98e67e1ac447 459 Pfam PF00083 Sugar (and other) transporter 56 450 1.3E-32 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS29855 a767f952938071fcb93f98e67e1ac447 459 Gene3D G3DSA:1.20.1250.20 12 219 5.9E-31 T 29-03-2018 CKQ55_RS29855 a767f952938071fcb93f98e67e1ac447 459 SUPERFAMILY SSF103473 19 449 2.49E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29855 a767f952938071fcb93f98e67e1ac447 459 Gene3D G3DSA:1.20.1250.20 250 450 1.4E-18 T 29-03-2018 CKQ55_RS04395 b623b3bf7bdc8b66de24a820b0bba165 134 Gene3D G3DSA:1.10.10.60 30 87 4.5E-9 T 29-03-2018 CKQ55_RS04395 b623b3bf7bdc8b66de24a820b0bba165 134 Pfam PF01381 Helix-turn-helix 74 122 8.9E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS04395 b623b3bf7bdc8b66de24a820b0bba165 134 SUPERFAMILY SSF47413 74 126 1.15E-10 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS04395 b623b3bf7bdc8b66de24a820b0bba165 134 Gene3D G3DSA:1.10.260.40 88 134 4.6E-14 T 29-03-2018 CKQ55_RS04395 b623b3bf7bdc8b66de24a820b0bba165 134 SMART SM00530 70 126 7.2E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.534 T 29-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 SMART SM00855 5 191 1.6E-26 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 Gene3D G3DSA:3.40.50.1240 2 250 1.4E-66 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 SUPERFAMILY SSF53254 4 247 2.94E-77 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 PIRSF PIRSF000709 3 116 6.2E-9 T 29-03-2018 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 PIRSF PIRSF000709 167 237 0.16 T 29-03-2018 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 3.5E-128 T 29-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 5.7E-30 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 131 221 1.5E-4 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS03505 0701142b925fc75ce28344a168a82145 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CKQ55_RS17000 46086f0087af86d74ebc4e4e16180d74 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 45 461 1.5E-118 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS17000 46086f0087af86d74ebc4e4e16180d74 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CKQ55_RS17000 46086f0087af86d74ebc4e4e16180d74 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 461 5.1E-60 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS25675 39973bca819cab552cae480039ba86d7 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.1E-7 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 Pfam PF03466 LysR substrate binding domain 91 295 4.0E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 SUPERFAMILY SSF53850 92 299 5.44E-40 T 29-03-2018 CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 Gene3D G3DSA:1.10.10.10 2 87 3.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 Gene3D G3DSA:3.40.190.10 89 178 6.7E-16 T 29-03-2018 CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.4E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 Gene3D G3DSA:3.40.190.10 179 268 1.6E-22 T 29-03-2018 CKQ55_RS09215 46531296bf71c963a20b5fd4aad1ee40 304 SUPERFAMILY SSF46785 5 87 3.95E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04755 2cfe6b12e55dcf389b828e3a3c4483f9 54 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 54 6.5E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS04755 2cfe6b12e55dcf389b828e3a3c4483f9 54 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.5E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS04755 2cfe6b12e55dcf389b828e3a3c4483f9 54 Gene3D G3DSA:1.10.10.60 1 34 2.9E-12 T 29-03-2018 CKQ55_RS04755 2cfe6b12e55dcf389b828e3a3c4483f9 54 Gene3D G3DSA:1.10.260.40 35 54 1.0E-6 T 29-03-2018 CKQ55_RS04755 2cfe6b12e55dcf389b828e3a3c4483f9 54 SUPERFAMILY SSF46689 3 52 3.64E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS04755 2cfe6b12e55dcf389b828e3a3c4483f9 54 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 49 9.8E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS07870 1b2ac00c4ca12041ceb4e46298652931 851 Pfam PF13954 PapC N-terminal domain 34 173 2.3E-39 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS07870 1b2ac00c4ca12041ceb4e46298652931 851 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 299 309 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS07870 1b2ac00c4ca12041ceb4e46298652931 851 Pfam PF13953 PapC C-terminal domain 766 830 3.0E-19 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS07870 1b2ac00c4ca12041ceb4e46298652931 851 Pfam PF00577 Outer membrane usher protein 187 757 3.0E-159 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS07870 1b2ac00c4ca12041ceb4e46298652931 851 SUPERFAMILY SSF141729 32 146 5.75E-27 T 29-03-2018 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 Gene3D G3DSA:3.40.50.2300 57 172 2.8E-17 T 29-03-2018 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 29-03-2018 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 Gene3D G3DSA:3.40.50.2300 173 304 5.2E-23 T 29-03-2018 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 4.0E-164 T 29-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 Pfam PF13377 Periplasmic binding protein-like domain 168 309 1.6E-18 T 29-03-2018 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 SUPERFAMILY SSF53822 63 313 6.85E-58 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 SUPERFAMILY SSF47413 3 60 9.6E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 Gene3D G3DSA:1.10.260.40 20 56 8.2E-22 T 29-03-2018 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.5E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 Gene3D G3DSA:1.10.10.10 1 19 0.044 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10090 b3a1f224a08fb0c031f960c9c1e669e2 315 SMART SM00354 4 74 1.8E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 Pfam PF03717 Penicillin-binding Protein dimerisation domain 50 223 1.1E-46 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 Gene3D G3DSA:3.40.710.10 236 605 1.4E-84 T 29-03-2018 CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 Pfam PF00905 Penicillin binding protein transpeptidase domain 258 597 7.7E-76 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 5 601 1.1E-226 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 SUPERFAMILY SSF56601 240 602 3.52E-88 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 SUPERFAMILY SSF56519 43 239 9.81E-51 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS27445 cdeb85ac3f61f2b00940b3286bc995e3 624 Gene3D G3DSA:3.90.1310.10 19 235 2.5E-52 T 29-03-2018 CKQ55_RS28600 a900a608e1d6ee5b50042e5c857bf9af 165 Pfam PF09335 SNARE associated Golgi protein 39 160 5.0E-13 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 SUPERFAMILY SSF54364 13 86 1.57E-27 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 Gene3D G3DSA:3.30.110.10 87 180 1.9E-35 T 29-03-2018 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 Gene3D G3DSA:3.10.20.80 10 86 2.0E-30 T 29-03-2018 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.152 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 SUPERFAMILY SSF55200 90 179 1.23E-34 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 1.6E-75 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 3.2E-37 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 29-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CKQ55_RS24780 28e95c185f590919785b8e46561b729b 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 3.7E-29 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 SMART SM00342 228 311 3.6E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 Gene3D G3DSA:1.10.10.60 194 269 7.5E-8 T 29-03-2018 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 SUPERFAMILY SSF51182 52 136 1.07E-11 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 2.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 2.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 Pfam PF02311 AraC-like ligand binding domain 58 180 1.2E-18 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 Gene3D G3DSA:1.10.10.60 270 318 6.4E-14 T 29-03-2018 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 307 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 SUPERFAMILY SSF46689 264 314 1.34E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 37 318 48.608 T 29-03-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 Pfam PF12833 Helix-turn-helix domain 235 313 1.2E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS12355 aafbf220eec599f8e65473ef3a5f52eb 318 Gene3D G3DSA:2.60.120.280 43 193 2.1E-18 T 29-03-2018 CKQ55_RS02585 ec302d8841f50d983261bcbbeff24e35 78 Pfam PF05052 MerE protein 2 74 8.3E-43 T 29-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 CKQ55_RS02585 ec302d8841f50d983261bcbbeff24e35 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-16 T 29-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 64.895 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 SUPERFAMILY SSF53335 76 430 8.22E-89 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 SUPERFAMILY SSF50249 2 66 2.4E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 5.9E-150 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 Gene3D G3DSA:2.40.50.140 1 82 5.5E-27 T 29-03-2018 CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 262 431 4.3E-26 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 Gene3D G3DSA:3.40.50.150 83 430 1.4E-54 T 29-03-2018 CKQ55_RS18580 6796bbf109b61d5552b41022e5aba6b9 447 Pfam PF01938 TRAM domain 11 66 3.1E-10 T 29-03-2018 IPR002792 TRAM domain CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 SUPERFAMILY SSF102886 4 298 5.49E-138 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PIRSF PIRSF000166 1 299 6.5E-129 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 299 1.4E-132 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 Gene3D G3DSA:3.40.1500.10 1 299 4.5E-140 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 58.274 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 123 145 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 260 286 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 46 67 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 88 112 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 29 45 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 160 189 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS20545 a6ee7be37e530ee8a4ffbf40374595b4 299 PRINTS PR00073 Coprogen oxidase signature 232 259 3.6E-90 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CKQ55_RS06370 d87ce01c7df514831b62899d89603dd4 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.475 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CKQ55_RS06370 d87ce01c7df514831b62899d89603dd4 139 SUPERFAMILY SSF48013 3 134 8.24E-42 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CKQ55_RS06370 d87ce01c7df514831b62899d89603dd4 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 6.9E-45 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CKQ55_RS06370 d87ce01c7df514831b62899d89603dd4 139 Gene3D G3DSA:1.10.940.10 1 138 4.6E-42 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CKQ55_RS06370 d87ce01c7df514831b62899d89603dd4 139 Pfam PF01029 NusB family 7 131 9.0E-35 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CKQ55_RS02975 09946cffe5af6791d06fcfd5fc95ab66 172 Gene3D G3DSA:2.40.160.20 18 169 7.1E-4 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS22155 5fdbb5c453905720d61867aaf2590476 425 Gene3D G3DSA:1.20.1250.20 8 211 1.2E-19 T 29-03-2018 CKQ55_RS22155 5fdbb5c453905720d61867aaf2590476 425 TIGRFAM TIGR00897 2A0118: polyol permease 1 406 3.6E-201 T 29-03-2018 IPR004748 Polyol permease GO:0005215|GO:0006810|GO:0016021 CKQ55_RS22155 5fdbb5c453905720d61867aaf2590476 425 SUPERFAMILY SSF103473 6 415 2.22E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS22155 5fdbb5c453905720d61867aaf2590476 425 Pfam PF07690 Major Facilitator Superfamily 25 313 3.3E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS22155 5fdbb5c453905720d61867aaf2590476 425 Gene3D G3DSA:1.20.1250.20 217 421 1.0E-20 T 29-03-2018 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 Gene3D G3DSA:3.40.190.10 95 185 1.5E-14 T 29-03-2018 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.2E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 SUPERFAMILY SSF46785 8 110 5.13E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 Gene3D G3DSA:1.10.10.10 3 90 3.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 Pfam PF03466 LysR substrate binding domain 95 299 3.1E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 Gene3D G3DSA:3.40.190.10 186 272 1.7E-18 T 29-03-2018 CKQ55_RS21820 31bb597817330bf4fa0f83fe86ea4ba6 305 SUPERFAMILY SSF53850 96 302 1.41E-31 T 29-03-2018 CKQ55_RS27780 430a70b5d035e07c949f9bb7af7a2f78 322 Gene3D G3DSA:3.40.190.10 172 291 6.5E-21 T 29-03-2018 CKQ55_RS27780 430a70b5d035e07c949f9bb7af7a2f78 322 Gene3D G3DSA:3.40.190.10 25 171 1.6E-21 T 29-03-2018 CKQ55_RS27780 430a70b5d035e07c949f9bb7af7a2f78 322 Pfam PF13343 Bacterial extracellular solute-binding protein 74 295 3.7E-31 T 29-03-2018 CKQ55_RS27780 430a70b5d035e07c949f9bb7af7a2f78 322 PIRSF PIRSF002825 1 301 3.3E-52 T 29-03-2018 IPR026045 Ferric binding protein CKQ55_RS27780 430a70b5d035e07c949f9bb7af7a2f78 322 SUPERFAMILY SSF53850 24 290 3.96E-62 T 29-03-2018 CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 Gene3D G3DSA:1.20.1250.20 260 482 6.4E-8 T 29-03-2018 CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 Pfam PF00854 POT family 76 440 3.5E-85 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 456 1.9E-82 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 SUPERFAMILY SSF103473 4 212 1.05E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 SUPERFAMILY SSF103473 254 479 1.05E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS05150 81de091faaf923d30210f83874ace9e0 491 Gene3D G3DSA:1.20.1250.20 2 189 1.6E-25 T 29-03-2018 CKQ55_RS14680 803218eeab284d2f732f59218d313ee9 271 SMART SM00563 90 200 1.5E-19 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS14680 803218eeab284d2f732f59218d313ee9 271 Gene3D G3DSA:3.40.1130.10 35 261 1.6E-26 T 29-03-2018 CKQ55_RS14680 803218eeab284d2f732f59218d313ee9 271 SUPERFAMILY SSF69593 62 244 1.26E-24 T 29-03-2018 CKQ55_RS14680 803218eeab284d2f732f59218d313ee9 271 Pfam PF01553 Acyltransferase 77 192 7.9E-16 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CKQ55_RS27180 31ecefde5a12591cad182d87395230a5 455 Gene3D G3DSA:3.30.1330.90 10 158 9.6E-50 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CKQ55_RS27180 31ecefde5a12591cad182d87395230a5 455 Pfam PF03315 Serine dehydratase beta chain 3 155 7.8E-54 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CKQ55_RS27180 31ecefde5a12591cad182d87395230a5 455 Gene3D G3DSA:1.10.4100.10 252 444 5.7E-32 T 29-03-2018 CKQ55_RS27180 31ecefde5a12591cad182d87395230a5 455 SUPERFAMILY SSF143548 16 157 7.06E-45 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CKQ55_RS27180 31ecefde5a12591cad182d87395230a5 455 Pfam PF03313 Serine dehydratase alpha chain 186 447 3.8E-94 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CKQ55_RS27180 31ecefde5a12591cad182d87395230a5 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 450 9.7E-216 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 6.7E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 SUPERFAMILY SSF46894 135 196 7.48E-12 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 Gene3D G3DSA:1.10.10.10 6 199 5.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26260 2b71de247de69dcff9751d2c6ff89fff 209 SMART SM00421 140 197 7.7E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS21955 b0f78a19475a1c27e357c1714dc5c6d1 155 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 6.3E-25 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 CKQ55_RS21955 b0f78a19475a1c27e357c1714dc5c6d1 155 Pfam PF07308 Protein of unknown function (DUF1456) 86 148 1.1E-20 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 CKQ55_RS03785 b54cc4b2a1d32a5729682c636787bd24 248 SUPERFAMILY SSF88713 1 242 1.11E-90 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS03785 b54cc4b2a1d32a5729682c636787bd24 248 Gene3D G3DSA:3.20.20.370 2 244 1.7E-96 T 29-03-2018 CKQ55_RS03785 b54cc4b2a1d32a5729682c636787bd24 248 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.135 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CKQ55_RS03785 b54cc4b2a1d32a5729682c636787bd24 248 Pfam PF03746 LamB/YcsF family 3 235 3.4E-92 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CKQ55_RS06760 36afdbc7dc77b708f5b66b01bd716772 231 Pfam PF00005 ABC transporter 17 159 9.5E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06760 36afdbc7dc77b708f5b66b01bd716772 231 SUPERFAMILY SSF52540 2 229 1.91E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06760 36afdbc7dc77b708f5b66b01bd716772 231 Gene3D G3DSA:3.40.50.300 1 231 6.0E-50 T 29-03-2018 CKQ55_RS06760 36afdbc7dc77b708f5b66b01bd716772 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06760 36afdbc7dc77b708f5b66b01bd716772 231 SMART SM00382 26 208 0.001 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 ProSitePatterns PS00622 LuxR-type HTH domain signature. 118 145 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 Gene3D G3DSA:1.10.10.10 49 164 1.3E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 SMART SM00421 101 158 3.5E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 SUPERFAMILY SSF46894 99 161 1.73E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 146 1.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 104 118 1.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 118 134 1.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23070 fc376405c0cccda5c11bc491189de2ac 166 Pfam PF00196 Bacterial regulatory proteins, luxR family 104 152 1.4E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 SUPERFAMILY SSF74731 3 117 1.7E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 29-03-2018 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 Gene3D G3DSA:1.10.1900.20 55 116 4.2E-29 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS24790 5157da5120beab69d37c38dbb09d7388 118 Pfam PF00453 Ribosomal protein L20 3 109 2.3E-49 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 Gene3D G3DSA:3.40.50.1980 393 508 3.7E-30 T 29-03-2018 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 87 94 - T 29-03-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 Gene3D G3DSA:1.20.89.10 326 392 3.5E-25 T 29-03-2018 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 Gene3D G3DSA:3.40.50.1980 69 206 2.8E-41 T 29-03-2018 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 498 9.6E-117 T 29-03-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 SUPERFAMILY SSF53807 3 519 4.91E-166 T 29-03-2018 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 Pfam PF11844 Domain of unknown function (DUF3364) 1 55 1.1E-22 T 29-03-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 520 1.4E-242 T 29-03-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 CKQ55_RS22865 837a9c2bb6f215206cd3c0f31ce1308c 520 Gene3D G3DSA:3.40.50.1980 217 325 1.3E-25 T 29-03-2018 CKQ55_RS04915 8bc49c4038139b812ffa8d852a465b6d 414 Gene3D G3DSA:3.30.70.100 319 399 9.3E-5 T 29-03-2018 CKQ55_RS04915 8bc49c4038139b812ffa8d852a465b6d 414 SUPERFAMILY SSF82689 321 396 6.67E-7 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CKQ55_RS04915 8bc49c4038139b812ffa8d852a465b6d 414 Pfam PF00924 Mechanosensitive ion channel 142 396 5.8E-66 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CKQ55_RS04915 8bc49c4038139b812ffa8d852a465b6d 414 SUPERFAMILY SSF50182 186 252 4.58E-12 T 29-03-2018 IPR010920 LSM domain CKQ55_RS04915 8bc49c4038139b812ffa8d852a465b6d 414 Gene3D G3DSA:2.30.30.60 201 251 9.4E-10 T 29-03-2018 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 SMART SM00421 139 196 6.5E-4 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 7.3E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 7.3E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 7.3E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 SUPERFAMILY SSF46894 127 195 4.76E-11 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 192 1.1E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS29560 e5becb26d311a60231382cc403455abc 207 Gene3D G3DSA:1.10.10.10 8 198 1.7E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31615 5668c46c38447c6d80fa8d77a9f7fe47 351 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 42 252 1.1E-34 T 29-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 CKQ55_RS21690 e39c74027a99a0b0355ecc20d057c13e 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 5.6E-188 T 29-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CKQ55_RS21690 e39c74027a99a0b0355ecc20d057c13e 393 Gene3D G3DSA:1.20.1250.20 13 209 1.1E-20 T 29-03-2018 CKQ55_RS21690 e39c74027a99a0b0355ecc20d057c13e 393 Gene3D G3DSA:1.20.1250.20 212 392 2.9E-24 T 29-03-2018 CKQ55_RS21690 e39c74027a99a0b0355ecc20d057c13e 393 SUPERFAMILY SSF103473 19 390 5.49E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS21690 e39c74027a99a0b0355ecc20d057c13e 393 Pfam PF07690 Major Facilitator Superfamily 21 302 6.5E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS08210 9890b8924c4ab350eab94bab80bf1ade 28 Pfam PF08054 Leucine operon leader peptide 1 25 3.4E-9 T 29-03-2018 IPR012570 Leucine operon leader peptide GO:0009098 CKQ55_RS14265 dd19261412ecae0b713d1bab8b52dec3 245 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 236 2.7E-102 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CKQ55_RS14265 dd19261412ecae0b713d1bab8b52dec3 245 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 239 7.0E-73 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CKQ55_RS14265 dd19261412ecae0b713d1bab8b52dec3 245 SUPERFAMILY SSF52540 3 235 4.81E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14265 dd19261412ecae0b713d1bab8b52dec3 245 Gene3D G3DSA:3.40.50.300 3 238 9.1E-26 T 29-03-2018 CKQ55_RS30275 dc1c7aa1a654a9eda3969203739d82b2 75 Gene3D G3DSA:1.10.1220.10 3 74 7.7E-8 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS30275 dc1c7aa1a654a9eda3969203739d82b2 75 SUPERFAMILY SSF47598 18 63 2.78E-7 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS12640 5675aa4c3740a539f654f4b18a2f44a2 232 Gene3D G3DSA:2.40.160.40 26 231 5.8E-30 T 29-03-2018 CKQ55_RS12640 5675aa4c3740a539f654f4b18a2f44a2 232 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 22 231 1.1E-40 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin CKQ55_RS12640 5675aa4c3740a539f654f4b18a2f44a2 232 SUPERFAMILY SSF56935 26 231 3.83E-12 T 29-03-2018 CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 Gene3D G3DSA:3.40.50.2300 1 121 9.1E-33 T 29-03-2018 CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 SMART SM00448 4 115 1.4E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 SUPERFAMILY SSF46894 132 226 3.12E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 Gene3D G3DSA:1.10.10.10 122 227 1.9E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 6.7E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 SMART SM00862 150 226 2.8E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 SUPERFAMILY SSF52172 2 133 5.55E-39 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS08705 17d07a32400a674327d6d739b2d99007 229 Pfam PF00072 Response regulator receiver domain 6 115 7.6E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 Gene3D G3DSA:3.40.50.2300 181 329 2.5E-29 T 29-03-2018 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 Gene3D G3DSA:3.40.50.2300 60 180 2.9E-33 T 29-03-2018 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 SMART SM00354 6 76 1.5E-31 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 338 5.0E-72 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 Gene3D G3DSA:1.10.260.40 7 59 8.9E-21 T 29-03-2018 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 SUPERFAMILY SSF53822 63 338 1.85E-51 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 7.2E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 29-03-2018 CKQ55_RS25810 46d66ceedf25c0d08e42697b02277dfa 342 SUPERFAMILY SSF47413 5 64 2.11E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS00990 9abb282d862be00aac2d2e58dfd92746 286 SUPERFAMILY SSF51182 2 285 4.45E-83 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS00990 9abb282d862be00aac2d2e58dfd92746 286 Pfam PF05726 Pirin C-terminal cupin domain 182 284 1.1E-29 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CKQ55_RS00990 9abb282d862be00aac2d2e58dfd92746 286 Gene3D G3DSA:2.60.120.10 1 257 1.2E-80 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS00990 9abb282d862be00aac2d2e58dfd92746 286 PIRSF PIRSF006232 2 286 1.6E-88 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CKQ55_RS00990 9abb282d862be00aac2d2e58dfd92746 286 Pfam PF02678 Pirin 20 127 3.0E-34 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CKQ55_RS11215 0d37c6af35bd37ceedd210db846d5ec0 296 Gene3D G3DSA:1.10.3720.10 1 283 2.8E-42 T 29-03-2018 CKQ55_RS11215 0d37c6af35bd37ceedd210db846d5ec0 296 SUPERFAMILY SSF161098 8 296 4.02E-69 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS11215 0d37c6af35bd37ceedd210db846d5ec0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 289 1.7E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22110 321359bf2bd15bdda37c503bc71b2fd0 334 Gene3D G3DSA:1.10.4080.10 1 331 3.2E-65 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CKQ55_RS22110 321359bf2bd15bdda37c503bc71b2fd0 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 5.4E-56 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CKQ55_RS22110 321359bf2bd15bdda37c503bc71b2fd0 334 SUPERFAMILY SSF101478 3 326 2.48E-65 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Gene3D G3DSA:2.60.40.1180 528 590 4.2E-17 T 29-03-2018 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Gene3D G3DSA:1.10.10.760 445 482 4.2E-17 T 29-03-2018 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Gene3D G3DSA:3.20.20.80 101 441 6.3E-59 T 29-03-2018 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Pfam PF11941 Domain of unknown function (DUF3459) 503 586 1.9E-11 T 29-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 PIRSF PIRSF006337 6 589 3.0E-215 T 29-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Pfam PF00128 Alpha amylase, catalytic domain 231 439 6.2E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Pfam PF00128 Alpha amylase, catalytic domain 133 210 1.7E-12 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 SUPERFAMILY SSF51445 92 514 6.38E-109 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 SMART SM00642 92 511 7.5E-9 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 20 561 3.3E-214 T 29-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 Gene3D G3DSA:2.60.40.10 3 95 1.0E-19 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS27315 af285984e755f7f0676d99498645eec9 595 SUPERFAMILY SSF81296 9 95 1.54E-15 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 SMART SM00228 115 186 0.21 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 SMART SM00228 211 280 5.1E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 SUPERFAMILY SSF50156 195 290 7.76E-18 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 Gene3D G3DSA:2.30.42.10 126 220 1.4E-10 T 29-03-2018 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 SUPERFAMILY SSF50156 86 181 9.73E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 6.7E-167 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 Pfam PF02163 Peptidase family M50 10 438 3.0E-86 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 Pfam PF13180 PDZ domain 212 287 9.9E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CKQ55_RS07575 54b1650fa8949a9cc9670e24378bc035 450 Gene3D G3DSA:2.30.42.10 222 309 9.5E-20 T 29-03-2018 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 PIRSF PIRSF000732 1 574 4.3E-218 T 29-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 Gene3D G3DSA:1.10.274.10 24 145 1.3E-35 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 3.2E-126 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.7E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 SUPERFAMILY SSF51621 249 549 8.38E-110 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 Gene3D G3DSA:3.20.20.60 250 573 1.5E-102 T 29-03-2018 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 SUPERFAMILY SSF52009 125 246 1.11E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 SUPERFAMILY SSF47831 23 143 1.44E-33 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 9.7E-268 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 Gene3D G3DSA:3.50.30.10 146 245 8.6E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-31 T 29-03-2018 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-31 T 29-03-2018 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-31 T 29-03-2018 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-31 T 29-03-2018 CKQ55_RS20635 619ea3c772fec20b66b0c4dcba1d176f 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.6E-29 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CKQ55_RS28980 52ef8695566043abb5041c26b49bd4f8 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.4E-49 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS28980 52ef8695566043abb5041c26b49bd4f8 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.3E-36 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS28980 52ef8695566043abb5041c26b49bd4f8 163 Gene3D G3DSA:2.30.110.20 1 163 6.2E-51 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS28980 52ef8695566043abb5041c26b49bd4f8 163 SUPERFAMILY SSF141452 2 160 8.37E-44 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS13875 856f35ca4ca244866cc43115f8e47c48 74 SUPERFAMILY SSF46575 15 65 2.88E-5 T 29-03-2018 CKQ55_RS13875 856f35ca4ca244866cc43115f8e47c48 74 Gene3D G3DSA:1.20.970.20 14 63 1.4E-17 T 29-03-2018 CKQ55_RS05995 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS05995 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.354 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS05995 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 Pfam PF00444 Ribosomal protein L36 1 41 3.3E-16 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS05995 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 SUPERFAMILY SSF57840 7 41 9.81E-14 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS05995 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.6E-8 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16920 4edf88a010fcb02df0aa683da4573a5d 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 2.0E-30 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CKQ55_RS16920 4edf88a010fcb02df0aa683da4573a5d 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 2.1E-67 T 29-03-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 Gene3D G3DSA:3.30.360.10 145 351 1.3E-61 T 29-03-2018 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 SMART SM00859 3 123 1.3E-24 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 Gene3D G3DSA:3.40.50.720 1 144 3.8E-17 T 29-03-2018 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 SUPERFAMILY SSF55347 135 355 1.15E-78 T 29-03-2018 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.335 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 7.4E-61 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.0E-23 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 SUPERFAMILY SSF51735 1 148 1.65E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 PIRSF PIRSF000148 1 368 1.0E-69 T 29-03-2018 CKQ55_RS14925 3535da0b49ebb53b5e6fcef5c2a67906 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 2.5E-219 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CKQ55_RS02670 05389f29e3a25048256efde8c2757bd8 115 SUPERFAMILY SSF103481 5 107 1.44E-19 T 29-03-2018 CKQ55_RS02670 05389f29e3a25048256efde8c2757bd8 115 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.1E-32 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CKQ55_RS11875 6e9d6e90b077741a05c5d5e77decba6c 548 SUPERFAMILY SSF51338 7 77 1.39E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS11875 6e9d6e90b077741a05c5d5e77decba6c 548 Gene3D G3DSA:3.20.20.140 194 503 3.8E-43 T 29-03-2018 CKQ55_RS11875 6e9d6e90b077741a05c5d5e77decba6c 548 Pfam PF07969 Amidohydrolase family 57 543 2.4E-66 T 29-03-2018 IPR013108 Amidohydrolase 3 CKQ55_RS11875 6e9d6e90b077741a05c5d5e77decba6c 548 SUPERFAMILY SSF51556 209 506 1.26E-27 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS11875 6e9d6e90b077741a05c5d5e77decba6c 548 SUPERFAMILY SSF51556 62 99 1.26E-27 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS11875 6e9d6e90b077741a05c5d5e77decba6c 548 Gene3D G3DSA:2.30.40.10 5 122 8.4E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 Gene3D G3DSA:3.90.180.10 1 172 5.9E-45 T 29-03-2018 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 SUPERFAMILY SSF51735 151 312 1.21E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 SMART SM00829 7 342 3.3E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 Gene3D G3DSA:3.40.50.20 283 341 5.7E-5 T 29-03-2018 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 2.0E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 Gene3D G3DSA:3.40.50.720 173 282 5.1E-23 T 29-03-2018 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 5.1E-26 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS13450 2753f681eed31c19bb32f171925f9f43 349 SUPERFAMILY SSF50129 13 172 8.81E-46 T 29-03-2018 IPR011032 GroES-like CKQ55_RS13535 cc99d8f9733f1d23d62bb2b52d4a8fb6 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 8.6E-79 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS13535 cc99d8f9733f1d23d62bb2b52d4a8fb6 286 SUPERFAMILY SSF51569 4 283 7.91E-91 T 29-03-2018 CKQ55_RS13535 cc99d8f9733f1d23d62bb2b52d4a8fb6 286 PIRSF PIRSF001359 1 283 2.6E-90 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS13535 cc99d8f9733f1d23d62bb2b52d4a8fb6 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 282 6.7E-90 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS13535 cc99d8f9733f1d23d62bb2b52d4a8fb6 286 Gene3D G3DSA:3.20.20.70 1 285 3.4E-93 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 Gene3D G3DSA:3.50.50.60 5 264 1.0E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 SMART SM01228 546 617 2.2E-44 T 29-03-2018 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.966 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.4E-303 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 Pfam PF01134 Glucose inhibited division protein A 8 398 8.4E-170 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 SUPERFAMILY SSF51905 97 261 1.3E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 SUPERFAMILY SSF51905 7 66 1.3E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 Gene3D G3DSA:1.10.10.10 559 629 0.15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12890 dc5adbecf23fd8305022bd6ecba8dc11 629 Pfam PF13932 GidA associated domain 403 616 2.4E-78 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.4E-36 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 Gene3D G3DSA:3.40.47.10 3 162 1.6E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 SUPERFAMILY SSF53901 3 317 1.09E-70 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 6.4E-146 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 69.557 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 5.1E-29 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CKQ55_RS00785 3bdd1fef74442a0820bf286eb8b8a5cc 317 Gene3D G3DSA:3.40.47.10 163 317 4.7E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS10270 3dfef9d4a2415f924e91e582070b7c19 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS10270 3dfef9d4a2415f924e91e582070b7c19 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.083 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS10270 3dfef9d4a2415f924e91e582070b7c19 175 Gene3D G3DSA:3.90.80.10 3 175 9.8E-54 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS10270 3dfef9d4a2415f924e91e582070b7c19 175 SUPERFAMILY SSF50324 4 175 6.8E-67 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS10270 3dfef9d4a2415f924e91e582070b7c19 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 9.2E-55 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CKQ55_RS28925 720ddf639b904f9a2aa8951e3d41bb7e 151 Pfam PF04965 Gene 25-like lysozyme 36 117 8.4E-10 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CKQ55_RS28925 720ddf639b904f9a2aa8951e3d41bb7e 151 Gene3D G3DSA:3.10.450.40 4 134 2.6E-15 T 29-03-2018 CKQ55_RS28925 720ddf639b904f9a2aa8951e3d41bb7e 151 SUPERFAMILY SSF160719 34 122 1.96E-16 T 29-03-2018 CKQ55_RS28925 720ddf639b904f9a2aa8951e3d41bb7e 151 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 8 117 4.1E-22 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CKQ55_RS08515 db681497a3b5b72fcad8661b3cc6c663 351 Gene3D G3DSA:3.10.310.10 1 174 9.1E-70 T 29-03-2018 CKQ55_RS08515 db681497a3b5b72fcad8661b3cc6c663 351 Pfam PF04303 PrpF protein 1 350 1.7E-138 T 29-03-2018 IPR007400 PrpF protein CKQ55_RS08515 db681497a3b5b72fcad8661b3cc6c663 351 SUPERFAMILY SSF54506 2 167 4.71E-61 T 29-03-2018 CKQ55_RS08515 db681497a3b5b72fcad8661b3cc6c663 351 SUPERFAMILY SSF54506 171 350 2.35E-58 T 29-03-2018 CKQ55_RS08515 db681497a3b5b72fcad8661b3cc6c663 351 Gene3D G3DSA:3.10.310.10 175 333 2.9E-53 T 29-03-2018 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 Gene3D G3DSA:3.40.50.850 1 208 1.4E-49 T 29-03-2018 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 SUPERFAMILY SSF52499 1 210 3.92E-65 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 SUPERFAMILY SSF47336 211 278 1.83E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 Pfam PF00857 Isochorismatase family 32 205 1.2E-37 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PRINTS PR01398 Isochorismatase signature 2 14 4.9E-50 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PRINTS PR01398 Isochorismatase signature 80 99 4.9E-50 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PRINTS PR01398 Isochorismatase signature 186 203 4.9E-50 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PRINTS PR01398 Isochorismatase signature 63 80 4.9E-50 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PRINTS PR01398 Isochorismatase signature 112 134 4.9E-50 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PRINTS PR01398 Isochorismatase signature 168 186 4.9E-50 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 Gene3D G3DSA:1.10.1200.10 209 283 9.0E-9 T 29-03-2018 CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 Pfam PF00550 Phosphopantetheine attachment site 215 274 1.3E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS04425 fe97c459a03f7d704adbb672c3099baf 283 PIRSF PIRSF001111 1 283 3.1E-131 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 SUPERFAMILY SSF82057 39 110 1.51E-29 T 29-03-2018 CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 7.5E-61 T 29-03-2018 IPR004624 PhnA protein CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 SUPERFAMILY SSF57783 1 36 1.21E-14 T 29-03-2018 CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 Pfam PF03831 PhnA domain 44 111 1.0E-34 T 29-03-2018 IPR013988 PhnA protein, C-terminal CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 Gene3D G3DSA:2.30.30.40 43 110 1.3E-37 T 29-03-2018 CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 Gene3D G3DSA:2.20.25.10 1 39 5.6E-17 T 29-03-2018 CKQ55_RS10820 f351631c7361e322868c7a4f947e0c03 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.4E-16 T 29-03-2018 IPR013987 PhnA protein, N-terminal CKQ55_RS13530 256e5fe1ba8ff83edaaf836fbbb6898f 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 281 4.4E-75 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS13530 256e5fe1ba8ff83edaaf836fbbb6898f 283 PIRSF PIRSF001359 1 283 2.6E-65 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS13530 256e5fe1ba8ff83edaaf836fbbb6898f 283 SUPERFAMILY SSF51569 4 283 5.68E-74 T 29-03-2018 CKQ55_RS13530 256e5fe1ba8ff83edaaf836fbbb6898f 283 Gene3D G3DSA:3.20.20.70 1 283 2.4E-74 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS28285 dfebe219f9eb484c2d81c365682195f7 198 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 195 2.7E-109 T 29-03-2018 IPR011974 Phenylacetic acid degradation protein PaaY CKQ55_RS28285 dfebe219f9eb484c2d81c365682195f7 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.4E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS28285 dfebe219f9eb484c2d81c365682195f7 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 45 8.2E-5 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS28285 dfebe219f9eb484c2d81c365682195f7 198 Gene3D G3DSA:2.160.10.10 1 175 5.4E-42 T 29-03-2018 CKQ55_RS28285 dfebe219f9eb484c2d81c365682195f7 198 SUPERFAMILY SSF51161 2 168 4.99E-46 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS06345 24ec1329997fda9f725cb49e470e937c 299 Pfam PF00348 Polyprenyl synthetase 32 264 5.2E-58 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CKQ55_RS06345 24ec1329997fda9f725cb49e470e937c 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CKQ55_RS06345 24ec1329997fda9f725cb49e470e937c 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CKQ55_RS06345 24ec1329997fda9f725cb49e470e937c 299 SUPERFAMILY SSF48576 1 277 1.15E-87 T 29-03-2018 IPR008949 Isoprenoid synthase domain CKQ55_RS06345 24ec1329997fda9f725cb49e470e937c 299 Gene3D G3DSA:1.10.600.10 264 299 0.005 T 29-03-2018 IPR008949 Isoprenoid synthase domain CKQ55_RS06345 24ec1329997fda9f725cb49e470e937c 299 Gene3D G3DSA:1.10.600.10 1 263 8.1E-85 T 29-03-2018 IPR008949 Isoprenoid synthase domain CKQ55_RS28670 b93647c3a9fabb8ad74dd60c06817696 96 Pfam PF06291 Bor protein 19 94 3.4E-31 T 29-03-2018 IPR010438 Bor GO:0009279 CKQ55_RS28670 b93647c3a9fabb8ad74dd60c06817696 96 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 95 1.0E-33 T 29-03-2018 IPR010438 Bor GO:0009279 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 Gene3D G3DSA:3.90.220.20 1 184 3.9E-29 T 29-03-2018 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 Gene3D G3DSA:3.90.220.20 185 389 4.4E-32 T 29-03-2018 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 Pfam PF01420 Type I restriction modification DNA specificity domain 7 189 1.6E-19 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 Pfam PF01420 Type I restriction modification DNA specificity domain 228 407 9.9E-15 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 SUPERFAMILY SSF116734 4 205 1.55E-31 T 29-03-2018 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 Gene3D G3DSA:1.10.287.1120 390 455 3.6E-9 T 29-03-2018 CKQ55_RS09260 07d83f7dc6a9604a9432394481da76aa 467 SUPERFAMILY SSF116734 224 434 5.4E-34 T 29-03-2018 CKQ55_RS01740 cb50730f62699ebe063301d13f5c5265 145 Gene3D G3DSA:3.40.50.510 1 145 3.1E-26 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS01740 cb50730f62699ebe063301d13f5c5265 145 Pfam PF03610 PTS system fructose IIA component 4 120 1.5E-15 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS01740 cb50730f62699ebe063301d13f5c5265 145 SUPERFAMILY SSF53062 1 132 6.67E-27 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS25815 440f0aa847ff17f240572413dc35ed1c 520 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 479 6.2E-133 T 29-03-2018 IPR010352 Protein of unknown function DUF945 CKQ55_RS06880 dc8f1a41a5c94c41f4ae223a7acaef89 355 Gene3D G3DSA:3.40.190.10 150 333 1.1E-20 T 29-03-2018 CKQ55_RS06880 dc8f1a41a5c94c41f4ae223a7acaef89 355 Gene3D G3DSA:3.40.190.10 25 149 2.1E-12 T 29-03-2018 CKQ55_RS06880 dc8f1a41a5c94c41f4ae223a7acaef89 355 Pfam PF09084 NMT1/THI5 like 63 247 4.2E-14 T 29-03-2018 IPR015168 SsuA/THI5-like CKQ55_RS06880 dc8f1a41a5c94c41f4ae223a7acaef89 355 SUPERFAMILY SSF53850 29 268 3.23E-38 T 29-03-2018 CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 Gene3D G3DSA:3.40.190.10 89 173 6.6E-15 T 29-03-2018 CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 Gene3D G3DSA:1.10.10.10 3 84 1.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 Pfam PF03466 LysR substrate binding domain 90 291 6.3E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 Gene3D G3DSA:3.40.190.10 174 260 1.3E-18 T 29-03-2018 CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 SUPERFAMILY SSF53850 90 292 8.53E-41 T 29-03-2018 CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS15690 2f3df6ecb1416b9e62a2f308917d1e68 309 SUPERFAMILY SSF46785 4 109 3.23E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17220 6f8bc1198560529b1d4d1060eff2fe75 218 Gene3D G3DSA:3.40.50.300 1 217 8.5E-48 T 29-03-2018 CKQ55_RS17220 6f8bc1198560529b1d4d1060eff2fe75 218 SMART SM00382 28 213 6.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS17220 6f8bc1198560529b1d4d1060eff2fe75 218 SUPERFAMILY SSF52540 2 215 9.59E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS17220 6f8bc1198560529b1d4d1060eff2fe75 218 Pfam PF00005 ABC transporter 19 164 1.3E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS09570 a32ad86d5d0ad0d250795b23e216ed26 147 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 54 147 2.0E-30 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS09570 a32ad86d5d0ad0d250795b23e216ed26 147 Pfam PF03230 Antirestriction protein 56 147 1.9E-35 T 29-03-2018 IPR004914 Antirestriction protein CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 SUPERFAMILY SSF100950 74 236 1.99E-28 T 29-03-2018 CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 SMART SM01134 73 234 9.1E-53 T 29-03-2018 CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 3.9E-41 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 Gene3D G3DSA:3.40.50.1360 80 234 2.4E-26 T 29-03-2018 CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 Gene3D G3DSA:1.10.10.10 1 79 8.2E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 58 3.6E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS02475 ab177fa67015dd0ae74be9844d437b2d 252 SMART SM00420 8 57 9.7E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS26750 d4b6852d711a330d9f6e7bc3d0dd1767 273 Gene3D G3DSA:1.10.10.10 40 83 6.9E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26750 d4b6852d711a330d9f6e7bc3d0dd1767 273 Gene3D G3DSA:1.10.10.60 8 39 2.1E-6 T 29-03-2018 CKQ55_RS26750 d4b6852d711a330d9f6e7bc3d0dd1767 273 SUPERFAMILY SSF46689 24 107 4.57E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS31750 71bcf101b5ad0d9d3c45376b2f551352 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.6E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31750 71bcf101b5ad0d9d3c45376b2f551352 270 Gene3D G3DSA:3.60.15.10 30 270 8.8E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31750 71bcf101b5ad0d9d3c45376b2f551352 270 SMART SM00849 74 250 1.3E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31750 71bcf101b5ad0d9d3c45376b2f551352 270 SUPERFAMILY SSF56281 51 261 4.6E-31 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS03875 d6ecfff71ca64967b192fbae2425043b 304 Gene3D G3DSA:3.40.50.2300 28 132 9.3E-20 T 29-03-2018 CKQ55_RS03875 d6ecfff71ca64967b192fbae2425043b 304 SUPERFAMILY SSF53822 14 302 9.97E-73 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS03875 d6ecfff71ca64967b192fbae2425043b 304 Gene3D G3DSA:3.40.50.2300 133 303 1.3E-31 T 29-03-2018 CKQ55_RS03875 d6ecfff71ca64967b192fbae2425043b 304 Pfam PF13407 Periplasmic binding protein domain 30 275 1.4E-51 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS07795 99160c679de500c1c609a7ee7fd6b9a3 161 PIRSF PIRSF006291 1 158 3.9E-27 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 CKQ55_RS07795 99160c679de500c1c609a7ee7fd6b9a3 161 Pfam PF04612 Type II secretion system (T2SS), protein M 1 157 1.9E-39 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 CKQ55_RS07795 99160c679de500c1c609a7ee7fd6b9a3 161 SUPERFAMILY SSF103054 82 157 1.83E-14 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CKQ55_RS07795 99160c679de500c1c609a7ee7fd6b9a3 161 Gene3D G3DSA:3.30.1360.100 83 156 2.1E-16 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CKQ55_RS31665 cc13452180214aa8b098d80e3b99eb7a 164 SMART SM00318 22 150 7.4E-33 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CKQ55_RS31665 cc13452180214aa8b098d80e3b99eb7a 164 Pfam PF00565 Staphylococcal nuclease homologue 54 150 1.5E-21 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CKQ55_RS31665 cc13452180214aa8b098d80e3b99eb7a 164 SUPERFAMILY SSF50199 19 157 1.7E-34 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CKQ55_RS31665 cc13452180214aa8b098d80e3b99eb7a 164 Gene3D G3DSA:2.40.50.90 22 164 1.8E-31 T 29-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 234 5.8E-16 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 SUPERFAMILY SSF49584 143 236 7.85E-19 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 Gene3D G3DSA:2.60.40.10 24 150 1.9E-39 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 PRINTS PR00969 Pili chaperone signature 166 181 1.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 PRINTS PR00969 Pili chaperone signature 131 146 1.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 PRINTS PR00969 Pili chaperone signature 74 95 1.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 PRINTS PR00969 Pili chaperone signature 25 34 1.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 PRINTS PR00969 Pili chaperone signature 102 119 1.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 Gene3D G3DSA:2.60.40.10 152 242 1.4E-23 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 149 6.4E-46 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 101 118 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS09655 f24cebf52fb1d76601c6cbbf0bb3d305 242 SUPERFAMILY SSF49354 19 149 1.47E-41 T 29-03-2018 IPR008962 PapD-like CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 SUPERFAMILY SSF50129 1 96 6.24E-31 T 29-03-2018 IPR011032 GroES-like CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 SMART SM00883 2 95 1.0E-48 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 Gene3D G3DSA:2.30.33.40 1 96 5.6E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.4E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.875 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS10715 b5231a381ca26fafcc4580be09ac1e7b 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 8.6E-30 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CKQ55_RS13630 700fe20d90cf63b7b2549cfe45d9a030 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 335 3.6E-183 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CKQ55_RS13630 700fe20d90cf63b7b2549cfe45d9a030 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 3.2E-133 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CKQ55_RS13630 700fe20d90cf63b7b2549cfe45d9a030 336 PIRSF PIRSF004532 1 333 1.2E-141 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CKQ55_RS13630 700fe20d90cf63b7b2549cfe45d9a030 336 Gene3D G3DSA:3.30.540.10 1 151 6.9E-59 T 29-03-2018 CKQ55_RS13630 700fe20d90cf63b7b2549cfe45d9a030 336 Gene3D G3DSA:3.30.540.10 152 336 4.6E-53 T 29-03-2018 CKQ55_RS13630 700fe20d90cf63b7b2549cfe45d9a030 336 SUPERFAMILY SSF56655 1 325 2.26E-110 T 29-03-2018 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Gene3D G3DSA:3.40.50.2300 398 483 4.4E-12 T 29-03-2018 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 SUPERFAMILY SSF55804 490 627 1.92E-25 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 SUPERFAMILY SSF63520 294 391 8.11E-22 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Gene3D G3DSA:1.10.1790.10 278 392 5.1E-21 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Pfam PF00874 PRD domain 300 386 2.7E-19 T 29-03-2018 IPR011608 PRD domain GO:0006355 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Pfam PF05043 Mga helix-turn-helix domain 87 165 1.4E-9 T 29-03-2018 IPR007737 Mga helix-turn-helix domain CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 SUPERFAMILY SSF46785 6 64 5.94E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Gene3D G3DSA:3.40.930.10 490 631 6.2E-22 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 496 625 1.4E-17 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Gene3D G3DSA:1.10.10.10 87 153 4.1E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Gene3D G3DSA:1.10.10.10 4 68 7.3E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 Pfam PF08279 HTH domain 7 63 1.1E-10 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CKQ55_RS10155 362341027c801faa5daa57d40fc9bc60 636 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.2E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.2E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.2E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.2E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.2E-29 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 3.1E-126 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.7E-98 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS20750 884259c84da36a347d63b03936d474b1 411 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 38.018 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CKQ55_RS26880 3888479ec8aa60f39aa7636735c123ed 198 Pfam PF02525 Flavodoxin-like fold 34 195 3.4E-22 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS26880 3888479ec8aa60f39aa7636735c123ed 198 SUPERFAMILY SSF52218 34 197 2.37E-26 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS26880 3888479ec8aa60f39aa7636735c123ed 198 Gene3D G3DSA:3.40.50.360 23 198 3.7E-27 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS08795 9ee6bfa170b255e5e35ff7e0281bd516 425 Pfam PF07670 Nucleoside recognition 99 195 3.0E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS08795 9ee6bfa170b255e5e35ff7e0281bd516 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-22 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CKQ55_RS08795 9ee6bfa170b255e5e35ff7e0281bd516 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 3.4E-76 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CKQ55_RS08795 9ee6bfa170b255e5e35ff7e0281bd516 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 422 4.6E-151 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 Gene3D G3DSA:3.40.50.720 2 108 8.5E-28 T 29-03-2018 CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 SUPERFAMILY SSF51735 100 284 1.75E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 283 1.3E-56 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 Gene3D G3DSA:3.40.50.720 109 284 7.0E-49 T 29-03-2018 CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 SUPERFAMILY SSF52283 16 116 2.84E-28 T 29-03-2018 CKQ55_RS14505 5918b9c85c413129124f195df055cc48 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 314 2.2E-26 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CKQ55_RS16270 b62c78e19479b2ed5952bc237b635529 315 Pfam PF00294 pfkB family carbohydrate kinase 5 301 6.7E-48 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS16270 b62c78e19479b2ed5952bc237b635529 315 Gene3D G3DSA:3.40.1190.20 3 315 2.1E-63 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS16270 b62c78e19479b2ed5952bc237b635529 315 SUPERFAMILY SSF53613 2 311 1.22E-73 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS23105 00a18d52676562fc16e185bc40f32924 201 Gene3D G3DSA:3.40.30.10 1 85 9.8E-15 T 29-03-2018 CKQ55_RS23105 00a18d52676562fc16e185bc40f32924 201 Gene3D G3DSA:1.20.1050.10 86 198 1.2E-5 T 29-03-2018 CKQ55_RS23105 00a18d52676562fc16e185bc40f32924 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 3.4E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS23105 00a18d52676562fc16e185bc40f32924 201 SUPERFAMILY SSF52833 1 84 1.92E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS09025 c5ce007792921377759a31996a33e7bb 200 Pfam PF01081 KDPG and KHG aldolase 2 180 9.6E-27 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS09025 c5ce007792921377759a31996a33e7bb 200 SUPERFAMILY SSF51569 3 197 1.34E-55 T 29-03-2018 CKQ55_RS09025 c5ce007792921377759a31996a33e7bb 200 Gene3D G3DSA:3.20.20.70 1 199 1.6E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS27735 b70797c9fc278ba05dd46788db4cd3d7 496 SUPERFAMILY SSF103473 2 191 5.32E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27735 b70797c9fc278ba05dd46788db4cd3d7 496 SUPERFAMILY SSF103473 465 482 5.32E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27735 b70797c9fc278ba05dd46788db4cd3d7 496 SUPERFAMILY SSF103473 242 413 5.32E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27735 b70797c9fc278ba05dd46788db4cd3d7 496 Pfam PF07690 Major Facilitator Superfamily 11 403 2.0E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS27735 b70797c9fc278ba05dd46788db4cd3d7 496 Gene3D G3DSA:1.20.1250.20 253 495 9.0E-22 T 29-03-2018 CKQ55_RS27735 b70797c9fc278ba05dd46788db4cd3d7 496 Gene3D G3DSA:1.20.1250.20 2 194 3.7E-25 T 29-03-2018 CKQ55_RS23460 7678a214bcb9340ec4ff71b1feca4150 222 Gene3D G3DSA:1.10.3720.10 5 220 1.6E-45 T 29-03-2018 CKQ55_RS23460 7678a214bcb9340ec4ff71b1feca4150 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 4.1E-35 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS23460 7678a214bcb9340ec4ff71b1feca4150 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 7.8E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS23460 7678a214bcb9340ec4ff71b1feca4150 222 SUPERFAMILY SSF161098 13 200 1.7E-51 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04985 9429a51aeb82cd35c7ac52cf9ce64b86 342 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 3.0E-38 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS04985 9429a51aeb82cd35c7ac52cf9ce64b86 342 Gene3D G3DSA:3.20.20.150 6 335 2.8E-50 T 29-03-2018 CKQ55_RS04985 9429a51aeb82cd35c7ac52cf9ce64b86 342 SUPERFAMILY SSF51658 8 323 1.2E-64 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS04985 9429a51aeb82cd35c7ac52cf9ce64b86 342 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 2.6E-21 T 29-03-2018 IPR011418 AP endonuclease, family 2, C-terminal CKQ55_RS14575 417def8ba6c1886494b56f1b67222a27 327 SUPERFAMILY SSF53448 7 236 3.89E-38 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14575 417def8ba6c1886494b56f1b67222a27 327 Gene3D G3DSA:3.90.550.10 3 231 1.2E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14575 417def8ba6c1886494b56f1b67222a27 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 327 62.114 T 29-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 CKQ55_RS14575 417def8ba6c1886494b56f1b67222a27 327 Pfam PF00535 Glycosyl transferase family 2 11 172 9.1E-33 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS05780 afd2f79c5f3928a9f2b38680ef0ba37f 218 SUPERFAMILY SSF52266 39 213 3.66E-52 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CKQ55_RS05780 afd2f79c5f3928a9f2b38680ef0ba37f 218 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 40 50 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CKQ55_RS05780 afd2f79c5f3928a9f2b38680ef0ba37f 218 Gene3D G3DSA:3.40.50.1110 36 217 1.0E-38 T 29-03-2018 CKQ55_RS05780 afd2f79c5f3928a9f2b38680ef0ba37f 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 42 197 9.0E-27 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CKQ55_RS17870 009722819d98d9a876a00dcd73fcbce0 233 Gene3D G3DSA:2.40.10.220 106 226 6.5E-13 T 29-03-2018 CKQ55_RS18335 2529d7ec6e7971babb7092ad38b71ce4 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 5.0E-24 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CKQ55_RS18335 2529d7ec6e7971babb7092ad38b71ce4 351 Gene3D G3DSA:3.30.420.180 221 351 5.0E-28 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CKQ55_RS18335 2529d7ec6e7971babb7092ad38b71ce4 351 Pfam PF11761 Cobalamin biosynthesis central region 140 214 4.3E-8 T 29-03-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CKQ55_RS18335 2529d7ec6e7971babb7092ad38b71ce4 351 SUPERFAMILY SSF159672 6 238 7.06E-58 T 29-03-2018 CKQ55_RS18335 2529d7ec6e7971babb7092ad38b71ce4 351 Pfam PF11760 Cobalamin synthesis G N-terminal 55 134 4.4E-35 T 29-03-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CKQ55_RS18335 2529d7ec6e7971babb7092ad38b71ce4 351 SUPERFAMILY SSF159664 224 349 3.14E-31 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CKQ55_RS17720 dec0c6ee850ac7b1b70c7b3840d6b872 229 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 199 3.2E-60 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS17720 dec0c6ee850ac7b1b70c7b3840d6b872 229 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS17720 dec0c6ee850ac7b1b70c7b3840d6b872 229 SUPERFAMILY SSF51366 3 205 1.51E-51 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS17720 dec0c6ee850ac7b1b70c7b3840d6b872 229 Gene3D G3DSA:3.20.20.70 1 219 9.2E-57 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS17720 dec0c6ee850ac7b1b70c7b3840d6b872 229 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS17860 e6352eefd53d1f53a3deaee4b9702d12 238 Gene3D G3DSA:3.20.20.450 8 234 3.0E-28 T 29-03-2018 IPR001633 EAL domain CKQ55_RS17860 e6352eefd53d1f53a3deaee4b9702d12 238 SUPERFAMILY SSF141868 19 224 4.45E-26 T 29-03-2018 IPR001633 EAL domain CKQ55_RS17860 e6352eefd53d1f53a3deaee4b9702d12 238 SMART SM00052 4 230 8.7E-8 T 29-03-2018 IPR001633 EAL domain CKQ55_RS17860 e6352eefd53d1f53a3deaee4b9702d12 238 Pfam PF00563 EAL domain 17 223 4.6E-25 T 29-03-2018 IPR001633 EAL domain CKQ55_RS02015 a2467918ca678f1a336bf1c3406c2935 144 SMART SM01321 11 129 4.1E-42 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS02015 a2467918ca678f1a336bf1c3406c2935 144 Pfam PF01797 Transposase IS200 like 11 129 5.2E-39 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS02015 a2467918ca678f1a336bf1c3406c2935 144 Gene3D G3DSA:3.30.70.1290 3 137 5.5E-25 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS02015 a2467918ca678f1a336bf1c3406c2935 144 SUPERFAMILY SSF143422 4 130 1.96E-44 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS06415 a2467918ca678f1a336bf1c3406c2935 144 SMART SM01321 11 129 4.1E-42 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS06415 a2467918ca678f1a336bf1c3406c2935 144 Pfam PF01797 Transposase IS200 like 11 129 5.2E-39 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS06415 a2467918ca678f1a336bf1c3406c2935 144 Gene3D G3DSA:3.30.70.1290 3 137 5.5E-25 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS06415 a2467918ca678f1a336bf1c3406c2935 144 SUPERFAMILY SSF143422 4 130 1.96E-44 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS19890 a2467918ca678f1a336bf1c3406c2935 144 SMART SM01321 11 129 4.1E-42 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS19890 a2467918ca678f1a336bf1c3406c2935 144 Pfam PF01797 Transposase IS200 like 11 129 5.2E-39 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS19890 a2467918ca678f1a336bf1c3406c2935 144 Gene3D G3DSA:3.30.70.1290 3 137 5.5E-25 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS19890 a2467918ca678f1a336bf1c3406c2935 144 SUPERFAMILY SSF143422 4 130 1.96E-44 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS07490 cfc1f72d123eaac05669e3989f45651b 137 Pfam PF00472 RF-1 domain 8 132 3.4E-23 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CKQ55_RS07490 cfc1f72d123eaac05669e3989f45651b 137 SUPERFAMILY SSF75620 7 113 1.45E-11 T 29-03-2018 CKQ55_RS07490 cfc1f72d123eaac05669e3989f45651b 137 Gene3D G3DSA:3.30.160.20 1 137 7.7E-39 T 29-03-2018 CKQ55_RS07490 cfc1f72d123eaac05669e3989f45651b 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CKQ55_RS17780 940dd5cc23fb94ad4457943d0630701d 342 Pfam PF13533 Biotin-lipoyl like 49 95 9.3E-15 T 29-03-2018 CKQ55_RS17780 940dd5cc23fb94ad4457943d0630701d 342 SUPERFAMILY SSF111369 119 155 9.81E-10 T 29-03-2018 CKQ55_RS17780 940dd5cc23fb94ad4457943d0630701d 342 SUPERFAMILY SSF111369 187 295 9.81E-10 T 29-03-2018 CKQ55_RS17780 940dd5cc23fb94ad4457943d0630701d 342 Gene3D G3DSA:1.20.1600.10 31 336 3.7E-25 T 29-03-2018 CKQ55_RS17780 940dd5cc23fb94ad4457943d0630701d 342 Pfam PF13437 HlyD family secretion protein 211 294 6.8E-12 T 29-03-2018 CKQ55_RS17780 940dd5cc23fb94ad4457943d0630701d 342 SUPERFAMILY SSF111369 46 132 1.83E-14 T 29-03-2018 CKQ55_RS20670 c66e79798581c47d9fbcb842051e1154 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 5.7E-102 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter CKQ55_RS20670 c66e79798581c47d9fbcb842051e1154 332 PIRSF PIRSF026166 1 332 4.8E-134 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter CKQ55_RS21195 37bbc331c8cd4f526d4c06e7c9a58820 849 SUPERFAMILY SSF141729 58 171 1.44E-29 T 29-03-2018 CKQ55_RS21195 37bbc331c8cd4f526d4c06e7c9a58820 849 Pfam PF13954 PapC N-terminal domain 34 180 5.5E-43 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS21195 37bbc331c8cd4f526d4c06e7c9a58820 849 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CKQ55_RS21195 37bbc331c8cd4f526d4c06e7c9a58820 849 Pfam PF00577 Outer membrane usher protein 197 756 4.3E-197 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS21195 37bbc331c8cd4f526d4c06e7c9a58820 849 Pfam PF13953 PapC C-terminal domain 766 833 2.7E-24 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 SUPERFAMILY SSF53067 252 485 3.02E-39 T 29-03-2018 CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 Gene3D G3DSA:3.30.420.40 2 244 4.5E-53 T 29-03-2018 CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 SUPERFAMILY SSF53067 3 250 3.89E-55 T 29-03-2018 CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 PIRSF PIRSF000538 1 489 2.4E-82 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 Gene3D G3DSA:3.30.420.40 245 491 5.8E-37 T 29-03-2018 CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 247 2.8E-61 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS03860 ee5be4607cf3156b1ec903b78dacab0f 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 438 7.8E-16 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 Gene3D G3DSA:1.20.1250.20 262 456 1.8E-24 T 29-03-2018 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 1.6E-9 T 29-03-2018 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.6E-9 T 29-03-2018 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 1.6E-9 T 29-03-2018 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.6E-9 T 29-03-2018 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.6E-9 T 29-03-2018 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 SUPERFAMILY SSF103473 251 451 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 SUPERFAMILY SSF103473 7 195 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 Pfam PF07690 Major Facilitator Superfamily 22 412 6.4E-51 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS23885 a6dd586a07d1ca2d9a6bbe9c3a141edf 457 Gene3D G3DSA:1.20.1250.20 12 203 1.0E-26 T 29-03-2018 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 SUPERFAMILY SSF51215 37 170 5.75E-11 T 29-03-2018 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 Gene3D G3DSA:1.10.10.60 176 238 5.7E-7 T 29-03-2018 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 Pfam PF12833 Helix-turn-helix domain 208 286 7.9E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 Gene3D G3DSA:2.60.120.280 21 174 2.9E-18 T 29-03-2018 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 Gene3D G3DSA:1.10.10.60 240 289 1.1E-10 T 29-03-2018 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 SMART SM00342 202 285 3.9E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS08895 d7d9a017d68023943ad4f029efb5172f 289 SUPERFAMILY SSF46689 240 287 1.79E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS11305 6301e87ef4132d080e5767b3f105eb26 315 Pfam PF04198 Putative sugar-binding domain 59 315 1.2E-76 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CKQ55_RS11305 6301e87ef4132d080e5767b3f105eb26 315 Gene3D G3DSA:3.40.50.1360 53 315 6.9E-35 T 29-03-2018 CKQ55_RS11305 6301e87ef4132d080e5767b3f105eb26 315 Pfam PF13936 Helix-turn-helix domain 12 45 1.5E-8 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain CKQ55_RS11305 6301e87ef4132d080e5767b3f105eb26 315 Gene3D G3DSA:1.10.10.60 1 52 9.0E-21 T 29-03-2018 CKQ55_RS11305 6301e87ef4132d080e5767b3f105eb26 315 SUPERFAMILY SSF100950 62 315 5.78E-63 T 29-03-2018 CKQ55_RS11305 6301e87ef4132d080e5767b3f105eb26 315 SUPERFAMILY SSF46689 7 54 6.63E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 SUPERFAMILY SSF52540 360 519 1.65E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 SMART SM00382 34 228 5.0E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 SMART SM00382 366 533 6.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 Gene3D G3DSA:3.40.50.300 293 528 1.0E-32 T 29-03-2018 CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 SUPERFAMILY SSF52540 24 226 1.6E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 Pfam PF00005 ABC transporter 367 487 6.9E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 Pfam PF00005 ABC transporter 34 175 2.5E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14065 94a8ef1efa469f82615bf7cee2a2348e 539 Gene3D G3DSA:3.40.50.300 5 278 1.4E-38 T 29-03-2018 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 29-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 Gene3D G3DSA:1.10.520.20 2 106 1.0E-29 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 SUPERFAMILY SSF47928 3 104 9.02E-28 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 1.7E-51 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.746 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12920 efd3ef779d53e2d12935bd390259a4e9 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.0E-66 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS00810 c0d08c19d8c06ce338d01ec0cdf88df8 381 SUPERFAMILY SSF53474 161 380 1.52E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS00810 c0d08c19d8c06ce338d01ec0cdf88df8 381 SUPERFAMILY SSF53474 35 134 1.52E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS00810 c0d08c19d8c06ce338d01ec0cdf88df8 381 Pfam PF12715 Abhydrolase family 55 326 1.9E-15 T 29-03-2018 IPR025890 Abhydrolase, bacterial CKQ55_RS00810 c0d08c19d8c06ce338d01ec0cdf88df8 381 Gene3D G3DSA:3.40.50.1820 58 381 3.1E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 8.9E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 Pfam PF07702 UTRA domain 95 231 1.1E-18 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 SUPERFAMILY SSF46785 4 76 1.17E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 SMART SM00345 13 72 9.7E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 SUPERFAMILY SSF64288 60 236 8.01E-27 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 Gene3D G3DSA:3.40.1410.10 83 240 2.9E-22 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 Gene3D G3DSA:1.10.10.10 1 74 5.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01735 6c2cf715aa93981b99ec9cfb12c2f1de 243 SMART SM00866 90 232 8.1E-12 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS16570 9e2189be3c7361eccdbe120ac1d96a48 184 SUPERFAMILY SSF46785 41 159 1.51E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16570 9e2189be3c7361eccdbe120ac1d96a48 184 Pfam PF03551 Transcriptional regulator PadR-like family 45 110 8.5E-15 T 29-03-2018 IPR005149 Transcription regulator PadR, N-terminal CKQ55_RS16570 9e2189be3c7361eccdbe120ac1d96a48 184 Gene3D G3DSA:1.10.10.10 24 159 2.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00525 e4c929dcb10a885a69d909be15459999 404 Gene3D G3DSA:1.20.1250.20 217 402 3.1E-12 T 29-03-2018 CKQ55_RS00525 e4c929dcb10a885a69d909be15459999 404 SUPERFAMILY SSF103473 18 398 1.07E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS00525 e4c929dcb10a885a69d909be15459999 404 Pfam PF07690 Major Facilitator Superfamily 26 276 6.0E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS00525 e4c929dcb10a885a69d909be15459999 404 Gene3D G3DSA:1.20.1250.20 9 216 2.2E-19 T 29-03-2018 CKQ55_RS26780 d720784a68e9a5d69f6c040f04f66f28 158 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 132 3.8E-45 T 29-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family CKQ55_RS26780 d720784a68e9a5d69f6c040f04f66f28 158 Gene3D G3DSA:2.60.120.10 5 137 1.8E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS26780 d720784a68e9a5d69f6c040f04f66f28 158 SUPERFAMILY SSF51182 25 121 4.74E-17 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS05080 1369fcb50b29bc1b02e7cf0a6bec8a97 112 SUPERFAMILY SSF47413 17 74 1.89E-10 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS05080 1369fcb50b29bc1b02e7cf0a6bec8a97 112 Pfam PF13560 Helix-turn-helix domain 20 74 7.5E-9 T 29-03-2018 CKQ55_RS05080 1369fcb50b29bc1b02e7cf0a6bec8a97 112 SMART SM00530 23 78 2.8E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS05080 1369fcb50b29bc1b02e7cf0a6bec8a97 112 Gene3D G3DSA:1.10.260.40 38 92 9.0E-8 T 29-03-2018 CKQ55_RS05080 1369fcb50b29bc1b02e7cf0a6bec8a97 112 Gene3D G3DSA:1.10.10.60 4 37 1.7E-5 T 29-03-2018 CKQ55_RS03265 cef312151029dfe09b551bdf58a6aa54 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 9.4E-58 T 29-03-2018 IPR006214 Bax inhibitor 1-related CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.2E-89 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 SUPERFAMILY SSF52141 5 220 2.4E-95 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 Gene3D G3DSA:3.40.470.10 1 229 1.6E-104 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 SMART SM00986 49 210 9.4E-42 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.325 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 2.3E-26 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CKQ55_RS19895 0c679e233a1b044be220f898631bb21a 229 SMART SM00987 49 210 9.4E-42 T 29-03-2018 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 SUPERFAMILY SSF53850 89 297 1.63E-40 T 29-03-2018 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 Gene3D G3DSA:1.10.10.10 1 89 4.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 Gene3D G3DSA:3.40.190.10 90 176 2.4E-16 T 29-03-2018 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 Gene3D G3DSA:3.40.190.10 177 266 2.6E-17 T 29-03-2018 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 Pfam PF03466 LysR substrate binding domain 89 295 4.6E-37 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS04965 1c22acaedefb94c18eef84c81ae6d382 302 SUPERFAMILY SSF46785 4 87 4.13E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13755 6c6c10304ca88d3bd83441e9eb2b885b 358 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 15 358 1.8E-177 T 29-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CKQ55_RS13755 6c6c10304ca88d3bd83441e9eb2b885b 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 87 327 2.3E-52 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CKQ55_RS13755 6c6c10304ca88d3bd83441e9eb2b885b 358 SUPERFAMILY SSF53756 15 358 3.98E-84 T 29-03-2018 CKQ55_RS13755 6c6c10304ca88d3bd83441e9eb2b885b 358 Gene3D G3DSA:3.40.50.2000 14 173 6.6E-38 T 29-03-2018 CKQ55_RS13755 6c6c10304ca88d3bd83441e9eb2b885b 358 Gene3D G3DSA:3.40.50.2000 177 358 3.5E-41 T 29-03-2018 CKQ55_RS15380 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.005 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CKQ55_RS15380 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 SUPERFAMILY SSF57716 2 101 5.63E-37 T 29-03-2018 CKQ55_RS15380 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15380 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-26 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15380 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 Gene3D G3DSA:4.10.830.10 1 101 3.4E-33 T 29-03-2018 CKQ55_RS12545 28751d5e39a0e99dacff0ea211681019 803 SUPERFAMILY SSF56801 459 721 9.68E-21 T 29-03-2018 CKQ55_RS12545 28751d5e39a0e99dacff0ea211681019 803 SUPERFAMILY SSF53720 100 309 3.27E-15 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS12545 28751d5e39a0e99dacff0ea211681019 803 Gene3D G3DSA:3.40.50.980 452 629 2.5E-12 T 29-03-2018 CKQ55_RS12545 28751d5e39a0e99dacff0ea211681019 803 Pfam PF05893 Acyl-CoA reductase (LuxC) 44 412 3.7E-102 T 29-03-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 CKQ55_RS12545 28751d5e39a0e99dacff0ea211681019 803 Gene3D G3DSA:3.40.605.10 53 255 1.9E-17 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 SMART SM00421 143 200 9.4E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 Pfam PF00072 Response regulator receiver domain 4 116 6.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 SMART SM00448 2 115 1.7E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 SUPERFAMILY SSF52172 1 119 1.99E-30 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 SUPERFAMILY SSF46894 132 206 1.22E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 7.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 7.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 7.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 Gene3D G3DSA:1.10.10.10 127 209 1.3E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 5.3E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS06680 36c9fe80d35d8befdaadb38eaa903df4 209 Gene3D G3DSA:3.40.50.2300 1 126 9.4E-32 T 29-03-2018 CKQ55_RS09180 792f6682fc4607a8a4debf2bcb34283a 79 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 73 3.0E-20 T 29-03-2018 IPR018680 Protein of unknown function DUF2164 CKQ55_RS18970 d231e7a3cecb9106e1002200e4f3babe 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 184 1.6E-10 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS18970 d231e7a3cecb9106e1002200e4f3babe 789 SUPERFAMILY SSF56935 49 457 5.13E-83 T 29-03-2018 CKQ55_RS18970 d231e7a3cecb9106e1002200e4f3babe 789 SUPERFAMILY SSF56935 485 789 5.13E-83 T 29-03-2018 CKQ55_RS18970 d231e7a3cecb9106e1002200e4f3babe 789 Gene3D G3DSA:2.40.170.20 197 789 1.2E-66 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS18970 d231e7a3cecb9106e1002200e4f3babe 789 Gene3D G3DSA:2.170.130.10 61 196 9.3E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS18970 d231e7a3cecb9106e1002200e4f3babe 789 Pfam PF00593 TonB dependent receptor 358 787 6.5E-37 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS13010 60754ea2b6c68b24944ab378b714ee6f 445 PIRSF PIRSF005353 4 444 1.2E-174 T 29-03-2018 IPR026033 Purine permease PbuG-like CKQ55_RS13010 60754ea2b6c68b24944ab378b714ee6f 445 Pfam PF00860 Permease family 31 404 1.5E-40 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS00645 3e8560a36ee0e026f937e4dc1b42a47f 233 SUPERFAMILY SSF52540 5 224 2.92E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS00645 3e8560a36ee0e026f937e4dc1b42a47f 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.6E-111 T 29-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CKQ55_RS00645 3e8560a36ee0e026f937e4dc1b42a47f 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS00645 3e8560a36ee0e026f937e4dc1b42a47f 233 Pfam PF00005 ABC transporter 25 173 4.6E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS00645 3e8560a36ee0e026f937e4dc1b42a47f 233 SMART SM00382 34 222 1.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS00645 3e8560a36ee0e026f937e4dc1b42a47f 233 Gene3D G3DSA:3.40.50.300 1 231 2.8E-65 T 29-03-2018 CKQ55_RS01585 7fb33d9c2599b42ec48504c3714ce9ab 259 PIRSF PIRSF039085 4 256 1.1E-104 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS01585 7fb33d9c2599b42ec48504c3714ce9ab 259 Gene3D G3DSA:3.40.50.300 4 258 2.4E-74 T 29-03-2018 CKQ55_RS01585 7fb33d9c2599b42ec48504c3714ce9ab 259 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01585 7fb33d9c2599b42ec48504c3714ce9ab 259 SMART SM00382 32 228 1.5E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01585 7fb33d9c2599b42ec48504c3714ce9ab 259 Pfam PF00005 ABC transporter 23 180 8.4E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS01585 7fb33d9c2599b42ec48504c3714ce9ab 259 SUPERFAMILY SSF52540 8 250 2.97E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 SMART SM00363 18 83 9.6E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 3.0E-30 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 SUPERFAMILY SSF55120 78 323 2.26E-77 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 SUPERFAMILY SSF55174 17 70 5.21E-11 T 29-03-2018 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 Gene3D G3DSA:3.30.2350.10 83 316 7.4E-67 T 29-03-2018 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 Gene3D G3DSA:3.10.290.10 2 76 2.0E-21 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 Pfam PF01479 S4 domain 18 65 6.7E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS19810 b9a941cf38ef0d7040a05ac61bd904ac 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 1.4E-108 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 Pfam PF01039 Carboxyl transferase domain 92 267 7.1E-17 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.11 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 SUPERFAMILY SSF52096 23 284 4.04E-91 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 Gene3D G3DSA:3.90.226.10 11 288 8.0E-73 T 29-03-2018 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 8.3E-152 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 3.4E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 3.4E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 3.4E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 3.4E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS20935 9b4f9866083e415ca5aa1550be224959 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 3.4E-39 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CKQ55_RS16385 c95250cc4018968fb4e91d59614d1df8 495 SMART SM00858 10 81 4.2E-18 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CKQ55_RS16385 c95250cc4018968fb4e91d59614d1df8 495 Pfam PF08666 SAF domain 10 81 8.1E-16 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CKQ55_RS16385 c95250cc4018968fb4e91d59614d1df8 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 2.9E-155 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CKQ55_RS13740 ee1dbeebd33d1338530f900b1d1631b4 329 SUPERFAMILY SSF53448 5 228 1.03E-45 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS13740 ee1dbeebd33d1338530f900b1d1631b4 329 Pfam PF00535 Glycosyl transferase family 2 8 132 2.1E-24 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS13740 ee1dbeebd33d1338530f900b1d1631b4 329 Gene3D G3DSA:3.90.550.10 2 268 2.5E-44 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 Gene3D G3DSA:3.20.20.70 24 200 2.2E-12 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 9.2E-111 T 29-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 PIRSF PIRSF000370 1 223 3.3E-73 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 7.9E-13 T 29-03-2018 CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 39.462 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 SUPERFAMILY SSF102114 24 118 5.62E-7 T 29-03-2018 CKQ55_RS18610 0383b9d2a60cfec76ac852087075c6a1 223 Pfam PF04055 Radical SAM superfamily 27 184 2.2E-9 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS18520 1fe9461c85b6f23500a8460f369ed9a4 455 Gene3D G3DSA:3.30.1850.10 3 111 8.9E-48 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CKQ55_RS18520 1fe9461c85b6f23500a8460f369ed9a4 455 Pfam PF03641 Possible lysine decarboxylase 190 329 3.5E-34 T 29-03-2018 IPR031100 LOG family CKQ55_RS18520 1fe9461c85b6f23500a8460f369ed9a4 455 Gene3D G3DSA:3.40.50.450 124 453 6.0E-102 T 29-03-2018 CKQ55_RS18520 1fe9461c85b6f23500a8460f369ed9a4 455 SUPERFAMILY SSF102405 118 330 2.29E-42 T 29-03-2018 CKQ55_RS18520 1fe9461c85b6f23500a8460f369ed9a4 455 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 3.0E-46 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CKQ55_RS18520 1fe9461c85b6f23500a8460f369ed9a4 455 Pfam PF11892 Domain of unknown function (DUF3412) 333 453 6.6E-55 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 SUPERFAMILY SSF52172 2 126 1.99E-36 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 Gene3D G3DSA:1.10.10.10 130 238 1.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 SMART SM00862 156 232 3.7E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 Gene3D G3DSA:3.40.50.2300 1 129 7.4E-32 T 29-03-2018 CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 SMART SM00448 4 114 4.1E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.5E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 Pfam PF00072 Response regulator receiver domain 6 113 4.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS08690 96b7e20e9fabc104071e57da3071393c 238 SUPERFAMILY SSF46894 136 234 6.24E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS22915 e0cf777c53e79884a23becffae7e570d 157 SMART SM00871 1 153 6.5E-24 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CKQ55_RS22915 e0cf777c53e79884a23becffae7e570d 157 SUPERFAMILY SSF55136 1 154 9.42E-35 T 29-03-2018 CKQ55_RS22915 e0cf777c53e79884a23becffae7e570d 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 2.2E-21 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CKQ55_RS22915 e0cf777c53e79884a23becffae7e570d 157 Gene3D G3DSA:3.20.80.10 1 156 3.9E-23 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CKQ55_RS22915 e0cf777c53e79884a23becffae7e570d 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 39.765 T 29-03-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 CKQ55_RS24345 e22fb0e34e079c7e3f00e8653749752c 399 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 393 3.4E-191 T 29-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 CKQ55_RS24345 e22fb0e34e079c7e3f00e8653749752c 399 Gene3D G3DSA:3.40.50.1100 52 189 1.9E-29 T 29-03-2018 CKQ55_RS24345 e22fb0e34e079c7e3f00e8653749752c 399 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 392 2.6E-194 T 29-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 CKQ55_RS24345 e22fb0e34e079c7e3f00e8653749752c 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 376 2.4E-54 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS24345 e22fb0e34e079c7e3f00e8653749752c 399 Gene3D G3DSA:3.40.50.1100 190 390 2.7E-24 T 29-03-2018 CKQ55_RS24345 e22fb0e34e079c7e3f00e8653749752c 399 SUPERFAMILY SSF53686 35 351 3.4E-61 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 SUPERFAMILY SSF53822 24 364 1.53E-92 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 2.5E-65 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 Pfam PF13458 Periplasmic binding protein 26 362 5.2E-63 T 29-03-2018 IPR028081 Leucine-binding protein domain CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 Gene3D G3DSA:3.40.50.2300 22 171 6.4E-38 T 29-03-2018 CKQ55_RS14805 429fb0364701ed9a65c2293fea41e526 369 Gene3D G3DSA:3.40.50.2300 172 350 3.8E-22 T 29-03-2018 CKQ55_RS10160 2b5520865306b29a77ae4ec1d8e3bbc7 383 Gene3D G3DSA:2.130.10.10 13 170 4.1E-15 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS10160 2b5520865306b29a77ae4ec1d8e3bbc7 383 Pfam PF10282 Lactonase, 7-bladed beta-propeller 26 378 2.8E-103 T 29-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CKQ55_RS10160 2b5520865306b29a77ae4ec1d8e3bbc7 383 Gene3D G3DSA:2.130.10.10 171 383 5.8E-29 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS10160 2b5520865306b29a77ae4ec1d8e3bbc7 383 SUPERFAMILY SSF51004 44 375 7.59E-40 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 SUPERFAMILY SSF51735 317 651 5.22E-72 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 SUPERFAMILY SSF53328 1 202 2.75E-55 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 6.4E-44 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 SUPERFAMILY SSF50486 204 304 1.49E-23 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 PIRSF PIRSF036506 1 660 0.0 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Gene3D G3DSA:3.40.50.720 314 658 5.2E-46 T 29-03-2018 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.527 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Gene3D G3DSA:3.10.25.10 203 305 8.8E-22 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 7.8E-18 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Pfam PF00551 Formyl transferase 27 177 4.1E-24 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS14580 3ab8e88b46bea8c9b75a9582b7268333 661 Gene3D G3DSA:3.40.50.170 1 202 3.6E-50 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS17640 ecf50f4edd40b44f6d586b0a033bfb75 141 SUPERFAMILY SSF52833 3 136 2.56E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS17640 ecf50f4edd40b44f6d586b0a033bfb75 141 Pfam PF03960 ArsC family 7 115 5.6E-19 T 29-03-2018 IPR006660 Arsenate reductase-like CKQ55_RS17640 ecf50f4edd40b44f6d586b0a033bfb75 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 1.8E-40 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CKQ55_RS17640 ecf50f4edd40b44f6d586b0a033bfb75 141 Gene3D G3DSA:3.40.30.10 1 141 1.2E-44 T 29-03-2018 CKQ55_RS28080 2e9aca55acde8e186776349b19ef75ee 388 TIGRFAM TIGR00843 benE: benzoate transporter 1 382 5.9E-161 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CKQ55_RS28080 2e9aca55acde8e186776349b19ef75ee 388 Pfam PF03594 Benzoate membrane transport protein 9 381 5.7E-142 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CKQ55_RS12860 9c426f52541e9f5c4874f7b728bbc4d4 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 4.4E-197 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CKQ55_RS12860 9c426f52541e9f5c4874f7b728bbc4d4 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.637 T 29-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CKQ55_RS12860 9c426f52541e9f5c4874f7b728bbc4d4 622 Pfam PF02705 K+ potassium transporter 14 544 2.9E-209 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CKQ55_RS15660 b5fe74019421f67298dd73be76609156 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.0E-41 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CKQ55_RS15660 b5fe74019421f67298dd73be76609156 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.1E-45 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CKQ55_RS15660 b5fe74019421f67298dd73be76609156 162 PIRSF PIRSF018472 2 162 7.4E-58 T 29-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 Pfam PF07687 Peptidase dimerisation domain 181 275 3.3E-15 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 PIRSF PIRSF005962 2 383 1.1E-129 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 SUPERFAMILY SSF55031 179 292 8.11E-30 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 368 2.8E-107 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 Pfam PF01546 Peptidase family M20/M25/M40 69 379 2.8E-34 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 SUPERFAMILY SSF53187 294 382 2.86E-89 T 29-03-2018 CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 SUPERFAMILY SSF53187 6 193 2.86E-89 T 29-03-2018 CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 Gene3D G3DSA:3.40.630.10 4 218 1.6E-51 T 29-03-2018 CKQ55_RS25155 d819cc6a06c949b1109b2b1fb7d953aa 383 Gene3D G3DSA:3.40.630.10 223 383 1.9E-24 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 96 253 2.5E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF55424 439 562 1.1E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 440 548 1.1E-29 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 TIGRFAM TIGR02053 MerA: mercury(II) reductase 99 564 1.1E-186 T 29-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 99 421 9.5E-64 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF55008 2 70 3.67E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 236 253 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 472 492 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 271 288 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 537 556 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 109 127 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 13 23 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 144 163 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 291 306 2.3E-92 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 PIRSF PIRSF000350 1 564 1.7E-266 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Pfam PF00403 Heavy-metal-associated domain 3 62 6.9E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 196 288 1.13E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 100 148 1.13E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 315 460 1.13E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 307 433 1.9E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.30.390.30 439 564 3.2E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.30.70.100 2 68 1.5E-18 T 29-03-2018 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 132 142 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CKQ55_RS02575 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 254 306 5.1E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS18655 e1ff1714a281346fd544376f52e7415d 184 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 26 174 6.8E-21 T 29-03-2018 IPR013382 CRISPR-associated protein Cse2 CKQ55_RS18655 e1ff1714a281346fd544376f52e7415d 184 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 12 176 3.4E-31 T 29-03-2018 IPR013382 CRISPR-associated protein Cse2 CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 4.0E-74 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 Gene3D G3DSA:2.10.260.10 81 128 1.8E-4 T 29-03-2018 CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 Gene3D G3DSA:2.10.260.10 3 38 0.41 T 29-03-2018 CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 SUPERFAMILY SSF89447 1 135 7.85E-45 T 29-03-2018 CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 57.629 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 137 1.0E-19 T 29-03-2018 IPR020603 MraZ domain CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 6.9E-23 T 29-03-2018 IPR020603 MraZ domain CKQ55_RS08180 c0cac5ced633009e1e95f812b14ff4e8 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 1.1E-64 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CKQ55_RS11325 b9164029b5f0ab5ef4637aae23ff517f 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 4.0E-73 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS11325 b9164029b5f0ab5ef4637aae23ff517f 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 3.0E-129 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 SUPERFAMILY SSF47413 1 59 3.59E-19 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 Pfam PF13377 Periplasmic binding protein-like domain 171 330 1.6E-32 T 29-03-2018 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 Gene3D G3DSA:1.10.260.40 2 55 2.8E-23 T 29-03-2018 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 Gene3D G3DSA:3.40.50.2300 56 177 1.4E-27 T 29-03-2018 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 SMART SM00354 1 71 3.1E-36 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.0E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 SUPERFAMILY SSF53822 60 334 2.51E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 Gene3D G3DSA:3.40.50.2300 178 300 2.3E-40 T 29-03-2018 CKQ55_RS19140 fe69b611619925c5ff37e31953621384 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CKQ55_RS10205 422c6eb0f7dfb3f5f362c54958e1c766 128 Gene3D G3DSA:1.20.120.10 24 128 3.6E-19 T 29-03-2018 CKQ55_RS10205 422c6eb0f7dfb3f5f362c54958e1c766 128 SUPERFAMILY SSF47175 23 128 6.94E-32 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CKQ55_RS10205 422c6eb0f7dfb3f5f362c54958e1c766 128 Pfam PF07361 Cytochrome b562 24 128 7.7E-33 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CKQ55_RS10205 422c6eb0f7dfb3f5f362c54958e1c766 128 PIRSF PIRSF000029 1 128 1.4E-54 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CKQ55_RS04115 e280d20e2107b8bdfa1a76642a98e3c3 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 5.2E-12 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS04115 e280d20e2107b8bdfa1a76642a98e3c3 213 Gene3D G3DSA:3.40.50.620 1 213 1.8E-54 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS04115 e280d20e2107b8bdfa1a76642a98e3c3 213 Pfam PF01467 Cytidylyltransferase-like 7 187 7.8E-37 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS04115 e280d20e2107b8bdfa1a76642a98e3c3 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 2.6E-58 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CKQ55_RS04115 e280d20e2107b8bdfa1a76642a98e3c3 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 29.898 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CKQ55_RS04115 e280d20e2107b8bdfa1a76642a98e3c3 213 SUPERFAMILY SSF52374 3 212 1.25E-56 T 29-03-2018 CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 Pfam PF00691 OmpA family 73 168 1.1E-21 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 Gene3D G3DSA:3.30.1330.60 45 174 8.4E-35 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 PRINTS PR01021 OMPA domain signature 104 119 6.5E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 PRINTS PR01021 OMPA domain signature 119 135 6.5E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 PRINTS PR01021 OMPA domain signature 74 96 6.5E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 SUPERFAMILY SSF103088 61 173 6.28E-35 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS03570 c8ec65ae4ddaf48670d5b1715ddd079a 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 72 174 4.5E-47 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 3.0E-162 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 PIRSF PIRSF000164 11 336 4.4E-97 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.12 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 Gene3D G3DSA:3.20.20.70 1 336 2.6E-78 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 SUPERFAMILY SSF51395 1 334 3.66E-105 T 29-03-2018 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 1.3E-91 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CKQ55_RS01970 c617ec8539925cd42baafcbee020c65c 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CKQ55_RS10620 d9ec1e45aeace71b0803c0b8990067db 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 114 4.0E-43 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CKQ55_RS10620 d9ec1e45aeace71b0803c0b8990067db 131 Gene3D G3DSA:1.20.1300.10 3 128 1.4E-57 T 29-03-2018 CKQ55_RS10620 d9ec1e45aeace71b0803c0b8990067db 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 29.772 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CKQ55_RS10620 d9ec1e45aeace71b0803c0b8990067db 131 Pfam PF02300 Fumarate reductase subunit C 3 128 2.2E-56 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CKQ55_RS10620 d9ec1e45aeace71b0803c0b8990067db 131 SUPERFAMILY SSF81343 2 131 4.45E-58 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS10620 d9ec1e45aeace71b0803c0b8990067db 131 PIRSF PIRSF000180 2 130 3.6E-60 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CKQ55_RS19670 0c230ade774a8032a7d4412dcd74b2b8 770 Gene3D G3DSA:3.40.1350.10 30 125 0.0013 T 29-03-2018 CKQ55_RS19670 0c230ade774a8032a7d4412dcd74b2b8 770 Gene3D G3DSA:3.40.50.300 162 339 8.6E-6 T 29-03-2018 CKQ55_RS19670 0c230ade774a8032a7d4412dcd74b2b8 770 Pfam PF05729 NACHT domain 184 352 1.9E-8 T 29-03-2018 CKQ55_RS19670 0c230ade774a8032a7d4412dcd74b2b8 770 SUPERFAMILY SSF52540 171 355 2.17E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24585 06f17ae59ad6fed8b5d46d4f6f6d7c35 302 SUPERFAMILY SSF52151 1 296 4.97E-57 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CKQ55_RS24585 06f17ae59ad6fed8b5d46d4f6f6d7c35 302 Gene3D G3DSA:3.40.1090.10 1 253 8.8E-39 T 29-03-2018 CKQ55_RS24585 06f17ae59ad6fed8b5d46d4f6f6d7c35 302 Pfam PF01734 Patatin-like phospholipase 8 167 4.4E-23 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CKQ55_RS08465 a7fcc77c8c0a69a285012ddc71c9d6d6 82 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 82 35.152 T 29-03-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS08465 a7fcc77c8c0a69a285012ddc71c9d6d6 82 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 4 80 4.4E-25 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS08465 a7fcc77c8c0a69a285012ddc71c9d6d6 82 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 78 3.2E-19 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 CKQ55_RS11620 556d2cb17436050b53fbf86d28b1a819 316 PIRSF PIRSF000545 1 316 8.5E-149 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CKQ55_RS11620 556d2cb17436050b53fbf86d28b1a819 316 SUPERFAMILY SSF52540 10 315 3.7E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11620 556d2cb17436050b53fbf86d28b1a819 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 190.379 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CKQ55_RS11620 556d2cb17436050b53fbf86d28b1a819 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 245 1.6E-13 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CKQ55_RS11620 556d2cb17436050b53fbf86d28b1a819 316 Gene3D G3DSA:3.40.50.300 9 316 6.3E-54 T 29-03-2018 CKQ55_RS11620 556d2cb17436050b53fbf86d28b1a819 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 4.6E-175 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SUPERFAMILY SSF47781 470 558 7.34E-28 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SUPERFAMILY SSF158832 2 322 4.05E-120 T 29-03-2018 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Gene3D G3DSA:1.10.150.310 499 630 1.3E-44 T 29-03-2018 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SUPERFAMILY SSF50249 638 722 4.15E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Pfam PF00575 S1 RNA binding domain 651 720 7.0E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SMART SM00732 327 424 9.0E-36 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SUPERFAMILY SSF53098 323 469 5.06E-48 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Gene3D G3DSA:2.40.50.140 652 757 3.4E-24 T 29-03-2018 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SUPERFAMILY SSF47781 560 632 4.45E-20 T 29-03-2018 IPR010994 RuvA domain 2-like CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Pfam PF16921 Tex protein YqgF-like domain 328 451 1.8E-49 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Gene3D G3DSA:1.10.3500.10 361 498 2.4E-38 T 29-03-2018 IPR023323 Tex-like domain CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Gene3D G3DSA:1.10.3500.10 103 360 3.3E-76 T 29-03-2018 IPR023323 Tex-like domain CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Pfam PF09371 Tex-like protein N-terminal domain 10 193 6.8E-70 T 29-03-2018 IPR018974 Tex-like protein, N-terminal CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 5.1E-28 T 29-03-2018 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 SMART SM00316 649 720 1.2E-24 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS14405 2841cff6c33ce83a6dfc985a8daa6880 776 Gene3D G3DSA:1.10.10.650 3 102 2.0E-33 T 29-03-2018 IPR023319 Tex-like protein, HTH domain CKQ55_RS29255 b314c965db56672993b122ee248f83e0 158 Gene3D G3DSA:3.20.20.30 1 150 2.1E-27 T 29-03-2018 CKQ55_RS29255 b314c965db56672993b122ee248f83e0 158 SUPERFAMILY SSF51679 2 132 2.36E-29 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS05420 647b648cb3473d3615ec1e56a3ebcb31 641 Gene3D G3DSA:1.20.5.1230 3 536 7.8E-4 T 29-03-2018 CKQ55_RS27800 eaec8d46be7ab9757da42a08273d32ab 523 Gene3D G3DSA:1.50.10.10 193 521 8.9E-43 T 29-03-2018 CKQ55_RS27800 eaec8d46be7ab9757da42a08273d32ab 523 SUPERFAMILY SSF48208 200 521 1.9E-35 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS27800 eaec8d46be7ab9757da42a08273d32ab 523 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 190 518 1.3E-23 T 29-03-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain CKQ55_RS27800 eaec8d46be7ab9757da42a08273d32ab 523 Gene3D G3DSA:2.60.120.260 15 178 8.9E-5 T 29-03-2018 IPR008979 Galactose-binding domain-like CKQ55_RS02020 fc266031065ffbabcc8ebc15c84e7280 215 Gene3D G3DSA:3.60.15.10 1 213 5.9E-46 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02020 fc266031065ffbabcc8ebc15c84e7280 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 5.4E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02020 fc266031065ffbabcc8ebc15c84e7280 215 SMART SM00849 12 192 3.9E-43 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS02020 fc266031065ffbabcc8ebc15c84e7280 215 SUPERFAMILY SSF56281 2 209 6.63E-61 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Gene3D G3DSA:3.40.50.300 90 290 2.2E-44 T 29-03-2018 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Gene3D G3DSA:3.40.50.300 291 551 2.4E-57 T 29-03-2018 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 SUPERFAMILY SSF52540 311 501 1.25E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Pfam PF00005 ABC transporter 336 469 3.9E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Pfam PF00005 ABC transporter 19 185 5.3E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 SMART SM00382 28 230 1.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 SMART SM00382 344 514 1.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 SUPERFAMILY SSF52540 9 239 6.04E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Gene3D G3DSA:3.40.50.300 6 80 2.2E-8 T 29-03-2018 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Gene3D G3DSA:1.20.58.410 552 631 1.1E-6 T 29-03-2018 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 3.8E-21 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CKQ55_RS01950 dabb9cfc9203ec71d5aacbe919c6fd76 635 Pfam PF12848 ABC transporter 224 294 3.1E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain CKQ55_RS15890 68068b448e9fc2b40dcb46f909579235 241 Pfam PF00912 Transglycosylase 61 226 3.0E-51 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS15890 68068b448e9fc2b40dcb46f909579235 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 12 230 2.7E-85 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CKQ55_RS15890 68068b448e9fc2b40dcb46f909579235 241 Gene3D G3DSA:1.10.3810.10 48 239 1.9E-57 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CKQ55_RS15890 68068b448e9fc2b40dcb46f909579235 241 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 7 232 43.17 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CKQ55_RS15890 68068b448e9fc2b40dcb46f909579235 241 SUPERFAMILY SSF53955 54 230 6.47E-62 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 SUPERFAMILY SSF56935 22 361 1.83E-82 T 29-03-2018 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 Pfam PF00267 Gram-negative porin 27 361 3.4E-152 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 Gene3D G3DSA:2.40.160.10 32 361 1.1E-53 T 29-03-2018 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 2.1E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 2.1E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 313 330 2.1E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 234 246 2.1E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 2.1E-19 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 2.3E-71 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 240 257 2.3E-71 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.3E-71 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.3E-71 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 269 288 2.3E-71 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 2.3E-71 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS26785 4beafc488171ca422d5b8cd874292586 361 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 313 329 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 Gene3D G3DSA:3.40.190.10 29 229 7.1E-27 T 29-03-2018 CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 Gene3D G3DSA:3.40.190.10 230 361 1.8E-9 T 29-03-2018 CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 Pfam PF13416 Bacterial extracellular solute-binding protein 45 347 1.8E-52 T 29-03-2018 CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 SUPERFAMILY SSF53850 25 399 1.4E-81 T 29-03-2018 CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 PRINTS PR00181 Maltose binding protein signature 361 380 2.6E-5 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 PRINTS PR00181 Maltose binding protein signature 68 86 2.6E-5 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS06040 8d2f5b6a92b81a2eeffe157ec35a5220 410 PRINTS PR00181 Maltose binding protein signature 128 147 2.6E-5 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS14915 5b40556c3b8030218cc37fe7f4dca57c 176 Gene3D G3DSA:3.40.50.300 7 176 2.5E-26 T 29-03-2018 CKQ55_RS14915 5b40556c3b8030218cc37fe7f4dca57c 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 172 1.9E-71 T 29-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CKQ55_RS14915 5b40556c3b8030218cc37fe7f4dca57c 176 Pfam PF01202 Shikimate kinase 17 170 8.9E-12 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS14915 5b40556c3b8030218cc37fe7f4dca57c 176 SUPERFAMILY SSF52540 4 172 1.69E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22560 4c053bc1104ccf305e221fdf45208527 193 Gene3D G3DSA:2.70.40.10 2 167 5.3E-44 T 29-03-2018 CKQ55_RS22560 4c053bc1104ccf305e221fdf45208527 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.797 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CKQ55_RS22560 4c053bc1104ccf305e221fdf45208527 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.0E-66 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CKQ55_RS22560 4c053bc1104ccf305e221fdf45208527 193 SUPERFAMILY SSF51283 1 193 1.57E-58 T 29-03-2018 IPR029054 dUTPase-like CKQ55_RS22560 4c053bc1104ccf305e221fdf45208527 193 Pfam PF00692 dUTPase 80 185 3.9E-8 T 29-03-2018 IPR029054 dUTPase-like CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 SUPERFAMILY SSF100950 77 233 1.99E-27 T 29-03-2018 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 Gene3D G3DSA:1.10.10.10 2 79 2.6E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 Pfam PF00455 DeoR C terminal sensor domain 76 231 5.7E-49 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 SMART SM01134 73 233 1.8E-67 T 29-03-2018 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 SMART SM00420 6 58 5.6E-19 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 SUPERFAMILY SSF46785 5 74 6.94E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 Gene3D G3DSA:3.40.50.1360 80 250 4.8E-34 T 29-03-2018 CKQ55_RS07960 690cd7bbb3ab98f9284dae127025076c 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 2.2E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16940 f91f78048ac9a436cd9ee59b124434c8 288 Gene3D G3DSA:3.40.30.10 45 144 1.4E-23 T 29-03-2018 CKQ55_RS16940 f91f78048ac9a436cd9ee59b124434c8 288 SUPERFAMILY SSF52833 38 130 9.26E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS16940 f91f78048ac9a436cd9ee59b124434c8 288 Gene3D G3DSA:1.20.1050.10 145 288 3.2E-28 T 29-03-2018 CKQ55_RS16940 f91f78048ac9a436cd9ee59b124434c8 288 SUPERFAMILY SSF47616 133 279 2.23E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS16940 f91f78048ac9a436cd9ee59b124434c8 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 1.3E-5 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS16940 f91f78048ac9a436cd9ee59b124434c8 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 244 6.8E-9 T 29-03-2018 CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 9.8E-22 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 SUPERFAMILY SSF56219 1 267 1.2E-87 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 7.6E-94 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 4.1E-109 T 29-03-2018 CKQ55_RS29725 99ad1dcc9c3796a2516a002d01273dfe 268 Gene3D G3DSA:3.60.10.10 1 268 1.5E-52 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS22820 3e05c6db92d585d4826444965138c04e 86 Pfam PF03206 Nitrogen fixation protein NifW 10 84 4.6E-11 T 29-03-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 CKQ55_RS07790 3bf64e6fadcb3c0d9ad49fb2b99d033d 397 Pfam PF12693 GspL periplasmic domain 243 393 4.4E-30 T 29-03-2018 IPR025691 GspL periplasmic domain CKQ55_RS07790 3bf64e6fadcb3c0d9ad49fb2b99d033d 397 PIRSF PIRSF015761 5 396 7.3E-39 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CKQ55_RS07790 3bf64e6fadcb3c0d9ad49fb2b99d033d 397 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 13 393 3.1E-72 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CKQ55_RS07790 3bf64e6fadcb3c0d9ad49fb2b99d033d 397 SUPERFAMILY SSF53067 11 148 3.56E-33 T 29-03-2018 CKQ55_RS07790 3bf64e6fadcb3c0d9ad49fb2b99d033d 397 SUPERFAMILY SSF53067 151 233 1.28E-18 T 29-03-2018 CKQ55_RS07790 3bf64e6fadcb3c0d9ad49fb2b99d033d 397 Pfam PF05134 Type II secretion system (T2SS), protein L 12 236 5.1E-51 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CKQ55_RS18285 ff1762c87963bdbcffae0b4dbe898c85 94 SMART SM00877 4 80 5.4E-36 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18285 ff1762c87963bdbcffae0b4dbe898c85 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS18285 ff1762c87963bdbcffae0b4dbe898c85 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 7.0E-20 T 29-03-2018 CKQ55_RS18285 ff1762c87963bdbcffae0b4dbe898c85 94 SUPERFAMILY SSF143414 4 90 5.62E-32 T 29-03-2018 CKQ55_RS18285 ff1762c87963bdbcffae0b4dbe898c85 94 Pfam PF00936 BMC domain 5 80 1.3E-28 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Gene3D G3DSA:3.90.740.10 214 500 1.2E-92 T 29-03-2018 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 SUPERFAMILY SSF52374 403 648 4.51E-136 T 29-03-2018 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 SUPERFAMILY SSF52374 3 202 4.51E-136 T 29-03-2018 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 SUPERFAMILY SSF50677 204 403 9.31E-55 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 SUPERFAMILY SSF47323 652 929 1.35E-77 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 3.3E-232 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 1.5E-8 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 5.4E-304 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Gene3D G3DSA:3.40.50.620 47 213 2.9E-37 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 1.8E-25 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Gene3D G3DSA:3.30.2320.20 801 896 2.3E-25 T 29-03-2018 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Gene3D G3DSA:1.10.730.10 578 794 1.1E-45 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 8.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 8.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 8.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 8.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 8.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.499 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CKQ55_RS08545 e9205db4992352230411e3375b2e68ea 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CKQ55_RS03205 fdea2cf71727b0761a7209a55f2e885b 443 PIRSF PIRSF002808 6 441 4.5E-48 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS03205 fdea2cf71727b0761a7209a55f2e885b 443 Pfam PF07690 Major Facilitator Superfamily 25 378 2.4E-54 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS03205 fdea2cf71727b0761a7209a55f2e885b 443 Gene3D G3DSA:1.20.1250.20 249 443 1.8E-33 T 29-03-2018 CKQ55_RS03205 fdea2cf71727b0761a7209a55f2e885b 443 Gene3D G3DSA:1.20.1250.20 10 213 5.4E-36 T 29-03-2018 CKQ55_RS03205 fdea2cf71727b0761a7209a55f2e885b 443 SUPERFAMILY SSF103473 12 439 2.09E-88 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 3.9E-37 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 SUPERFAMILY SSF51604 139 415 2.47E-81 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 SUPERFAMILY SSF54826 7 137 1.63E-29 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 1.3E-270 T 29-03-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 SMART SM00922 185 285 3.9E-16 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 Gene3D G3DSA:3.30.390.10 1 140 1.9E-28 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS18565 08c19b5f340e58e15e6f405a5fe04463 446 Gene3D G3DSA:3.20.20.120 141 413 1.2E-48 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS08940 0a579bb682ec82927b8f30e42473316a 343 Pfam PF01380 SIS domain 65 139 1.5E-11 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS08940 0a579bb682ec82927b8f30e42473316a 343 Gene3D G3DSA:3.40.50.10490 9 162 3.7E-27 T 29-03-2018 CKQ55_RS08940 0a579bb682ec82927b8f30e42473316a 343 SUPERFAMILY SSF53697 26 343 3.14E-49 T 29-03-2018 CKQ55_RS08940 0a579bb682ec82927b8f30e42473316a 343 PIRSF PIRSF009290 8 343 7.9E-93 T 29-03-2018 IPR024713 Fructosamine deglycase FrlB CKQ55_RS08940 0a579bb682ec82927b8f30e42473316a 343 Gene3D G3DSA:3.40.50.10490 171 331 2.2E-8 T 29-03-2018 CKQ55_RS22615 36d72714a0f504e64517a2a764e2eeac 305 SUPERFAMILY SSF53448 4 295 2.06E-37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22615 36d72714a0f504e64517a2a764e2eeac 305 Gene3D G3DSA:3.90.550.10 1 248 1.7E-31 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22615 36d72714a0f504e64517a2a764e2eeac 305 Pfam PF00535 Glycosyl transferase family 2 5 171 5.7E-16 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS23610 5351eee0fc2a854fc547975e6ddb144e 379 SUPERFAMILY SSF48208 22 376 4.42E-91 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS23610 5351eee0fc2a854fc547975e6ddb144e 379 Gene3D G3DSA:1.50.10.10 1 379 9.2E-81 T 29-03-2018 CKQ55_RS23610 5351eee0fc2a854fc547975e6ddb144e 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 5.7E-108 T 29-03-2018 IPR010905 Glycosyl hydrolase, family 88 CKQ55_RS25050 79725842a06cac2c273065fa474ce7dd 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 32 223 5.2E-44 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CKQ55_RS25050 79725842a06cac2c273065fa474ce7dd 245 SUPERFAMILY SSF64438 21 223 6.41E-49 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CKQ55_RS25050 79725842a06cac2c273065fa474ce7dd 245 Gene3D G3DSA:3.60.140.10 15 243 3.4E-57 T 29-03-2018 CKQ55_RS08385 088b02d00abb17844ef1c0dfef3c0fdf 282 SUPERFAMILY SSF56300 1 259 3.64E-57 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS08385 088b02d00abb17844ef1c0dfef3c0fdf 282 Gene3D G3DSA:3.60.21.10 1 280 1.7E-47 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS08385 088b02d00abb17844ef1c0dfef3c0fdf 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.85 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CKQ55_RS08385 088b02d00abb17844ef1c0dfef3c0fdf 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 3.4E-161 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CKQ55_RS08385 088b02d00abb17844ef1c0dfef3c0fdf 282 PIRSF PIRSF000903 1 274 2.1E-124 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CKQ55_RS08385 088b02d00abb17844ef1c0dfef3c0fdf 282 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 7.5E-15 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS26070 c616e8b6004631cf6e0dc889e1f067b4 266 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 10 266 5.1E-95 T 29-03-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 CKQ55_RS26070 c616e8b6004631cf6e0dc889e1f067b4 266 Gene3D G3DSA:3.90.226.10 11 264 4.7E-24 T 29-03-2018 CKQ55_RS26070 c616e8b6004631cf6e0dc889e1f067b4 266 SUPERFAMILY SSF52096 23 217 2.34E-19 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS26070 c616e8b6004631cf6e0dc889e1f067b4 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 266 1.3E-100 T 29-03-2018 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 377 6.3E-110 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 SUPERFAMILY SSF53187 300 392 3.05E-84 T 29-03-2018 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 SUPERFAMILY SSF53187 6 199 3.05E-84 T 29-03-2018 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 PIRSF PIRSF005962 1 393 1.3E-124 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 Pfam PF01546 Peptidase family M20/M25/M40 74 385 9.9E-33 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 SUPERFAMILY SSF55031 186 296 6.54E-28 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 Gene3D G3DSA:3.40.630.10 2 221 8.3E-49 T 29-03-2018 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 Gene3D G3DSA:3.40.630.10 222 394 1.0E-21 T 29-03-2018 CKQ55_RS20170 256c5a001bfbaa446e1fb14a589e4246 394 Pfam PF07687 Peptidase dimerisation domain 189 283 7.3E-9 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS03515 9ab0be8dbc8d44288ed49ca8cd263250 123 Pfam PF13985 YbgS-like protein 3 123 3.1E-47 T 29-03-2018 IPR020363 Uncharacterised protein family YbgS CKQ55_RS03515 9ab0be8dbc8d44288ed49ca8cd263250 123 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 45 123 7.0E-25 T 29-03-2018 IPR020363 Uncharacterised protein family YbgS CKQ55_RS16140 40132e1efcdc657cbfcf38a03fefb505 292 Pfam PF01136 Peptidase family U32 93 201 4.8E-11 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS10465 b3225dcd98aa4f3742fb68715c1d1fe0 95 SUPERFAMILY SSF159871 11 94 6.8E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS10465 b3225dcd98aa4f3742fb68715c1d1fe0 95 Pfam PF07338 Protein of unknown function (DUF1471) 39 94 6.6E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS10465 b3225dcd98aa4f3742fb68715c1d1fe0 95 Gene3D G3DSA:3.30.1660.10 24 94 7.5E-18 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS06315 acc775323a9a8617ec0f918869eef075 463 SUPERFAMILY SSF103473 10 398 1.31E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06315 acc775323a9a8617ec0f918869eef075 463 Pfam PF07690 Major Facilitator Superfamily 29 355 1.6E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS06315 acc775323a9a8617ec0f918869eef075 463 Gene3D G3DSA:1.20.1250.20 216 413 6.8E-16 T 29-03-2018 CKQ55_RS06315 acc775323a9a8617ec0f918869eef075 463 Gene3D G3DSA:1.20.1250.20 16 207 1.7E-33 T 29-03-2018 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 20 410 2.2E-144 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 Pfam PF07690 Major Facilitator Superfamily 19 375 5.9E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 SUPERFAMILY SSF103473 14 419 8.24E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 Gene3D G3DSA:1.20.1250.20 231 428 3.5E-21 T 29-03-2018 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 Gene3D G3DSA:1.20.1250.20 10 225 3.2E-27 T 29-03-2018 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS03940 1877695286e33794c63ec3101db650a1 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS22105 9ac7579ac9ed56bfd23e9ffd11a60b59 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 50 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS22105 9ac7579ac9ed56bfd23e9ffd11a60b59 318 SUPERFAMILY SSF53613 14 302 3.12E-50 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS22105 9ac7579ac9ed56bfd23e9ffd11a60b59 318 Pfam PF00294 pfkB family carbohydrate kinase 16 305 6.7E-46 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS22105 9ac7579ac9ed56bfd23e9ffd11a60b59 318 Gene3D G3DSA:3.40.1190.20 12 317 5.0E-42 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS12885 f79caaa36bcb7795fbda262e498489e1 146 SUPERFAMILY SSF52218 1 146 7.05E-37 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS12885 f79caaa36bcb7795fbda262e498489e1 146 Gene3D G3DSA:3.40.50.360 1 146 9.0E-28 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS12885 f79caaa36bcb7795fbda262e498489e1 146 Pfam PF00258 Flavodoxin 7 138 3.1E-22 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CKQ55_RS21605 5d4366b7a9b939a0dca0fff2c9f01dbb 197 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 12 189 1.3E-45 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CKQ55_RS21605 5d4366b7a9b939a0dca0fff2c9f01dbb 197 Pfam PF00293 NUDIX domain 48 167 5.5E-6 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS21605 5d4366b7a9b939a0dca0fff2c9f01dbb 197 SUPERFAMILY SSF55811 10 192 1.82E-45 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS21605 5d4366b7a9b939a0dca0fff2c9f01dbb 197 Gene3D G3DSA:3.90.79.10 5 195 7.0E-33 T 29-03-2018 CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 Gene3D G3DSA:3.40.190.10 176 267 3.6E-21 T 29-03-2018 CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 SUPERFAMILY SSF46785 4 111 1.56E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 Gene3D G3DSA:3.40.190.10 89 175 2.9E-13 T 29-03-2018 CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 Gene3D G3DSA:1.10.10.10 3 84 3.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 Pfam PF03466 LysR substrate binding domain 90 295 8.9E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS23330 03b48da5eb5eabd76376dcd70b175596 306 SUPERFAMILY SSF53850 90 301 3.8E-42 T 29-03-2018 CKQ55_RS01770 a6035cbc4e2ed25250a1309615c0fe50 252 Gene3D G3DSA:3.40.50.10490 1 241 9.6E-39 T 29-03-2018 CKQ55_RS01770 a6035cbc4e2ed25250a1309615c0fe50 252 Pfam PF13580 SIS domain 7 141 4.7E-37 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS01770 a6035cbc4e2ed25250a1309615c0fe50 252 SUPERFAMILY SSF53697 3 209 1.46E-24 T 29-03-2018 CKQ55_RS12040 7a42da23360d1957a351814fa70b97fa 242 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.0E-53 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CKQ55_RS12040 7a42da23360d1957a351814fa70b97fa 242 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 230 1.7E-59 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CKQ55_RS17485 142588be1748494f4ad9c2132ab70260 238 Pfam PF04474 Protein of unknown function (DUF554) 3 230 5.7E-66 T 29-03-2018 IPR007563 Protein of unknown function DUF554 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 194 210 5.0E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Gene3D G3DSA:3.90.79.10 233 350 1.2E-9 T 29-03-2018 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 279 1.0E-130 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 SUPERFAMILY SSF55811 222 346 2.43E-25 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 SMART SM00478 41 192 2.8E-55 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Gene3D G3DSA:1.10.340.30 23 119 5.6E-33 T 29-03-2018 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Pfam PF14815 NUDIX domain 236 345 1.9E-24 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 170 3.5E-23 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Gene3D G3DSA:1.10.1670.10 120 227 1.1E-35 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 SUPERFAMILY SSF48150 7 227 2.2E-79 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 Pfam PF00633 Helix-hairpin-helix motif 102 129 3.0E-8 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CKQ55_RS17080 588ec17d4f886de99385bd79ed2ac153 352 SMART SM00525 193 213 3.9E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CKQ55_RS19925 e53ed69c5b8ec01cad76165cc4110f18 216 PIRSF PIRSF016938 1 205 4.4E-35 T 29-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 CKQ55_RS19925 e53ed69c5b8ec01cad76165cc4110f18 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 7.0E-26 T 29-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CKQ55_RS19925 e53ed69c5b8ec01cad76165cc4110f18 216 SUPERFAMILY SSF89069 1 66 2.35E-21 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CKQ55_RS19925 e53ed69c5b8ec01cad76165cc4110f18 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 86 2.2E-36 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CKQ55_RS25885 8bdc7fcafbe605cce134aac07fc67f1f 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 21 111 2.0E-36 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC CKQ55_RS25885 8bdc7fcafbe605cce134aac07fc67f1f 111 Pfam PF06942 GlpM protein 5 111 1.3E-51 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 Pfam PF12833 Helix-turn-helix domain 187 264 7.7E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 Gene3D G3DSA:2.60.120.280 8 157 1.6E-8 T 29-03-2018 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 SUPERFAMILY SSF46689 166 215 1.88E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 Pfam PF02311 AraC-like ligand binding domain 26 144 5.9E-18 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 Gene3D G3DSA:1.10.10.60 220 266 5.1E-12 T 29-03-2018 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 Gene3D G3DSA:1.10.10.60 161 219 1.2E-12 T 29-03-2018 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 SUPERFAMILY SSF46689 218 264 2.15E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 SMART SM00342 181 263 2.4E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS27550 7fb620fa570d2e2fc63ff6049e19705b 266 SUPERFAMILY SSF51215 26 147 1.83E-16 T 29-03-2018 CKQ55_RS04465 e5b092871f38e0a587073faf4841b20b 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04465 e5b092871f38e0a587073faf4841b20b 264 SMART SM00382 32 229 3.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04465 e5b092871f38e0a587073faf4841b20b 264 Pfam PF00005 ABC transporter 25 171 1.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04465 e5b092871f38e0a587073faf4841b20b 264 SUPERFAMILY SSF52540 8 234 7.87E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04465 e5b092871f38e0a587073faf4841b20b 264 Gene3D G3DSA:3.40.50.300 5 244 6.1E-58 T 29-03-2018 CKQ55_RS01240 89598adca82ce222e60426e5b8d9670c 300 SUPERFAMILY SSF55073 153 298 2.12E-35 T 29-03-2018 IPR029787 Nucleotide cyclase CKQ55_RS01240 89598adca82ce222e60426e5b8d9670c 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 298 2.6E-34 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS01240 89598adca82ce222e60426e5b8d9670c 300 Gene3D G3DSA:3.30.70.270 131 300 3.7E-40 T 29-03-2018 CKQ55_RS01240 89598adca82ce222e60426e5b8d9670c 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 150 294 2.9E-36 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS01240 89598adca82ce222e60426e5b8d9670c 300 SMART SM00267 133 299 5.5E-43 T 29-03-2018 IPR000160 GGDEF domain CKQ55_RS02685 98cfeeb2df4976cc29329d488f174381 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 2.1E-24 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CKQ55_RS02685 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.443.10 112 318 2.9E-46 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS02685 98cfeeb2df4976cc29329d488f174381 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS02685 98cfeeb2df4976cc29329d488f174381 337 SUPERFAMILY SSF56349 16 316 1.41E-50 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS02685 98cfeeb2df4976cc29329d488f174381 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 1.8E-153 T 29-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CKQ55_RS02685 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.150.130 13 97 4.1E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS03280 62f88760468dfe8be9e64f2948360f4b 162 Pfam PF01967 MoaC family 15 150 1.2E-54 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03280 62f88760468dfe8be9e64f2948360f4b 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.0E-72 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03280 62f88760468dfe8be9e64f2948360f4b 162 Gene3D G3DSA:3.30.70.640 2 158 3.3E-68 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03280 62f88760468dfe8be9e64f2948360f4b 162 SUPERFAMILY SSF55040 11 155 1.44E-61 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03280 62f88760468dfe8be9e64f2948360f4b 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.62 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CKQ55_RS06685 67fd8c653e04f346d9e56506393d7c4e 513 SMART SM00387 419 508 2.7E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06685 67fd8c653e04f346d9e56506393d7c4e 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 506 3.1E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06685 67fd8c653e04f346d9e56506393d7c4e 513 Pfam PF07730 Histidine kinase 316 380 1.9E-14 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CKQ55_RS06685 67fd8c653e04f346d9e56506393d7c4e 513 SUPERFAMILY SSF55874 395 505 6.9E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS06685 67fd8c653e04f346d9e56506393d7c4e 513 Pfam PF05231 MASE1 11 281 1.3E-43 T 29-03-2018 IPR007895 MASE1 CKQ55_RS06685 67fd8c653e04f346d9e56506393d7c4e 513 Gene3D G3DSA:3.30.565.10 340 507 5.3E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS00805 9f53a42cade6a0b150087a5f48cce64e 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 30.763 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS00805 9f53a42cade6a0b150087a5f48cce64e 194 Pfam PF02545 Maf-like protein 4 186 7.7E-49 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS00805 9f53a42cade6a0b150087a5f48cce64e 194 PIRSF PIRSF006305 1 193 1.5E-45 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS00805 9f53a42cade6a0b150087a5f48cce64e 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 1.4E-67 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CKQ55_RS00805 9f53a42cade6a0b150087a5f48cce64e 194 SUPERFAMILY SSF52972 3 185 7.85E-62 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS00805 9f53a42cade6a0b150087a5f48cce64e 194 Gene3D G3DSA:3.90.950.10 2 194 3.1E-61 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CKQ55_RS11990 2c351d09be44aed21fcf123810ad1522 364 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 5.8E-165 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CKQ55_RS11990 2c351d09be44aed21fcf123810ad1522 364 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.125 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CKQ55_RS11990 2c351d09be44aed21fcf123810ad1522 364 Pfam PF00953 Glycosyl transferase family 4 76 232 8.7E-30 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CKQ55_RS13015 9b16c93caef85e63d8970505a2e8c86b 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 6.1E-38 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CKQ55_RS13015 9b16c93caef85e63d8970505a2e8c86b 188 SUPERFAMILY SSF52218 6 179 7.9E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS13015 9b16c93caef85e63d8970505a2e8c86b 188 Gene3D G3DSA:3.40.50.360 1 188 1.6E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS29765 9e9f9d61102c124e19b4ddd7d665c388 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 5.6E-9 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CKQ55_RS29765 9e9f9d61102c124e19b4ddd7d665c388 205 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CKQ55_RS02995 f9f60c3d229fdeb6da92bbb539a11183 512 PIRSF PIRSF002741 12 511 1.1E-109 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS02995 f9f60c3d229fdeb6da92bbb539a11183 512 SUPERFAMILY SSF53850 30 510 4.44E-144 T 29-03-2018 CKQ55_RS02995 f9f60c3d229fdeb6da92bbb539a11183 512 Gene3D G3DSA:3.90.76.10 37 181 3.9E-41 T 29-03-2018 CKQ55_RS02995 f9f60c3d229fdeb6da92bbb539a11183 512 Gene3D G3DSA:3.40.190.10 182 274 4.8E-27 T 29-03-2018 CKQ55_RS02995 f9f60c3d229fdeb6da92bbb539a11183 512 Gene3D G3DSA:3.10.105.10 275 486 2.5E-58 T 29-03-2018 CKQ55_RS02995 f9f60c3d229fdeb6da92bbb539a11183 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 7.3E-99 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS00640 77fd72e5bf7489e9a1a906942560d15a 414 Pfam PF02687 FtsX-like permease family 302 407 6.1E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CKQ55_RS00640 77fd72e5bf7489e9a1a906942560d15a 414 Pfam PF12704 MacB-like periplasmic core domain 27 238 2.5E-15 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CKQ55_RS00640 77fd72e5bf7489e9a1a906942560d15a 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 7.9E-162 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CKQ55_RS00640 77fd72e5bf7489e9a1a906942560d15a 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 5.9E-222 T 29-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 CKQ55_RS00640 77fd72e5bf7489e9a1a906942560d15a 414 Gene3D G3DSA:1.20.1250.20 1 406 0.0055 T 29-03-2018 CKQ55_RS23790 b62cb3fd0a6a53a0288c9f31ef85a52e 124 Gene3D G3DSA:2.60.40.1220 26 124 3.6E-30 T 29-03-2018 CKQ55_RS23790 b62cb3fd0a6a53a0288c9f31ef85a52e 124 Pfam PF04234 CopC domain 27 123 3.8E-26 T 29-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CKQ55_RS23790 b62cb3fd0a6a53a0288c9f31ef85a52e 124 SUPERFAMILY SSF81296 26 124 7.7E-28 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS18255 0a76583d9cf63961d5d477d69972acf6 224 Pfam PF02288 Dehydratase medium subunit 69 181 1.4E-34 T 29-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CKQ55_RS18255 0a76583d9cf63961d5d477d69972acf6 224 SUPERFAMILY SSF52968 47 224 4.19E-72 T 29-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CKQ55_RS18255 0a76583d9cf63961d5d477d69972acf6 224 Gene3D G3DSA:3.40.50.10150 50 221 5.3E-77 T 29-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CKQ55_RS18255 0a76583d9cf63961d5d477d69972acf6 224 PIRSF PIRSF018506 1 224 3.3E-113 T 29-03-2018 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CKQ55_RS27790 9ef48e5fd0371205dcf99ec5fe29042c 193 Gene3D G3DSA:2.30.110.10 7 193 7.2E-37 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS27790 9ef48e5fd0371205dcf99ec5fe29042c 193 SMART SM00903 14 158 3.8E-19 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS27790 9ef48e5fd0371205dcf99ec5fe29042c 193 Pfam PF01613 Flavin reductase like domain 19 154 1.0E-13 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS27790 9ef48e5fd0371205dcf99ec5fe29042c 193 SUPERFAMILY SSF50475 4 186 3.29E-37 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS18415 20badb5c9da4a2dbdb210749b4e11b74 269 SUPERFAMILY SSF69572 10 262 1.57E-62 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS18415 20badb5c9da4a2dbdb210749b4e11b74 269 Gene3D G3DSA:3.40.50.720 3 268 5.5E-53 T 29-03-2018 CKQ55_RS18415 20badb5c9da4a2dbdb210749b4e11b74 269 Pfam PF00899 ThiF family 20 260 9.9E-36 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS25725 b6a61ff44bc39754f03ee8a750e638a2 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 25.7 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CKQ55_RS25725 b6a61ff44bc39754f03ee8a750e638a2 206 PIRSF PIRSF006091 1 202 1.0E-68 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CKQ55_RS25725 b6a61ff44bc39754f03ee8a750e638a2 206 SMART SM00900 99 191 8.5E-36 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CKQ55_RS25725 b6a61ff44bc39754f03ee8a750e638a2 206 Pfam PF04205 FMN-binding domain 99 187 3.1E-19 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CKQ55_RS25725 b6a61ff44bc39754f03ee8a750e638a2 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 1.2E-66 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CKQ55_RS22965 663bc9121751c134a65e3768640e1618 313 SUPERFAMILY SSF51658 1 309 2.07E-43 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS22965 663bc9121751c134a65e3768640e1618 313 Pfam PF07582 AP endonuclease family 2 C terminus 269 308 1.6E-10 T 29-03-2018 IPR011418 AP endonuclease, family 2, C-terminal CKQ55_RS22965 663bc9121751c134a65e3768640e1618 313 Gene3D G3DSA:3.20.20.150 1 313 2.0E-52 T 29-03-2018 CKQ55_RS22965 663bc9121751c134a65e3768640e1618 313 Pfam PF01261 Xylose isomerase-like TIM barrel 19 263 2.3E-29 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 SUPERFAMILY SSF53067 251 481 1.69E-46 T 29-03-2018 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 SUPERFAMILY SSF53067 1 249 2.85E-56 T 29-03-2018 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 2.8E-53 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 PIRSF PIRSF000538 1 484 3.3E-100 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 Gene3D G3DSA:3.30.420.40 247 494 5.9E-51 T 29-03-2018 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 439 5.4E-27 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 376 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS04305 945dde997cec3f2745f2b36746fe5c09 498 Gene3D G3DSA:3.30.420.40 1 246 3.4E-59 T 29-03-2018 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 Gene3D G3DSA:3.40.190.10 140 396 9.8E-41 T 29-03-2018 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 SUPERFAMILY SSF53850 29 395 8.4E-96 T 29-03-2018 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 357 376 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 130 149 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 233 252 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 70 88 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 151 170 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 299 320 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 171 190 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 PRINTS PR00181 Maltose binding protein signature 36 54 1.3E-99 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 341 6.1E-41 T 29-03-2018 CKQ55_RS11200 e602941fcde7740292596ac8f2a6f94b 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 3.6E-6 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 3.6E-6 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 3.6E-6 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 SUPERFAMILY SSF51569 4 303 4.61E-65 T 29-03-2018 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 Pfam PF00701 Dihydrodipicolinate synthetase family 5 301 1.4E-38 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 Gene3D G3DSA:3.20.20.70 2 307 2.4E-67 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 SMART SM01130 4 303 3.3E-64 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS07070 a2f58c0cce5dc3a489837995d31966ea 308 PIRSF PIRSF001365 2 307 2.7E-64 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS10505 44fe70451f96f3d62e3ca9f92e336204 334 PIRSF PIRSF005651 1 334 9.1E-109 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CKQ55_RS10505 44fe70451f96f3d62e3ca9f92e336204 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 2.7E-146 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CKQ55_RS10505 44fe70451f96f3d62e3ca9f92e336204 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 4.5E-34 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS10505 44fe70451f96f3d62e3ca9f92e336204 334 SMART SM00244 18 227 3.5E-45 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS10505 44fe70451f96f3d62e3ca9f92e336204 334 SUPERFAMILY SSF117892 56 157 1.14E-16 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS10505 44fe70451f96f3d62e3ca9f92e336204 334 SUPERFAMILY SSF117892 189 233 6.02E-8 T 29-03-2018 IPR001107 Band 7 domain CKQ55_RS19545 b0497ac5d182842195ff1b56d9938141 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 5.0E-79 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CKQ55_RS19545 b0497ac5d182842195ff1b56d9938141 185 Gene3D G3DSA:3.40.30.10 23 177 4.2E-25 T 29-03-2018 CKQ55_RS19545 b0497ac5d182842195ff1b56d9938141 185 Pfam PF08534 Redoxin 42 164 1.7E-21 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CKQ55_RS19545 b0497ac5d182842195ff1b56d9938141 185 SUPERFAMILY SSF52833 50 178 1.96E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS19545 b0497ac5d182842195ff1b56d9938141 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 SUPERFAMILY SSF55811 5 158 3.52E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.091 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 Gene3D G3DSA:3.90.79.10 1 164 8.8E-35 T 29-03-2018 CKQ55_RS18090 ff2844356130ee86ca947d18565de683 176 Pfam PF00293 NUDIX domain 7 146 5.2E-27 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 SUPERFAMILY SSF47203 283 443 5.8E-40 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 Gene3D G3DSA:1.20.140.10 275 449 6.0E-35 T 29-03-2018 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 273 2.9E-15 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 1.5E-28 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 Gene3D G3DSA:2.40.110.10 180 274 1.9E-19 T 29-03-2018 CKQ55_RS10470 4696908617c36c475d151fabe353aebc 545 SUPERFAMILY SSF56645 85 292 1.32E-31 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CKQ55_RS06675 578d6deec36a48eb26af0dfae146f9e2 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 247 1.4E-25 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CKQ55_RS06675 578d6deec36a48eb26af0dfae146f9e2 320 Gene3D G3DSA:3.40.190.10 20 120 9.0E-11 T 29-03-2018 CKQ55_RS06675 578d6deec36a48eb26af0dfae146f9e2 320 SUPERFAMILY SSF53850 34 305 8.89E-47 T 29-03-2018 CKQ55_RS06675 578d6deec36a48eb26af0dfae146f9e2 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 5.4E-152 T 29-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 CKQ55_RS06675 578d6deec36a48eb26af0dfae146f9e2 320 Gene3D G3DSA:3.40.190.10 121 320 3.2E-39 T 29-03-2018 CKQ55_RS06675 578d6deec36a48eb26af0dfae146f9e2 320 SMART SM00062 24 239 6.5E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS15005 fd515ebc2a21912512e04c0a13b7ee91 133 PIRSF PIRSF016821 6 133 1.0E-39 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CKQ55_RS15005 fd515ebc2a21912512e04c0a13b7ee91 133 SMART SM00363 9 72 2.0E-7 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS15005 fd515ebc2a21912512e04c0a13b7ee91 133 Pfam PF01479 S4 domain 9 53 7.7E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS15005 fd515ebc2a21912512e04c0a13b7ee91 133 Gene3D G3DSA:3.10.290.10 2 105 2.5E-25 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS15005 fd515ebc2a21912512e04c0a13b7ee91 133 SUPERFAMILY SSF55174 9 103 2.49E-28 T 29-03-2018 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.0E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 PIRSF PIRSF039144 1 112 1.2E-57 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 2 17 2.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 23 41 2.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 83 103 2.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 52 75 2.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 Gene3D G3DSA:3.30.70.120 1 108 2.7E-49 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 SMART SM00938 4 105 2.0E-67 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CKQ55_RS20035 7126751321fe4ed152141a8e8c3b96ef 112 SUPERFAMILY SSF54913 1 112 2.22E-46 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 4.0E-19 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 Pfam PF00384 Molybdopterin oxidoreductase 107 154 1.7E-6 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 Gene3D G3DSA:2.20.25.90 37 108 7.6E-21 T 29-03-2018 CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 SUPERFAMILY SSF53706 35 195 8.77E-58 T 29-03-2018 CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 Gene3D G3DSA:3.40.50.740 109 195 1.5E-13 T 29-03-2018 CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 SMART SM00926 43 104 4.9E-22 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS12660 3095ca343ab9aefc60fcd60fd9239b22 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CKQ55_RS28090 89d40b7d5de3cb2091350d1ad37a456f 305 Pfam PF00892 EamA-like transporter family 8 134 6.4E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS28090 89d40b7d5de3cb2091350d1ad37a456f 305 Pfam PF00892 EamA-like transporter family 150 285 2.3E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS28090 89d40b7d5de3cb2091350d1ad37a456f 305 SUPERFAMILY SSF103481 35 137 3.27E-14 T 29-03-2018 CKQ55_RS28090 89d40b7d5de3cb2091350d1ad37a456f 305 SUPERFAMILY SSF103481 191 287 1.31E-9 T 29-03-2018 CKQ55_RS11250 8b64854cf631ff09d8300f5af71896ec 151 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 99 132 4.2E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS11250 8b64854cf631ff09d8300f5af71896ec 151 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 65 74 0.17 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS11250 8b64854cf631ff09d8300f5af71896ec 151 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 61 1.5E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS11250 8b64854cf631ff09d8300f5af71896ec 151 Gene3D G3DSA:2.160.10.10 3 150 4.5E-38 T 29-03-2018 CKQ55_RS11250 8b64854cf631ff09d8300f5af71896ec 151 SUPERFAMILY SSF51161 11 150 2.62E-36 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS10965 03eb728e0fd144eb72bf46d152b7d50e 187 Pfam PF00419 Fimbrial protein 42 187 1.6E-10 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10965 03eb728e0fd144eb72bf46d152b7d50e 187 SUPERFAMILY SSF49401 41 187 3.08E-22 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS10965 03eb728e0fd144eb72bf46d152b7d50e 187 Gene3D G3DSA:2.60.40.1090 39 187 2.0E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS20315 9003619fc673f6ee1d9da2d68f525630 452 SUPERFAMILY SSF51126 12 326 6.29E-61 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS20315 9003619fc673f6ee1d9da2d68f525630 452 Gene3D G3DSA:2.160.20.10 12 360 4.0E-70 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS20315 9003619fc673f6ee1d9da2d68f525630 452 Pfam PF00295 Glycosyl hydrolases family 28 84 268 1.6E-21 T 29-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CKQ55_RS14355 c478577796453d21253e5c03eafdb971 182 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 7.5E-24 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS14355 c478577796453d21253e5c03eafdb971 182 SUPERFAMILY SSF55729 1 171 1.06E-42 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS14355 c478577796453d21253e5c03eafdb971 182 Gene3D G3DSA:3.40.630.30 1 177 2.9E-33 T 29-03-2018 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Hamap MF_00195 GTPase Der [der]. 2 463 39.367 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 SUPERFAMILY SSF52540 4 162 2.31E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 460 5.3E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.1E-21 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 204 370 2.4E-22 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 SUPERFAMILY SSF52540 137 167 1.75E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 SUPERFAMILY SSF52540 202 466 1.75E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Pfam PF01926 50S ribosome-binding GTPase 207 324 2.0E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Pfam PF01926 50S ribosome-binding GTPase 5 119 3.6E-28 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Gene3D G3DSA:1.20.120.430 2 66 4.4E-15 T 29-03-2018 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Gene3D G3DSA:1.20.120.430 271 382 1.4E-15 T 29-03-2018 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.2E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.2E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Gene3D G3DSA:1.20.120.430 67 270 7.0E-48 T 29-03-2018 CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 380 460 1.2E-25 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 Gene3D G3DSA:3.30.300.20 383 461 2.2E-27 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS20225 f86167886da9c58ca674ac67d59f330b 492 PIRSF PIRSF006485 1 468 2.4E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 536 6.2E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 Pfam PF17203 Single cache domain 3 45 172 1.4E-20 T 29-03-2018 IPR033463 Single cache domain 3 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 Gene3D G3DSA:3.30.450.20 37 171 2.3E-23 T 29-03-2018 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 SUPERFAMILY SSF55785 224 283 4.95E-6 T 29-03-2018 IPR000014 PAS domain CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 SUPERFAMILY SSF103190 45 172 4.71E-36 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 SUPERFAMILY SSF55890 330 382 1.96E-6 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 Gene3D G3DSA:3.30.565.10 398 542 3.2E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 Gene3D G3DSA:3.30.450.20 205 300 7.0E-7 T 29-03-2018 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 SMART SM00387 426 537 4.7E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 Gene3D G3DSA:1.10.287.130 320 384 4.8E-13 T 29-03-2018 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 SUPERFAMILY SSF55874 386 538 3.8E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 SMART SM00091 220 290 0.0014 T 29-03-2018 IPR000014 PAS domain CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.4E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 495 1.4E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.4E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS08480 f00cb240de64e1641b8cacdf8dfcffe7 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.4E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 Gene3D G3DSA:1.10.10.60 2 60 1.4E-10 T 29-03-2018 CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 SUPERFAMILY SSF48498 84 193 1.98E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 Gene3D G3DSA:1.10.357.10 61 193 1.9E-17 T 29-03-2018 CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 5.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 SUPERFAMILY SSF46689 5 84 5.49E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13690 c0bf9c85e8723810d1af8a43075b847f 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.983 T 29-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CKQ55_RS03170 32c4ebbbbfe9d6af9ae9fd3b5a52286a 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 8.0E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS03170 32c4ebbbbfe9d6af9ae9fd3b5a52286a 86 Gene3D G3DSA:3.30.1660.10 22 86 3.9E-22 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS03170 32c4ebbbbfe9d6af9ae9fd3b5a52286a 86 SUPERFAMILY SSF159871 3 86 3.53E-25 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS29595 5501f523d747935d8c6f550a58168e39 132 Pfam PF03061 Thioesterase superfamily 26 97 4.8E-19 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CKQ55_RS29595 5501f523d747935d8c6f550a58168e39 132 SUPERFAMILY SSF54637 8 130 2.93E-39 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS29595 5501f523d747935d8c6f550a58168e39 132 Gene3D G3DSA:3.10.129.10 2 132 1.9E-34 T 29-03-2018 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 SUPERFAMILY SSF53850 68 296 7.24E-37 T 29-03-2018 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 Gene3D G3DSA:3.40.190.10 195 304 4.9E-5 T 29-03-2018 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 Pfam PF01464 Transglycosylase SLT domain 324 430 3.2E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 32 499 46.775 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 337 365 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 SMART SM00062 71 296 3.1E-47 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 78 295 5.5E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 SUPERFAMILY SSF53955 273 425 1.56E-34 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 Gene3D G3DSA:1.10.530.10 305 478 2.4E-35 T 29-03-2018 CKQ55_RS20005 4a3b71b65e9424435405c0799b33e36c 538 Gene3D G3DSA:3.40.190.10 57 194 3.9E-19 T 29-03-2018 CKQ55_RS23765 a9abc5ef86efc056974996cf8deda81c 119 Gene3D G3DSA:1.10.10.710 22 83 9.7E-25 T 29-03-2018 CKQ55_RS23765 a9abc5ef86efc056974996cf8deda81c 119 Pfam PF07130 YebG protein 1 73 3.0E-32 T 29-03-2018 IPR009813 Uncharacterised protein family YebG CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Gene3D G3DSA:1.10.3170.10 155 349 3.4E-58 T 29-03-2018 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 SUPERFAMILY SSF52980 899 1174 5.9E-94 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1173 23.309 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 436 2.0E-60 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 551 809 1.6E-17 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 SUPERFAMILY SSF52540 16 80 3.91E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 SUPERFAMILY SSF52540 118 202 3.91E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 SUPERFAMILY SSF52540 325 822 3.91E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Gene3D G3DSA:3.40.50.300 604 885 9.4E-29 T 29-03-2018 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Gene3D G3DSA:3.40.50.300 444 603 1.5E-19 T 29-03-2018 CKQ55_RS18145 1ed0eba0ebdf0c8f21f2b5cdab7855ce 1181 Gene3D G3DSA:3.90.320.10 889 1180 7.2E-88 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CKQ55_RS00125 c918093c22a2ecfbdd174a371e461611 60 Gene3D G3DSA:3.40.718.10 5 60 1.6E-10 T 29-03-2018 CKQ55_RS00125 c918093c22a2ecfbdd174a371e461611 60 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 56 7.6E-10 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS00125 c918093c22a2ecfbdd174a371e461611 60 SUPERFAMILY SSF53659 6 60 1.35E-12 T 29-03-2018 CKQ55_RS19550 c6e5b249535ca7bb6fcad97564f74f4c 352 Gene3D G3DSA:1.25.40.10 26 332 3.0E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS19550 c6e5b249535ca7bb6fcad97564f74f4c 352 SUPERFAMILY SSF48452 223 323 4.7E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS19550 c6e5b249535ca7bb6fcad97564f74f4c 352 Pfam PF03918 Cytochrome C biogenesis protein 8 132 2.5E-47 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CKQ55_RS22025 33d6d1595f9335b235562080d46680f3 204 SUPERFAMILY SSF56349 6 191 5.89E-22 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS22025 33d6d1595f9335b235562080d46680f3 204 Pfam PF00589 Phage integrase family 30 189 2.0E-6 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS22025 33d6d1595f9335b235562080d46680f3 204 Gene3D G3DSA:1.10.443.10 8 193 1.8E-19 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS28320 0434fb73892b5b8be48d7c86bc79a481 255 SUPERFAMILY SSF52096 4 255 5.35E-81 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS28320 0434fb73892b5b8be48d7c86bc79a481 255 Gene3D G3DSA:3.90.226.10 3 212 9.8E-70 T 29-03-2018 CKQ55_RS28320 0434fb73892b5b8be48d7c86bc79a481 255 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CKQ55_RS28320 0434fb73892b5b8be48d7c86bc79a481 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 254 3.5E-71 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CKQ55_RS28320 0434fb73892b5b8be48d7c86bc79a481 255 Gene3D G3DSA:1.10.12.10 213 255 4.9E-19 T 29-03-2018 IPR014748 Crontonase, C-terminal CKQ55_RS00700 e290fa87a39b402af62b5eefe33cb8c7 340 SUPERFAMILY SSF51445 3 319 8.84E-86 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS00700 e290fa87a39b402af62b5eefe33cb8c7 340 Gene3D G3DSA:3.20.20.300 1 339 1.9E-78 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS00700 e290fa87a39b402af62b5eefe33cb8c7 340 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CKQ55_RS00700 e290fa87a39b402af62b5eefe33cb8c7 340 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 318 1.6E-95 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CKQ55_RS00700 e290fa87a39b402af62b5eefe33cb8c7 340 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.231 T 29-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 Pfam PF00271 Helicase conserved C-terminal domain 228 336 7.7E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 SMART SM00487 22 219 8.7E-57 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 SMART SM00490 255 336 4.1E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 3.2E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 Pfam PF03880 DbpA RNA binding domain 384 454 4.1E-20 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 Gene3D G3DSA:3.40.50.300 9 219 8.0E-57 T 29-03-2018 CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 69.494 T 29-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 SUPERFAMILY SSF52540 73 350 1.27E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28690 fd87f64a38bb5b6b3392462012584bc0 457 Gene3D G3DSA:3.40.50.300 220 450 1.7E-42 T 29-03-2018 CKQ55_RS09330 8a6b766d41ee92c75ec573b6d7533e57 92 SMART SM00877 3 79 1.2E-35 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09330 8a6b766d41ee92c75ec573b6d7533e57 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS09330 8a6b766d41ee92c75ec573b6d7533e57 92 Pfam PF00936 BMC domain 4 79 6.3E-29 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09330 8a6b766d41ee92c75ec573b6d7533e57 92 SUPERFAMILY SSF143414 3 87 4.84E-31 T 29-03-2018 CKQ55_RS09330 8a6b766d41ee92c75ec573b6d7533e57 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 49 6.0E-20 T 29-03-2018 CKQ55_RS31375 563ee6d962d72fc6eb5650e37ccfaefa 192 Gene3D G3DSA:3.30.420.10 27 190 1.6E-22 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS31375 563ee6d962d72fc6eb5650e37ccfaefa 192 Pfam PF00665 Integrase core domain 40 177 1.8E-12 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CKQ55_RS31375 563ee6d962d72fc6eb5650e37ccfaefa 192 SUPERFAMILY SSF53098 33 183 6.22E-15 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 SUPERFAMILY SSF82114 174 307 3.05E-43 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 Pfam PF01687 Riboflavin kinase 184 305 7.1E-37 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 Gene3D G3DSA:3.40.50.620 1 179 2.2E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 9.9E-118 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 Pfam PF06574 FAD synthetase 12 167 6.1E-58 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 Gene3D G3DSA:2.40.30.30 180 311 4.0E-38 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 PIRSF PIRSF004491 1 312 5.7E-103 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 SMART SM00904 183 307 1.7E-61 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CKQ55_RS08550 239bd10f9cf658b960952334f82e75ac 312 SUPERFAMILY SSF52374 16 179 7.78E-35 T 29-03-2018 CKQ55_RS24490 9d788847bfae970ba713a0e74719b67f 262 Gene3D G3DSA:3.40.50.300 1 249 1.5E-58 T 29-03-2018 CKQ55_RS24490 9d788847bfae970ba713a0e74719b67f 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24490 9d788847bfae970ba713a0e74719b67f 262 SUPERFAMILY SSF52540 4 234 3.75E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24490 9d788847bfae970ba713a0e74719b67f 262 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 2.5E-103 T 29-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 CKQ55_RS24490 9d788847bfae970ba713a0e74719b67f 262 SMART SM00382 33 216 1.2E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24490 9d788847bfae970ba713a0e74719b67f 262 Pfam PF00005 ABC transporter 24 166 5.9E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS26580 826dd9e8de7dfafa20fd1e670d7460ee 122 Pfam PF11604 Copper binding periplasmic protein CusF 58 120 8.0E-19 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF CKQ55_RS28140 26c0fab4e9c85c74c5751ebf3ddd7560 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 1.0E-119 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 CKQ55_RS28140 26c0fab4e9c85c74c5751ebf3ddd7560 447 SMART SM01150 11 401 1.6E-226 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 Pfam PF01546 Peptidase family M20/M25/M40 73 381 6.4E-34 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 15 375 8.5E-73 T 29-03-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 SUPERFAMILY SSF55031 179 291 1.18E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 Gene3D G3DSA:3.40.630.10 4 283 1.3E-67 T 29-03-2018 CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 Pfam PF07687 Peptidase dimerisation domain 176 284 5.9E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 SUPERFAMILY SSF53187 6 178 2.16E-61 T 29-03-2018 CKQ55_RS01705 8e29c72349c609c0c07bb83049da2c20 391 SUPERFAMILY SSF53187 302 383 2.16E-61 T 29-03-2018 CKQ55_RS28380 6603ceb7fe0309117d0bb1c67cc0ccaf 329 Gene3D G3DSA:3.40.50.720 3 317 2.6E-28 T 29-03-2018 CKQ55_RS28380 6603ceb7fe0309117d0bb1c67cc0ccaf 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 214 2.9E-10 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS28380 6603ceb7fe0309117d0bb1c67cc0ccaf 329 SUPERFAMILY SSF51735 4 314 4.35E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 1.3E-58 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 Gene3D G3DSA:3.90.1820.10 1 271 1.4E-60 T 29-03-2018 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 Gene3D G3DSA:3.90.1820.10 272 440 3.8E-44 T 29-03-2018 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 SUPERFAMILY SSF51735 3 164 1.45E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 6.2E-65 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 2.8E-51 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CKQ55_RS13165 d8f64e7fc5010a7749b3d3571e24897a 440 SUPERFAMILY SSF56327 168 439 2.54E-93 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CKQ55_RS18710 cd72f1e82de2df5171b1fcbbed1fe5e5 108 Pfam PF12084 Protein of unknown function (DUF3561) 1 108 7.5E-47 T 29-03-2018 IPR022721 Protein of unknown function DUF3561 CKQ55_RS18710 cd72f1e82de2df5171b1fcbbed1fe5e5 108 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 20 95 1.0E-32 T 29-03-2018 IPR022721 Protein of unknown function DUF3561 CKQ55_RS19255 b7e8761854557ad24ef66289ee679ee3 166 Gene3D G3DSA:1.10.10.10 12 69 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19255 b7e8761854557ad24ef66289ee679ee3 166 Gene3D G3DSA:1.10.10.10 116 166 1.1E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19255 b7e8761854557ad24ef66289ee679ee3 166 Hamap MF_01114 Regulatory protein RecX [recX]. 6 166 14.31 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CKQ55_RS19255 b7e8761854557ad24ef66289ee679ee3 166 Pfam PF02631 RecX family 50 162 4.2E-32 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CKQ55_RS19255 b7e8761854557ad24ef66289ee679ee3 166 Gene3D G3DSA:1.10.10.10 70 114 1.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22215 595890249a28f84eac7cbe644780e829 99 Pfam PF01381 Helix-turn-helix 10 52 2.3E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS22215 595890249a28f84eac7cbe644780e829 99 SMART SM00530 8 63 7.9E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS22215 595890249a28f84eac7cbe644780e829 99 Gene3D G3DSA:1.10.260.40 1 99 6.8E-15 T 29-03-2018 CKQ55_RS22215 595890249a28f84eac7cbe644780e829 99 SUPERFAMILY SSF47413 3 68 1.31E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS18985 55de14c36797b2550c0e472d778743c9 284 Pfam PF00950 ABC 3 transport family 10 264 5.4E-78 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CKQ55_RS18985 55de14c36797b2550c0e472d778743c9 284 SUPERFAMILY SSF81345 3 262 9.15E-39 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS18985 55de14c36797b2550c0e472d778743c9 284 Gene3D G3DSA:1.10.3470.10 2 276 6.8E-27 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS11945 b95fde00361948400e1010b845f16b48 246 Gene3D G3DSA:3.40.50.300 24 245 0.0012 T 29-03-2018 CKQ55_RS11945 b95fde00361948400e1010b845f16b48 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 2.6E-75 T 29-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS11945 b95fde00361948400e1010b845f16b48 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 2.0E-51 T 29-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS11945 b95fde00361948400e1010b845f16b48 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 61.668 T 29-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS23410 1c20901fad40b027862c60610972cfce 59 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 48 5.1E-9 T 29-03-2018 IPR019226 Protein of unknown function DUF2158 CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 Gene3D G3DSA:3.40.50.300 465 714 6.4E-50 T 29-03-2018 CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 SMART SM00382 506 692 7.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 SUPERFAMILY SSF52540 470 694 1.81E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 16 708 4.1E-224 T 29-03-2018 IPR017750 ATPase, type I secretion system CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 SUPERFAMILY SSF90123 151 462 3.01E-53 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 Gene3D G3DSA:3.90.70.10 16 144 3.5E-7 T 29-03-2018 CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 Gene3D G3DSA:1.20.1560.10 151 464 7.4E-37 T 29-03-2018 CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 Pfam PF00664 ABC transporter transmembrane region 167 432 8.9E-27 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS01850 7f5c6d2008fcbb0d797f0a67111d6e49 715 Pfam PF00005 ABC transporter 501 646 1.0E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS08025 0ee0ca1dcca78b4dad3e37aee20abacc 456 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS08025 0ee0ca1dcca78b4dad3e37aee20abacc 456 Pfam PF00324 Amino acid permease 19 450 2.8E-126 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS08025 0ee0ca1dcca78b4dad3e37aee20abacc 456 PIRSF PIRSF006060 1 455 6.3E-78 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS12570 90a0fd411ff3ce55b85bed2195c8b3f6 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 102 2.2E-11 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CKQ55_RS18675 70b50c6501e7e8dce5c656c684d05905 306 Pfam PF01867 CRISPR associated protein Cas1 132 225 1.1E-7 T 29-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CKQ55_RS18675 70b50c6501e7e8dce5c656c684d05905 306 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 8 272 1.8E-114 T 29-03-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 CKQ55_RS18675 70b50c6501e7e8dce5c656c684d05905 306 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 299 16.697 T 29-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CKQ55_RS18675 70b50c6501e7e8dce5c656c684d05905 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 16 256 2.1E-50 T 29-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 Gene3D G3DSA:3.40.50.300 1 533 6.1E-42 T 29-03-2018 CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 5.7E-165 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 PIRSF PIRSF003128 1 553 3.0E-156 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 SUPERFAMILY SSF52540 1 217 2.91E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 SUPERFAMILY SSF52540 284 505 1.68E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 SUPERFAMILY SSF52540 4 50 1.68E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19705 017639ff57875e2ec894cfede48b1b8f 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 499 8.0E-18 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CKQ55_RS31635 b4b966c4750f11236ce21a95254ec188 65 Gene3D G3DSA:1.10.10.10 3 64 5.1E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 SUPERFAMILY SSF53822 64 320 2.36E-54 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 Gene3D G3DSA:3.40.50.2300 172 338 1.3E-28 T 29-03-2018 CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 Gene3D G3DSA:3.40.50.2300 62 171 1.9E-31 T 29-03-2018 CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 Gene3D G3DSA:1.10.260.40 5 61 1.2E-13 T 29-03-2018 CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 314 3.0E-22 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 54 3.5E-9 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 SMART SM00354 6 77 4.6E-22 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS14110 021cbfdb3959198bb4fe727579140a59 338 SUPERFAMILY SSF47413 6 65 1.73E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 SUPERFAMILY SSF47090 238 338 1.96E-11 T 29-03-2018 IPR002477 Peptidoglycan binding-like CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 Gene3D G3DSA:1.10.101.10 239 336 5.4E-19 T 29-03-2018 IPR002477 Peptidoglycan binding-like CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 Gene3D G3DSA:2.40.440.10 356 535 1.3E-23 T 29-03-2018 CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 Pfam PF03734 L,D-transpeptidase catalytic domain 359 525 3.0E-30 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 Pfam PF01471 Putative peptidoglycan binding domain 291 330 3.0E-7 T 29-03-2018 IPR002477 Peptidoglycan binding-like CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 SUPERFAMILY SSF141523 466 515 2.09E-19 T 29-03-2018 CKQ55_RS02035 92f6f18e6ce08033b5089c3b2e4a7a55 597 SUPERFAMILY SSF141523 358 410 2.09E-19 T 29-03-2018 CKQ55_RS27905 e326660646ceaddf8b6d2e9b30715c4e 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 6.1E-25 T 29-03-2018 IPR010305 Protein of unknown function DUF903 CKQ55_RS27905 e326660646ceaddf8b6d2e9b30715c4e 73 Gene3D G3DSA:2.30.30.100 21 71 6.1E-26 T 29-03-2018 CKQ55_RS27905 e326660646ceaddf8b6d2e9b30715c4e 73 SUPERFAMILY SSF50182 21 71 7.63E-19 T 29-03-2018 IPR010920 LSM domain CKQ55_RS20400 64cbd4e4cc2bab68d9e64abc5b702bbb 288 Pfam PF04228 Putative neutral zinc metallopeptidase 1 284 3.6E-139 T 29-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CKQ55_RS26160 5aa94d1be623914d1c9e7c2807ed9ac7 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 23.489 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CKQ55_RS26160 5aa94d1be623914d1c9e7c2807ed9ac7 231 SUPERFAMILY SSF52540 1 211 5.31E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26160 5aa94d1be623914d1c9e7c2807ed9ac7 231 PIRSF PIRSF006755 1 225 8.4E-62 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CKQ55_RS26160 5aa94d1be623914d1c9e7c2807ed9ac7 231 Gene3D G3DSA:3.40.50.300 2 216 1.9E-45 T 29-03-2018 CKQ55_RS26160 5aa94d1be623914d1c9e7c2807ed9ac7 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 2.4E-38 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CKQ55_RS26160 5aa94d1be623914d1c9e7c2807ed9ac7 231 Pfam PF13500 AAA domain 4 207 6.9E-28 T 29-03-2018 CKQ55_RS30520 80f7c1aae372df4747fdc50bb89156dc 951 Pfam PF07916 TraG-like protein, N-terminal region 3 454 1.4E-113 T 29-03-2018 IPR012931 TraG-like, N-terminal CKQ55_RS28665 e80899c962546abfa2ce575188d64fef 144 SUPERFAMILY SSF52402 5 144 2.68E-29 T 29-03-2018 CKQ55_RS28665 e80899c962546abfa2ce575188d64fef 144 Gene3D G3DSA:3.40.50.620 2 144 3.8E-30 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS28665 e80899c962546abfa2ce575188d64fef 144 Pfam PF00582 Universal stress protein family 1 144 3.0E-26 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS28665 e80899c962546abfa2ce575188d64fef 144 PRINTS PR01438 Universal stress protein signature 2 20 6.8E-10 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS28665 e80899c962546abfa2ce575188d64fef 144 PRINTS PR01438 Universal stress protein signature 105 117 6.8E-10 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS28665 e80899c962546abfa2ce575188d64fef 144 PRINTS PR01438 Universal stress protein signature 122 144 6.8E-10 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.4E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 SUPERFAMILY SSF53850 93 299 4.81E-43 T 29-03-2018 CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 Gene3D G3DSA:3.40.190.10 93 183 8.9E-24 T 29-03-2018 CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 Gene3D G3DSA:1.10.10.10 1 89 8.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 SUPERFAMILY SSF46785 4 114 1.03E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 Pfam PF03466 LysR substrate binding domain 92 293 7.9E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS18000 dd34a004717a271524318452d99f2bd4 307 Gene3D G3DSA:3.40.190.10 184 266 2.5E-23 T 29-03-2018 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 6.7E-90 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.2E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 Gene3D G3DSA:1.10.10.10 121 226 1.1E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 Gene3D G3DSA:3.40.50.2300 1 120 9.1E-34 T 29-03-2018 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 SMART SM00862 146 221 1.3E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 SMART SM00448 1 111 5.9E-41 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS17600 18531966bace5adaf5ddbf0518754434 226 SUPERFAMILY SSF52172 1 173 1.37E-37 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS00285 5946c4109028e4724404411c6e46d538 113 SMART SM00507 13 83 5.7E-7 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS00285 5946c4109028e4724404411c6e46d538 113 Gene3D G3DSA:3.40.1800.10 6 100 3.9E-10 T 29-03-2018 CKQ55_RS17330 40b5e9ed771ed91aceebfac0c513dfa3 109 SUPERFAMILY SSF102829 6 94 2.35E-25 T 29-03-2018 IPR007838 Cell division protein ZapA-like CKQ55_RS17330 40b5e9ed771ed91aceebfac0c513dfa3 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 38.952 T 29-03-2018 IPR023771 Cell division protein ZapA, eubacteria CKQ55_RS17330 40b5e9ed771ed91aceebfac0c513dfa3 109 Pfam PF05164 Cell division protein ZapA 6 90 6.8E-20 T 29-03-2018 IPR007838 Cell division protein ZapA-like CKQ55_RS14820 5363956055adfbf988b9e5588bc33ded 255 Pfam PF00005 ABC transporter 21 181 6.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS14820 5363956055adfbf988b9e5588bc33ded 255 Gene3D G3DSA:3.40.50.300 1 253 8.9E-57 T 29-03-2018 CKQ55_RS14820 5363956055adfbf988b9e5588bc33ded 255 SMART SM00382 30 230 3.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14820 5363956055adfbf988b9e5588bc33ded 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 5.1E-11 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CKQ55_RS14820 5363956055adfbf988b9e5588bc33ded 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14820 5363956055adfbf988b9e5588bc33ded 255 SUPERFAMILY SSF52540 4 253 8.1E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 SUPERFAMILY SSF81271 280 360 3.27E-36 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 Gene3D G3DSA:3.10.20.30 264 363 3.8E-46 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 SUPERFAMILY SSF52540 3 302 9.06E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 PIRSF PIRSF006641 1 364 1.5E-158 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 Gene3D G3DSA:3.40.50.300 1 80 2.6E-8 T 29-03-2018 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 9.3E-40 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 46.449 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 Pfam PF01926 50S ribosome-binding GTPase 5 122 9.2E-22 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 7.1E-176 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CKQ55_RS24375 9ef8c242c35b7ff765daeab1c5503c21 364 Gene3D G3DSA:1.10.150.300 110 201 3.8E-27 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CKQ55_RS20215 e7ebebf226b741f7603d94fb02e2e20a 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.1E-53 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CKQ55_RS20215 e7ebebf226b741f7603d94fb02e2e20a 206 Gene3D G3DSA:1.25.40.10 24 194 2.2E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS20215 e7ebebf226b741f7603d94fb02e2e20a 206 PIRSF PIRSF006170 1 206 7.4E-56 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 CKQ55_RS20215 e7ebebf226b741f7603d94fb02e2e20a 206 SUPERFAMILY SSF48452 88 188 4.09E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS11475 2f2ad998f55a094624355fe927b1ac3b 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 34.837 T 29-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CKQ55_RS11475 2f2ad998f55a094624355fe927b1ac3b 223 Pfam PF04493 Endonuclease V 13 206 2.2E-73 T 29-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 Pfam PF00482 Type II secretion system (T2SS), protein F 268 388 7.9E-27 T 29-03-2018 IPR018076 Type II secretion system F domain CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 4.0E-29 T 29-03-2018 IPR018076 Type II secretion system F domain CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 5.2E-12 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 5.2E-12 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 5.2E-12 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS08065 aa46e53afffec62ae74c04b7fb397d6d 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 5.2E-12 T 29-03-2018 IPR003004 GspF/PilC family CKQ55_RS01975 a3cd053d65105cda26b49d8ee0d81b64 191 SUPERFAMILY SSF52218 1 168 7.3E-32 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS01975 a3cd053d65105cda26b49d8ee0d81b64 191 Gene3D G3DSA:3.40.50.360 1 190 3.9E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS01975 a3cd053d65105cda26b49d8ee0d81b64 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 7.7E-35 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CKQ55_RS01975 a3cd053d65105cda26b49d8ee0d81b64 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 2.0E-71 T 29-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 CKQ55_RS29280 b99f25f3077657e79fa0c224b6e905c9 340 PIRSF PIRSF038991 1 340 7.7E-88 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CKQ55_RS29280 b99f25f3077657e79fa0c224b6e905c9 340 Pfam PF05145 Transition state regulatory protein AbrB 23 333 1.9E-98 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CKQ55_RS29280 b99f25f3077657e79fa0c224b6e905c9 340 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 3 154 7.8E-41 T 29-03-2018 IPR017516 AbrB duplication CKQ55_RS29280 b99f25f3077657e79fa0c224b6e905c9 340 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 179 333 2.0E-44 T 29-03-2018 IPR017516 AbrB duplication CKQ55_RS17835 b7d55ca44dbf80293b77bf69362ce960 202 Gene3D G3DSA:2.60.40.1090 30 202 9.5E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17835 b7d55ca44dbf80293b77bf69362ce960 202 SUPERFAMILY SSF49401 31 202 3.63E-19 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS17835 b7d55ca44dbf80293b77bf69362ce960 202 Pfam PF00419 Fimbrial protein 33 202 7.1E-7 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07905 22d6efc97fef0a4fa6476731d11ffa6c 256 PIRSF PIRSF006648 10 253 5.8E-22 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS07905 22d6efc97fef0a4fa6476731d11ffa6c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.9E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS07905 22d6efc97fef0a4fa6476731d11ffa6c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.9E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS07905 22d6efc97fef0a4fa6476731d11ffa6c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 3.9E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS07905 22d6efc97fef0a4fa6476731d11ffa6c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.9E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CKQ55_RS07905 22d6efc97fef0a4fa6476731d11ffa6c 256 Pfam PF01061 ABC-2 type transporter 9 218 7.1E-39 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 Gene3D G3DSA:1.10.443.10 116 290 1.5E-42 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 11 298 4.5E-108 T 29-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 93 7.6E-23 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 Gene3D G3DSA:1.10.150.130 3 115 6.2E-22 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 SUPERFAMILY SSF47823 10 101 6.08E-11 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 296 58.085 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 SUPERFAMILY SSF56349 109 294 2.68E-54 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS11850 3a714010665f86f97111f724b2e4b8ea 300 Pfam PF00589 Phage integrase family 115 282 2.8E-52 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS14245 ff641f3cbe1ce7725891c68b9e0c92d8 558 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 22 556 1.4E-227 T 29-03-2018 IPR017744 Cellulose biosynthesis protein BcsG CKQ55_RS14245 ff641f3cbe1ce7725891c68b9e0c92d8 558 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 553 2.1E-229 T 29-03-2018 IPR017744 Cellulose biosynthesis protein BcsG CKQ55_RS14245 ff641f3cbe1ce7725891c68b9e0c92d8 558 Gene3D G3DSA:3.40.720.10 154 490 5.2E-7 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 139 1.8E-33 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 Gene3D G3DSA:3.40.50.1450 3 156 6.7E-33 T 29-03-2018 IPR023430 Peptidase HybD-like domain CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 146 4.8E-63 T 29-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 SUPERFAMILY SSF53163 4 151 1.12E-34 T 29-03-2018 IPR023430 Peptidase HybD-like domain CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 Pfam PF01750 Hydrogenase maturation protease 29 136 6.0E-27 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 PRINTS PR00446 Hydrogen uptake protein signature 33 50 1.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS19125 6141f18460b7f4f95f39e26771226ab0 161 PRINTS PR00446 Hydrogen uptake protein signature 67 83 1.6E-12 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CKQ55_RS11745 4b5174b6c7d493bcf7273214d3fe99f0 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 5.0E-20 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS11745 4b5174b6c7d493bcf7273214d3fe99f0 201 SUPERFAMILY SSF55718 10 107 7.36E-7 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS11745 4b5174b6c7d493bcf7273214d3fe99f0 201 Gene3D G3DSA:3.30.1050.10 16 124 2.6E-5 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CKQ55_RS14465 ab86017c1bf0855e6ec1437b2802e786 145 Gene3D G3DSA:3.40.50.620 2 142 1.9E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS14465 ab86017c1bf0855e6ec1437b2802e786 145 PIRSF PIRSF006276 1 141 5.4E-54 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS14465 ab86017c1bf0855e6ec1437b2802e786 145 Pfam PF00582 Universal stress protein family 3 138 3.6E-21 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS14465 ab86017c1bf0855e6ec1437b2802e786 145 SUPERFAMILY SSF52402 3 139 2.26E-32 T 29-03-2018 CKQ55_RS29110 e9092149f59ad3293f1f5c2d37c066ad 250 SMART SM00382 26 219 2.3E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29110 e9092149f59ad3293f1f5c2d37c066ad 250 SUPERFAMILY SSF52540 1 241 6.39E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29110 e9092149f59ad3293f1f5c2d37c066ad 250 Pfam PF00005 ABC transporter 17 171 3.0E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29110 e9092149f59ad3293f1f5c2d37c066ad 250 Gene3D G3DSA:3.40.50.300 1 249 3.4E-69 T 29-03-2018 CKQ55_RS29110 e9092149f59ad3293f1f5c2d37c066ad 250 PIRSF PIRSF039085 1 247 6.3E-96 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS29110 e9092149f59ad3293f1f5c2d37c066ad 250 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS13670 b35718330cf97774b89c178c162a1faf 419 Pfam PF00654 Voltage gated chloride channel 75 411 3.5E-61 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS13670 b35718330cf97774b89c178c162a1faf 419 Gene3D G3DSA:1.10.3080.10 5 418 7.3E-58 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS13670 b35718330cf97774b89c178c162a1faf 419 SUPERFAMILY SSF81340 10 413 2.62E-69 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS13670 b35718330cf97774b89c178c162a1faf 419 PRINTS PR00762 Chloride channel signature 166 185 2.6E-11 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS13670 b35718330cf97774b89c178c162a1faf 419 PRINTS PR00762 Chloride channel signature 360 376 2.6E-11 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS13670 b35718330cf97774b89c178c162a1faf 419 PRINTS PR00762 Chloride channel signature 115 134 2.6E-11 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS16025 0f5449fce1ffc148ecd534a8063efce2 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 9.0E-45 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CKQ55_RS16025 0f5449fce1ffc148ecd534a8063efce2 97 SMART SM01103 3 86 2.2E-41 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CKQ55_RS16025 0f5449fce1ffc148ecd534a8063efce2 97 Gene3D G3DSA:3.30.110.60 2 97 6.8E-29 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CKQ55_RS16025 0f5449fce1ffc148ecd534a8063efce2 97 SUPERFAMILY SSF75471 1 95 2.09E-31 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CKQ55_RS16025 0f5449fce1ffc148ecd534a8063efce2 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.2E-23 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CKQ55_RS16025 0f5449fce1ffc148ecd534a8063efce2 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 2.4E-43 T 29-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CKQ55_RS01745 538e23c4f7a12bf9da210969fb7820b0 260 Pfam PF03609 PTS system sorbose-specific iic component 6 237 5.4E-70 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS01590 b0ea5f08be8b28639dbc2fb7ec1799c2 324 Gene3D G3DSA:3.20.10.10 144 303 2.5E-38 T 29-03-2018 CKQ55_RS01590 b0ea5f08be8b28639dbc2fb7ec1799c2 324 Pfam PF01063 Amino-transferase class IV 50 277 8.3E-42 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS01590 b0ea5f08be8b28639dbc2fb7ec1799c2 324 Gene3D G3DSA:3.30.470.10 3 132 8.5E-24 T 29-03-2018 CKQ55_RS01590 b0ea5f08be8b28639dbc2fb7ec1799c2 324 SUPERFAMILY SSF56752 23 303 2.49E-67 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 SUPERFAMILY SSF48019 212 334 1.36E-32 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 Gene3D G3DSA:3.40.50.300 1 140 3.3E-17 T 29-03-2018 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 Gene3D G3DSA:1.20.272.10 223 343 2.7E-25 T 29-03-2018 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 2.9E-72 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 Gene3D G3DSA:1.10.8.60 143 222 6.7E-23 T 29-03-2018 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 SUPERFAMILY SSF52540 1 210 1.62E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 5.9E-102 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CKQ55_RS04110 d1e942786c8b4f4b76b89cc5032c49b6 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.4E-42 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CKQ55_RS28185 af39494014e3cd12c91553d2d5aacb50 175 SUPERFAMILY SSF81342 4 172 1.26E-26 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CKQ55_RS28185 af39494014e3cd12c91553d2d5aacb50 175 Gene3D G3DSA:1.20.950.20 1 175 1.9E-23 T 29-03-2018 CKQ55_RS28185 af39494014e3cd12c91553d2d5aacb50 175 Pfam PF01292 Prokaryotic cytochrome b561 5 172 2.2E-20 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 SUPERFAMILY SSF82171 18 145 1.69E-17 T 29-03-2018 CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 SUPERFAMILY SSF82171 228 239 1.69E-17 T 29-03-2018 CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 SUPERFAMILY SSF82171 266 404 1.69E-17 T 29-03-2018 CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 Pfam PF12566 Protein of unknown function (DUF3748) 64 179 8.2E-51 T 29-03-2018 IPR022223 Protein of unknown function DUF3748 CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 Pfam PF07676 WD40-like Beta Propeller Repeat 378 403 0.0011 T 29-03-2018 IPR011659 WD40-like Beta Propeller CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 Gene3D G3DSA:2.140.10.30 2 146 5.1E-7 T 29-03-2018 CKQ55_RS13130 fd5b84445c76b7b63f8889fcaa64ad0e 408 Gene3D G3DSA:2.140.10.30 147 403 6.9E-17 T 29-03-2018 CKQ55_RS20440 7ea1ea6cac097c27403ee48c5d5d1f1b 194 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 6 186 1.3E-70 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CKQ55_RS20440 7ea1ea6cac097c27403ee48c5d5d1f1b 194 Gene3D G3DSA:3.90.79.10 1 191 1.1E-37 T 29-03-2018 CKQ55_RS20440 7ea1ea6cac097c27403ee48c5d5d1f1b 194 Pfam PF00293 NUDIX domain 45 163 1.6E-10 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS20440 7ea1ea6cac097c27403ee48c5d5d1f1b 194 SUPERFAMILY SSF55811 11 188 1.33E-50 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS20610 a95698b553cf8ebcbbf5c83eb2a0cbf3 235 Pfam PF00117 Glutamine amidotransferase class-I 42 184 2.1E-14 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS20610 a95698b553cf8ebcbbf5c83eb2a0cbf3 235 SUPERFAMILY SSF52317 3 197 3.87E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS20610 a95698b553cf8ebcbbf5c83eb2a0cbf3 235 Gene3D G3DSA:3.40.50.880 1 235 1.2E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS27855 5f5527f919e5761ca1f36922763c05fa 290 SUPERFAMILY SSF53850 43 272 9.42E-38 T 29-03-2018 CKQ55_RS27855 5f5527f919e5761ca1f36922763c05fa 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 273 2.9E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS27855 5f5527f919e5761ca1f36922763c05fa 290 Gene3D G3DSA:3.40.190.10 39 200 2.8E-23 T 29-03-2018 CKQ55_RS27855 5f5527f919e5761ca1f36922763c05fa 290 Gene3D G3DSA:3.40.190.10 201 280 9.4E-6 T 29-03-2018 CKQ55_RS27855 5f5527f919e5761ca1f36922763c05fa 290 SMART SM00062 46 275 4.1E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS08995 2b9f102bc0dad179763ee94638ed3279 87 Gene3D G3DSA:1.20.120.540 40 80 1.6E-4 T 29-03-2018 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal domain Reactome: R-HSA-159418|Reactome: R-HSA-879518 CKQ55_RS08995 2b9f102bc0dad179763ee94638ed3279 87 SUPERFAMILY SSF103473 30 77 1.07E-5 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28915 2ee3ef2fc4a19c14f2a09f6f222620d0 559 Gene3D G3DSA:2.60.120.200 331 540 5.3E-36 T 29-03-2018 CKQ55_RS28915 2ee3ef2fc4a19c14f2a09f6f222620d0 559 SUPERFAMILY SSF75005 4 320 3.71E-93 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS28915 2ee3ef2fc4a19c14f2a09f6f222620d0 559 Gene3D G3DSA:2.115.10.20 2 325 6.9E-68 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CKQ55_RS28915 2ee3ef2fc4a19c14f2a09f6f222620d0 559 Pfam PF04616 Glycosyl hydrolases family 43 4 305 2.5E-93 T 29-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CKQ55_RS28915 2ee3ef2fc4a19c14f2a09f6f222620d0 559 SUPERFAMILY SSF49899 332 538 2.06E-56 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 2.4E-30 T 29-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 4.7E-37 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 Gene3D G3DSA:3.30.70.20 5 197 8.0E-28 T 29-03-2018 CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 Gene3D G3DSA:3.30.70.20 198 236 9.4E-20 T 29-03-2018 CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 1.0E-297 T 29-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 SUPERFAMILY SSF54862 1 503 1.36E-181 T 29-03-2018 CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 Gene3D G3DSA:3.30.70.20 367 467 1.9E-30 T 29-03-2018 CKQ55_RS27755 94299658a39f76fa47a7765d8f3593bc 514 Gene3D G3DSA:3.30.70.20 237 366 1.0E-31 T 29-03-2018 CKQ55_RS11330 a2eca61606627254b75ad526bc9dd0d8 274 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 273 1.5E-143 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS11330 a2eca61606627254b75ad526bc9dd0d8 274 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 273 3.6E-104 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS01550 7f5a4960dc87d26049504365f3e77935 412 Pfam PF07690 Major Facilitator Superfamily 256 398 7.2E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS01550 7f5a4960dc87d26049504365f3e77935 412 Pfam PF07690 Major Facilitator Superfamily 29 253 4.1E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS01550 7f5a4960dc87d26049504365f3e77935 412 Gene3D G3DSA:1.20.1250.20 20 211 1.7E-32 T 29-03-2018 CKQ55_RS01550 7f5a4960dc87d26049504365f3e77935 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS01550 7f5a4960dc87d26049504365f3e77935 412 SUPERFAMILY SSF103473 12 400 2.09E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01550 7f5a4960dc87d26049504365f3e77935 412 Gene3D G3DSA:1.20.1250.20 214 405 1.0E-22 T 29-03-2018 CKQ55_RS13170 8f582f671b9195950330e46267df95b3 115 Gene3D G3DSA:1.20.1630.10 20 115 6.9E-4 T 29-03-2018 CKQ55_RS13170 8f582f671b9195950330e46267df95b3 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 1.5E-16 T 29-03-2018 IPR003807 Domain of unknown function DUF202 CKQ55_RS27460 fd9756c6cc9bf1b25abee2eef0774304 211 Pfam PF09347 Domain of unknown function (DUF1989) 18 183 1.2E-66 T 29-03-2018 IPR018959 Domain of unknown function DUF1989 CKQ55_RS27460 fd9756c6cc9bf1b25abee2eef0774304 211 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 13 210 4.3E-100 T 29-03-2018 IPR017791 Urea carboxylase-associated protein 1 CKQ55_RS02165 e79b4731bdda25de420a704cf91129ee 265 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 18 258 8.8E-44 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS02165 e79b4731bdda25de420a704cf91129ee 265 SUPERFAMILY SSF52518 3 264 6.39E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS02165 e79b4731bdda25de420a704cf91129ee 265 Gene3D G3DSA:3.40.50.970 1 265 2.4E-64 T 29-03-2018 CKQ55_RS08315 6230e7bb1cde38f44e9dfffb533bf06d 231 SUPERFAMILY SSF53639 1 223 2.35E-70 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS08315 6230e7bb1cde38f44e9dfffb533bf06d 231 Gene3D G3DSA:3.40.225.10 1 231 4.5E-60 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS08315 6230e7bb1cde38f44e9dfffb533bf06d 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.1E-133 T 29-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CKQ55_RS08315 6230e7bb1cde38f44e9dfffb533bf06d 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 77.101 T 29-03-2018 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD GO:0008742|GO:0019569 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CKQ55_RS08315 6230e7bb1cde38f44e9dfffb533bf06d 231 SMART SM01007 7 198 4.5E-71 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS08315 6230e7bb1cde38f44e9dfffb533bf06d 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.6E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS08535 6fdd51036379c95163adfd39d037f681 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 1.2E-14 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CKQ55_RS08535 6fdd51036379c95163adfd39d037f681 149 Gene3D G3DSA:3.10.50.40 2 149 1.9E-20 T 29-03-2018 CKQ55_RS08535 6fdd51036379c95163adfd39d037f681 149 SUPERFAMILY SSF54534 5 143 3.73E-36 T 29-03-2018 CKQ55_RS02590 ddbab4983e8390ece51ab776b2781d81 235 SMART SM00052 6 225 3.9E-81 T 29-03-2018 IPR001633 EAL domain CKQ55_RS02590 ddbab4983e8390ece51ab776b2781d81 235 SUPERFAMILY SSF141868 13 217 6.41E-65 T 29-03-2018 IPR001633 EAL domain CKQ55_RS02590 ddbab4983e8390ece51ab776b2781d81 235 Gene3D G3DSA:3.20.20.450 9 219 1.2E-72 T 29-03-2018 IPR001633 EAL domain CKQ55_RS02590 ddbab4983e8390ece51ab776b2781d81 235 Pfam PF00563 EAL domain 12 217 4.8E-56 T 29-03-2018 IPR001633 EAL domain CKQ55_RS19515 68dafa34c8b4911a11371fd379ac0ca6 213 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 10 204 1.0E-74 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CKQ55_RS19515 68dafa34c8b4911a11371fd379ac0ca6 213 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS19515 68dafa34c8b4911a11371fd379ac0ca6 213 Pfam PF00005 ABC transporter 25 161 5.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS19515 68dafa34c8b4911a11371fd379ac0ca6 213 Gene3D G3DSA:3.40.50.300 2 211 2.8E-41 T 29-03-2018 CKQ55_RS19515 68dafa34c8b4911a11371fd379ac0ca6 213 SMART SM00382 33 212 7.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS19515 68dafa34c8b4911a11371fd379ac0ca6 213 SUPERFAMILY SSF52540 8 194 7.1E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS03405 a70aa59d46f91cdb4db7727f0dafa769 243 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.0E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS03405 a70aa59d46f91cdb4db7727f0dafa769 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS03405 a70aa59d46f91cdb4db7727f0dafa769 243 SUPERFAMILY SSF46955 3 90 2.52E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS03405 a70aa59d46f91cdb4db7727f0dafa769 243 SMART SM00422 4 73 1.5E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CKQ55_RS03405 a70aa59d46f91cdb4db7727f0dafa769 243 Gene3D G3DSA:1.10.1660.10 1 120 6.1E-27 T 29-03-2018 CKQ55_RS26335 86ccaeba48d956e867856d6435adfb77 103 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 86 7.9E-30 T 29-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CKQ55_RS23650 e7f2224465d4267fe61fe2f96b14b574 272 SUPERFAMILY SSF117396 1 252 4.45E-63 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CKQ55_RS23650 e7f2224465d4267fe61fe2f96b14b574 272 Gene3D G3DSA:3.20.20.410 1 272 2.6E-59 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CKQ55_RS23650 e7f2224465d4267fe61fe2f96b14b574 272 Pfam PF01904 Protein of unknown function DUF72 21 248 1.9E-49 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CKQ55_RS03990 7a9a2706eb67abff351c9bdd538954f9 250 Pfam PF13242 HAD-hyrolase-like 174 246 2.8E-19 T 29-03-2018 CKQ55_RS03990 7a9a2706eb67abff351c9bdd538954f9 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.5E-22 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CKQ55_RS03990 7a9a2706eb67abff351c9bdd538954f9 250 SUPERFAMILY SSF56784 1 247 3.88E-63 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03990 7a9a2706eb67abff351c9bdd538954f9 250 Gene3D G3DSA:3.40.50.1000 1 250 2.3E-27 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03990 7a9a2706eb67abff351c9bdd538954f9 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 4.2E-63 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CKQ55_RS23335 533cc7819e26a9662c10f18fd2e5367f 131 Pfam PF01042 Endoribonuclease L-PSP 13 127 2.9E-23 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS23335 533cc7819e26a9662c10f18fd2e5367f 131 SUPERFAMILY SSF55298 9 129 4.87E-33 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS23335 533cc7819e26a9662c10f18fd2e5367f 131 Gene3D G3DSA:3.30.1330.40 1 131 7.1E-29 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 SMART SM00418 20 99 1.9E-17 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 5.2E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 5.2E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 Gene3D G3DSA:1.10.10.10 6 108 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 SUPERFAMILY SSF46785 10 98 5.46E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17830 268bf9e822dd56ff12f1143eab1ae168 237 Pfam PF01022 Bacterial regulatory protein, arsR family 29 72 3.8E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS06440 78d61b77eb5246ba50998d153e7c66de 354 Gene3D G3DSA:3.40.1780.10 175 344 1.1E-66 T 29-03-2018 CKQ55_RS06440 78d61b77eb5246ba50998d153e7c66de 354 Gene3D G3DSA:3.40.1780.10 1 135 2.0E-30 T 29-03-2018 CKQ55_RS06440 78d61b77eb5246ba50998d153e7c66de 354 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 3.2E-167 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CKQ55_RS06440 78d61b77eb5246ba50998d153e7c66de 354 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.85 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CKQ55_RS06440 78d61b77eb5246ba50998d153e7c66de 354 Pfam PF02547 Queuosine biosynthesis protein 4 343 3.3E-133 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CKQ55_RS06440 78d61b77eb5246ba50998d153e7c66de 354 SUPERFAMILY SSF111337 1 343 7.59E-139 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 Gene3D G3DSA:3.40.50.300 521 680 5.1E-9 T 29-03-2018 CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 SUPERFAMILY SSF52540 286 379 1.65E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 SUPERFAMILY SSF52540 521 663 1.65E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 SUPERFAMILY SSF52540 406 478 1.65E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 SMART SM00487 267 511 0.0063 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 Gene3D G3DSA:3.40.50.300 156 520 4.7E-14 T 29-03-2018 CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 291 662 2.7E-63 T 29-03-2018 IPR006474 Helicase Cas3, CRISPR-associated, core CKQ55_RS18645 70d0b743c298a4d83a20cb22b0d0e4c2 886 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 22 217 4.3E-24 T 29-03-2018 IPR006483 CRISPR-associated Cas3-HD domain CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 Pfam PF00005 ABC transporter 21 174 4.0E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 Pfam PF00005 ABC transporter 280 437 9.0E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 SMART SM00382 288 491 0.0066 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 SMART SM00382 30 222 5.5E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 SUPERFAMILY SSF52540 4 235 1.25E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 SUPERFAMILY SSF52540 262 504 9.82E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 Gene3D G3DSA:3.40.50.300 2 270 1.1E-54 T 29-03-2018 CKQ55_RS10900 64b620ca2c5aa11115bc3bf5d762e0bb 510 Gene3D G3DSA:3.40.50.300 271 504 2.1E-40 T 29-03-2018 CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 SUPERFAMILY SSF54637 525 675 1.14E-36 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 Pfam PF01575 MaoC like domain 536 650 2.9E-32 T 29-03-2018 IPR002539 MaoC-like domain CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 Gene3D G3DSA:3.40.309.10 269 484 4.8E-39 T 29-03-2018 CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 674 0.0 T 29-03-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 Gene3D G3DSA:3.10.129.10 499 673 3.7E-39 T 29-03-2018 CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 Gene3D G3DSA:3.40.605.10 1 268 1.4E-38 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 SUPERFAMILY SSF53720 5 498 2.62E-81 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28350 2c4094ff5af643ba07afacc598cc765d 681 Pfam PF00171 Aldehyde dehydrogenase family 21 495 3.0E-61 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS19035 e7fa9b34d862b61966195565889cbdd5 445 Gene3D G3DSA:2.40.170.10 28 445 1.6E-93 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS19035 e7fa9b34d862b61966195565889cbdd5 445 SUPERFAMILY SSF56935 31 445 8.55E-92 T 29-03-2018 CKQ55_RS19035 e7fa9b34d862b61966195565889cbdd5 445 Pfam PF02264 LamB porin 33 445 2.0E-88 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS19035 e7fa9b34d862b61966195565889cbdd5 445 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 37 404 4.0E-26 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CKQ55_RS13230 1b8e18384dd8924b6f14e1a9ee5b003c 96 Pfam PF13710 ACT domain 18 78 2.7E-9 T 29-03-2018 CKQ55_RS13230 1b8e18384dd8924b6f14e1a9ee5b003c 96 SUPERFAMILY SSF55021 9 80 5.55E-16 T 29-03-2018 CKQ55_RS13230 1b8e18384dd8924b6f14e1a9ee5b003c 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 75 5.0E-14 T 29-03-2018 CKQ55_RS13230 1b8e18384dd8924b6f14e1a9ee5b003c 96 Gene3D G3DSA:3.30.70.260 1 96 1.5E-19 T 29-03-2018 CKQ55_RS04525 999d41553be73a7163be7a4208861be7 311 Gene3D G3DSA:3.40.50.2300 142 306 6.3E-31 T 29-03-2018 CKQ55_RS04525 999d41553be73a7163be7a4208861be7 311 Gene3D G3DSA:3.40.50.2300 19 141 2.8E-26 T 29-03-2018 CKQ55_RS04525 999d41553be73a7163be7a4208861be7 311 SUPERFAMILY SSF53822 25 304 8.25E-70 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS04525 999d41553be73a7163be7a4208861be7 311 Pfam PF13407 Periplasmic binding protein domain 29 282 3.1E-51 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS17395 06cce8053a4f4888820210b595c16c7e 219 Pfam PF03006 Haemolysin-III related 12 209 1.6E-37 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CKQ55_RS17395 06cce8053a4f4888820210b595c16c7e 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 3.1E-72 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CKQ55_RS11125 0310faa51f381c8d0756d4882042631e 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 2.3E-26 T 29-03-2018 IPR014318 Phage shock protein, PspG CKQ55_RS11125 0310faa51f381c8d0756d4882042631e 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.1E-25 T 29-03-2018 IPR014318 Phage shock protein, PspG CKQ55_RS14545 454d086e771904e58e089becf7801eb1 314 Gene3D G3DSA:1.10.3720.10 2 296 2.6E-43 T 29-03-2018 CKQ55_RS14545 454d086e771904e58e089becf7801eb1 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 313 7.4E-162 T 29-03-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 CKQ55_RS14545 454d086e771904e58e089becf7801eb1 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 6.0E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14545 454d086e771904e58e089becf7801eb1 314 SUPERFAMILY SSF161098 94 290 8.24E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS30685 181d61ffb473e8a5fecce9be9e5cf828 277 Pfam PF02384 N-6 DNA Methylase 139 238 5.9E-10 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CKQ55_RS30685 181d61ffb473e8a5fecce9be9e5cf828 277 SUPERFAMILY SSF53335 121 237 4.78E-17 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30685 181d61ffb473e8a5fecce9be9e5cf828 277 Gene3D G3DSA:3.40.50.150 139 268 1.7E-10 T 29-03-2018 CKQ55_RS30685 181d61ffb473e8a5fecce9be9e5cf828 277 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 140 156 5.0E-6 T 29-03-2018 CKQ55_RS30685 181d61ffb473e8a5fecce9be9e5cf828 277 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 172 186 5.0E-6 T 29-03-2018 CKQ55_RS13685 1b295fe8f698f94952bb8e06a83cdcae 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.2E-71 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS13685 1b295fe8f698f94952bb8e06a83cdcae 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 37.157 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS13685 1b295fe8f698f94952bb8e06a83cdcae 213 SUPERFAMILY SSF53271 2 211 9.38E-52 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS13685 1b295fe8f698f94952bb8e06a83cdcae 213 Gene3D G3DSA:3.40.50.2020 1 193 5.7E-49 T 29-03-2018 CKQ55_RS13685 1b295fe8f698f94952bb8e06a83cdcae 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 5.9E-11 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CKQ55_RS10800 bcd50c00c45a752061c65669b5e9948f 226 Pfam PF03741 Integral membrane protein TerC family 16 185 1.9E-44 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CKQ55_RS10800 bcd50c00c45a752061c65669b5e9948f 226 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 14 186 2.9E-66 T 29-03-2018 IPR022301 Integral membrane protein YjbE CKQ55_RS26930 e559e97971eb30802f663c1ece826c2c 95 Gene3D G3DSA:3.40.50.2300 1 87 5.1E-22 T 29-03-2018 CKQ55_RS26930 e559e97971eb30802f663c1ece826c2c 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 2.5E-15 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS26930 e559e97971eb30802f663c1ece826c2c 95 SUPERFAMILY SSF52794 1 86 3.92E-22 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 4.2E-164 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 SUPERFAMILY SSF51569 1 316 1.15E-117 T 29-03-2018 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.235 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 1.4E-101 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CKQ55_RS08645 3459f0389c76a3dd842e2fe463bf320a 317 Gene3D G3DSA:3.20.20.70 2 316 1.3E-122 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS28995 08449579cff7234562076cdedf51549e 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 445 1.7E-128 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CKQ55_RS28995 08449579cff7234562076cdedf51549e 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 444 3.6E-135 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CKQ55_RS30005 f2e0b8a5dc8dba86f7c49fa6d55f9011 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 295 9.0E-100 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CKQ55_RS30005 f2e0b8a5dc8dba86f7c49fa6d55f9011 304 PIRSF PIRSF026649 1 304 5.2E-92 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CKQ55_RS30005 f2e0b8a5dc8dba86f7c49fa6d55f9011 304 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 2 304 47.905 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CKQ55_RS30005 f2e0b8a5dc8dba86f7c49fa6d55f9011 304 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 3 304 2.0E-133 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CKQ55_RS30005 f2e0b8a5dc8dba86f7c49fa6d55f9011 304 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 1 304 67.974 T 29-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 CKQ55_RS09475 83b0741ec71bd2eaab8b446ee04523ce 454 Gene3D G3DSA:1.20.1250.20 241 454 1.4E-28 T 29-03-2018 CKQ55_RS09475 83b0741ec71bd2eaab8b446ee04523ce 454 Pfam PF00083 Sugar (and other) transporter 39 449 2.2E-36 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS09475 83b0741ec71bd2eaab8b446ee04523ce 454 SUPERFAMILY SSF103473 18 451 3.66E-68 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS09475 83b0741ec71bd2eaab8b446ee04523ce 454 Gene3D G3DSA:1.20.1250.20 15 240 2.9E-29 T 29-03-2018 CKQ55_RS30295 6ace14fc03bfc3707bd376aa131b265f 917 Gene3D G3DSA:3.20.20.140 9 222 8.0E-21 T 29-03-2018 CKQ55_RS30295 6ace14fc03bfc3707bd376aa131b265f 917 SUPERFAMILY SSF52540 269 468 9.02E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30295 6ace14fc03bfc3707bd376aa131b265f 917 SUPERFAMILY SSF52540 763 869 9.02E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30295 6ace14fc03bfc3707bd376aa131b265f 917 SUPERFAMILY SSF89550 7 247 8.63E-25 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CKQ55_RS30295 6ace14fc03bfc3707bd376aa131b265f 917 Gene3D G3DSA:3.40.50.300 268 896 2.8E-24 T 29-03-2018 CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 29-03-2018 CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 Gene3D G3DSA:3.40.50.1000 147 271 1.5E-21 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 29-03-2018 CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.4E-61 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 Gene3D G3DSA:3.40.50.1000 1 115 3.3E-19 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 SUPERFAMILY SSF56784 2 271 1.73E-63 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 6.1E-20 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS03445 979ded98eef40c5b6b53d877b91eb812 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.1E-63 T 29-03-2018 IPR000150 Cof family GO:0016787 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.2E-20 T 29-03-2018 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.2E-20 T 29-03-2018 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.2E-20 T 29-03-2018 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.2E-20 T 29-03-2018 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 SUPERFAMILY SSF51905 4 177 7.62E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 SUPERFAMILY SSF51905 268 385 7.62E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 Pfam PF01494 FAD binding domain 4 346 1.1E-30 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 1.1E-134 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CKQ55_RS17350 c5d3a7f25fe3d6f5b42984c8f49ccbad 400 Gene3D G3DSA:3.50.50.60 1 365 2.5E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 SUPERFAMILY SSF109635 9 109 9.55E-38 T 29-03-2018 CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 3.3E-51 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 3.4E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.16 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 29-03-2018 CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CKQ55_RS07825 e9f622fb574ba8aac3b7ffc233a9712a 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 SMART SM00738 1 100 9.6E-32 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 Gene3D G3DSA:3.30.70.940 1 97 2.5E-18 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 Pfam PF02357 Transcription termination factor nusG 3 96 7.2E-19 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 Gene3D G3DSA:2.30.30.30 111 162 4.0E-4 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 46.491 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 6.3E-64 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CKQ55_RS11715 9faf5a490998ffe6b8b092cf76716e0b 162 SUPERFAMILY SSF82679 2 98 1.44E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CKQ55_RS12590 6070fc7a194a45fca5fdbecbd7544b51 280 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 279 1.8E-78 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS12590 6070fc7a194a45fca5fdbecbd7544b51 280 PIRSF PIRSF001359 1 280 4.9E-85 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS12590 6070fc7a194a45fca5fdbecbd7544b51 280 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 279 2.7E-88 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS12590 6070fc7a194a45fca5fdbecbd7544b51 280 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 132 143 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS12590 6070fc7a194a45fca5fdbecbd7544b51 280 Gene3D G3DSA:3.20.20.70 1 280 2.8E-88 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS12590 6070fc7a194a45fca5fdbecbd7544b51 280 SUPERFAMILY SSF51569 3 279 4.83E-85 T 29-03-2018 CKQ55_RS09910 a5c0a575db8cc332f39f115440fb3ce8 290 SUPERFAMILY SSF161098 49 277 8.63E-54 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09910 a5c0a575db8cc332f39f115440fb3ce8 290 Gene3D G3DSA:1.20.58.370 1 36 9.9E-5 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CKQ55_RS09910 a5c0a575db8cc332f39f115440fb3ce8 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 277 1.1E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09910 a5c0a575db8cc332f39f115440fb3ce8 290 Gene3D G3DSA:1.10.3720.10 56 287 1.6E-44 T 29-03-2018 CKQ55_RS24980 cc2306e0fb8647403ff9638f3ecf2fa3 439 Gene3D G3DSA:1.20.1250.20 237 439 1.3E-21 T 29-03-2018 CKQ55_RS24980 cc2306e0fb8647403ff9638f3ecf2fa3 439 SUPERFAMILY SSF103473 1 436 4.58E-79 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS24980 cc2306e0fb8647403ff9638f3ecf2fa3 439 Gene3D G3DSA:1.20.1250.20 18 217 4.0E-37 T 29-03-2018 CKQ55_RS24980 cc2306e0fb8647403ff9638f3ecf2fa3 439 Pfam PF07690 Major Facilitator Superfamily 30 394 8.3E-54 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS11800 a7235b8a96c7c4e1098ff9e291a189cf 206 PIRSF PIRSF006324 1 205 5.7E-53 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS11800 a7235b8a96c7c4e1098ff9e291a189cf 206 Pfam PF01810 LysE type translocator 14 202 1.7E-48 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS11800 a7235b8a96c7c4e1098ff9e291a189cf 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 2.7E-56 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CKQ55_RS00530 ea78c089805a627587015a27ea0ef0b1 148 SUPERFAMILY SSF46785 7 143 2.06E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00530 ea78c089805a627587015a27ea0ef0b1 148 Gene3D G3DSA:1.10.10.10 2 148 8.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00530 ea78c089805a627587015a27ea0ef0b1 148 Pfam PF01638 HxlR-like helix-turn-helix 20 105 2.1E-19 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type CKQ55_RS29045 972e318c7caf0471b44fccc0cbf09da5 340 Pfam PF02615 Malate/L-lactate dehydrogenase 8 331 8.2E-101 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CKQ55_RS29045 972e318c7caf0471b44fccc0cbf09da5 340 Gene3D G3DSA:1.10.1530.10 5 80 4.4E-20 T 29-03-2018 CKQ55_RS29045 972e318c7caf0471b44fccc0cbf09da5 340 Gene3D G3DSA:3.30.1370.60 81 305 3.1E-74 T 29-03-2018 CKQ55_RS29045 972e318c7caf0471b44fccc0cbf09da5 340 SUPERFAMILY SSF89733 3 335 1.96E-96 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CKQ55_RS16470 fd74ed967729fa2e9e28abcc2ce4dde9 295 Gene3D G3DSA:3.20.20.70 1 291 3.1E-64 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS16470 fd74ed967729fa2e9e28abcc2ce4dde9 295 PIRSF PIRSF038992 31 289 2.6E-78 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS16470 fd74ed967729fa2e9e28abcc2ce4dde9 295 Pfam PF01791 DeoC/LacD family aldolase 52 258 3.2E-17 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS16470 fd74ed967729fa2e9e28abcc2ce4dde9 295 SUPERFAMILY SSF51569 35 275 2.93E-61 T 29-03-2018 CKQ55_RS16470 fd74ed967729fa2e9e28abcc2ce4dde9 295 SMART SM01133 51 259 6.1E-27 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS03610 440c1bd5124d1f5939eb08064720621f 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 2.0E-20 T 29-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CKQ55_RS03610 440c1bd5124d1f5939eb08064720621f 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.6E-14 T 29-03-2018 IPR012994 Membrane bound YbgT-like CKQ55_RS15875 aa2a054842497a0c98a4365fa8f80e02 311 Gene3D G3DSA:3.20.20.70 13 296 1.6E-35 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15875 aa2a054842497a0c98a4365fa8f80e02 311 SMART SM00729 23 247 3.1E-41 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CKQ55_RS15875 aa2a054842497a0c98a4365fa8f80e02 311 Pfam PF04055 Radical SAM superfamily 43 201 3.4E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS15875 aa2a054842497a0c98a4365fa8f80e02 311 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 2.5E-137 T 29-03-2018 IPR005911 Protein YhcC-like GO:0051536 CKQ55_RS15875 aa2a054842497a0c98a4365fa8f80e02 311 Pfam PF16199 Radical_SAM C-terminal domain 208 287 4.3E-17 T 29-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CKQ55_RS15875 aa2a054842497a0c98a4365fa8f80e02 311 SUPERFAMILY SSF102114 13 253 9.94E-45 T 29-03-2018 CKQ55_RS07820 48b18f4dd1b1812852d36d0ac89aadca 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 233 5.3E-90 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CKQ55_RS07820 48b18f4dd1b1812852d36d0ac89aadca 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 57.73 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CKQ55_RS07820 48b18f4dd1b1812852d36d0ac89aadca 238 Pfam PF03749 Sugar fermentation stimulation protein 13 225 3.4E-74 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CKQ55_RS26500 fffee573beb490435ac626a0770289e1 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 326 2.5E-110 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS26500 fffee573beb490435ac626a0770289e1 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 35.204 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS26500 fffee573beb490435ac626a0770289e1 328 Gene3D G3DSA:3.40.718.10 1 328 1.6E-125 T 29-03-2018 CKQ55_RS26500 fffee573beb490435ac626a0770289e1 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 322 4.8E-102 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS26500 fffee573beb490435ac626a0770289e1 328 SUPERFAMILY SSF53659 4 327 1.2E-104 T 29-03-2018 CKQ55_RS25200 f3b980aae7ec5bf4b0ff52683da99b72 121 Gene3D G3DSA:1.10.1780.10 47 100 0.0054 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS25200 f3b980aae7ec5bf4b0ff52683da99b72 121 Gene3D G3DSA:1.10.1780.10 1 46 3.2E-6 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Gene3D G3DSA:3.40.50.300 2 153 3.2E-30 T 29-03-2018 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 SUPERFAMILY SSF52540 7 234 2.91E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Pfam PF16193 AAA C-terminal domain 188 267 1.7E-23 T 29-03-2018 IPR032423 AAA C-terminal domain CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Gene3D G3DSA:1.20.272.10 252 346 3.7E-37 T 29-03-2018 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Gene3D G3DSA:1.10.3710.10 348 447 3.1E-35 T 29-03-2018 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 9.8E-67 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Gene3D G3DSA:1.10.8.60 154 243 3.8E-20 T 29-03-2018 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 SUPERFAMILY SSF48019 252 434 6.8E-73 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 3.6E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS02205 161c02c7d4913190bc34066bd7425a70 447 SMART SM00382 49 165 5.5E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29300 1a76e523ff68fd007f5e299b235847a0 104 SMART SM00450 6 102 2.0E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29300 1a76e523ff68fd007f5e299b235847a0 104 SUPERFAMILY SSF52821 22 92 1.57E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29300 1a76e523ff68fd007f5e299b235847a0 104 Gene3D G3DSA:3.40.250.10 19 102 6.3E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29300 1a76e523ff68fd007f5e299b235847a0 104 Pfam PF00581 Rhodanese-like domain 21 96 2.6E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS29300 1a76e523ff68fd007f5e299b235847a0 104 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 3 100 1.1E-48 T 29-03-2018 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS25135 a7b91d05ba95cfba47c44a34ed318512 255 SMART SM00079 25 247 3.3E-6 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS25135 a7b91d05ba95cfba47c44a34ed318512 255 Gene3D G3DSA:3.40.190.10 170 251 1.0E-13 T 29-03-2018 CKQ55_RS25135 a7b91d05ba95cfba47c44a34ed318512 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 246 5.6E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS25135 a7b91d05ba95cfba47c44a34ed318512 255 Gene3D G3DSA:3.40.190.10 18 169 3.0E-38 T 29-03-2018 CKQ55_RS25135 a7b91d05ba95cfba47c44a34ed318512 255 SUPERFAMILY SSF53850 3 248 2.96E-67 T 29-03-2018 CKQ55_RS25135 a7b91d05ba95cfba47c44a34ed318512 255 SMART SM00062 25 248 4.0E-62 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS17275 d3bf43bf6e87684cd7d199b71c62fe64 298 SUPERFAMILY SSF53850 104 283 1.09E-13 T 29-03-2018 CKQ55_RS17275 d3bf43bf6e87684cd7d199b71c62fe64 298 Gene3D G3DSA:3.40.190.10 144 269 5.9E-6 T 29-03-2018 CKQ55_RS17275 d3bf43bf6e87684cd7d199b71c62fe64 298 SUPERFAMILY SSF46785 8 85 1.41E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17275 d3bf43bf6e87684cd7d199b71c62fe64 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.2E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS17275 d3bf43bf6e87684cd7d199b71c62fe64 298 Gene3D G3DSA:1.10.10.10 5 86 3.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS17275 d3bf43bf6e87684cd7d199b71c62fe64 298 Pfam PF03466 LysR substrate binding domain 92 283 1.4E-11 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS05160 202b9170b2900d08bcfc0ee12931e828 445 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 433 2.0E-141 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CKQ55_RS05160 202b9170b2900d08bcfc0ee12931e828 445 Pfam PF13520 Amino acid permease 7 416 5.3E-39 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS05160 202b9170b2900d08bcfc0ee12931e828 445 PIRSF PIRSF006060 2 441 5.2E-51 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS27480 6ba56673cb531c82a49f411a11cc8432 352 Gene3D G3DSA:3.40.190.10 135 324 1.7E-25 T 29-03-2018 CKQ55_RS27480 6ba56673cb531c82a49f411a11cc8432 352 Pfam PF09084 NMT1/THI5 like 58 237 1.9E-9 T 29-03-2018 IPR015168 SsuA/THI5-like CKQ55_RS27480 6ba56673cb531c82a49f411a11cc8432 352 SUPERFAMILY SSF53850 34 245 1.75E-31 T 29-03-2018 CKQ55_RS27480 6ba56673cb531c82a49f411a11cc8432 352 Gene3D G3DSA:3.40.190.10 35 134 1.1E-5 T 29-03-2018 CKQ55_RS27480 6ba56673cb531c82a49f411a11cc8432 352 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 27 352 8.8E-162 T 29-03-2018 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 Pfam PF03459 TOBE domain 125 187 1.4E-13 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 Pfam PF03459 TOBE domain 199 257 1.8E-11 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 SUPERFAMILY SSF50331 123 192 2.02E-17 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 4.5E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 Gene3D G3DSA:2.40.50.100 108 184 5.1E-18 T 29-03-2018 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 SUPERFAMILY SSF46785 2 106 9.07E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 PIRSF PIRSF005763 1 262 9.5E-99 T 29-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 4.5E-26 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 SUPERFAMILY SSF50331 200 259 9.14E-13 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 Gene3D G3DSA:1.10.10.10 1 107 1.4E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 Gene3D G3DSA:2.40.50.100 185 252 7.4E-13 T 29-03-2018 CKQ55_RS03470 8237e97ea7a5dae488ca057bc28234e5 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 5.2E-41 T 29-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal CKQ55_RS16445 6f9596802ee8d40a66c76e3132f573d2 323 Gene3D G3DSA:3.40.50.1360 73 321 4.9E-29 T 29-03-2018 CKQ55_RS16445 6f9596802ee8d40a66c76e3132f573d2 323 SUPERFAMILY SSF100950 74 319 2.09E-55 T 29-03-2018 CKQ55_RS16445 6f9596802ee8d40a66c76e3132f573d2 323 Gene3D G3DSA:1.10.10.10 5 67 1.9E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16445 6f9596802ee8d40a66c76e3132f573d2 323 Pfam PF04198 Putative sugar-binding domain 71 319 7.0E-64 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CKQ55_RS29310 4f79a035abb8edbf5ddeabd51df3dd7b 119 Pfam PF04024 PspC domain 8 65 4.2E-15 T 29-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CKQ55_RS29310 4f79a035abb8edbf5ddeabd51df3dd7b 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 8 119 2.0E-37 T 29-03-2018 IPR014320 Phage shock protein, PspC CKQ55_RS16155 3ac3dd0bee6b12fa9063f3b9e2704764 167 SUPERFAMILY SSF55729 2 161 2.03E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS16155 3ac3dd0bee6b12fa9063f3b9e2704764 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 124 9.6E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS16155 3ac3dd0bee6b12fa9063f3b9e2704764 167 Gene3D G3DSA:3.40.630.30 9 155 3.2E-19 T 29-03-2018 CKQ55_RS10835 23bf2111e40389e45f235b47936b9d18 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 2.3E-52 T 29-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS10835 23bf2111e40389e45f235b47936b9d18 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 4.7E-53 T 29-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.5E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 Pfam PF03466 LysR substrate binding domain 86 288 7.4E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 Gene3D G3DSA:3.40.190.10 174 262 8.6E-18 T 29-03-2018 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 SUPERFAMILY SSF53850 87 291 1.33E-39 T 29-03-2018 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 Gene3D G3DSA:3.40.190.10 87 173 5.7E-20 T 29-03-2018 CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 SUPERFAMILY SSF46785 2 109 8.71E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11780 d0db79e4a2e470adcf39eee0702ec13c 317 Gene3D G3DSA:1.10.10.10 1 84 8.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15255 4bd7f05b63f8f6a2aa927a44852605f1 119 Gene3D G3DSA:3.40.1260.10 1 119 1.2E-18 T 29-03-2018 CKQ55_RS15255 4bd7f05b63f8f6a2aa927a44852605f1 119 SUPERFAMILY SSF75169 1 119 1.24E-33 T 29-03-2018 IPR027396 DsrEFH-like CKQ55_RS15255 4bd7f05b63f8f6a2aa927a44852605f1 119 Pfam PF02635 DsrE/DsrF-like family 2 116 1.5E-21 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CKQ55_RS15255 4bd7f05b63f8f6a2aa927a44852605f1 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 3.8E-44 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF CKQ55_RS15255 4bd7f05b63f8f6a2aa927a44852605f1 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 34.447 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF CKQ55_RS22355 8c7860fd5a7212571e24658e0df7e930 193 Pfam PF09684 Phage tail protein (Tail_P2_I) 4 136 2.0E-44 T 29-03-2018 IPR006521 Tail protein I CKQ55_RS22355 8c7860fd5a7212571e24658e0df7e930 193 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 3 137 1.2E-49 T 29-03-2018 IPR006521 Tail protein I CKQ55_RS21045 3e3c332cf0151bfee5607d36574819cc 90 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 3.7E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS21045 3e3c332cf0151bfee5607d36574819cc 90 Gene3D G3DSA:3.40.50.2300 1 90 8.3E-19 T 29-03-2018 CKQ55_RS21045 3e3c332cf0151bfee5607d36574819cc 90 SUPERFAMILY SSF52794 1 84 9.55E-21 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 Pfam PF00108 Thiolase, N-terminal domain 4 261 1.1E-100 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 Gene3D G3DSA:3.40.47.10 1 164 4.6E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 SUPERFAMILY SSF53901 271 391 7.84E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 Gene3D G3DSA:3.40.47.10 165 262 8.1E-22 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 Gene3D G3DSA:3.40.47.10 263 389 3.4E-35 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 PIRSF PIRSF000429 1 392 9.5E-134 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.4E-144 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.4E-50 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CKQ55_RS17895 0c386e523a62073c51170360d3342b2e 392 SUPERFAMILY SSF53901 3 269 9.85E-85 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 Pfam PF00155 Aminotransferase class I and II 192 465 2.3E-10 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 2.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 SUPERFAMILY SSF46785 9 81 1.74E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 SUPERFAMILY SSF53383 110 485 7.91E-73 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 Gene3D G3DSA:1.10.10.10 3 80 7.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 Gene3D G3DSA:3.40.640.10 172 372 6.5E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 SMART SM00345 20 79 4.8E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS04645 ded9bfa7c31cd0501a33635b9b169e60 488 Gene3D G3DSA:3.90.1150.10 373 488 2.4E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS23365 306c8e5818e4c7b617fc57a2b513ccad 330 Gene3D G3DSA:3.90.550.10 6 228 1.4E-25 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS23365 306c8e5818e4c7b617fc57a2b513ccad 330 SUPERFAMILY SSF53448 11 194 1.97E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS23365 306c8e5818e4c7b617fc57a2b513ccad 330 Pfam PF00535 Glycosyl transferase family 2 18 182 8.0E-28 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS15515 f6378a1b666f446aed263cca5d484b8f 85 SUPERFAMILY SSF160272 1 85 2.09E-31 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CKQ55_RS15515 f6378a1b666f446aed263cca5d484b8f 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 83 9.6E-29 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CKQ55_RS15515 f6378a1b666f446aed263cca5d484b8f 85 Gene3D G3DSA:3.30.160.140 5 83 7.5E-32 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CKQ55_RS09110 a74db5ff7bfc1b116910f569c94bd56b 170 SUPERFAMILY SSF50475 9 162 7.36E-48 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS09110 a74db5ff7bfc1b116910f569c94bd56b 170 Gene3D G3DSA:2.30.110.10 4 167 3.0E-35 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS09110 a74db5ff7bfc1b116910f569c94bd56b 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 10 163 4.0E-78 T 29-03-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 CKQ55_RS09110 a74db5ff7bfc1b116910f569c94bd56b 170 Pfam PF01613 Flavin reductase like domain 14 162 1.8E-27 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS09110 a74db5ff7bfc1b116910f569c94bd56b 170 SMART SM00903 14 161 1.0E-47 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 Gene3D G3DSA:1.10.287.470 92 163 5.1E-9 T 29-03-2018 CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 Gene3D G3DSA:2.40.50.100 164 366 2.9E-7 T 29-03-2018 CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 282 8.3E-14 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 Pfam PF00529 HlyD membrane-fusion protein of T1SS 198 349 6.0E-7 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 364 1.3E-79 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 SUPERFAMILY SSF111369 47 289 1.96E-77 T 29-03-2018 CKQ55_RS13390 645a2e7e7032ebb0e8f9d6ede0dfeaa7 374 Gene3D G3DSA:2.40.50.100 31 90 1.2E-5 T 29-03-2018 CKQ55_RS12625 51c0f544d21f0acd23dc35570aaf223d 165 SUPERFAMILY SSF52728 1 162 2.62E-44 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS12625 51c0f544d21f0acd23dc35570aaf223d 165 Pfam PF03830 PTS system sorbose subfamily IIB component 2 151 2.2E-47 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS12625 51c0f544d21f0acd23dc35570aaf223d 165 Gene3D G3DSA:3.40.35.10 1 161 2.2E-52 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CKQ55_RS21005 ae82863f64a2b94fd5af2f7117d66e55 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 1.1E-107 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 CKQ55_RS21005 ae82863f64a2b94fd5af2f7117d66e55 297 Gene3D G3DSA:3.40.50.720 1 297 1.5E-41 T 29-03-2018 CKQ55_RS21005 ae82863f64a2b94fd5af2f7117d66e55 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 1.3E-18 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 CKQ55_RS21005 ae82863f64a2b94fd5af2f7117d66e55 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 6.4E-22 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CKQ55_RS21005 ae82863f64a2b94fd5af2f7117d66e55 297 SUPERFAMILY SSF51735 1 296 9.85E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29745 db2e1c7952948961d2a58bc31048f690 386 SUPERFAMILY SSF53850 30 383 4.59E-31 T 29-03-2018 CKQ55_RS29745 db2e1c7952948961d2a58bc31048f690 386 Gene3D G3DSA:3.40.190.10 150 327 4.5E-14 T 29-03-2018 CKQ55_RS29745 db2e1c7952948961d2a58bc31048f690 386 Pfam PF13416 Bacterial extracellular solute-binding protein 61 345 5.0E-15 T 29-03-2018 CKQ55_RS29745 db2e1c7952948961d2a58bc31048f690 386 PIRSF PIRSF029172 1 386 6.5E-172 T 29-03-2018 IPR027020 Protein ynjB CKQ55_RS09725 716e9493d4d1ca8569999db84e3b3631 537 Pfam PF03050 Transposase IS66 family 199 483 3.1E-90 T 29-03-2018 IPR004291 Transposase, IS66 CKQ55_RS09725 716e9493d4d1ca8569999db84e3b3631 537 Pfam PF13007 Transposase C of IS166 homeodomain 63 132 6.9E-15 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain CKQ55_RS09725 716e9493d4d1ca8569999db84e3b3631 537 Pfam PF13817 IS66 C-terminal element 490 526 5.8E-17 T 29-03-2018 CKQ55_RS09725 716e9493d4d1ca8569999db84e3b3631 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 142 184 2.6E-14 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.21 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Gene3D G3DSA:1.20.120.430 122 281 6.4E-28 T 29-03-2018 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 2.4E-34 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Pfam PF12631 MnmE helical domain 123 451 3.1E-61 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 4.3E-100 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Gene3D G3DSA:1.20.120.430 282 454 1.4E-34 T 29-03-2018 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Gene3D G3DSA:3.30.1360.120 1 121 1.5E-40 T 29-03-2018 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 SUPERFAMILY SSF52540 72 152 7.43E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 SUPERFAMILY SSF52540 188 372 7.43E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 1.3E-22 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 Pfam PF01926 50S ribosome-binding GTPase 218 309 1.4E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 SUPERFAMILY SSF116878 379 454 4.05E-51 T 29-03-2018 CKQ55_RS13040 649a03425b616310c58ca0d430405455 454 SUPERFAMILY SSF116878 121 220 4.05E-51 T 29-03-2018 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 SMART SM00342 190 273 8.3E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 Gene3D G3DSA:1.10.10.60 225 282 3.5E-9 T 29-03-2018 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 SUPERFAMILY SSF46689 226 277 5.82E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 Pfam PF12833 Helix-turn-helix domain 197 274 2.2E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 269 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 Gene3D G3DSA:2.60.120.280 17 178 8.1E-11 T 29-03-2018 CKQ55_RS16420 efebd8da3df676a7de5bb3f7ed148739 288 Gene3D G3DSA:1.10.10.60 179 224 5.3E-8 T 29-03-2018 CKQ55_RS26950 55d859e1aa976cf478c18b08fcec2a67 28 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 2 26 1.2E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS25110 fb9ec442f4a0678a72c5b5ed66227f9b 273 SMART SM00382 36 225 7.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS25110 fb9ec442f4a0678a72c5b5ed66227f9b 273 Gene3D G3DSA:3.40.50.300 8 253 5.2E-53 T 29-03-2018 CKQ55_RS25110 fb9ec442f4a0678a72c5b5ed66227f9b 273 Pfam PF00005 ABC transporter 27 175 9.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS25110 fb9ec442f4a0678a72c5b5ed66227f9b 273 SUPERFAMILY SSF52540 7 235 2.78E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 Gene3D G3DSA:3.40.50.720 5 266 2.7E-61 T 29-03-2018 CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 SUPERFAMILY SSF51735 8 265 2.28E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.8E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.8E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.8E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS11310 1ab0d29922c40fa96b06c0f26273ab93 267 Pfam PF00106 short chain dehydrogenase 10 204 5.8E-57 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS07990 66e5ddab7f7a4183f7902a4346b06cac 531 Pfam PF11737 Protein of unknown function (DUF3300) 60 338 4.0E-85 T 29-03-2018 IPR021728 Protein of unknown function DUF3300 CKQ55_RS29295 534a7fdea2de7f6111a7b7c59270c48c 465 Pfam PF04317 YcjX-like family, DUF463 20 464 1.6E-185 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CKQ55_RS29295 534a7fdea2de7f6111a7b7c59270c48c 465 Gene3D G3DSA:3.40.50.300 14 437 1.5E-15 T 29-03-2018 CKQ55_RS29295 534a7fdea2de7f6111a7b7c59270c48c 465 PIRSF PIRSF019381 1 465 3.6E-218 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CKQ55_RS01155 d0782847cd496c4b25b26a11af58df31 463 PIRSF PIRSF006060 7 460 1.3E-76 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS01155 d0782847cd496c4b25b26a11af58df31 463 Pfam PF00324 Amino acid permease 27 429 1.8E-41 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS23215 aa88e8909f3e27d40d8cdd16c59c8242 328 Pfam PF00248 Aldo/keto reductase family 16 307 1.3E-68 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS23215 aa88e8909f3e27d40d8cdd16c59c8242 328 SUPERFAMILY SSF51430 5 308 2.1E-93 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS23215 aa88e8909f3e27d40d8cdd16c59c8242 328 Gene3D G3DSA:3.20.20.100 2 327 4.7E-98 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS13760 c420a923e6c9953677027e5068229492 320 SUPERFAMILY SSF88713 29 234 9.18E-13 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS13760 c420a923e6c9953677027e5068229492 320 Gene3D G3DSA:3.20.20.370 2 320 3.3E-28 T 29-03-2018 CKQ55_RS19065 6b7ced1eecc0d1d7ec180c5ae49787a9 373 Pfam PF01924 Hydrogenase formation hypA family 16 367 1.6E-149 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CKQ55_RS19065 6b7ced1eecc0d1d7ec180c5ae49787a9 373 PIRSF PIRSF005622 1 372 4.5E-154 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CKQ55_RS19065 6b7ced1eecc0d1d7ec180c5ae49787a9 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 370 3.1E-169 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CKQ55_RS10375 aee0f78a71edfdbb08e92231d11dbd7d 219 Pfam PF04225 Opacity-associated protein A LysM-like domain 134 218 1.1E-33 T 29-03-2018 IPR007340 Opacity-associated protein A CKQ55_RS10375 aee0f78a71edfdbb08e92231d11dbd7d 219 Gene3D G3DSA:3.10.350.10 131 190 3.4E-4 T 29-03-2018 CKQ55_RS10375 aee0f78a71edfdbb08e92231d11dbd7d 219 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 50 9.8E-8 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal CKQ55_RS27425 ededfcc407b81651495a3e563c4944e7 490 Gene3D G3DSA:3.90.1150.10 371 488 3.3E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS27425 ededfcc407b81651495a3e563c4944e7 490 Gene3D G3DSA:1.20.1650.10 5 80 3.8E-16 T 29-03-2018 CKQ55_RS27425 ededfcc407b81651495a3e563c4944e7 490 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 67 416 1.2E-63 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CKQ55_RS27425 ededfcc407b81651495a3e563c4944e7 490 SUPERFAMILY SSF53383 15 487 1.25E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS27425 ededfcc407b81651495a3e563c4944e7 490 Gene3D G3DSA:3.40.640.10 92 370 7.7E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS29655 ea14c0729d5b82f8ead98a07c6840348 452 PIRSF PIRSF006351 1 449 3.8E-127 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS29655 ea14c0729d5b82f8ead98a07c6840348 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 2.4E-163 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS29655 ea14c0729d5b82f8ead98a07c6840348 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 1.2E-42 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS29655 ea14c0729d5b82f8ead98a07c6840348 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 2.4E-163 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 2.1E-5 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 8.3E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 8.3E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 8.3E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 8.3E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 8.3E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 Gene3D G3DSA:3.40.50.80 99 233 4.6E-25 T 29-03-2018 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 SUPERFAMILY SSF52343 100 231 5.5E-36 T 29-03-2018 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 SUPERFAMILY SSF63380 3 97 1.65E-21 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 Gene3D G3DSA:2.40.30.10 2 98 1.7E-17 T 29-03-2018 CKQ55_RS11705 1c2dfde221aa7242193b0ccb1ef222d2 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.5E-21 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS22735 62b8775e7249b1dbf7eb4f29cb21d3ac 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.573 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CKQ55_RS22735 62b8775e7249b1dbf7eb4f29cb21d3ac 258 Pfam PF00977 Histidine biosynthesis protein 5 239 5.0E-77 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CKQ55_RS22735 62b8775e7249b1dbf7eb4f29cb21d3ac 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.7E-116 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CKQ55_RS22735 62b8775e7249b1dbf7eb4f29cb21d3ac 258 Gene3D G3DSA:3.20.20.70 4 252 3.3E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22735 62b8775e7249b1dbf7eb4f29cb21d3ac 258 SUPERFAMILY SSF51366 1 257 2.98E-72 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS12995 5addaa85cce1d9a4d9aa141c5b7f6eb8 240 Gene3D G3DSA:3.40.50.1360 1 240 1.3E-50 T 29-03-2018 CKQ55_RS12995 5addaa85cce1d9a4d9aa141c5b7f6eb8 240 SUPERFAMILY SSF100950 1 237 4.4E-55 T 29-03-2018 CKQ55_RS12995 5addaa85cce1d9a4d9aa141c5b7f6eb8 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 24 220 6.6E-20 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CKQ55_RS12995 5addaa85cce1d9a4d9aa141c5b7f6eb8 240 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CKQ55_RS10960 540b1cf22cf30e3c84dcb8d46bf2e6cf 367 SUPERFAMILY SSF49401 208 296 2.2E-14 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS10960 540b1cf22cf30e3c84dcb8d46bf2e6cf 367 SUPERFAMILY SSF49401 335 367 2.2E-14 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS10960 540b1cf22cf30e3c84dcb8d46bf2e6cf 367 Pfam PF00419 Fimbrial protein 203 367 1.6E-12 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS10960 540b1cf22cf30e3c84dcb8d46bf2e6cf 367 Gene3D G3DSA:2.60.40.1090 207 367 2.2E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12030 7a729fb40f27ec91a98ca04654b5a685 320 SUPERFAMILY SSF53613 13 310 2.34E-47 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS12030 7a729fb40f27ec91a98ca04654b5a685 320 Gene3D G3DSA:3.40.1190.20 11 320 4.5E-49 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS12030 7a729fb40f27ec91a98ca04654b5a685 320 Pfam PF00294 pfkB family carbohydrate kinase 14 300 6.1E-37 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS19605 97ce28dc7932da00480cc3d9335d8677 524 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 6.9E-23 T 29-03-2018 IPR010657 ImpA, N-terminal CKQ55_RS19605 97ce28dc7932da00480cc3d9335d8677 524 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 481 3.1E-97 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CKQ55_RS19605 97ce28dc7932da00480cc3d9335d8677 524 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 219 481 9.6E-75 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CKQ55_RS21670 41cd394650377a07c8845f3da2afe0c0 325 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 2.0E-6 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CKQ55_RS21670 41cd394650377a07c8845f3da2afe0c0 325 SUPERFAMILY SSF52540 6 165 7.36E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21670 41cd394650377a07c8845f3da2afe0c0 325 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 169 4.8E-40 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CKQ55_RS21670 41cd394650377a07c8845f3da2afe0c0 325 Gene3D G3DSA:3.40.50.300 1 194 4.7E-28 T 29-03-2018 CKQ55_RS21670 41cd394650377a07c8845f3da2afe0c0 325 SMART SM00833 240 323 9.1E-4 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 201 327 1.5E-48 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 200 336 5.0E-65 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 328 9.8E-97 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 Gene3D G3DSA:3.30.1400.10 199 331 3.8E-54 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 SUPERFAMILY SSF64383 199 332 3.27E-48 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 SMART SM00771 198 328 1.5E-73 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CKQ55_RS20655 eccc8a7f35117e75595890526dd8c3b2 336 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 330 24.747 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 SUPERFAMILY SSF46785 5 62 1.63E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 Gene3D G3DSA:3.40.50.1360 70 239 1.7E-40 T 29-03-2018 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 4.1E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 SMART SM01134 78 238 1.1E-65 T 29-03-2018 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 Pfam PF00455 DeoR C terminal sensor domain 82 237 1.3E-49 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.2E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.2E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 SUPERFAMILY SSF100950 81 239 9.12E-35 T 29-03-2018 CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 Gene3D G3DSA:1.10.10.10 1 58 8.7E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16215 564cc94372e6ef59ccd45717b020b7fa 257 SMART SM00420 6 58 3.8E-19 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS07035 ff094b6d7ff08ee5746f64f669670ba2 291 Gene3D G3DSA:3.40.190.10 23 142 4.7E-14 T 29-03-2018 CKQ55_RS07035 ff094b6d7ff08ee5746f64f669670ba2 291 Gene3D G3DSA:3.40.190.120 143 231 1.2E-30 T 29-03-2018 CKQ55_RS07035 ff094b6d7ff08ee5746f64f669670ba2 291 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 284 1.7E-48 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CKQ55_RS07035 ff094b6d7ff08ee5746f64f669670ba2 291 SUPERFAMILY SSF53850 27 289 1.27E-47 T 29-03-2018 CKQ55_RS11665 a74b8d7a37e9b3d8e8157df829d6be15 483 PIRSF PIRSF006247 1 483 1.2E-184 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CKQ55_RS11665 a74b8d7a37e9b3d8e8157df829d6be15 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.5E-129 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CKQ55_RS11665 a74b8d7a37e9b3d8e8157df829d6be15 483 Pfam PF02386 Cation transport protein 37 477 3.2E-94 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CKQ55_RS11160 11fac0febefcd803587bc36d711bb4cb 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CKQ55_RS11160 11fac0febefcd803587bc36d711bb4cb 122 Gene3D G3DSA:1.10.3830.10 7 119 4.3E-42 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CKQ55_RS11160 11fac0febefcd803587bc36d711bb4cb 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 3.6E-35 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CKQ55_RS16525 24b85427c02dc61501dc7431dd957bff 175 SUPERFAMILY SSF74650 3 145 1.1E-53 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS16525 24b85427c02dc61501dc7431dd957bff 175 Pfam PF02929 Beta galactosidase small chain 3 142 5.0E-44 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS16525 24b85427c02dc61501dc7431dd957bff 175 SMART SM01038 3 143 4.5E-23 T 29-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS16525 24b85427c02dc61501dc7431dd957bff 175 Gene3D G3DSA:2.70.98.10 1 145 1.5E-51 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 SUPERFAMILY SSF51735 3 236 1.72E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.9E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 4.9E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 4.9E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 4.9E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 Pfam PF00106 short chain dehydrogenase 3 180 3.1E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 Gene3D G3DSA:3.40.50.720 2 148 3.7E-40 T 29-03-2018 CKQ55_RS28820 fa5acb1b4d3221314c80968d22000b81 239 Gene3D G3DSA:3.40.50.720 149 216 4.1E-10 T 29-03-2018 CKQ55_RS15960 26272cb71af59f5f5331db8db80d574c 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 153 5.6E-54 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CKQ55_RS15960 26272cb71af59f5f5331db8db80d574c 183 Pfam PF02470 MlaD protein 39 115 7.4E-21 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS09795 89e826e9a247b9498e527176ed27daa9 1213 Gene3D G3DSA:3.40.50.300 58 334 8.5E-6 T 29-03-2018 CKQ55_RS09795 89e826e9a247b9498e527176ed27daa9 1213 SUPERFAMILY SSF52540 233 305 3.62E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS09795 89e826e9a247b9498e527176ed27daa9 1213 SUPERFAMILY SSF52540 62 118 3.62E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28430 9b6e4272d5326e504067ce8148df1ef9 50 SUPERFAMILY SSF88946 6 49 1.8E-6 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS28430 9b6e4272d5326e504067ce8148df1ef9 50 Gene3D G3DSA:1.10.1740.10 3 50 2.0E-6 T 29-03-2018 CKQ55_RS26605 ed3f3bf2983177bcb4d2375915e8ec06 396 Pfam PF07690 Major Facilitator Superfamily 19 267 4.4E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS26605 ed3f3bf2983177bcb4d2375915e8ec06 396 Gene3D G3DSA:1.20.1250.20 7 197 5.7E-17 T 29-03-2018 CKQ55_RS26605 ed3f3bf2983177bcb4d2375915e8ec06 396 Gene3D G3DSA:1.20.1250.20 204 393 2.0E-16 T 29-03-2018 CKQ55_RS26605 ed3f3bf2983177bcb4d2375915e8ec06 396 SUPERFAMILY SSF103473 14 389 3.01E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01030 988282f8b874aa108d6ef0a20ac8bd18 97 SUPERFAMILY SSF54909 6 86 1.31E-17 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS01030 988282f8b874aa108d6ef0a20ac8bd18 97 Pfam PF03795 YCII-related domain 6 84 4.3E-13 T 29-03-2018 IPR005545 YCII-related CKQ55_RS01030 988282f8b874aa108d6ef0a20ac8bd18 97 Gene3D G3DSA:3.30.70.1060 2 88 1.7E-15 T 29-03-2018 CKQ55_RS16425 4bed9dd3b48d94d042fc0042774e03b1 447 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 441 4.6E-124 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS16425 4bed9dd3b48d94d042fc0042774e03b1 447 Gene3D G3DSA:1.20.1250.20 219 442 8.8E-15 T 29-03-2018 CKQ55_RS16425 4bed9dd3b48d94d042fc0042774e03b1 447 Pfam PF13347 MFS/sugar transport protein 13 434 1.0E-109 T 29-03-2018 CKQ55_RS16425 4bed9dd3b48d94d042fc0042774e03b1 447 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 29-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CKQ55_RS16425 4bed9dd3b48d94d042fc0042774e03b1 447 SUPERFAMILY SSF103473 12 427 4.58E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS16425 4bed9dd3b48d94d042fc0042774e03b1 447 Gene3D G3DSA:1.20.1250.20 12 218 1.8E-18 T 29-03-2018 CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 Pfam PF13247 4Fe-4S dicluster domain 92 185 2.6E-29 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 Gene3D G3DSA:3.30.70.20 152 231 6.7E-22 T 29-03-2018 CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 Gene3D G3DSA:3.30.70.20 112 151 7.6E-20 T 29-03-2018 CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 SUPERFAMILY SSF54862 41 220 1.15E-67 T 29-03-2018 CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 Gene3D G3DSA:3.30.70.20 30 56 0.013 T 29-03-2018 CKQ55_RS27005 b1ce9a6164718c214390240c49c00f2f 242 Gene3D G3DSA:3.30.70.20 57 111 3.2E-16 T 29-03-2018 CKQ55_RS04220 64abe304a1b03cdbc1c803b8320f2505 142 Pfam PF00582 Universal stress protein family 1 142 4.4E-27 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS04220 64abe304a1b03cdbc1c803b8320f2505 142 PRINTS PR01438 Universal stress protein signature 103 115 6.3E-14 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS04220 64abe304a1b03cdbc1c803b8320f2505 142 PRINTS PR01438 Universal stress protein signature 2 20 6.3E-14 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS04220 64abe304a1b03cdbc1c803b8320f2505 142 PRINTS PR01438 Universal stress protein signature 120 142 6.3E-14 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS04220 64abe304a1b03cdbc1c803b8320f2505 142 Gene3D G3DSA:3.40.50.620 2 142 2.4E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS04220 64abe304a1b03cdbc1c803b8320f2505 142 SUPERFAMILY SSF52402 1 142 3.93E-27 T 29-03-2018 CKQ55_RS06965 20d8978a592afa4d433253b5ed91b04e 106 Pfam PF17345 Family of unknown function (DUF5375) 1 106 7.1E-61 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CKQ55_RS06965 20d8978a592afa4d433253b5ed91b04e 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 20 106 2.0E-43 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 8.0E-25 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Gene3D G3DSA:2.60.40.10 1 105 2.3E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Pfam PF00128 Alpha amylase, catalytic domain 273 342 9.0E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 SUPERFAMILY SSF51011 623 726 4.68E-33 T 29-03-2018 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 SUPERFAMILY SSF81296 16 115 2.06E-19 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Gene3D G3DSA:2.60.40.10 112 223 9.3E-33 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 SUPERFAMILY SSF81296 117 223 1.24E-33 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 5.2E-21 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Gene3D G3DSA:3.20.20.80 232 612 3.8E-73 T 29-03-2018 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 SUPERFAMILY SSF51445 229 621 8.81E-113 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 SMART SM00642 247 596 5.3E-7 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.282 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 PIRSF PIRSF000463 6 728 7.7E-279 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CKQ55_RS14930 66956502d921b01d5daedc6707b1f782 728 Gene3D G3DSA:2.60.40.1180 623 726 4.5E-32 T 29-03-2018 CKQ55_RS01170 0ca3ea4f24112547c0230db9cc85d258 254 Pfam PF07722 Peptidase C26 8 224 1.5E-68 T 29-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 CKQ55_RS01170 0ca3ea4f24112547c0230db9cc85d258 254 Gene3D G3DSA:3.40.50.880 4 254 2.6E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS01170 0ca3ea4f24112547c0230db9cc85d258 254 SUPERFAMILY SSF52317 7 246 6.96E-41 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 73 401 1.3E-66 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 SUPERFAMILY SSF53686 73 437 8.92E-55 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 Gene3D G3DSA:3.40.50.1100 249 441 4.8E-30 T 29-03-2018 CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 276.161 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 Gene3D G3DSA:3.40.50.1100 72 248 2.6E-26 T 29-03-2018 CKQ55_RS13185 778b0a9fb4765b299d41ba8ef9b3b323 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 3.9E-235 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CKQ55_RS07455 36ff8cd8f41ab339af9f3a8cd90b57e8 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 1.3E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS07455 36ff8cd8f41ab339af9f3a8cd90b57e8 217 SUPERFAMILY SSF161098 9 201 1.96E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS07455 36ff8cd8f41ab339af9f3a8cd90b57e8 217 Gene3D G3DSA:1.10.3720.10 1 217 2.8E-39 T 29-03-2018 CKQ55_RS28880 165c0ccc428101deea85182207f0898b 228 SMART SM00418 17 96 9.1E-15 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CKQ55_RS28880 165c0ccc428101deea85182207f0898b 228 Gene3D G3DSA:1.10.10.10 90 226 0.2 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28880 165c0ccc428101deea85182207f0898b 228 SUPERFAMILY SSF46785 12 96 1.36E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28880 165c0ccc428101deea85182207f0898b 228 Gene3D G3DSA:1.10.10.10 5 89 1.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28880 165c0ccc428101deea85182207f0898b 228 Pfam PF12840 Helix-turn-helix domain 18 75 1.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31725 f5111a314d04f21ebdde5d7d7487add0 1005 Pfam PF13700 Domain of unknown function (DUF4158) 9 173 2.0E-31 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 CKQ55_RS31725 f5111a314d04f21ebdde5d7d7487add0 1005 Pfam PF01526 Tn3 transposase DDE domain 588 978 2.7E-130 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CKQ55_RS09345 1472cabab5c5a0296ff6c992142450ad 384 SUPERFAMILY SSF56796 3 379 3.14E-107 T 29-03-2018 CKQ55_RS09345 1472cabab5c5a0296ff6c992142450ad 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 157 185 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS09345 1472cabab5c5a0296ff6c992142450ad 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 366 3.5E-106 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS09345 1472cabab5c5a0296ff6c992142450ad 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 244 264 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS09345 1472cabab5c5a0296ff6c992142450ad 384 Gene3D G3DSA:3.40.50.1970 1 168 1.4E-41 T 29-03-2018 CKQ55_RS09345 1472cabab5c5a0296ff6c992142450ad 384 Gene3D G3DSA:1.20.1090.10 169 382 2.8E-56 T 29-03-2018 CKQ55_RS10425 3e62781b3d6ec9e0458bf9fa7eb77872 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.9E-28 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS10425 3e62781b3d6ec9e0458bf9fa7eb77872 216 SUPERFAMILY SSF51366 2 215 6.93E-42 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS10425 3e62781b3d6ec9e0458bf9fa7eb77872 216 Gene3D G3DSA:3.20.20.70 1 216 7.3E-28 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS10425 3e62781b3d6ec9e0458bf9fa7eb77872 216 SMART SM00934 5 207 1.4E-35 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS21830 1668cdb7767b8b4df2a024e2853509fe 345 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 11 344 2.0E-182 T 29-03-2018 IPR011960 Gentisate 1,2-dioxygenase CKQ55_RS21830 1668cdb7767b8b4df2a024e2853509fe 345 Pfam PF07883 Cupin domain 94 162 1.5E-25 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS21830 1668cdb7767b8b4df2a024e2853509fe 345 SUPERFAMILY SSF51182 9 343 4.14E-116 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS21830 1668cdb7767b8b4df2a024e2853509fe 345 Gene3D G3DSA:2.60.120.10 59 345 3.9E-41 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS25320 f60618398b7b3b0110148fe2822f39fa 589 SUPERFAMILY SSF161098 300 586 3.01E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25320 f60618398b7b3b0110148fe2822f39fa 589 SUPERFAMILY SSF161098 5 279 1.83E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25320 f60618398b7b3b0110148fe2822f39fa 589 Gene3D G3DSA:1.10.3720.10 302 588 1.5E-31 T 29-03-2018 CKQ55_RS25320 f60618398b7b3b0110148fe2822f39fa 589 Gene3D G3DSA:1.10.3720.10 13 284 2.7E-35 T 29-03-2018 CKQ55_RS25320 f60618398b7b3b0110148fe2822f39fa 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 381 575 9.7E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25320 f60618398b7b3b0110148fe2822f39fa 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 274 2.2E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS00210 bf313ae138dce40d17c0d6a8c118cbb3 1201 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 938 1022 3.1E-13 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CKQ55_RS00210 bf313ae138dce40d17c0d6a8c118cbb3 1201 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 156 227 6.5E-22 T 29-03-2018 IPR013491 Caudovirus, tape measure, N-terminal CKQ55_RS00210 bf313ae138dce40d17c0d6a8c118cbb3 1201 Pfam PF06120 Tail length tape measure protein 466 760 1.2E-97 T 29-03-2018 IPR009302 Tail length tape measure CKQ55_RS00210 bf313ae138dce40d17c0d6a8c118cbb3 1201 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 818 1125 2.4E-57 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CKQ55_RS21120 8136da8c043058956eaa91c4626ae372 224 SUPERFAMILY SSF56770 43 189 1.96E-64 T 29-03-2018 CKQ55_RS21120 8136da8c043058956eaa91c4626ae372 224 Gene3D G3DSA:3.40.50.700 35 209 1.0E-38 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21120 8136da8c043058956eaa91c4626ae372 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 3.6E-22 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21120 8136da8c043058956eaa91c4626ae372 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.233 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21120 8136da8c043058956eaa91c4626ae372 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 1.8E-69 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21120 8136da8c043058956eaa91c4626ae372 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS25685 b139d920ca33260171110d6df75a7746 107 SUPERFAMILY SSF141488 26 104 5.36E-23 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CKQ55_RS25685 b139d920ca33260171110d6df75a7746 107 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 94 3.3E-17 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CKQ55_RS24480 32c84303a8c038ba4004f4d3c21997da 418 SUPERFAMILY SSF53850 41 279 9.1E-34 T 29-03-2018 CKQ55_RS24480 32c84303a8c038ba4004f4d3c21997da 418 Pfam PF13379 NMT1-like family 38 289 1.5E-104 T 29-03-2018 CKQ55_RS24480 32c84303a8c038ba4004f4d3c21997da 418 Gene3D G3DSA:3.40.190.10 159 369 7.1E-40 T 29-03-2018 CKQ55_RS24480 32c84303a8c038ba4004f4d3c21997da 418 Gene3D G3DSA:3.40.190.10 40 143 3.6E-9 T 29-03-2018 CKQ55_RS29065 e8817d8357c1b9464f1bd91b959893a5 492 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 95 487 4.8E-160 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CKQ55_RS29065 e8817d8357c1b9464f1bd91b959893a5 492 SUPERFAMILY SSF53383 92 490 4.08E-118 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS29065 e8817d8357c1b9464f1bd91b959893a5 492 Pfam PF00266 Aminotransferase class-V 113 481 4.2E-138 T 29-03-2018 IPR000192 Aminotransferase class V domain CKQ55_RS29065 e8817d8357c1b9464f1bd91b959893a5 492 Gene3D G3DSA:3.90.1150.10 371 489 1.0E-36 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS29065 e8817d8357c1b9464f1bd91b959893a5 492 Gene3D G3DSA:3.40.640.10 122 370 1.2E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS15215 84b5c0455befd2668f0d798e9250b13f 186 Pfam PF02525 Flavodoxin-like fold 6 172 9.8E-38 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS15215 84b5c0455befd2668f0d798e9250b13f 186 Gene3D G3DSA:3.40.50.360 1 180 1.4E-31 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS15215 84b5c0455befd2668f0d798e9250b13f 186 SUPERFAMILY SSF52218 6 176 1.4E-46 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS18800 6ed195e03a3ba5b8ababc2f83f276b86 179 SUPERFAMILY SSF49401 30 179 1.04E-29 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS18800 6ed195e03a3ba5b8ababc2f83f276b86 179 Pfam PF00419 Fimbrial protein 31 179 1.0E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS18800 6ed195e03a3ba5b8ababc2f83f276b86 179 Gene3D G3DSA:2.60.40.1090 28 179 2.8E-26 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 29-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 SUPERFAMILY SSF53743 2 355 4.97E-151 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 4.0E-81 T 29-03-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Gene3D G3DSA:3.20.14.10 341 589 7.8E-118 T 29-03-2018 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 70.795 T 29-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 SUPERFAMILY SSF50443 356 590 3.66E-126 T 29-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Gene3D G3DSA:3.40.50.1070 5 175 5.6E-70 T 29-03-2018 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 4.6E-83 T 29-03-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 6.3E-55 T 29-03-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CKQ55_RS18465 36d546c6930208d96c05df0a6ded07a1 591 Gene3D G3DSA:3.40.275.10 177 339 2.1E-62 T 29-03-2018 CKQ55_RS18835 4a21b7ee5c7861113d624510b7ef509e 223 SUPERFAMILY SSF46894 150 213 5.1E-5 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 PRINTS PR00682 Isopenicillin N synthase signature 269 287 1.3E-15 T 29-03-2018 CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 PRINTS PR00682 Isopenicillin N synthase signature 155 171 1.3E-15 T 29-03-2018 CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 PRINTS PR00682 Isopenicillin N synthase signature 34 51 1.3E-15 T 29-03-2018 CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 PRINTS PR00682 Isopenicillin N synthase signature 242 268 1.3E-15 T 29-03-2018 CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 134 5.1E-32 T 29-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 182 279 2.0E-15 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 Gene3D G3DSA:2.60.120.330 1 322 7.6E-92 T 29-03-2018 IPR027443 Isopenicillin N synthase-like CKQ55_RS19575 7f3bfa328084467b945a56537e18296d 358 SUPERFAMILY SSF51197 8 321 3.3E-86 T 29-03-2018 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 Pfam PF00083 Sugar (and other) transporter 22 472 1.9E-101 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 468 4.0E-106 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 Gene3D G3DSA:1.20.1250.20 6 216 8.7E-34 T 29-03-2018 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 PRINTS PR00171 Sugar transporter signature 29 39 1.2E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 PRINTS PR00171 Sugar transporter signature 373 394 1.2E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 PRINTS PR00171 Sugar transporter signature 112 131 1.2E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 PRINTS PR00171 Sugar transporter signature 396 408 1.2E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 PRINTS PR00171 Sugar transporter signature 271 281 1.2E-20 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 Gene3D G3DSA:1.20.1250.20 244 473 2.0E-28 T 29-03-2018 CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 SUPERFAMILY SSF103473 13 469 1.96E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS22950 b1fb5402846fa06b785c9d5ba5fadc6b 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS23750 df8d4a735f6749e166105bc56b9f09a5 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CKQ55_RS23750 df8d4a735f6749e166105bc56b9f09a5 603 SUPERFAMILY SSF52016 419 600 1.1E-57 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CKQ55_RS23750 df8d4a735f6749e166105bc56b9f09a5 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS23750 df8d4a735f6749e166105bc56b9f09a5 603 SUPERFAMILY SSF143975 1 418 2.88E-144 T 29-03-2018 CKQ55_RS23750 df8d4a735f6749e166105bc56b9f09a5 603 Pfam PF00920 Dehydratase family 66 598 1.1E-157 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS23750 df8d4a735f6749e166105bc56b9f09a5 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CKQ55_RS13265 f6068e870f9cbb80b8891402bbdcd26b 99 SMART SM00530 31 86 2.5E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS13265 f6068e870f9cbb80b8891402bbdcd26b 99 Pfam PF01381 Helix-turn-helix 34 83 4.4E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CKQ55_RS13265 f6068e870f9cbb80b8891402bbdcd26b 99 SUPERFAMILY SSF47413 26 92 3.1E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS13265 f6068e870f9cbb80b8891402bbdcd26b 99 Gene3D G3DSA:3.30.1190.10 50 96 3.0E-13 T 29-03-2018 CKQ55_RS13265 f6068e870f9cbb80b8891402bbdcd26b 99 Gene3D G3DSA:1.10.10.60 3 49 4.5E-10 T 29-03-2018 CKQ55_RS09075 9e3555f3b3f9074ddb5e6968c9fc0398 285 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 1.5E-161 T 29-03-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 CKQ55_RS09075 9e3555f3b3f9074ddb5e6968c9fc0398 285 Gene3D G3DSA:3.40.830.10 2 276 1.5E-53 T 29-03-2018 CKQ55_RS09075 9e3555f3b3f9074ddb5e6968c9fc0398 285 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 5.7E-83 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CKQ55_RS09075 9e3555f3b3f9074ddb5e6968c9fc0398 285 SUPERFAMILY SSF53213 12 279 3.4E-51 T 29-03-2018 CKQ55_RS12420 b1b8bdcc775143e60179ec721e84edab 453 Pfam PF05048 Periplasmic copper-binding protein (NosD) 161 306 1.0E-9 T 29-03-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CKQ55_RS12420 b1b8bdcc775143e60179ec721e84edab 453 SUPERFAMILY SSF51126 4 374 3.57E-17 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CKQ55_RS12420 b1b8bdcc775143e60179ec721e84edab 453 Gene3D G3DSA:2.160.20.10 2 415 2.2E-63 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS02650 709c4efb7adf715ce851e85808a54272 401 PIRSF PIRSF004810 2 401 5.3E-133 T 29-03-2018 IPR014047 Chromate transporter, long chain CKQ55_RS02650 709c4efb7adf715ce851e85808a54272 401 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 394 7.3E-105 T 29-03-2018 IPR014047 Chromate transporter, long chain CKQ55_RS02650 709c4efb7adf715ce851e85808a54272 401 Pfam PF02417 Chromate transporter 229 395 3.0E-40 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CKQ55_RS02650 709c4efb7adf715ce851e85808a54272 401 Pfam PF02417 Chromate transporter 12 177 3.0E-34 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 Gene3D G3DSA:2.70.98.10 29 398 2.5E-166 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 Gene3D G3DSA:2.60.40.10 404 517 5.4E-43 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 3.4E-197 T 29-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 SUPERFAMILY SSF74650 29 399 2.17E-163 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 SUPERFAMILY SSF81296 403 516 8.68E-33 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 12 515 62.484 T 29-03-2018 IPR023704 Glucan biosynthesis protein G CKQ55_RS00935 27306fc4d755f15e1ec014113031b199 517 PIRSF PIRSF006281 2 517 4.2E-238 T 29-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 SUPERFAMILY SSF74653 157 225 7.46E-21 T 29-03-2018 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 165 237 8.1E-22 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 Gene3D G3DSA:3.30.2420.10 168 241 1.1E-20 T 29-03-2018 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 Pfam PF16031 TonB N-terminal region 33 161 8.9E-37 T 29-03-2018 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 164 235 1.4E-18 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 PRINTS PR01374 Gram-negative bacterial tonB protein signature 180 198 7.9E-38 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 PRINTS PR01374 Gram-negative bacterial tonB protein signature 199 216 7.9E-38 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 PRINTS PR01374 Gram-negative bacterial tonB protein signature 93 103 7.9E-38 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS24740 6a53435fdc593698e43f9f08662c2826 242 PRINTS PR01374 Gram-negative bacterial tonB protein signature 159 180 7.9E-38 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 Pfam PF13437 HlyD family secretion protein 250 354 1.3E-16 T 29-03-2018 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 Pfam PF13533 Biotin-lipoyl like 75 106 4.7E-7 T 29-03-2018 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 263 284 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 296 320 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 381 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 381 401 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 37 60 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 320 343 4.7E-37 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 ProSitePatterns PS00543 HlyD family secretion proteins signature. 366 388 - T 29-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CKQ55_RS01845 b837b38804b9de7b0cee0744266e38ed 401 Gene3D G3DSA:2.40.50.100 65 286 3.6E-17 T 29-03-2018 CKQ55_RS02600 78b95dcae6234ed631a2876ce881c74e 373 SUPERFAMILY SSF53098 182 372 4.25E-20 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02600 78b95dcae6234ed631a2876ce881c74e 373 Pfam PF13518 Helix-turn-helix domain 38 97 2.1E-10 T 29-03-2018 CKQ55_RS02600 78b95dcae6234ed631a2876ce881c74e 373 Gene3D G3DSA:3.30.420.10 183 373 3.4E-35 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS02600 78b95dcae6234ed631a2876ce881c74e 373 Pfam PF00665 Integrase core domain 186 324 1.8E-24 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CKQ55_RS02600 78b95dcae6234ed631a2876ce881c74e 373 Pfam PF09039 Mu DNA binding, I gamma subdomain 111 173 3.4E-4 T 29-03-2018 IPR015126 Mu DNA binding, I gamma subdomain CKQ55_RS02600 78b95dcae6234ed631a2876ce881c74e 373 Gene3D G3DSA:1.10.10.60 106 168 7.9E-15 T 29-03-2018 CKQ55_RS24460 1d3447797fedbf0bcf961729e3ec6362 226 Gene3D G3DSA:3.10.490.10 32 217 5.3E-35 T 29-03-2018 CKQ55_RS24460 1d3447797fedbf0bcf961729e3ec6362 226 Pfam PF04752 ChaC-like protein 47 214 7.8E-52 T 29-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 CKQ55_RS24460 1d3447797fedbf0bcf961729e3ec6362 226 SUPERFAMILY SSF110857 47 160 2.09E-10 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CKQ55_RS07875 0df4c7d89096cbd0ac0a2ffa1501bf7d 193 SUPERFAMILY SSF49401 31 193 2.29E-17 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS07875 0df4c7d89096cbd0ac0a2ffa1501bf7d 193 Pfam PF00419 Fimbrial protein 33 193 8.5E-13 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07875 0df4c7d89096cbd0ac0a2ffa1501bf7d 193 Gene3D G3DSA:2.60.40.1090 30 193 9.8E-19 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.659 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 Pfam PF01252 Signal peptidase (SPase) II 16 155 1.2E-35 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 TIGRFAM TIGR00077 lspA: signal peptidase II 2 164 7.9E-58 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS08540 719087a2123ccf4db7a792d4f39271da 166 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CKQ55_RS14755 efb403791d9c6000f690c55f922ac3e3 222 Gene3D G3DSA:3.40.50.300 1 220 2.2E-61 T 29-03-2018 CKQ55_RS14755 efb403791d9c6000f690c55f922ac3e3 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS14755 efb403791d9c6000f690c55f922ac3e3 222 SUPERFAMILY SSF52540 1 216 4.03E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS14755 efb403791d9c6000f690c55f922ac3e3 222 SMART SM00382 27 214 3.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS14755 efb403791d9c6000f690c55f922ac3e3 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 1.1E-91 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CKQ55_RS14755 efb403791d9c6000f690c55f922ac3e3 222 Pfam PF00005 ABC transporter 18 165 2.5E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS05935 e19feb9267d246dbee54c2d9266622ba 57 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.4E-24 T 29-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 SMART SM00861 593 786 6.0E-65 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Gene3D G3DSA:1.10.287.1150 83 166 6.1E-23 T 29-03-2018 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 SUPERFAMILY SSF52518 577 793 2.26E-52 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 SUPERFAMILY SSF52518 120 548 5.89E-88 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.7E-15 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Pfam PF00676 Dehydrogenase E1 component 220 506 3.7E-47 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Gene3D G3DSA:3.40.50.970 167 519 1.4E-91 T 29-03-2018 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 2.9E-54 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Gene3D G3DSA:3.40.50.970 593 801 2.1E-57 T 29-03-2018 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 PIRSF PIRSF000157 1 934 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CKQ55_RS03730 3d6f128f994f184e3cb8ff89d13c3642 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 1.0E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CKQ55_RS19020 d612181bd72fc98c0c70a20e1e0e4602 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 7.4E-114 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS19020 d612181bd72fc98c0c70a20e1e0e4602 440 PIRSF PIRSF006351 5 435 1.2E-138 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS19020 d612181bd72fc98c0c70a20e1e0e4602 440 Pfam PF02378 Phosphotransferase system, EIIC 33 352 2.7E-54 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS31055 d15c2e313b5bcba245322a6ca1aa3c39 158 SUPERFAMILY SSF53955 19 145 5.93E-28 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS31055 d15c2e313b5bcba245322a6ca1aa3c39 158 Gene3D G3DSA:1.10.530.10 16 158 1.7E-20 T 29-03-2018 CKQ55_RS31055 d15c2e313b5bcba245322a6ca1aa3c39 158 Pfam PF01464 Transglycosylase SLT domain 22 133 1.0E-21 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS24220 6c76e4f998c0340ede51d3bd3f05c013 222 SUPERFAMILY SSF161098 22 201 1.44E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24220 6c76e4f998c0340ede51d3bd3f05c013 222 Gene3D G3DSA:1.10.3720.10 3 217 8.5E-27 T 29-03-2018 CKQ55_RS24220 6c76e4f998c0340ede51d3bd3f05c013 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 215 1.6E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06025 a3e82a130d8016982e32fcc5639bf9f8 400 SUPERFAMILY SSF51445 37 399 5.19E-101 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS06025 a3e82a130d8016982e32fcc5639bf9f8 400 Gene3D G3DSA:3.20.20.80 37 400 1.0E-76 T 29-03-2018 CKQ55_RS06025 a3e82a130d8016982e32fcc5639bf9f8 400 Pfam PF07745 Glycosyl hydrolase family 53 40 399 2.4E-124 T 29-03-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 Pfam PF01274 Malate synthase 13 532 7.8E-212 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 SUPERFAMILY SSF51645 11 532 5.1E-189 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 Gene3D G3DSA:3.20.20.360 83 414 5.4E-108 T 29-03-2018 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 Gene3D G3DSA:1.20.1220.12 415 532 7.9E-48 T 29-03-2018 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 2.7E-251 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 PIRSF PIRSF001363 2 533 3.1E-250 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CKQ55_RS11390 e0c65b32fe168bd47595b220b0f87bb7 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 29-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CKQ55_RS03030 36ef54fd980da53f7f835a8955e56ac8 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 6.6E-59 T 29-03-2018 IPR000150 Cof family GO:0016787 CKQ55_RS03030 36ef54fd980da53f7f835a8955e56ac8 271 Gene3D G3DSA:3.40.50.1000 1 268 2.1E-33 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03030 36ef54fd980da53f7f835a8955e56ac8 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 2.7E-18 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS03030 36ef54fd980da53f7f835a8955e56ac8 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 3.6E-52 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS03030 36ef54fd980da53f7f835a8955e56ac8 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 29-03-2018 CKQ55_RS03030 36ef54fd980da53f7f835a8955e56ac8 271 SUPERFAMILY SSF56784 1 262 1.89E-61 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS05850 5d423de9b66f55089bddc07421870917 247 SUPERFAMILY SSF74653 150 245 1.07E-8 T 29-03-2018 CKQ55_RS05850 5d423de9b66f55089bddc07421870917 247 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 244 3.2E-7 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CKQ55_RS05850 5d423de9b66f55089bddc07421870917 247 Gene3D G3DSA:3.30.1150.10 124 244 7.7E-14 T 29-03-2018 CKQ55_RS05850 5d423de9b66f55089bddc07421870917 247 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 238 3.9E-6 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 SUPERFAMILY SSF47240 10 167 7.06E-51 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 Pfam PF00210 Ferritin-like domain 31 166 2.9E-22 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 Gene3D G3DSA:1.20.1260.10 1 167 1.3E-40 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.3E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.3E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.3E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 PIRSF PIRSF005900 8 167 9.4E-44 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CKQ55_RS03115 06abae344803971de95b16f3a7b005a2 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 49.369 T 29-03-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 CKQ55_RS24225 783dc2df154ebf26e10e246c6ab6afb2 209 SUPERFAMILY SSF161098 15 197 2.62E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24225 783dc2df154ebf26e10e246c6ab6afb2 209 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 59 198 1.2E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24225 783dc2df154ebf26e10e246c6ab6afb2 209 Gene3D G3DSA:1.10.3720.10 2 209 2.6E-19 T 29-03-2018 CKQ55_RS24945 d4ecd4cba86e4ab9e1387256e35037bc 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 41.262 T 29-03-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 CKQ55_RS24945 d4ecd4cba86e4ab9e1387256e35037bc 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 1.0E-42 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CKQ55_RS24945 d4ecd4cba86e4ab9e1387256e35037bc 138 Gene3D G3DSA:3.90.1010.10 1 137 2.6E-47 T 29-03-2018 CKQ55_RS24945 d4ecd4cba86e4ab9e1387256e35037bc 138 SUPERFAMILY SSF82649 3 136 1.88E-44 T 29-03-2018 CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 Gene3D G3DSA:3.20.70.20 2 760 2.9E-295 T 29-03-2018 CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 PIRSF PIRSF000379 8 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 Pfam PF01228 Glycine radical 630 741 4.4E-43 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 1.0E-204 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 SUPERFAMILY SSF51998 4 759 1.13E-291 T 29-03-2018 CKQ55_RS02140 299cc9783aa7d1bd729b6e93c91aa64f 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 Gene3D G3DSA:1.10.1050.10 1 101 1.8E-41 T 29-03-2018 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 SMART SM01390 3 95 2.0E-49 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.119 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 SUPERFAMILY SSF55174 3 206 3.53E-72 T 29-03-2018 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.3E-86 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 Gene3D G3DSA:3.10.290.10 102 145 9.7E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 SMART SM00363 96 160 8.8E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.4E-32 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 Pfam PF01479 S4 domain 97 143 9.8E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CKQ55_RS15435 01ea953846130aacb753e059e3723de5 206 Gene3D G3DSA:1.10.1050.10 146 206 4.0E-18 T 29-03-2018 CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 Gene3D G3DSA:3.40.50.720 2 157 6.8E-51 T 29-03-2018 CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.3E-101 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.2E-6 T 29-03-2018 CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 SUPERFAMILY SSF51735 4 243 2.33E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 5.4E-68 T 29-03-2018 CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.9E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.9E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.9E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.9E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.9E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 Gene3D G3DSA:3.40.50.720 158 242 8.0E-28 T 29-03-2018 CKQ55_RS00775 a3f8a1ea061b790996857abbfe4386f2 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS10145 f79588e756c8633ee4542e3349039cee 161 Gene3D G3DSA:2.30.110.20 3 160 2.4E-49 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS10145 f79588e756c8633ee4542e3349039cee 161 Pfam PF05638 Type VI secretion system effector, Hcp 5 134 2.9E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS10145 f79588e756c8633ee4542e3349039cee 161 SUPERFAMILY SSF141452 4 159 5.36E-48 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS10145 f79588e756c8633ee4542e3349039cee 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 13 140 1.3E-18 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp CKQ55_RS02110 266db56f8f91bdcb1dd83813bc40c8ec 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.8E-94 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CKQ55_RS02110 266db56f8f91bdcb1dd83813bc40c8ec 227 Pfam PF02224 Cytidylate kinase 8 221 5.5E-82 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CKQ55_RS02110 266db56f8f91bdcb1dd83813bc40c8ec 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.401 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CKQ55_RS02110 266db56f8f91bdcb1dd83813bc40c8ec 227 Gene3D G3DSA:3.40.50.300 4 224 6.7E-51 T 29-03-2018 CKQ55_RS02110 266db56f8f91bdcb1dd83813bc40c8ec 227 SUPERFAMILY SSF52540 6 223 5.09E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21370 ab7f4038eed2cb945996391fadf7b9d1 376 Gene3D G3DSA:1.10.620.20 1 346 4.0E-116 T 29-03-2018 CKQ55_RS21370 ab7f4038eed2cb945996391fadf7b9d1 376 SUPERFAMILY SSF47240 3 340 1.05E-116 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS21370 ab7f4038eed2cb945996391fadf7b9d1 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 5.8E-50 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS21370 ab7f4038eed2cb945996391fadf7b9d1 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CKQ55_RS04890 5ef805d52f9e75e893b576e8be89e9c9 143 Pfam PF03610 PTS system fructose IIA component 5 107 9.5E-29 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS04890 5ef805d52f9e75e893b576e8be89e9c9 143 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 4 107 8.1E-35 T 29-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CKQ55_RS04890 5ef805d52f9e75e893b576e8be89e9c9 143 Gene3D G3DSA:3.40.50.510 1 143 1.2E-34 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS04890 5ef805d52f9e75e893b576e8be89e9c9 143 SUPERFAMILY SSF53062 2 134 2.75E-35 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS22675 31a7691a6467350cda0da557ed332c98 296 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 292 3.3E-93 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CKQ55_RS22675 31a7691a6467350cda0da557ed332c98 296 Gene3D G3DSA:3.90.25.10 204 273 1.4E-21 T 29-03-2018 CKQ55_RS22675 31a7691a6467350cda0da557ed332c98 296 Gene3D G3DSA:3.40.50.720 1 174 1.9E-15 T 29-03-2018 CKQ55_RS22675 31a7691a6467350cda0da557ed332c98 296 SUPERFAMILY SSF51735 1 293 9.05E-97 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22675 31a7691a6467350cda0da557ed332c98 296 Gene3D G3DSA:3.90.25.10 175 203 1.3E-5 T 29-03-2018 CKQ55_RS22675 31a7691a6467350cda0da557ed332c98 296 Pfam PF04321 RmlD substrate binding domain 1 293 5.9E-101 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CKQ55_RS22305 72656ab3c0554b07fbc86ba7173ca4a2 96 Pfam PF04550 Phage holin family 2 1 86 2.0E-39 T 29-03-2018 IPR007633 Bacteriophage P2, GpY, holin CKQ55_RS22305 72656ab3c0554b07fbc86ba7173ca4a2 96 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 88 5.0E-23 T 29-03-2018 IPR007633 Bacteriophage P2, GpY, holin CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 Gene3D G3DSA:3.40.190.10 14 147 9.8E-39 T 29-03-2018 CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 SUPERFAMILY SSF53850 8 245 4.6E-75 T 29-03-2018 CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.1E-70 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 SMART SM00079 26 245 1.8E-7 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 Gene3D G3DSA:3.40.190.10 148 248 1.0E-18 T 29-03-2018 CKQ55_RS03120 1dab7c13550b5e518ff0c08c6c62d97c 248 SMART SM00062 26 246 1.7E-73 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS30670 7126ef3038d5ded99e2b9c07a98357cb 164 SUPERFAMILY SSF53955 12 148 1.87E-28 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS30670 7126ef3038d5ded99e2b9c07a98357cb 164 Pfam PF01464 Transglycosylase SLT domain 22 129 4.5E-21 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS30670 7126ef3038d5ded99e2b9c07a98357cb 164 Gene3D G3DSA:1.10.530.10 14 159 3.7E-20 T 29-03-2018 CKQ55_RS26045 d40d42a91d3dfb042215cbf78c4dfcad 551 Gene3D G3DSA:3.50.50.60 24 396 3.4E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26045 d40d42a91d3dfb042215cbf78c4dfcad 551 SUPERFAMILY SSF51905 187 356 1.2E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26045 d40d42a91d3dfb042215cbf78c4dfcad 551 SUPERFAMILY SSF51905 24 155 1.2E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26045 d40d42a91d3dfb042215cbf78c4dfcad 551 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 514 6.4E-202 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CKQ55_RS26045 d40d42a91d3dfb042215cbf78c4dfcad 551 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 517 51.709 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CKQ55_RS26045 d40d42a91d3dfb042215cbf78c4dfcad 551 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 517 3.3E-228 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 44.859 T 29-03-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 5.7E-25 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 SUPERFAMILY SSF55347 128 251 9.65E-14 T 29-03-2018 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 Gene3D G3DSA:3.40.50.720 1 134 1.0E-35 T 29-03-2018 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 238 2.7E-4 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 Gene3D G3DSA:3.30.360.10 135 327 6.4E-23 T 29-03-2018 CKQ55_RS22955 e816582fe028a9036ef4a42527d4f8aa 336 SUPERFAMILY SSF51735 3 152 1.48E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS28335 4d295e26864d2e6691d3c0b8c92eb6f5 251 Pfam PF05138 Phenylacetic acid catabolic protein 4 251 7.0E-95 T 29-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CKQ55_RS28335 4d295e26864d2e6691d3c0b8c92eb6f5 251 SUPERFAMILY SSF47240 7 245 2.35E-81 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS28335 4d295e26864d2e6691d3c0b8c92eb6f5 251 Gene3D G3DSA:1.20.1260.10 2 251 3.0E-74 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS28335 4d295e26864d2e6691d3c0b8c92eb6f5 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 14 251 4.5E-100 T 29-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CKQ55_RS28335 4d295e26864d2e6691d3c0b8c92eb6f5 251 PIRSF PIRSF037834 1 251 7.9E-101 T 29-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 1.2E-5 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 1.2E-5 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 1.2E-5 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 SUPERFAMILY SSF54292 220 321 4.19E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 SUPERFAMILY SSF63380 9 105 2.07E-21 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 Gene3D G3DSA:3.40.50.80 105 224 1.9E-19 T 29-03-2018 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 Pfam PF00970 Oxidoreductase FAD-binding domain 36 104 1.3E-7 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 252 315 1.5E-13 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 SUPERFAMILY SSF52343 102 232 6.16E-25 T 29-03-2018 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 Gene3D G3DSA:2.40.30.10 8 104 9.4E-18 T 29-03-2018 CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 Gene3D G3DSA:3.10.20.30 225 322 1.5E-21 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS02305 45dac4c89e2789a1485de11bfa4d93e0 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 210 4.9E-8 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CKQ55_RS07195 00743b27bfca2fb2624c359ccb3bb988 357 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 7 357 9.6E-144 T 29-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 CKQ55_RS07195 00743b27bfca2fb2624c359ccb3bb988 357 Pfam PF13727 CoA-binding domain 8 131 1.0E-18 T 29-03-2018 CKQ55_RS07195 00743b27bfca2fb2624c359ccb3bb988 357 SUPERFAMILY SSF51735 33 136 1.22E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS07195 00743b27bfca2fb2624c359ccb3bb988 357 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 8 356 8.9E-126 T 29-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CKQ55_RS07195 00743b27bfca2fb2624c359ccb3bb988 357 Gene3D G3DSA:3.40.50.720 30 156 5.3E-11 T 29-03-2018 CKQ55_RS07195 00743b27bfca2fb2624c359ccb3bb988 357 Pfam PF02397 Bacterial sugar transferase 167 348 1.1E-63 T 29-03-2018 IPR003362 Bacterial sugar transferase CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 Gene3D G3DSA:3.40.1190.20 2 310 3.1E-59 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 Pfam PF00294 pfkB family carbohydrate kinase 13 305 1.1E-54 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 Gene3D G3DSA:3.40.50.620 318 477 9.9E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.617 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 SUPERFAMILY SSF52374 340 471 1.52E-21 T 29-03-2018 CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 SUPERFAMILY SSF53613 12 309 1.48E-59 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 2.6E-128 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.8E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 Pfam PF01467 Cytidylyltransferase-like 345 435 1.4E-13 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CKQ55_RS16735 bef5f5830b7d84bcee496d834a6deb8c 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 1.3E-63 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 Gene3D G3DSA:3.30.390.10 345 382 0.0078 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 SMART SM00922 125 230 6.6E-18 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 Gene3D G3DSA:3.30.390.10 1 122 7.5E-41 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 SUPERFAMILY SSF51604 95 357 1.83E-71 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 SUPERFAMILY SSF54826 1 112 4.66E-32 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 Pfam PF13378 Enolase C-terminal domain-like 139 355 1.3E-53 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 Gene3D G3DSA:3.20.20.120 123 344 5.5E-56 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 9.5E-31 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CKQ55_RS13120 1ec68bd49579c3e3cdc555e8760b9597 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.597 T 29-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 CKQ55_RS15185 a5f80ca69d7df1486c453c9d7abccd33 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 240 281 - T 29-03-2018 IPR000952 AB hydrolase 4, conserved site CKQ55_RS15185 a5f80ca69d7df1486c453c9d7abccd33 340 Gene3D G3DSA:3.40.50.1820 12 340 2.0E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS15185 a5f80ca69d7df1486c453c9d7abccd33 340 SUPERFAMILY SSF53474 37 316 8.31E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS15185 a5f80ca69d7df1486c453c9d7abccd33 340 Pfam PF00561 alpha/beta hydrolase fold 74 313 9.8E-23 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS15185 a5f80ca69d7df1486c453c9d7abccd33 340 PIRSF PIRSF005211 14 340 9.1E-107 T 29-03-2018 IPR012020 AB hydrolase 4 family CKQ55_RS20905 48e853a83df638b623b1cf9ab1f3a0a7 391 SUPERFAMILY SSF103473 16 390 8.89E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20905 48e853a83df638b623b1cf9ab1f3a0a7 391 Gene3D G3DSA:1.20.1250.20 12 200 6.6E-17 T 29-03-2018 CKQ55_RS20905 48e853a83df638b623b1cf9ab1f3a0a7 391 Pfam PF07690 Major Facilitator Superfamily 224 385 8.9E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS20905 48e853a83df638b623b1cf9ab1f3a0a7 391 Gene3D G3DSA:1.20.1250.20 216 391 3.1E-22 T 29-03-2018 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 14 102 2.6E-18 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 10 687 0.0 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 Gene3D G3DSA:3.20.20.80 162 588 4.0E-108 T 29-03-2018 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 Gene3D G3DSA:2.60.40.1180 589 689 2.6E-11 T 29-03-2018 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 SMART SM00642 168 574 1.7E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 Gene3D G3DSA:2.60.40.10 10 161 1.7E-46 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 SUPERFAMILY SSF51011 590 687 6.55E-10 T 29-03-2018 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 Pfam PF00128 Alpha amylase, catalytic domain 197 296 7.3E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 SUPERFAMILY SSF81296 9 155 7.0E-47 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 SUPERFAMILY SSF51445 505 582 3.23E-130 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS27305 6c702c2b52668d7056f00a6e07ccbf18 689 SUPERFAMILY SSF51445 143 476 3.23E-130 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS06270 7dc329ff00eccac5b3f730ba18e1a6f3 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 94 2.6E-20 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS06270 7dc329ff00eccac5b3f730ba18e1a6f3 273 SUPERFAMILY SSF51735 108 254 1.7E-23 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS06270 7dc329ff00eccac5b3f730ba18e1a6f3 273 SUPERFAMILY SSF53223 2 105 6.91E-24 T 29-03-2018 CKQ55_RS06270 7dc329ff00eccac5b3f730ba18e1a6f3 273 Gene3D G3DSA:3.40.50.720 119 265 2.6E-20 T 29-03-2018 CKQ55_RS06270 7dc329ff00eccac5b3f730ba18e1a6f3 273 Gene3D G3DSA:3.40.50.10860 1 118 4.3E-30 T 29-03-2018 CKQ55_RS26105 f56a17d555f1c7a354dd28397d1a18cd 120 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 120 30.337 T 29-03-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 CKQ55_RS26105 f56a17d555f1c7a354dd28397d1a18cd 120 SUPERFAMILY SSF103481 6 105 7.85E-16 T 29-03-2018 CKQ55_RS26105 f56a17d555f1c7a354dd28397d1a18cd 120 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.6E-24 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 Gene3D G3DSA:3.40.1410.10 88 253 5.4E-32 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 85 1.0E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 SMART SM00866 106 246 5.9E-24 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 SUPERFAMILY SSF46785 19 110 1.54E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 251 2.8E-96 T 29-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 SMART SM00345 26 85 3.5E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 SUPERFAMILY SSF64288 73 249 1.88E-36 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 Pfam PF07702 UTRA domain 106 246 1.9E-28 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.2E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.2E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS07050 494da42618a792b40aae256a70fefb74 253 Gene3D G3DSA:1.10.10.10 12 87 5.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08375 b638f305623a432299d36816664b7035 273 Gene3D G3DSA:3.40.50.150 2 210 3.2E-52 T 29-03-2018 CKQ55_RS08375 b638f305623a432299d36816664b7035 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CKQ55_RS08375 b638f305623a432299d36816664b7035 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 1.6E-84 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CKQ55_RS08375 b638f305623a432299d36816664b7035 273 SMART SM00650 25 198 1.9E-83 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CKQ55_RS08375 b638f305623a432299d36816664b7035 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 2.5E-90 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CKQ55_RS08375 b638f305623a432299d36816664b7035 273 Gene3D G3DSA:1.10.8.100 211 264 1.8E-19 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CKQ55_RS08375 b638f305623a432299d36816664b7035 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.887 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CKQ55_RS08375 b638f305623a432299d36816664b7035 273 SUPERFAMILY SSF53335 17 266 9.2E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS27265 861eb9eea49082cd81813c61189061ed 69 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 18 69 2.4E-14 T 29-03-2018 IPR012667 Cobalt transporter subunit CbtB, putative CKQ55_RS10220 1e73df73ce34c5b4993cda58faa089a0 503 SUPERFAMILY SSF53720 3 487 1.96E-138 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS10220 1e73df73ce34c5b4993cda58faa089a0 503 Gene3D G3DSA:3.40.309.10 269 463 3.2E-57 T 29-03-2018 CKQ55_RS10220 1e73df73ce34c5b4993cda58faa089a0 503 Gene3D G3DSA:3.40.605.10 1 268 3.3E-79 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS10220 1e73df73ce34c5b4993cda58faa089a0 503 Pfam PF00171 Aldehyde dehydrogenase family 15 481 4.3E-138 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS10220 1e73df73ce34c5b4993cda58faa089a0 503 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 485 3.4E-173 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 CKQ55_RS27355 e68d343428bec3c49cfda17bc8d8444b 441 Pfam PF02638 Glycosyl hydrolase-like 10 57 392 4.2E-121 T 29-03-2018 IPR003790 Glycosyl hydrolase-like 10 CKQ55_RS27355 e68d343428bec3c49cfda17bc8d8444b 441 Gene3D G3DSA:3.20.20.80 89 365 4.2E-45 T 29-03-2018 CKQ55_RS27355 e68d343428bec3c49cfda17bc8d8444b 441 SUPERFAMILY SSF51445 88 390 3.77E-32 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS15930 f62bc470db2fbfb3b3baa02cf9546464 191 PIRSF PIRSF028513 1 186 8.9E-41 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CKQ55_RS15930 f62bc470db2fbfb3b3baa02cf9546464 191 Gene3D G3DSA:2.60.450.10 46 150 1.3E-5 T 29-03-2018 CKQ55_RS15930 f62bc470db2fbfb3b3baa02cf9546464 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.861 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CKQ55_RS15930 f62bc470db2fbfb3b3baa02cf9546464 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 2.7E-55 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CKQ55_RS15930 f62bc470db2fbfb3b3baa02cf9546464 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 5.3E-54 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CKQ55_RS09590 5852439d3ec9461be63ae48645857529 485 Pfam PF13148 Protein of unknown function (DUF3987) 34 395 1.3E-81 T 29-03-2018 IPR025048 Protein of unknown function DUF3987) CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 138 159 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 89 9.2E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 SMART SM00829 10 317 3.0E-35 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 SUPERFAMILY SSF51735 109 270 2.01E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 SUPERFAMILY SSF50129 8 139 3.77E-32 T 29-03-2018 IPR011032 GroES-like CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 Pfam PF00107 Zinc-binding dehydrogenase 149 271 9.9E-31 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 Gene3D G3DSA:3.90.180.10 252 318 1.0E-5 T 29-03-2018 CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 Gene3D G3DSA:3.90.180.10 1 135 7.5E-38 T 29-03-2018 CKQ55_RS23340 4760b39fe30f5812834cba582d8ecebf 319 Gene3D G3DSA:3.40.50.720 136 251 1.6E-30 T 29-03-2018 CKQ55_RS30760 c4926dca4003021d8135cbf7dc0c3c3c 185 Gene3D G3DSA:2.40.50.140 1 119 3.9E-43 T 29-03-2018 CKQ55_RS30760 c4926dca4003021d8135cbf7dc0c3c3c 185 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 185 2.3E-54 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CKQ55_RS30760 c4926dca4003021d8135cbf7dc0c3c3c 185 PIRSF PIRSF002070 2 173 3.7E-39 T 29-03-2018 CKQ55_RS30760 c4926dca4003021d8135cbf7dc0c3c3c 185 SUPERFAMILY SSF50249 4 185 9.6E-56 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS30760 c4926dca4003021d8135cbf7dc0c3c3c 185 Pfam PF00436 Single-strand binding protein family 6 109 2.0E-39 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CKQ55_RS30760 c4926dca4003021d8135cbf7dc0c3c3c 185 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 38.086 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CKQ55_RS16515 129790fdef8c7144a342019c243d8a91 477 PIRSF PIRSF006060 1 474 9.3E-35 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS16515 129790fdef8c7144a342019c243d8a91 477 Pfam PF13520 Amino acid permease 11 442 9.1E-28 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS00360 95443ed91bcc897040878f447a41a7e5 273 Pfam PF04383 KilA-N domain 20 114 8.7E-15 T 29-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding CKQ55_RS00360 95443ed91bcc897040878f447a41a7e5 273 SMART SM01252 20 117 2.9E-31 T 29-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding CKQ55_RS11535 e0090b1aa51970286d967c37e4fa93db 105 SUPERFAMILY SSF46973 1 100 1.44E-33 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS11535 e0090b1aa51970286d967c37e4fa93db 105 Gene3D G3DSA:1.20.58.80 2 100 2.4E-33 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS11535 e0090b1aa51970286d967c37e4fa93db 105 PIRSF PIRSF000699 1 104 1.6E-32 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS11535 e0090b1aa51970286d967c37e4fa93db 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 1.3E-31 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 SUPERFAMILY SSF52540 6 230 6.45E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 Pfam PF00005 ABC transporter 23 172 2.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 Pfam PF00005 ABC transporter 274 427 1.5E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 Gene3D G3DSA:3.40.50.300 267 495 1.8E-35 T 29-03-2018 CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 SMART SM00382 32 220 1.9E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 SMART SM00382 281 476 1.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 SUPERFAMILY SSF52540 273 484 1.62E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23575 f8783c0e0091001e773b28bd9bedf255 504 Gene3D G3DSA:3.40.50.300 1 245 4.0E-51 T 29-03-2018 CKQ55_RS24825 0c8cba721c5ea65e64c770ff43ff3689 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS24825 0c8cba721c5ea65e64c770ff43ff3689 249 SMART SM00382 25 210 5.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS24825 0c8cba721c5ea65e64c770ff43ff3689 249 Pfam PF00005 ABC transporter 19 162 2.8E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS24825 0c8cba721c5ea65e64c770ff43ff3689 249 Gene3D G3DSA:3.40.50.300 10 242 2.1E-45 T 29-03-2018 CKQ55_RS24825 0c8cba721c5ea65e64c770ff43ff3689 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 248 45.042 T 29-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 CKQ55_RS24825 0c8cba721c5ea65e64c770ff43ff3689 249 SUPERFAMILY SSF52540 17 225 8.04E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30455 9cf352a34edf285447edaf9ec2d29230 25 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 25 9.7E-20 T 29-03-2018 IPR012605 RepA1 leader peptide Tap CKQ55_RS30455 9cf352a34edf285447edaf9ec2d29230 25 Pfam PF08048 Tap RepA1 leader peptide 1 25 6.6E-21 T 29-03-2018 IPR012605 RepA1 leader peptide Tap CKQ55_RS06930 378f248bceac961784ae7b2c5691b2c3 188 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 62 173 3.0E-5 T 29-03-2018 CKQ55_RS06930 378f248bceac961784ae7b2c5691b2c3 188 Pfam PF07455 Phage polarity suppression protein (Psu) 6 186 5.6E-66 T 29-03-2018 IPR010006 Bacteriophage P4, Psu, polarity suppression protein CKQ55_RS23955 8db3105e77b53e55de207109a896aa07 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 4.0E-129 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS23955 8db3105e77b53e55de207109a896aa07 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 2.0E-75 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS01980 d5b52ea51db0bc09136f3b2acc99e2e6 263 SUPERFAMILY SSF161098 56 237 2.35E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01980 d5b52ea51db0bc09136f3b2acc99e2e6 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.2E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01980 d5b52ea51db0bc09136f3b2acc99e2e6 263 Gene3D G3DSA:1.10.3720.10 7 254 1.8E-32 T 29-03-2018 CKQ55_RS19975 efe4d075ad620caf5c5cca4692d9d3b3 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 9.8E-114 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CKQ55_RS19975 efe4d075ad620caf5c5cca4692d9d3b3 243 Gene3D G3DSA:3.20.20.70 4 238 3.4E-108 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS19975 efe4d075ad620caf5c5cca4692d9d3b3 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 136.726 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CKQ55_RS19975 efe4d075ad620caf5c5cca4692d9d3b3 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.3E-107 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CKQ55_RS19975 efe4d075ad620caf5c5cca4692d9d3b3 243 SUPERFAMILY SSF63892 4 242 5.75E-104 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CKQ55_RS01530 18f539b38694af371dcf35122f250a25 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 289 1.6E-141 T 29-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CKQ55_RS01530 18f539b38694af371dcf35122f250a25 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 4.4E-74 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CKQ55_RS01530 18f539b38694af371dcf35122f250a25 291 SUPERFAMILY SSF51621 3 236 1.71E-57 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS01530 18f539b38694af371dcf35122f250a25 291 Gene3D G3DSA:3.20.20.360 2 263 1.7E-47 T 29-03-2018 CKQ55_RS01530 18f539b38694af371dcf35122f250a25 291 PIRSF PIRSF015582 1 291 9.6E-76 T 29-03-2018 IPR011206 Citrate lyase beta subunit-like CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 SUPERFAMILY SSF47616 78 203 4.5E-36 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 Gene3D G3DSA:3.40.30.10 1 93 8.2E-25 T 29-03-2018 CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 197 1.7E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 81 3.1E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 Gene3D G3DSA:1.20.1050.10 94 144 1.3E-12 T 29-03-2018 CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 Gene3D G3DSA:1.20.1050.10 145 200 3.3E-16 T 29-03-2018 CKQ55_RS21015 54a546037beb71b499639ef56233ade5 209 SUPERFAMILY SSF52833 1 84 6.41E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS12515 906bbfee61c28eb1cb4a486528e69bf2 196 Gene3D G3DSA:2.160.10.10 1 192 2.0E-46 T 29-03-2018 CKQ55_RS12515 906bbfee61c28eb1cb4a486528e69bf2 196 SMART SM01266 4 58 6.4E-10 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CKQ55_RS12515 906bbfee61c28eb1cb4a486528e69bf2 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 1.2E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS12515 906bbfee61c28eb1cb4a486528e69bf2 196 SUPERFAMILY SSF51161 3 191 7.76E-52 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS12515 906bbfee61c28eb1cb4a486528e69bf2 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS12515 906bbfee61c28eb1cb4a486528e69bf2 196 Pfam PF12464 Maltose acetyltransferase 6 57 6.2E-8 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CKQ55_RS15120 7c6d8d63b53c2b24baae37f7a06f6e66 394 SUPERFAMILY SSF103473 4 385 1.83E-36 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS15120 7c6d8d63b53c2b24baae37f7a06f6e66 394 Pfam PF07690 Major Facilitator Superfamily 14 320 3.4E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS15120 7c6d8d63b53c2b24baae37f7a06f6e66 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 29.942 T 29-03-2018 IPR023528 Major facilitator superfamily transporter, TsgA CKQ55_RS15120 7c6d8d63b53c2b24baae37f7a06f6e66 394 Gene3D G3DSA:1.20.1250.20 197 388 7.1E-13 T 29-03-2018 CKQ55_RS15120 7c6d8d63b53c2b24baae37f7a06f6e66 394 Gene3D G3DSA:1.20.1250.20 1 196 9.9E-20 T 29-03-2018 CKQ55_RS06890 13bba32dae42f573f52f91d7c09655b3 187 Gene3D G3DSA:3.90.1720.10 48 178 2.1E-30 T 29-03-2018 CKQ55_RS06890 13bba32dae42f573f52f91d7c09655b3 187 SUPERFAMILY SSF54001 49 171 2.62E-33 T 29-03-2018 CKQ55_RS06890 13bba32dae42f573f52f91d7c09655b3 187 Pfam PF00877 NlpC/P60 family 61 165 9.3E-24 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CKQ55_RS09365 177aeede17e4ac414e1ff6ead02bfdc8 206 Gene3D G3DSA:2.40.40.20 71 183 2.7E-5 T 29-03-2018 CKQ55_RS09365 177aeede17e4ac414e1ff6ead02bfdc8 206 Pfam PF06130 Phosphate propanoyltransferase 22 101 1.5E-27 T 29-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CKQ55_RS09365 177aeede17e4ac414e1ff6ead02bfdc8 206 Pfam PF06130 Phosphate propanoyltransferase 131 196 5.6E-18 T 29-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CKQ55_RS09365 177aeede17e4ac414e1ff6ead02bfdc8 206 PIRSF PIRSF010130 1 206 2.0E-89 T 29-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CKQ55_RS06830 8da655280c0c4fafefd576c302cbf697 322 Pfam PF13737 Transposase DDE domain 34 145 8.6E-45 T 29-03-2018 IPR025668 Transposase DDE domain CKQ55_RS22020 8da655280c0c4fafefd576c302cbf697 322 Pfam PF13737 Transposase DDE domain 34 145 8.6E-45 T 29-03-2018 IPR025668 Transposase DDE domain CKQ55_RS21420 6a51467fd74c83709bd5a896c8cf7a69 350 Pfam PF02424 ApbE family 41 324 9.9E-78 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CKQ55_RS21420 6a51467fd74c83709bd5a896c8cf7a69 350 Gene3D G3DSA:3.10.520.10 35 340 5.7E-51 T 29-03-2018 CKQ55_RS21420 6a51467fd74c83709bd5a896c8cf7a69 350 SUPERFAMILY SSF143631 35 345 3.14E-95 T 29-03-2018 IPR003374 ApbE-like domain CKQ55_RS21420 6a51467fd74c83709bd5a896c8cf7a69 350 PIRSF PIRSF006268 4 346 7.3E-89 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CKQ55_RS25390 ecc048b9126ee9216101bdd5a25925ff 856 Gene3D G3DSA:2.60.40.10 17 90 0.35 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS25390 ecc048b9126ee9216101bdd5a25925ff 856 Pfam PF00577 Outer membrane usher protein 201 766 8.9E-189 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS25390 ecc048b9126ee9216101bdd5a25925ff 856 SUPERFAMILY SSF141729 61 175 1.03E-29 T 29-03-2018 CKQ55_RS25390 ecc048b9126ee9216101bdd5a25925ff 856 Pfam PF13954 PapC N-terminal domain 37 183 1.9E-42 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CKQ55_RS25390 ecc048b9126ee9216101bdd5a25925ff 856 Pfam PF13953 PapC C-terminal domain 776 842 3.8E-21 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS00140 e00628d7c6c87513357741bc4fff2b30 217 Gene3D G3DSA:3.40.50.10620 13 37 0.0085 T 29-03-2018 CKQ55_RS00140 e00628d7c6c87513357741bc4fff2b30 217 Gene3D G3DSA:3.40.50.10620 38 112 3.2E-8 T 29-03-2018 CKQ55_RS00140 e00628d7c6c87513357741bc4fff2b30 217 SUPERFAMILY SSF160945 14 154 1.18E-7 T 29-03-2018 CKQ55_RS30080 e00628d7c6c87513357741bc4fff2b30 217 Gene3D G3DSA:3.40.50.10620 13 37 0.0085 T 29-03-2018 CKQ55_RS30080 e00628d7c6c87513357741bc4fff2b30 217 Gene3D G3DSA:3.40.50.10620 38 112 3.2E-8 T 29-03-2018 CKQ55_RS30080 e00628d7c6c87513357741bc4fff2b30 217 SUPERFAMILY SSF160945 14 154 1.18E-7 T 29-03-2018 CKQ55_RS09740 ffb7c48e813244dad08067de254a15d7 220 SUPERFAMILY SSF161098 12 201 2.22E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09740 ffb7c48e813244dad08067de254a15d7 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 5.6E-26 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS09740 ffb7c48e813244dad08067de254a15d7 220 Gene3D G3DSA:1.10.3720.10 2 218 1.7E-35 T 29-03-2018 CKQ55_RS09740 ffb7c48e813244dad08067de254a15d7 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 204 2.2E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 3.5E-290 T 29-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 Pfam PF00171 Aldehyde dehydrogenase family 13 470 1.7E-162 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 Gene3D G3DSA:3.40.309.10 260 456 3.4E-65 T 29-03-2018 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 SUPERFAMILY SSF53720 3 473 3.53E-156 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 76.999 T 29-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CKQ55_RS28015 0475de8ad999f2cd04621b4ff439532e 475 Gene3D G3DSA:3.40.605.10 1 259 1.6E-92 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS22120 e13fa8657f02c68beac0a006f6e3ddd7 350 SMART SM01133 68 326 1.5E-41 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS22120 e13fa8657f02c68beac0a006f6e3ddd7 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 6.0E-74 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CKQ55_RS22120 e13fa8657f02c68beac0a006f6e3ddd7 350 Gene3D G3DSA:3.20.20.70 52 344 1.1E-65 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22120 e13fa8657f02c68beac0a006f6e3ddd7 350 SUPERFAMILY SSF51569 56 242 7.69E-65 T 29-03-2018 CKQ55_RS22120 e13fa8657f02c68beac0a006f6e3ddd7 350 SUPERFAMILY SSF51569 270 344 7.69E-65 T 29-03-2018 CKQ55_RS05485 554edaa30d964e6cd179912964398c30 182 Pfam PF04233 Phage Mu protein F like protein 66 171 1.8E-12 T 29-03-2018 IPR006528 Phage head morphogenesis domain CKQ55_RS06445 fb2953271028641e3ee8b651d61b5a78 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 51.93 T 29-03-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CKQ55_RS06445 fb2953271028641e3ee8b651d61b5a78 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 186 1.1E-30 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CKQ55_RS06445 fb2953271028641e3ee8b651d61b5a78 193 PIRSF PIRSF011489 1 193 3.6E-82 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CKQ55_RS01265 7f110b437a1c985dc6fefbc44416baaa 233 Gene3D G3DSA:2.40.160.40 21 233 1.7E-33 T 29-03-2018 CKQ55_RS01265 7f110b437a1c985dc6fefbc44416baaa 233 SUPERFAMILY SSF56935 52 233 1.71E-7 T 29-03-2018 CKQ55_RS01265 7f110b437a1c985dc6fefbc44416baaa 233 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 233 1.4E-75 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin CKQ55_RS28795 b4786efe512af124026a2459bbe84d00 378 Gene3D G3DSA:3.40.50.1820 36 377 2.8E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS28795 b4786efe512af124026a2459bbe84d00 378 Pfam PF12697 Alpha/beta hydrolase family 108 358 7.2E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS28795 b4786efe512af124026a2459bbe84d00 378 SUPERFAMILY SSF53474 305 377 2.42E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS28795 b4786efe512af124026a2459bbe84d00 378 SUPERFAMILY SSF53474 16 199 2.42E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS25755 ac696b120f4b31f0dd39232c87608d27 71 Gene3D G3DSA:1.20.1280.40 1 70 1.9E-28 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS25755 ac696b120f4b31f0dd39232c87608d27 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 3.3E-27 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS25755 ac696b120f4b31f0dd39232c87608d27 71 SUPERFAMILY SSF68989 1 71 4.84E-22 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS25295 394e5af8d50049e1c4a2b40125283d2a 92 Pfam PF05488 PAAR motif 9 82 4.2E-8 T 29-03-2018 IPR008727 PAAR motif CKQ55_RS04505 31c6a569679f4f048cd8b6f8e0ee5323 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 28 268 7.1E-39 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS04505 31c6a569679f4f048cd8b6f8e0ee5323 276 SUPERFAMILY SSF52518 7 273 6.33E-74 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS04505 31c6a569679f4f048cd8b6f8e0ee5323 276 Gene3D G3DSA:3.40.50.970 4 276 2.7E-61 T 29-03-2018 CKQ55_RS20650 61de6fb566934681fca4a34d9f9b283e 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.584 T 29-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CKQ55_RS20650 61de6fb566934681fca4a34d9f9b283e 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 3.3E-40 T 29-03-2018 CKQ55_RS05270 18b01d4e3dc405e651cf8c92ea9a8ef6 285 Pfam PF01936 NYN domain 158 208 1.2E-9 T 29-03-2018 IPR021139 NYN domain, limkain-b1-type CKQ55_RS05270 18b01d4e3dc405e651cf8c92ea9a8ef6 285 Gene3D G3DSA:3.40.50.1010 1 232 1.6E-25 T 29-03-2018 IPR029060 PIN domain-like CKQ55_RS04635 bd12c6a3181d224639b0871a412412f8 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 102 7.6E-29 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS04635 bd12c6a3181d224639b0871a412412f8 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 208 4.1E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04635 bd12c6a3181d224639b0871a412412f8 213 Gene3D G3DSA:1.10.3720.10 2 211 4.3E-36 T 29-03-2018 CKQ55_RS04635 bd12c6a3181d224639b0871a412412f8 213 SUPERFAMILY SSF161098 6 194 5.89E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29215 65f57274edd8cbd1ce4d93d18117a487 232 SUPERFAMILY SSF161098 31 219 5.1E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29215 65f57274edd8cbd1ce4d93d18117a487 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 57 224 1.1E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29215 65f57274edd8cbd1ce4d93d18117a487 232 Gene3D G3DSA:1.10.3720.10 1 232 1.3E-32 T 29-03-2018 CKQ55_RS07170 e50beb93d0c1ac8318cd65b22701bc46 702 Gene3D G3DSA:2.170.130.10 27 169 1.1E-28 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS07170 e50beb93d0c1ac8318cd65b22701bc46 702 Gene3D G3DSA:2.40.170.20 175 702 5.0E-90 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS07170 e50beb93d0c1ac8318cd65b22701bc46 702 Pfam PF00593 TonB dependent receptor 263 701 3.2E-66 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS07170 e50beb93d0c1ac8318cd65b22701bc46 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 702 7.8E-138 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS07170 e50beb93d0c1ac8318cd65b22701bc46 702 SUPERFAMILY SSF56935 29 702 1.41E-150 T 29-03-2018 CKQ55_RS07170 e50beb93d0c1ac8318cd65b22701bc46 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 162 2.3E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS08525 a4150e63a5f348d472e3fad815a8ca71 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 69.357 T 29-03-2018 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 CKQ55_RS08525 a4150e63a5f348d472e3fad815a8ca71 304 Gene3D G3DSA:3.90.245.10 1 303 5.4E-98 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CKQ55_RS08525 a4150e63a5f348d472e3fad815a8ca71 304 SUPERFAMILY SSF53590 3 299 1.11E-93 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CKQ55_RS08525 a4150e63a5f348d472e3fad815a8ca71 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 5.1E-81 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CKQ55_RS08100 99d6c2b8a2151aff8c9d8fd1b2974921 166 PIRSF PIRSF004572 1 166 1.7E-76 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 CKQ55_RS08100 99d6c2b8a2151aff8c9d8fd1b2974921 166 Hamap MF_01332 Secretion monitor [secM]. 1 166 38.089 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 CKQ55_RS08100 99d6c2b8a2151aff8c9d8fd1b2974921 166 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 166 2.0E-54 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 CKQ55_RS08100 99d6c2b8a2151aff8c9d8fd1b2974921 166 Pfam PF06558 Secretion monitor precursor protein (SecM) 21 163 1.0E-54 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 CKQ55_RS13905 f5bf6052ea00db58abf0a68eca9650b6 202 Gene3D G3DSA:1.20.1050.10 90 201 3.9E-12 T 29-03-2018 CKQ55_RS13905 f5bf6052ea00db58abf0a68eca9650b6 202 SUPERFAMILY SSF47616 76 199 1.1E-12 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS13905 f5bf6052ea00db58abf0a68eca9650b6 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 191 4.0E-6 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS13905 f5bf6052ea00db58abf0a68eca9650b6 202 Gene3D G3DSA:3.40.30.10 1 89 3.8E-17 T 29-03-2018 CKQ55_RS13905 f5bf6052ea00db58abf0a68eca9650b6 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 7.6E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS13905 f5bf6052ea00db58abf0a68eca9650b6 202 SUPERFAMILY SSF52833 1 100 4.66E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 Pfam PF00107 Zinc-binding dehydrogenase 185 316 1.1E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 Gene3D G3DSA:3.90.180.10 1 168 9.7E-37 T 29-03-2018 CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 Gene3D G3DSA:3.40.50.10730 169 317 6.0E-25 T 29-03-2018 CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 SUPERFAMILY SSF51735 147 320 1.32E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.1E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 SUPERFAMILY SSF50129 3 184 6.85E-38 T 29-03-2018 IPR011032 GroES-like CKQ55_RS29860 2e1364428917d7ba97dc673a01efa4f3 358 SMART SM00829 9 352 0.0014 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS04185 2ca4d7ca2fa4dc743c70a7e8df43e4d3 262 Pfam PF00795 Carbon-nitrogen hydrolase 2 245 4.3E-38 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS04185 2ca4d7ca2fa4dc743c70a7e8df43e4d3 262 Gene3D G3DSA:3.60.110.10 1 257 1.4E-59 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS04185 2ca4d7ca2fa4dc743c70a7e8df43e4d3 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CKQ55_RS04185 2ca4d7ca2fa4dc743c70a7e8df43e4d3 262 SUPERFAMILY SSF56317 1 254 1.57E-59 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS11865 755fcdf04e5a76169d0f98861b8b792c 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 1.9E-9 T 29-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site CKQ55_RS00855 7f6b409d7d4334ece1862a71ca75e0f6 194 Gene3D G3DSA:3.40.630.30 9 192 1.1E-29 T 29-03-2018 CKQ55_RS00855 7f6b409d7d4334ece1862a71ca75e0f6 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 2.8E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS00855 7f6b409d7d4334ece1862a71ca75e0f6 194 SUPERFAMILY SSF55729 12 185 1.52E-41 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 SUPERFAMILY SSF52402 20 208 5.33E-54 T 29-03-2018 CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 3.8E-102 T 29-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 Gene3D G3DSA:3.40.50.620 2 216 2.2E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.251 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 3.1E-95 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 3.1E-52 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CKQ55_RS18640 7759cab8c7250acfa8376a27a4ba62ba 244 PIRSF PIRSF000857 7 244 9.1E-56 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CKQ55_RS28910 91f13bd3bff258a2551861fd95d305b7 484 SUPERFAMILY SSF103473 22 179 2.09E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28910 91f13bd3bff258a2551861fd95d305b7 484 SUPERFAMILY SSF103473 213 472 2.09E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28910 91f13bd3bff258a2551861fd95d305b7 484 Gene3D G3DSA:1.20.1250.20 253 476 1.4E-12 T 29-03-2018 CKQ55_RS28910 91f13bd3bff258a2551861fd95d305b7 484 Pfam PF13347 MFS/sugar transport protein 23 469 1.3E-83 T 29-03-2018 CKQ55_RS28910 91f13bd3bff258a2551861fd95d305b7 484 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 21 480 6.3E-89 T 29-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CKQ55_RS28910 91f13bd3bff258a2551861fd95d305b7 484 Gene3D G3DSA:1.20.1250.20 22 252 1.6E-12 T 29-03-2018 CKQ55_RS31470 41b715e3adfff39ece29a4939c02138e 325 Pfam PF01051 Initiator Replication protein 10 265 3.6E-30 T 29-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CKQ55_RS31470 41b715e3adfff39ece29a4939c02138e 325 Gene3D G3DSA:1.10.10.10 184 270 0.0019 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS31470 41b715e3adfff39ece29a4939c02138e 325 Gene3D G3DSA:1.10.10.10 39 183 1.4E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 Pfam PF13602 Zinc-binding dehydrogenase 187 330 1.1E-31 T 29-03-2018 CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 SMART SM00829 10 330 3.8E-40 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 SUPERFAMILY SSF51735 117 298 5.65E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 Gene3D G3DSA:3.90.180.10 252 334 3.2E-9 T 29-03-2018 CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 SUPERFAMILY SSF50129 1 150 4.57E-36 T 29-03-2018 IPR011032 GroES-like CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 Gene3D G3DSA:3.90.180.10 1 142 3.0E-39 T 29-03-2018 CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 2.9E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CKQ55_RS01640 ec71f878aa5c30cccbe8d361a6cf8f94 335 Gene3D G3DSA:3.40.50.720 143 246 3.9E-23 T 29-03-2018 CKQ55_RS25385 99db4d6f00c840805cb26f4a32d05661 333 SUPERFAMILY SSF49401 201 333 8.45E-21 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS25385 99db4d6f00c840805cb26f4a32d05661 333 Gene3D G3DSA:2.60.40.1090 202 333 5.5E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS25385 99db4d6f00c840805cb26f4a32d05661 333 Gene3D G3DSA:2.60.40.1090 42 168 0.0011 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PIRSF PIRSF019574 1 348 6.4E-135 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 Gene3D G3DSA:3.40.190.10 191 314 3.1E-19 T 29-03-2018 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 Gene3D G3DSA:3.40.190.10 19 190 3.0E-30 T 29-03-2018 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 1.0E-95 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 Pfam PF13343 Bacterial extracellular solute-binding protein 77 320 9.9E-39 T 29-03-2018 CKQ55_RS00575 619582ad4feed77a2c81bb560947e0d2 348 SUPERFAMILY SSF53850 27 345 6.42E-95 T 29-03-2018 CKQ55_RS00755 9206ea540186f2e6f4e0bfaf126882a7 340 Gene3D G3DSA:3.30.160.60 303 337 2.5E-14 T 29-03-2018 CKQ55_RS00755 9206ea540186f2e6f4e0bfaf126882a7 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 2.5E-146 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CKQ55_RS00755 9206ea540186f2e6f4e0bfaf126882a7 340 Gene3D G3DSA:3.30.160.60 74 108 1.3E-18 T 29-03-2018 CKQ55_RS00755 9206ea540186f2e6f4e0bfaf126882a7 340 Pfam PF02618 YceG-like family 43 328 7.6E-79 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CKQ55_RS00755 9206ea540186f2e6f4e0bfaf126882a7 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 332 32.663 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 SMART SM00839 190 420 8.7E-86 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 Gene3D G3DSA:3.40.50.10860 40 174 4.9E-52 T 29-03-2018 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 Gene3D G3DSA:3.40.50.720 188 423 1.8E-73 T 29-03-2018 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 SUPERFAMILY SSF51735 188 422 4.16E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 SUPERFAMILY SSF53223 12 190 7.04E-65 T 29-03-2018 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 42 170 1.3E-54 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 188 420 1.2E-71 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 221 241 7.9E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 99 113 7.9E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 201 7.9E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 7.9E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 107 120 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29185 962cfc2fdf0ea0fe96f1b2de56704aae 423 PIRSF PIRSF000185 11 423 1.5E-156 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CKQ55_RS04740 7ce47d30cc47e0a776fccbb288d5f83d 714 Pfam PF00593 TonB dependent receptor 248 712 4.3E-60 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04740 7ce47d30cc47e0a776fccbb288d5f83d 714 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 712 9.4E-130 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS04740 7ce47d30cc47e0a776fccbb288d5f83d 714 SUPERFAMILY SSF56935 26 714 1.12E-134 T 29-03-2018 CKQ55_RS04740 7ce47d30cc47e0a776fccbb288d5f83d 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 164 5.5E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04740 7ce47d30cc47e0a776fccbb288d5f83d 714 Gene3D G3DSA:2.170.130.10 26 177 3.6E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS04740 7ce47d30cc47e0a776fccbb288d5f83d 714 Gene3D G3DSA:2.40.170.20 178 714 5.3E-81 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 Gene3D G3DSA:1.20.1250.20 203 408 2.2E-30 T 29-03-2018 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 48.444 T 29-03-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 SUPERFAMILY SSF103473 215 404 2.09E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 Pfam PF07690 Major Facilitator Superfamily 18 261 4.3E-35 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 PRINTS PR01035 Tetracycline resistance protein signature 142 164 4.0E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 PRINTS PR01035 Tetracycline resistance protein signature 346 369 4.0E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 PRINTS PR01035 Tetracycline resistance protein signature 85 109 4.0E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 PRINTS PR01035 Tetracycline resistance protein signature 23 39 4.0E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 PRINTS PR01035 Tetracycline resistance protein signature 112 133 4.0E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 PRINTS PR01035 Tetracycline resistance protein signature 311 331 4.0E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 SUPERFAMILY SSF103473 9 226 3.14E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS00915 eca9a8374666365f441ff9ce2c7cbd7b 416 Gene3D G3DSA:1.20.1250.20 9 202 1.9E-37 T 29-03-2018 CKQ55_RS19205 5e3b73199fe555df1fd8d3c5140e41a5 325 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 232 324 6.1E-43 T 29-03-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS19205 5e3b73199fe555df1fd8d3c5140e41a5 325 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 325 1.2E-184 T 29-03-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS19205 5e3b73199fe555df1fd8d3c5140e41a5 325 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 177 3.2E-71 T 29-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CKQ55_RS04750 fdfb3be343d6df5345d5ce0b5d2433e0 366 Pfam PF12706 Beta-lactamase superfamily domain 120 314 1.0E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS04750 fdfb3be343d6df5345d5ce0b5d2433e0 366 SUPERFAMILY SSF56281 206 351 9.7E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS04750 fdfb3be343d6df5345d5ce0b5d2433e0 366 SUPERFAMILY SSF56281 105 179 9.7E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS04750 fdfb3be343d6df5345d5ce0b5d2433e0 366 Gene3D G3DSA:3.60.15.10 74 366 2.0E-45 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS04750 fdfb3be343d6df5345d5ce0b5d2433e0 366 SMART SM00849 108 314 9.0E-5 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS04750 fdfb3be343d6df5345d5ce0b5d2433e0 366 PIRSF PIRSF038896 14 351 7.0E-89 T 29-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CKQ55_RS27830 d8ef8ddfc1868590dbcba79c88305762 75 Pfam PF01361 Tautomerase enzyme 2 54 6.4E-15 T 29-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CKQ55_RS27830 d8ef8ddfc1868590dbcba79c88305762 75 Gene3D G3DSA:3.30.429.10 2 65 2.6E-18 T 29-03-2018 CKQ55_RS27830 d8ef8ddfc1868590dbcba79c88305762 75 SUPERFAMILY SSF55331 2 74 1.97E-19 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CKQ55_RS27830 d8ef8ddfc1868590dbcba79c88305762 75 Hamap MF_00718 Tautomerase PptA [pptA]. 1 75 29.691 T 29-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 CKQ55_RS27830 d8ef8ddfc1868590dbcba79c88305762 75 PIRSF PIRSF037799 1 75 3.1E-31 T 29-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 336 1.1E-137 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 SUPERFAMILY SSF56042 163 331 4.78E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 PIRSF PIRSF005644 1 336 6.5E-122 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 Gene3D G3DSA:3.30.1330.10 1 156 9.1E-24 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 153 1.9E-16 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 312 5.3E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 SUPERFAMILY SSF55326 3 156 3.29E-34 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CKQ55_RS19060 b5be7d5bfc76743a3b020232fb373c28 336 Gene3D G3DSA:3.90.650.10 161 322 1.8E-35 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CKQ55_RS12340 143aba6feb383bb0695df2bff98b9919 224 Pfam PF03475 3-alpha domain 169 212 3.6E-12 T 29-03-2018 IPR005163 3-alpha domain CKQ55_RS12340 143aba6feb383bb0695df2bff98b9919 224 SUPERFAMILY SSF50800 2 223 1.36E-75 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CKQ55_RS12340 143aba6feb383bb0695df2bff98b9919 224 Gene3D G3DSA:2.40.33.20 1 224 9.9E-50 T 29-03-2018 CKQ55_RS12340 143aba6feb383bb0695df2bff98b9919 224 Pfam PF03473 MOSC domain 47 157 1.9E-22 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CKQ55_RS29055 fe8432b1b8e9c5559dbbfacb232f59d3 280 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS29055 fe8432b1b8e9c5559dbbfacb232f59d3 280 Gene3D G3DSA:3.40.50.300 6 249 4.1E-59 T 29-03-2018 CKQ55_RS29055 fe8432b1b8e9c5559dbbfacb232f59d3 280 Pfam PF00005 ABC transporter 31 172 8.0E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29055 fe8432b1b8e9c5559dbbfacb232f59d3 280 SMART SM00382 39 220 6.0E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29055 fe8432b1b8e9c5559dbbfacb232f59d3 280 SUPERFAMILY SSF52540 11 224 1.27E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS29635 05a3130b78a1dee29659dfafb1e8199f 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 38.718 T 29-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 CKQ55_RS29635 05a3130b78a1dee29659dfafb1e8199f 252 Gene3D G3DSA:3.20.20.370 1 252 2.7E-76 T 29-03-2018 CKQ55_RS29635 05a3130b78a1dee29659dfafb1e8199f 252 Pfam PF04794 YdjC-like protein 5 240 8.8E-56 T 29-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like CKQ55_RS29635 05a3130b78a1dee29659dfafb1e8199f 252 SUPERFAMILY SSF88713 1 252 7.78E-72 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 Gene3D G3DSA:3.40.50.2300 56 172 1.4E-25 T 29-03-2018 CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 SUPERFAMILY SSF53822 63 316 8.25E-48 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 331 4.2E-27 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 SMART SM00354 3 73 1.9E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 8.4E-12 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 Gene3D G3DSA:3.40.50.2300 173 338 1.3E-36 T 29-03-2018 CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 Gene3D G3DSA:1.10.260.40 4 55 9.7E-20 T 29-03-2018 CKQ55_RS26845 e6d3adbb669918de672c4a052c6b9454 339 SUPERFAMILY SSF47413 2 59 3.7E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS03820 f503dc27b99ef000a3d9c40e8086d1b2 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 2.0E-5 T 29-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 CKQ55_RS03820 f503dc27b99ef000a3d9c40e8086d1b2 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 2.3E-7 T 29-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 SUPERFAMILY SSF51445 3 456 2.71E-132 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 Pfam PF00232 Glycosyl hydrolase family 1 2 455 2.2E-117 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 Gene3D G3DSA:3.20.20.80 2 458 1.7E-123 T 29-03-2018 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 385 1.4E-12 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 353 361 1.4E-12 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 413 1.4E-12 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 285 299 1.4E-12 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS03075 78af5a530caa8fdf29eb3f3b74efc559 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 420 432 1.4E-12 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS30315 404cf8305caa6f5e6920537bb81800fd 398 SUPERFAMILY SSF101936 6 168 4.32E-56 T 29-03-2018 IPR015300 DNA-binding pseudobarrel domain CKQ55_RS30315 404cf8305caa6f5e6920537bb81800fd 398 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 11 158 5.6E-64 T 29-03-2018 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal CKQ55_RS30315 404cf8305caa6f5e6920537bb81800fd 398 Pfam PF09019 EcoRII C terminal 223 387 3.8E-74 T 29-03-2018 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal GO:0003677|GO:0009036|GO:0009307 CKQ55_RS30315 404cf8305caa6f5e6920537bb81800fd 398 SUPERFAMILY SSF52980 174 391 1.02E-81 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS30315 404cf8305caa6f5e6920537bb81800fd 398 Gene3D G3DSA:2.40.330.10 5 171 4.3E-32 T 29-03-2018 IPR015300 DNA-binding pseudobarrel domain CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 1 79 9.1E-16 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12910 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS21475 e6ce780ac74118854e4fc6df09736234 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 5.7E-132 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CKQ55_RS21475 e6ce780ac74118854e4fc6df09736234 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 2.7E-125 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CKQ55_RS08410 cf5922b01274c8b518a6a77389e4674f 77 Gene3D G3DSA:2.30.30.100 23 75 1.8E-24 T 29-03-2018 CKQ55_RS08410 cf5922b01274c8b518a6a77389e4674f 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 28 74 1.1E-18 T 29-03-2018 IPR010305 Protein of unknown function DUF903 CKQ55_RS08410 cf5922b01274c8b518a6a77389e4674f 77 SUPERFAMILY SSF50182 23 75 9.81E-15 T 29-03-2018 IPR010920 LSM domain CKQ55_RS06840 a6908e90de8e7e2282c23d41679e803c 290 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 285 4.8E-85 T 29-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CKQ55_RS06840 a6908e90de8e7e2282c23d41679e803c 290 Gene3D G3DSA:1.10.3720.10 14 280 2.2E-24 T 29-03-2018 CKQ55_RS06840 a6908e90de8e7e2282c23d41679e803c 290 SUPERFAMILY SSF161098 91 279 1.31E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06840 a6908e90de8e7e2282c23d41679e803c 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 284 6.8E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS12060 60364defff6f81e74399345a4fd65060 93 Pfam PF13616 PPIC-type PPIASE domain 14 91 1.2E-20 T 29-03-2018 CKQ55_RS12060 60364defff6f81e74399345a4fd65060 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CKQ55_RS12060 60364defff6f81e74399345a4fd65060 93 Gene3D G3DSA:3.10.50.40 1 93 4.5E-30 T 29-03-2018 CKQ55_RS12060 60364defff6f81e74399345a4fd65060 93 SUPERFAMILY SSF54534 5 90 4.58E-28 T 29-03-2018 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 SUPERFAMILY SSF103473 7 392 7.06E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 Pfam PF07690 Major Facilitator Superfamily 9 350 7.5E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 101 122 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 74 98 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 246 266 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 334 357 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 274 295 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 43 62 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 364 383 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 299 319 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 131 153 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 159 179 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 217 234 1.2E-144 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 Gene3D G3DSA:1.20.1250.20 5 193 3.6E-32 T 29-03-2018 CKQ55_RS28890 42c8f14ce0bd31d77426ff2063960760 401 Gene3D G3DSA:1.20.1250.20 204 401 9.1E-16 T 29-03-2018 CKQ55_RS06375 52dabb72ddc0dbcf6d1db6e70d73cae8 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 4.6E-56 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS06375 52dabb72ddc0dbcf6d1db6e70d73cae8 156 SUPERFAMILY SSF52121 4 154 2.62E-59 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS06375 52dabb72ddc0dbcf6d1db6e70d73cae8 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 4.4E-60 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS06375 52dabb72ddc0dbcf6d1db6e70d73cae8 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.743 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS06375 52dabb72ddc0dbcf6d1db6e70d73cae8 156 Gene3D G3DSA:3.40.50.960 1 155 2.3E-65 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CKQ55_RS29835 42405af3d5bd9864e4d64911290885b6 327 Pfam PF00248 Aldo/keto reductase family 15 318 2.7E-61 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS29835 42405af3d5bd9864e4d64911290885b6 327 PRINTS PR00069 Aldo-keto reductase signature 120 138 6.5E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29835 42405af3d5bd9864e4d64911290885b6 327 PRINTS PR00069 Aldo-keto reductase signature 154 171 6.5E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29835 42405af3d5bd9864e4d64911290885b6 327 PRINTS PR00069 Aldo-keto reductase signature 188 217 6.5E-8 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CKQ55_RS29835 42405af3d5bd9864e4d64911290885b6 327 Gene3D G3DSA:3.20.20.100 1 327 2.9E-84 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS29835 42405af3d5bd9864e4d64911290885b6 327 SUPERFAMILY SSF51430 1 318 4.19E-83 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS09010 08bee707b288c7234e1add496f4d6746 278 SUPERFAMILY SSF55729 1 136 2.7E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS09010 08bee707b288c7234e1add496f4d6746 278 Pfam PF00583 Acetyltransferase (GNAT) family 51 130 1.5E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS09010 08bee707b288c7234e1add496f4d6746 278 Gene3D G3DSA:3.40.630.30 4 143 5.4E-25 T 29-03-2018 CKQ55_RS09010 08bee707b288c7234e1add496f4d6746 278 Gene3D G3DSA:3.40.630.30 144 263 8.2E-7 T 29-03-2018 CKQ55_RS09010 08bee707b288c7234e1add496f4d6746 278 SUPERFAMILY SSF55729 195 260 2.45E-7 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 4.1E-50 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 4.1E-50 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 4.1E-50 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 4.1E-50 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 4.1E-50 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 Pfam PF00293 NUDIX domain 5 141 1.0E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 Gene3D G3DSA:3.90.79.10 2 147 4.7E-28 T 29-03-2018 CKQ55_RS23665 b05a01b1f7897b4176feffc300015e8c 147 SUPERFAMILY SSF55811 3 140 3.79E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS04695 e32713ee13d15b891ea1fcb8be71e1a2 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 315 3.1E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04695 e32713ee13d15b891ea1fcb8be71e1a2 317 Gene3D G3DSA:1.10.3720.10 2 304 1.4E-39 T 29-03-2018 CKQ55_RS04695 e32713ee13d15b891ea1fcb8be71e1a2 317 SUPERFAMILY SSF161098 91 298 5.72E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS18500 10bd04fa4dbf21e24511ef095dcaf7c6 468 PIRSF PIRSF000337 4 450 5.7E-148 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CKQ55_RS18500 10bd04fa4dbf21e24511ef095dcaf7c6 468 Pfam PF00296 Luciferase-like monooxygenase 35 391 6.8E-53 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS18500 10bd04fa4dbf21e24511ef095dcaf7c6 468 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 436 4.2E-173 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CKQ55_RS18500 10bd04fa4dbf21e24511ef095dcaf7c6 468 Gene3D G3DSA:3.20.20.30 3 460 2.6E-113 T 29-03-2018 CKQ55_RS18500 10bd04fa4dbf21e24511ef095dcaf7c6 468 SUPERFAMILY SSF51679 4 442 1.26E-129 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS11825 8632130bf60fe9222011e3657ae3351e 154 Pfam PF03061 Thioesterase superfamily 56 144 6.6E-19 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CKQ55_RS11825 8632130bf60fe9222011e3657ae3351e 154 Gene3D G3DSA:3.10.129.10 6 153 5.6E-29 T 29-03-2018 CKQ55_RS11825 8632130bf60fe9222011e3657ae3351e 154 SUPERFAMILY SSF54637 8 153 6.5E-26 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS11825 8632130bf60fe9222011e3657ae3351e 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 152 1.1E-14 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CKQ55_RS09420 a963219d61714f1ed706c3af2005958c 374 Gene3D G3DSA:3.40.1710.10 41 191 7.4E-20 T 29-03-2018 CKQ55_RS09420 a963219d61714f1ed706c3af2005958c 374 Pfam PF12698 ABC-2 family transporter protein 28 363 2.5E-32 T 29-03-2018 CKQ55_RS31170 3d7da628694a5abf121c2227c4a09a29 184 SUPERFAMILY SSF52833 73 172 6.81E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS31170 3d7da628694a5abf121c2227c4a09a29 184 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 4 175 3.1E-62 T 29-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB CKQ55_RS31170 3d7da628694a5abf121c2227c4a09a29 184 Pfam PF13728 F plasmid transfer operon protein 75 162 1.8E-10 T 29-03-2018 CKQ55_RS31170 3d7da628694a5abf121c2227c4a09a29 184 Gene3D G3DSA:3.40.30.10 51 178 3.0E-7 T 29-03-2018 CKQ55_RS30125 d916f74870c33e86d50791dafdbd777a 231 Gene3D G3DSA:2.160.20.10 21 226 6.5E-4 T 29-03-2018 IPR012334 Pectin lyase fold CKQ55_RS20240 056d0a9bd8fc2bb51ee69e0eeb918985 71 Pfam PF07191 zinc-ribbons 4 68 1.6E-27 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 CKQ55_RS20240 056d0a9bd8fc2bb51ee69e0eeb918985 71 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 69 3.0E-23 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 CKQ55_RS20240 056d0a9bd8fc2bb51ee69e0eeb918985 71 Gene3D G3DSA:2.20.25.10 33 67 0.35 T 29-03-2018 CKQ55_RS20240 056d0a9bd8fc2bb51ee69e0eeb918985 71 Gene3D G3DSA:2.20.25.10 4 32 0.0059 T 29-03-2018 CKQ55_RS20240 056d0a9bd8fc2bb51ee69e0eeb918985 71 SUPERFAMILY SSF161187 1 69 7.72E-28 T 29-03-2018 IPR029037 YfgJ-like CKQ55_RS29000 b64b0235a7045fb24efa1011b6f83d1e 511 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 55 507 1.2E-199 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ55_RS29000 b64b0235a7045fb24efa1011b6f83d1e 511 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 87 507 9.6E-167 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ55_RS29000 b64b0235a7045fb24efa1011b6f83d1e 511 Gene3D G3DSA:3.90.210.10 265 370 0.044 T 29-03-2018 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 Gene3D G3DSA:3.30.70.20 198 236 1.6E-19 T 29-03-2018 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 1.8E-29 T 29-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 0.0 T 29-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 Gene3D G3DSA:3.30.70.20 5 197 1.8E-28 T 29-03-2018 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 Pfam PF13247 4Fe-4S dicluster domain 175 271 2.0E-37 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS24530 15e512d916d888117335ff7325621965 511 Gene3D G3DSA:3.30.70.20 237 364 6.3E-31 T 29-03-2018 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 Gene3D G3DSA:3.30.70.20 365 466 1.3E-30 T 29-03-2018 CKQ55_RS24530 15e512d916d888117335ff7325621965 511 SUPERFAMILY SSF54862 1 503 1.57E-183 T 29-03-2018 CKQ55_RS17855 d6ff32489ee06dce0a7db168180e294c 216 Gene3D G3DSA:2.60.40.1090 38 216 8.1E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17855 d6ff32489ee06dce0a7db168180e294c 216 SUPERFAMILY SSF49401 40 216 6.96E-16 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS27110 4d112ce52881d43b99eaef477bcf9b08 365 Gene3D G3DSA:3.30.360.10 142 284 3.0E-44 T 29-03-2018 CKQ55_RS27110 4d112ce52881d43b99eaef477bcf9b08 365 SUPERFAMILY SSF51735 9 141 1.28E-14 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27110 4d112ce52881d43b99eaef477bcf9b08 365 Gene3D G3DSA:3.40.50.720 2 141 1.1E-17 T 29-03-2018 CKQ55_RS27110 4d112ce52881d43b99eaef477bcf9b08 365 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 7 347 1.2E-142 T 29-03-2018 IPR010091 Thiazolinyl imide reductase CKQ55_RS27110 4d112ce52881d43b99eaef477bcf9b08 365 PIRSF PIRSF017494 4 363 2.5E-143 T 29-03-2018 IPR010091 Thiazolinyl imide reductase CKQ55_RS27110 4d112ce52881d43b99eaef477bcf9b08 365 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 5.5E-24 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS21200 4d6ba3a7eb514daf786bee5166b180f2 343 Pfam PF00419 Fimbrial protein 197 342 4.7E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS21200 4d6ba3a7eb514daf786bee5166b180f2 343 SUPERFAMILY SSF49401 205 340 2.68E-10 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS21200 4d6ba3a7eb514daf786bee5166b180f2 343 Gene3D G3DSA:2.60.40.1090 194 341 7.2E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS31400 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31400 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31400 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31400 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 30 270 2.1E-34 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS07265 03d40560918dd8037b4e988843e50b28 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.343 T 29-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CKQ55_RS07265 03d40560918dd8037b4e988843e50b28 152 SUPERFAMILY SSF53271 4 144 9.7E-32 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CKQ55_RS07265 03d40560918dd8037b4e988843e50b28 152 Gene3D G3DSA:3.40.50.2020 1 152 3.0E-26 T 29-03-2018 CKQ55_RS07265 03d40560918dd8037b4e988843e50b28 152 Pfam PF00156 Phosphoribosyl transferase domain 15 144 8.9E-15 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CKQ55_RS06475 66ad06c6c4a5bc6eb4fe4e01da4c6e51 213 Pfam PF00857 Isochorismatase family 12 165 3.4E-24 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS06475 66ad06c6c4a5bc6eb4fe4e01da4c6e51 213 Gene3D G3DSA:3.40.50.850 2 208 4.6E-35 T 29-03-2018 CKQ55_RS06475 66ad06c6c4a5bc6eb4fe4e01da4c6e51 213 SUPERFAMILY SSF52499 3 204 1.44E-49 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS11225 063ce2c8a40f011c79db3bd7a5f967bf 425 PIRSF PIRSF006054 1 425 2.7E-145 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CKQ55_RS11225 063ce2c8a40f011c79db3bd7a5f967bf 425 Gene3D G3DSA:1.10.4100.10 258 388 9.8E-8 T 29-03-2018 CKQ55_RS11225 063ce2c8a40f011c79db3bd7a5f967bf 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 5 424 33.17 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CKQ55_RS11225 063ce2c8a40f011c79db3bd7a5f967bf 425 Pfam PF03313 Serine dehydratase alpha chain 176 419 1.8E-45 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CKQ55_RS03910 995942abaaf7f5cd93afc107c09d13aa 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 2.8E-9 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CKQ55_RS03910 995942abaaf7f5cd93afc107c09d13aa 97 SUPERFAMILY SSF47598 51 86 9.34E-5 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS03910 995942abaaf7f5cd93afc107c09d13aa 97 Gene3D G3DSA:1.10.1220.10 21 96 8.8E-7 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS18240 f3df44ff80eeef51b6cdb55647fa438d 125 Gene3D G3DSA:3.40.50.10150 5 115 9.3E-45 T 29-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CKQ55_RS18240 f3df44ff80eeef51b6cdb55647fa438d 125 SUPERFAMILY SSF52968 4 115 2.75E-39 T 29-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CKQ55_RS18240 f3df44ff80eeef51b6cdb55647fa438d 125 PIRSF PIRSF011503 1 114 1.0E-50 T 29-03-2018 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit CKQ55_RS18240 f3df44ff80eeef51b6cdb55647fa438d 125 Pfam PF02288 Dehydratase medium subunit 7 111 4.6E-33 T 29-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CKQ55_RS28630 9ed8d800ab6cef4c0680d346dfb83eac 90 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 88 1.2E-23 T 29-03-2018 IPR008473 Putative 3TM holin, Phage holin 3 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.9E-109 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Gene3D G3DSA:3.30.70.1440 673 769 2.1E-20 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82714 723 809 9.16E-24 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82693 566 672 1.62E-30 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Gene3D G3DSA:3.30.2090.10 180 273 1.9E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Gene3D G3DSA:3.30.70.1430 38 141 1.8E-28 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82866 296 497 6.02E-48 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82693 39 132 8.89E-27 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82693 138 182 4.97E-23 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82693 274 330 4.97E-23 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Gene3D G3DSA:1.20.1640.10 822 1030 1.3E-36 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Gene3D G3DSA:1.20.1640.10 274 500 6.1E-44 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82866 807 1030 5.75E-45 T 29-03-2018 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 SUPERFAMILY SSF82714 182 272 8.11E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CKQ55_RS20430 a245b95965947b20a5ac2ee8c67ef020 1037 Gene3D G3DSA:3.30.70.1430 568 672 2.2E-25 T 29-03-2018 CKQ55_RS22235 862eb756f1af0e490ca17b6e8540ae92 71 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 10 65 0.003 T 29-03-2018 IPR020126 Protein of unknown function DUF2732 CKQ55_RS22235 862eb756f1af0e490ca17b6e8540ae92 71 Pfam PF10809 Protein of unknown function (DUF2732) 11 67 3.2E-14 T 29-03-2018 IPR020126 Protein of unknown function DUF2732 CKQ55_RS13060 41739facbcceae45473d6073fec16733 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.7E-26 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13060 41739facbcceae45473d6073fec16733 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS13060 41739facbcceae45473d6073fec16733 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13060 41739facbcceae45473d6073fec16733 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.594 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13060 41739facbcceae45473d6073fec16733 46 Pfam PF00468 Ribosomal protein L34 1 44 2.9E-23 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 PIRSF PIRSF001359 13 359 1.0E-104 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 SUPERFAMILY SSF51569 4 357 5.86E-132 T 29-03-2018 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 5.9E-192 T 29-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 2.6E-89 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 9.3E-117 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CKQ55_RS17255 f6787885bd3a37225bf2c5acececb966 359 Gene3D G3DSA:3.20.20.70 4 358 8.1E-101 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS28200 5df1b4b72017cfb6505ebc78b8ffd9cb 67 Pfam PF14001 YdfZ protein 3 65 7.5E-32 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CKQ55_RS28200 5df1b4b72017cfb6505ebc78b8ffd9cb 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 8.0E-31 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 Gene3D G3DSA:3.20.20.70 1 321 2.8E-137 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 2.4E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 2.4E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 2.4E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 2.4E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 2.4E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 2.4E-55 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 3.5E-134 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 SMART SM01004 3 321 8.7E-210 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 SUPERFAMILY SSF51569 4 319 1.61E-129 T 29-03-2018 CKQ55_RS06645 d237ea50306136b3f5a85203cd256973 324 PIRSF PIRSF001415 1 323 2.2E-146 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CKQ55_RS05490 1f201c9e1febd8acd599a577a626c3a5 483 Pfam PF06381 Protein of unknown function (DUF1073) 48 396 1.1E-105 T 29-03-2018 IPR024459 Protein of unknown function DUF1073 CKQ55_RS05490 1f201c9e1febd8acd599a577a626c3a5 483 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 13 399 1.2E-76 T 29-03-2018 IPR006445 Phage-associated protein HI1409 CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 886 23.932 T 29-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 SMART SM00387 562 675 0.0054 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 Pfam PF16359 RcsD-ABL domain 684 785 7.2E-39 T 29-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 673 4.8E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 Gene3D G3DSA:3.30.565.10 508 675 1.4E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 Pfam PF01627 Hpt domain 807 867 1.0E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 SUPERFAMILY SSF55874 512 673 1.72E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 Gene3D G3DSA:1.20.120.160 771 886 5.5E-18 T 29-03-2018 CKQ55_RS21405 e12c62482c2c86d0d1e97ae2627ea19e 886 SUPERFAMILY SSF47226 803 885 3.27E-21 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 Pfam PF13624 SurA N-terminal domain 1 165 5.2E-53 T 29-03-2018 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 SUPERFAMILY SSF54534 224 354 1.24E-21 T 29-03-2018 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 Gene3D G3DSA:1.10.4030.10 178 231 0.0013 T 29-03-2018 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 Gene3D G3DSA:1.10.4030.10 38 171 6.3E-24 T 29-03-2018 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 Gene3D G3DSA:3.10.50.40 232 381 2.2E-31 T 29-03-2018 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 Gene3D G3DSA:3.10.50.40 382 496 3.6E-8 T 29-03-2018 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 Pfam PF13145 PPIC-type PPIASE domain 247 369 3.8E-24 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 SUPERFAMILY SSF109998 203 240 1.02E-36 T 29-03-2018 IPR027304 Trigger factor/SurA domain CKQ55_RS06180 582cdeb83234240911751ebbf1a92ccc 624 SUPERFAMILY SSF109998 39 169 1.02E-36 T 29-03-2018 IPR027304 Trigger factor/SurA domain CKQ55_RS26390 3bc4009137bac0491a259389946ed668 357 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 1.2E-129 T 29-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC CKQ55_RS26390 3bc4009137bac0491a259389946ed668 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 340 1.9E-42 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26390 3bc4009137bac0491a259389946ed668 357 Gene3D G3DSA:1.10.3470.10 46 355 7.5E-30 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS19475 b45e19d5772f37caeefff3daf6b3da52 264 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 137 169 1.6E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS19475 b45e19d5772f37caeefff3daf6b3da52 264 SUPERFAMILY SSF51161 126 213 4.44E-34 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS19475 b45e19d5772f37caeefff3daf6b3da52 264 SUPERFAMILY SSF51161 70 97 4.44E-34 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS19475 b45e19d5772f37caeefff3daf6b3da52 264 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 145 173 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS19475 b45e19d5772f37caeefff3daf6b3da52 264 Gene3D G3DSA:2.160.10.10 12 232 1.3E-32 T 29-03-2018 CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 2.2E-74 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 6.2E-5 T 29-03-2018 CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 6.2E-5 T 29-03-2018 CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 Gene3D G3DSA:3.40.50.880 1 196 3.1E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.65 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 Pfam PF00117 Glutamine amidotransferase class-I 12 194 4.9E-19 T 29-03-2018 IPR017926 Glutamine amidotransferase CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 SUPERFAMILY SSF52317 3 195 1.01E-54 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS22745 4f4dd86b81bf209d1ef7cc102324557a 196 PIRSF PIRSF000495 1 196 5.2E-65 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CKQ55_RS06530 2bfb88e295b20b46f49430c9563d7f2d 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 5.4E-126 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CKQ55_RS06530 2bfb88e295b20b46f49430c9563d7f2d 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 43.413 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CKQ55_RS31160 a8537c04288999b92e2936499d55f737 249 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 6 248 8.3E-92 T 29-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF CKQ55_RS31160 a8537c04288999b92e2936499d55f737 249 Pfam PF13728 F plasmid transfer operon protein 25 238 1.6E-63 T 29-03-2018 CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 Pfam PF00072 Response regulator receiver domain 4 115 2.2E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 Gene3D G3DSA:3.40.50.2300 1 153 5.5E-28 T 29-03-2018 CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 SUPERFAMILY SSF46785 175 233 3.07E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 SMART SM00448 2 116 3.4E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 SUPERFAMILY SSF52172 1 173 7.26E-32 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 PIRSF PIRSF006171 1 229 2.1E-79 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CKQ55_RS23715 206a1d73cb6c469b6a6cb68ffae1a24d 238 Gene3D G3DSA:1.10.10.10 154 234 5.3E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28050 75b04ccbd0f132ea606b64936b3c4456 465 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 2.9E-164 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS28050 75b04ccbd0f132ea606b64936b3c4456 465 PIRSF PIRSF006446 2 458 2.1E-220 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS28505 6bcbe718c98d3753f1cfb2f5cf0479ef 120 Pfam PF07883 Cupin domain 36 96 7.0E-14 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS28505 6bcbe718c98d3753f1cfb2f5cf0479ef 120 Gene3D G3DSA:2.60.120.10 5 120 7.1E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28505 6bcbe718c98d3753f1cfb2f5cf0479ef 120 SUPERFAMILY SSF51182 3 109 2.57E-23 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS04510 372067cf0b5b44467202a02632538fc7 316 Gene3D G3DSA:1.10.10.60 1 54 1.9E-14 T 29-03-2018 CKQ55_RS04510 372067cf0b5b44467202a02632538fc7 316 SUPERFAMILY SSF100950 63 313 8.37E-67 T 29-03-2018 CKQ55_RS04510 372067cf0b5b44467202a02632538fc7 316 Gene3D G3DSA:3.40.50.1360 60 314 2.0E-38 T 29-03-2018 CKQ55_RS04510 372067cf0b5b44467202a02632538fc7 316 Pfam PF04198 Putative sugar-binding domain 63 314 3.1E-63 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CKQ55_RS03670 eed7dd260c59be7c1dbb951dbaabb69e 550 SUPERFAMILY SSF117457 361 534 2.22E-55 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS03670 eed7dd260c59be7c1dbb951dbaabb69e 550 Pfam PF05683 Fumarase C-terminus 331 536 1.3E-81 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS03670 eed7dd260c59be7c1dbb951dbaabb69e 550 PIRSF PIRSF001394 29 550 5.1E-217 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CKQ55_RS03670 eed7dd260c59be7c1dbb951dbaabb69e 550 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 535 5.0E-54 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS03670 eed7dd260c59be7c1dbb951dbaabb69e 550 Pfam PF05681 Fumarate hydratase (Fumerase) 50 325 1.7E-79 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS03670 eed7dd260c59be7c1dbb951dbaabb69e 550 Gene3D G3DSA:3.20.130.10 358 535 5.3E-60 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS13970 d56c68afe4ff44e31b3dea0dbe77a34e 332 SUPERFAMILY SSF89733 1 332 3.01E-92 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CKQ55_RS13970 d56c68afe4ff44e31b3dea0dbe77a34e 332 Gene3D G3DSA:3.30.1370.60 71 303 1.0E-65 T 29-03-2018 CKQ55_RS13970 d56c68afe4ff44e31b3dea0dbe77a34e 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 84.694 T 29-03-2018 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.13+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 CKQ55_RS13970 d56c68afe4ff44e31b3dea0dbe77a34e 332 Gene3D G3DSA:1.10.1530.10 3 70 1.1E-18 T 29-03-2018 CKQ55_RS13970 d56c68afe4ff44e31b3dea0dbe77a34e 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 1.6E-101 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CKQ55_RS10775 6f4887f5c4c10d9d5ec66429b4d482bb 269 Pfam PF04230 Polysaccharide pyruvyl transferase 29 238 9.0E-12 T 29-03-2018 IPR007345 Polysaccharide pyruvyl transferase CKQ55_RS14605 1d2c327b82f540fe32d65ca63ce4c730 193 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 158 2.4E-12 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS14605 1d2c327b82f540fe32d65ca63ce4c730 193 SUPERFAMILY SSF56214 31 79 8.89E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS14605 1d2c327b82f540fe32d65ca63ce4c730 193 Gene3D G3DSA:3.90.470.20 20 97 4.3E-12 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS14605 1d2c327b82f540fe32d65ca63ce4c730 193 SUPERFAMILY SSF56214 87 179 2.62E-16 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS14605 1d2c327b82f540fe32d65ca63ce4c730 193 Gene3D G3DSA:3.90.470.20 98 180 8.3E-13 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS02665 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS02665 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS02665 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS02665 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 277 6.6E-72 T 29-03-2018 CKQ55_RS02665 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CKQ55_RS02665 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CKQ55_RS13210 b5c23aa432c558f9b10a82f610bef223 148 Gene3D G3DSA:3.40.630.30 5 143 5.5E-19 T 29-03-2018 CKQ55_RS13210 b5c23aa432c558f9b10a82f610bef223 148 SUPERFAMILY SSF55729 12 139 3.19E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS13210 b5c23aa432c558f9b10a82f610bef223 148 Pfam PF13673 Acetyltransferase (GNAT) domain 39 139 9.1E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS30775 2c98dda954a704c5a107bf431e1cd00f 87 Pfam PF06440 DNA polymerase III, theta subunit 3 71 9.2E-34 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS30775 2c98dda954a704c5a107bf431e1cd00f 87 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 5 74 1.0E-9 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS30775 2c98dda954a704c5a107bf431e1cd00f 87 Gene3D G3DSA:1.20.58.250 4 66 6.4E-29 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS30775 2c98dda954a704c5a107bf431e1cd00f 87 SUPERFAMILY SSF46575 2 80 5.89E-35 T 29-03-2018 CKQ55_RS01295 4ff6ecb58354d9af3eb87affe112c207 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.3E-26 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS01295 4ff6ecb58354d9af3eb87affe112c207 221 Gene3D G3DSA:1.10.3720.10 2 218 5.7E-37 T 29-03-2018 CKQ55_RS01295 4ff6ecb58354d9af3eb87affe112c207 221 SUPERFAMILY SSF161098 14 203 1.13E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01295 4ff6ecb58354d9af3eb87affe112c207 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 206 3.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 SUPERFAMILY SSF56655 9 264 1.57E-63 T 29-03-2018 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 Pfam PF00459 Inositol monophosphatase family 10 242 2.8E-46 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 2.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 2.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 2.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 2.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 2.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 2.6E-27 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 Gene3D G3DSA:3.30.540.10 7 159 1.2E-42 T 29-03-2018 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 Gene3D G3DSA:3.40.190.80 160 267 3.4E-12 T 29-03-2018 CKQ55_RS04335 a556886940ff19b85859c8661168da32 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CKQ55_RS18935 7667ceb9c7588bedf4f0a2dd1c392aa6 454 Pfam PF07690 Major Facilitator Superfamily 14 390 9.8E-57 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS18935 7667ceb9c7588bedf4f0a2dd1c392aa6 454 Gene3D G3DSA:1.20.1250.20 2 208 1.5E-38 T 29-03-2018 CKQ55_RS18935 7667ceb9c7588bedf4f0a2dd1c392aa6 454 PIRSF PIRSF002808 1 432 7.7E-41 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS18935 7667ceb9c7588bedf4f0a2dd1c392aa6 454 Gene3D G3DSA:1.20.1250.20 218 441 6.4E-26 T 29-03-2018 CKQ55_RS18935 7667ceb9c7588bedf4f0a2dd1c392aa6 454 SUPERFAMILY SSF103473 4 425 1.31E-78 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS09190 9c058c682fb7d0fbd9ebd416599c9c9c 255 Gene3D G3DSA:3.30.420.40 2 91 0.011 T 29-03-2018 CKQ55_RS09190 9c058c682fb7d0fbd9ebd416599c9c9c 255 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 248 4.5E-65 T 29-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CKQ55_RS09190 9c058c682fb7d0fbd9ebd416599c9c9c 255 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 7.5E-99 T 29-03-2018 IPR008275 CoA enzyme activase CKQ55_RS09190 9c058c682fb7d0fbd9ebd416599c9c9c 255 SUPERFAMILY SSF53067 4 250 9.51E-30 T 29-03-2018 CKQ55_RS09190 9c058c682fb7d0fbd9ebd416599c9c9c 255 Gene3D G3DSA:3.30.420.40 92 233 1.4E-33 T 29-03-2018 CKQ55_RS27030 14a6e614a3f5aa4ce3d6dc1dfc4e245f 142 TIGRFAM TIGR02794 tolA_full: protein TolA 34 142 5.6E-19 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CKQ55_RS27030 14a6e614a3f5aa4ce3d6dc1dfc4e245f 142 Pfam PF06519 TolA C-terminal 51 140 2.4E-20 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CKQ55_RS27030 14a6e614a3f5aa4ce3d6dc1dfc4e245f 142 SUPERFAMILY SSF74653 57 142 2.22E-18 T 29-03-2018 CKQ55_RS27030 14a6e614a3f5aa4ce3d6dc1dfc4e245f 142 Gene3D G3DSA:3.30.1150.10 55 142 1.4E-17 T 29-03-2018 CKQ55_RS22920 3edba439fc5ac7f9f9289ea36ee5d945 352 Pfam PF04632 Fusaric acid resistance protein family 21 332 2.4E-16 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CKQ55_RS07245 c0d98d9d97c53c9ad8ed7ab771722ba0 472 Gene3D G3DSA:3.20.20.80 60 352 1.8E-12 T 29-03-2018 CKQ55_RS07245 c0d98d9d97c53c9ad8ed7ab771722ba0 472 Pfam PF16116 Domain of unknown function (DUF4832) 296 454 1.0E-16 T 29-03-2018 IPR032267 Domain of unknown function DUF4832 CKQ55_RS07245 c0d98d9d97c53c9ad8ed7ab771722ba0 472 SUPERFAMILY SSF51445 73 277 1.43E-13 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS07245 c0d98d9d97c53c9ad8ed7ab771722ba0 472 Pfam PF02449 Beta-galactosidase 74 179 1.2E-6 T 29-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CKQ55_RS18340 880312a0e85cce753e1e738813b04bb0 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 239 1.2E-106 T 29-03-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CKQ55_RS18340 880312a0e85cce753e1e738813b04bb0 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 1.3E-38 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18340 880312a0e85cce753e1e738813b04bb0 241 Gene3D G3DSA:3.30.950.10 121 238 9.7E-52 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18340 880312a0e85cce753e1e738813b04bb0 241 SUPERFAMILY SSF53790 1 239 5.23E-57 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS18340 880312a0e85cce753e1e738813b04bb0 241 Gene3D G3DSA:3.40.1010.10 1 120 8.3E-34 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CKQ55_RS27880 9d55b210c3ecf42f832c0c6d7a39216f 438 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 424 5.6E-163 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CKQ55_RS27880 9d55b210c3ecf42f832c0c6d7a39216f 438 Pfam PF00296 Luciferase-like monooxygenase 20 381 2.5E-64 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS27880 9d55b210c3ecf42f832c0c6d7a39216f 438 SUPERFAMILY SSF51679 4 431 1.05E-127 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS27880 9d55b210c3ecf42f832c0c6d7a39216f 438 Gene3D G3DSA:3.20.20.30 1 438 8.7E-100 T 29-03-2018 CKQ55_RS27880 9d55b210c3ecf42f832c0c6d7a39216f 438 PIRSF PIRSF000337 2 438 2.2E-143 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CKQ55_RS23880 5ece28df776cd68abf0ca6f8a4f32786 293 Pfam PF01435 Peptidase family M48 74 288 1.2E-39 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CKQ55_RS23880 5ece28df776cd68abf0ca6f8a4f32786 293 Gene3D G3DSA:3.30.2010.10 64 157 3.6E-21 T 29-03-2018 CKQ55_RS23880 5ece28df776cd68abf0ca6f8a4f32786 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.09 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CKQ55_RS23635 2664ae8477664564dfbf92bf2a081be0 340 SUPERFAMILY SSF53335 88 317 1.36E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS23635 2664ae8477664564dfbf92bf2a081be0 340 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.904 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CKQ55_RS23635 2664ae8477664564dfbf92bf2a081be0 340 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.9E-168 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CKQ55_RS23635 2664ae8477664564dfbf92bf2a081be0 340 Gene3D G3DSA:3.40.50.150 17 323 6.9E-26 T 29-03-2018 CKQ55_RS23635 2664ae8477664564dfbf92bf2a081be0 340 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 5.8E-148 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CKQ55_RS08260 b0fc94b9a81964cb456bcadaf2937ee9 436 Gene3D G3DSA:1.20.1250.20 15 216 1.7E-38 T 29-03-2018 CKQ55_RS08260 b0fc94b9a81964cb456bcadaf2937ee9 436 Pfam PF07690 Major Facilitator Superfamily 30 392 8.8E-55 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS08260 b0fc94b9a81964cb456bcadaf2937ee9 436 Gene3D G3DSA:1.20.1250.20 231 428 1.7E-23 T 29-03-2018 CKQ55_RS08260 b0fc94b9a81964cb456bcadaf2937ee9 436 SUPERFAMILY SSF103473 16 432 5.1E-82 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29080 89dad1ee00ac6351ee838f190501e123 96 Gene3D G3DSA:3.10.20.30 1 91 2.1E-17 T 29-03-2018 IPR012675 Beta-grasp domain CKQ55_RS29080 89dad1ee00ac6351ee838f190501e123 96 SUPERFAMILY SSF54285 1 91 5.79E-21 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CKQ55_RS29080 89dad1ee00ac6351ee838f190501e123 96 Pfam PF02597 ThiS family 6 91 1.1E-11 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 5 396 1.3E-137 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 SUPERFAMILY SSF103473 5 399 4.58E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 Pfam PF01306 LacY proton/sugar symporter 4 403 1.2E-138 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 210 238 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 280 306 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 342 362 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 256 277 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 PRINTS PR00174 LacY proton/sugar symporter family signature 311 330 1.3E-81 T 29-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 Gene3D G3DSA:1.20.1250.20 202 404 4.3E-16 T 29-03-2018 CKQ55_RS10300 46aede2f3ce72821b61aee167792a0f6 410 Gene3D G3DSA:1.20.1250.20 2 200 3.1E-21 T 29-03-2018 CKQ55_RS23525 102ef2125992c8ae5517d14072219b8a 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 6.8E-34 T 29-03-2018 IPR019620 Putative metal-binding protein CKQ55_RS23525 102ef2125992c8ae5517d14072219b8a 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 3.2E-34 T 29-03-2018 IPR019620 Putative metal-binding protein CKQ55_RS22210 29b2467089a4e3a3bcedc01cd0601d69 337 Gene3D G3DSA:1.10.150.130 49 164 3.2E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS22210 29b2467089a4e3a3bcedc01cd0601d69 337 Gene3D G3DSA:1.10.443.10 165 320 7.3E-37 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS22210 29b2467089a4e3a3bcedc01cd0601d69 337 SUPERFAMILY SSF56349 61 316 7.36E-47 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS22210 29b2467089a4e3a3bcedc01cd0601d69 337 Pfam PF00589 Phage integrase family 164 308 1.1E-23 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS20515 8491879bc6d61cb028398ff29f37c22e 467 SUPERFAMILY SSF53067 8 266 1.5E-8 T 29-03-2018 CKQ55_RS20515 8491879bc6d61cb028398ff29f37c22e 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 2.2E-177 T 29-03-2018 IPR009377 Ethanolamine utilisation EutA CKQ55_RS20515 8491879bc6d61cb028398ff29f37c22e 467 PIRSF PIRSF012293 2 467 3.1E-206 T 29-03-2018 IPR009377 Ethanolamine utilisation EutA CKQ55_RS20515 8491879bc6d61cb028398ff29f37c22e 467 Gene3D G3DSA:3.30.420.40 2 111 0.14 T 29-03-2018 CKQ55_RS20515 8491879bc6d61cb028398ff29f37c22e 467 Gene3D G3DSA:3.30.420.150 127 329 4.2E-9 T 29-03-2018 CKQ55_RS25120 cc5e62af763c332d004eff106d31c6af 350 Gene3D G3DSA:1.10.3470.10 22 349 2.1E-60 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS25120 cc5e62af763c332d004eff106d31c6af 350 Pfam PF01032 FecCD transport family 37 345 8.6E-79 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS25120 cc5e62af763c332d004eff106d31c6af 350 SUPERFAMILY SSF81345 20 346 1.7E-70 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS19555 3e6fdd3c0387fe40997ccf37f8cee194 310 SUPERFAMILY SSF52283 39 112 5.78E-8 T 29-03-2018 CKQ55_RS19555 3e6fdd3c0387fe40997ccf37f8cee194 310 Gene3D G3DSA:3.40.50.720 108 278 2.7E-44 T 29-03-2018 CKQ55_RS19555 3e6fdd3c0387fe40997ccf37f8cee194 310 SUPERFAMILY SSF51735 96 276 3.01E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS19555 3e6fdd3c0387fe40997ccf37f8cee194 310 Gene3D G3DSA:3.40.50.720 2 107 2.8E-9 T 29-03-2018 CKQ55_RS19555 3e6fdd3c0387fe40997ccf37f8cee194 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 275 9.7E-42 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 Gene3D G3DSA:3.30.420.40 2 278 2.7E-37 T 29-03-2018 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 551 2.9E-263 T 29-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 Gene3D G3DSA:3.30.420.40 279 550 1.1E-52 T 29-03-2018 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 SUPERFAMILY SSF53067 5 284 1.48E-20 T 29-03-2018 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 SUPERFAMILY SSF53067 285 542 2.5E-43 T 29-03-2018 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 7.8E-38 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS08305 6b0a06e2d31d3d47832f8bd663cd7e0f 569 Hamap MF_00520 Ribulokinase [araB]. 1 558 57.719 T 29-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 CKQ55_RS29265 343f554b978663b88014818b44be3215 237 SUPERFAMILY SSF53187 134 231 1.09E-32 T 29-03-2018 CKQ55_RS29265 343f554b978663b88014818b44be3215 237 SUPERFAMILY SSF53187 19 107 1.09E-32 T 29-03-2018 CKQ55_RS29265 343f554b978663b88014818b44be3215 237 Pfam PF00246 Zinc carboxypeptidase 73 157 7.1E-12 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CKQ55_RS29265 343f554b978663b88014818b44be3215 237 Gene3D G3DSA:3.40.630.10 37 235 6.5E-27 T 29-03-2018 CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 2.9E-10 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 Gene3D G3DSA:3.40.30.10 1 101 6.7E-13 T 29-03-2018 CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 5.1E-99 T 29-03-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 6.5E-50 T 29-03-2018 IPR007494 Glutaredoxin 2, C-terminal CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 Gene3D G3DSA:1.20.1050.10 102 215 2.2E-34 T 29-03-2018 CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 SUPERFAMILY SSF47616 76 215 2.11E-48 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS00865 7ce1f6e20306ab2ba20c5a633d50bfb8 215 SUPERFAMILY SSF52833 1 86 9.2E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS15755 460bae25cdf665d99d37141c4ebcab39 205 Pfam PF05683 Fumarase C-terminus 10 181 1.4E-37 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS15755 460bae25cdf665d99d37141c4ebcab39 205 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 13 181 1.5E-65 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS15755 460bae25cdf665d99d37141c4ebcab39 205 Gene3D G3DSA:3.20.130.10 2 180 1.3E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS15755 460bae25cdf665d99d37141c4ebcab39 205 SUPERFAMILY SSF117457 4 180 1.05E-57 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CKQ55_RS09460 5880d6f625729900be1c3aa5f936f0b1 291 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 26 224 5.1E-41 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS09460 5880d6f625729900be1c3aa5f936f0b1 291 SUPERFAMILY SSF64167 25 285 6.93E-45 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS09460 5880d6f625729900be1c3aa5f936f0b1 291 Gene3D G3DSA:3.40.1210.10 25 290 4.8E-54 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS09460 5880d6f625729900be1c3aa5f936f0b1 291 Pfam PF01975 Survival protein SurE 27 220 7.7E-45 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 SMART SM00448 2 111 2.6E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 SUPERFAMILY SSF52172 2 188 4.27E-41 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 9.3E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 Gene3D G3DSA:1.10.10.10 120 232 3.8E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 Gene3D G3DSA:3.40.50.2300 2 119 3.4E-38 T 29-03-2018 CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 SMART SM00862 152 228 4.4E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS12330 0669133e31a808f78cffa07ea8a0ddf4 232 Pfam PF00072 Response regulator receiver domain 4 112 3.6E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 105 1.3E-23 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 Gene3D G3DSA:3.30.1300.30 31 121 7.6E-21 T 29-03-2018 CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 8.3E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 Pfam PF02501 Type II secretion system (T2SS), protein I 40 118 2.3E-19 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 SUPERFAMILY SSF54523 38 119 1.88E-19 T 29-03-2018 CKQ55_RS04815 932e25dbacbefde69d0b6f98dd2fe8f1 121 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 8.1E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CKQ55_RS30260 5831b065396c09a67138f8e0d00f95b0 81 SUPERFAMILY SSF54857 11 80 9.94E-16 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS30260 5831b065396c09a67138f8e0d00f95b0 81 Gene3D G3DSA:3.30.910.10 2 79 1.0E-18 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS30260 5831b065396c09a67138f8e0d00f95b0 81 Pfam PF06183 DinI-like family 19 79 6.5E-14 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS26635 083fd47ad8dd3382c2c958d67afca8b9 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 383 1.7E-82 T 29-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CKQ55_RS26635 083fd47ad8dd3382c2c958d67afca8b9 395 Gene3D G3DSA:1.20.1250.20 211 387 1.8E-14 T 29-03-2018 CKQ55_RS26635 083fd47ad8dd3382c2c958d67afca8b9 395 Gene3D G3DSA:1.20.1250.20 4 199 4.5E-6 T 29-03-2018 CKQ55_RS26635 083fd47ad8dd3382c2c958d67afca8b9 395 SUPERFAMILY SSF103473 9 383 5.23E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 Gene3D G3DSA:3.20.20.10 34 262 9.8E-47 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 1.6E-27 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 1.6E-27 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 1.6E-27 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 1.6E-27 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 376 1.6E-24 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.356 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 275 4.6E-63 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 Gene3D G3DSA:2.40.37.10 263 420 1.6E-45 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 1.1E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.1E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.1E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 1.1E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 1.1E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 SUPERFAMILY SSF50621 250 419 1.82E-57 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 SUPERFAMILY SSF51419 25 277 4.51E-57 T 29-03-2018 IPR029066 PLP-binding barrel CKQ55_RS18005 2aacd7b9106e00dac7caeaaa6feb1fd2 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 418 4.4E-138 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CKQ55_RS10230 5e4a06581e6ae25897d3b90da979e67e 402 Pfam PF14486 Domain of unknown function (DUF4432) 63 368 1.1E-112 T 29-03-2018 IPR027839 Protein of unknown function DUF4432 CKQ55_RS10230 5e4a06581e6ae25897d3b90da979e67e 402 Gene3D G3DSA:2.70.98.10 56 371 1.3E-18 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CKQ55_RS05515 26f960c8a68b3f46bc9bd9e19b51bdb6 180 SUPERFAMILY SSF53955 2 175 6.47E-45 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS05515 26f960c8a68b3f46bc9bd9e19b51bdb6 180 Pfam PF09374 Predicted Peptidoglycan domain 94 178 3.0E-23 T 29-03-2018 IPR018537 Peptidoglycan binding domain CKQ55_RS05515 26f960c8a68b3f46bc9bd9e19b51bdb6 180 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.2E-25 T 29-03-2018 IPR008565 Protein of unknown function DUF847 CKQ55_RS05515 26f960c8a68b3f46bc9bd9e19b51bdb6 180 Gene3D G3DSA:1.20.141.10 1 180 7.3E-44 T 29-03-2018 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.9E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.9E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 Gene3D G3DSA:1.10.10.60 1 49 2.1E-18 T 29-03-2018 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 201 3.8E-38 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 SUPERFAMILY SSF46689 1 66 2.82E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 SUPERFAMILY SSF48498 84 201 2.67E-15 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.9E-17 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS15575 9594532b0c7d5f79d128ef2d8b7f8e98 213 Gene3D G3DSA:1.10.10.60 50 141 3.1E-12 T 29-03-2018 CKQ55_RS10910 346088a5e3498f4b2401bb4830bb0e92 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 29 43 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS10910 346088a5e3498f4b2401bb4830bb0e92 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 205 3.4E-66 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS10910 346088a5e3498f4b2401bb4830bb0e92 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS10910 346088a5e3498f4b2401bb4830bb0e92 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 196 1.1E-63 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS10910 346088a5e3498f4b2401bb4830bb0e92 231 Gene3D G3DSA:3.20.20.70 1 218 5.9E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS10910 346088a5e3498f4b2401bb4830bb0e92 231 SUPERFAMILY SSF51366 1 213 1.84E-58 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS30010 f20e903236f6116edefae6a5ebc8e858 262 Pfam PF13649 Methyltransferase domain 43 140 3.8E-21 T 29-03-2018 CKQ55_RS30010 f20e903236f6116edefae6a5ebc8e858 262 SUPERFAMILY SSF53335 16 223 8.13E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS30010 f20e903236f6116edefae6a5ebc8e858 262 Gene3D G3DSA:3.40.50.150 17 221 2.8E-35 T 29-03-2018 CKQ55_RS30510 d3d087b80263ba7bdaf4d9d2d2df4dc2 772 SUPERFAMILY SSF52540 185 572 2.32E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30510 d3d087b80263ba7bdaf4d9d2d2df4dc2 772 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 5.0E-122 T 29-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CKQ55_RS30510 d3d087b80263ba7bdaf4d9d2d2df4dc2 772 Gene3D G3DSA:3.40.50.300 130 574 8.1E-39 T 29-03-2018 CKQ55_RS30510 d3d087b80263ba7bdaf4d9d2d2df4dc2 772 Pfam PF12615 F sex factor protein N terminal 31 128 1.8E-29 T 29-03-2018 IPR022585 TraD coupling protein, N-terminal CKQ55_RS30510 d3d087b80263ba7bdaf4d9d2d2df4dc2 772 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 576 6.0E-242 T 29-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 CKQ55_RS09710 0833d709499ff898c969c6912257dac6 111 Pfam PF03050 Transposase IS66 family 4 61 9.0E-20 T 29-03-2018 IPR004291 Transposase, IS66 CKQ55_RS09710 0833d709499ff898c969c6912257dac6 111 Pfam PF13817 IS66 C-terminal element 68 105 4.4E-15 T 29-03-2018 CKQ55_RS01565 bb9f493b03609af08b64d215ea7e41c9 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 252 2.9E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS01565 bb9f493b03609af08b64d215ea7e41c9 274 Gene3D G3DSA:3.40.190.10 132 215 1.6E-12 T 29-03-2018 CKQ55_RS01565 bb9f493b03609af08b64d215ea7e41c9 274 Gene3D G3DSA:3.40.190.10 26 131 1.5E-20 T 29-03-2018 CKQ55_RS01565 bb9f493b03609af08b64d215ea7e41c9 274 SMART SM00062 36 253 1.7E-27 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS01565 bb9f493b03609af08b64d215ea7e41c9 274 SUPERFAMILY SSF53850 27 253 8.96E-44 T 29-03-2018 CKQ55_RS20795 d03a8f2f64e892f44dc521bff79adda9 395 Gene3D G3DSA:1.20.1250.20 4 194 1.6E-16 T 29-03-2018 CKQ55_RS20795 d03a8f2f64e892f44dc521bff79adda9 395 SUPERFAMILY SSF103473 9 387 1.7E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20795 d03a8f2f64e892f44dc521bff79adda9 395 Pfam PF07690 Major Facilitator Superfamily 27 344 2.1E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS20795 d03a8f2f64e892f44dc521bff79adda9 395 Gene3D G3DSA:1.20.1250.20 195 383 5.0E-26 T 29-03-2018 CKQ55_RS21075 63a89a851155d59861e0f06e22ac3528 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.232 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 CKQ55_RS21075 63a89a851155d59861e0f06e22ac3528 151 Pfam PF04217 Protein of unknown function, DUF412 12 149 5.5E-57 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 CKQ55_RS09130 47883cef36f8d1be51505d706c10d158 181 SUPERFAMILY SSF56925 50 159 9.68E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS09130 47883cef36f8d1be51505d706c10d158 181 Gene3D G3DSA:2.40.160.10 10 181 5.1E-4 T 29-03-2018 CKQ55_RS09130 47883cef36f8d1be51505d706c10d158 181 Pfam PF07437 YfaZ precursor 1 181 1.4E-45 T 29-03-2018 IPR009998 YfaZ CKQ55_RS02415 ea3e680f96be57b9fe2d691a315842eb 159 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 9.9E-16 T 29-03-2018 IPR019660 Putative sensory transduction regulator YbjN CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 Gene3D G3DSA:3.40.1190.20 1 306 8.5E-59 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 PRINTS PR00990 Ribokinase signature 24 43 6.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 PRINTS PR00990 Ribokinase signature 175 190 6.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 PRINTS PR00990 Ribokinase signature 214 225 6.4E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 Pfam PF00294 pfkB family carbohydrate kinase 2 303 4.5E-45 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 SUPERFAMILY SSF53613 2 302 1.4E-62 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS26820 e4731b81985a09647f4aaa2b9518fffa 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS01135 d3750f869e648fb4ac8dfde91c7c5076 75 Pfam PF13993 YccJ-like protein 9 75 3.7E-40 T 29-03-2018 IPR025600 YccJ-like protein CKQ55_RS22390 a4d117f90d939d0e18b458b78e5cec11 39 Pfam PF06528 Phage P2 GpE 1 36 3.0E-23 T 29-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 CKQ55_RS05110 45bc4abd4a22ac2ab6d8c27df15e8251 307 SUPERFAMILY SSF53822 23 302 1.39E-86 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS05110 45bc4abd4a22ac2ab6d8c27df15e8251 307 Gene3D G3DSA:3.40.50.2300 25 131 1.1E-22 T 29-03-2018 CKQ55_RS05110 45bc4abd4a22ac2ab6d8c27df15e8251 307 Gene3D G3DSA:3.40.50.2300 132 307 2.2E-48 T 29-03-2018 CKQ55_RS05110 45bc4abd4a22ac2ab6d8c27df15e8251 307 Pfam PF13407 Periplasmic binding protein domain 27 281 1.7E-60 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 SUPERFAMILY SSF103088 222 344 1.16E-35 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 Gene3D G3DSA:2.40.160.20 9 216 1.4E-51 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 250 269 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 289 308 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 221 236 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 112 128 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 323 336 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 189 203 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01022 Outer membrane protein A signature 175 189 1.4E-72 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 SUPERFAMILY SSF56925 22 204 1.91E-40 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 ProSitePatterns PS01068 OmpA-like domain. 267 311 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 Gene3D G3DSA:3.30.1330.60 217 355 1.4E-40 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 Pfam PF00691 OmpA family 232 327 7.4E-24 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 Pfam PF01389 OmpA-like transmembrane domain 23 204 3.4E-74 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01021 OMPA domain signature 265 280 6.0E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01021 OMPA domain signature 280 296 6.0E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS01905 99b236f016b32a43063113b587e3ecf1 356 PRINTS PR01021 OMPA domain signature 233 255 6.0E-24 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS10360 eca2efaebece749327762723aefa70bd 467 Pfam PF00324 Amino acid permease 27 465 6.8E-121 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS10360 eca2efaebece749327762723aefa70bd 467 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS10360 eca2efaebece749327762723aefa70bd 467 PIRSF PIRSF006060 1 466 1.3E-69 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS21720 1b7843f963dc8a80c8999cbab702526b 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 5.0E-152 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CKQ55_RS21720 1b7843f963dc8a80c8999cbab702526b 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 1.4E-64 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CKQ55_RS21720 1b7843f963dc8a80c8999cbab702526b 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.8E-21 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 Gene3D G3DSA:2.40.160.10 11 361 8.3E-49 T 29-03-2018 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 1.6E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 1.6E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 264 283 1.6E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 234 251 1.6E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.6E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 1.6E-67 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 SUPERFAMILY SSF56935 23 361 7.33E-73 T 29-03-2018 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 313 330 3.1E-14 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 228 240 3.1E-14 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 3.1E-14 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 3.1E-14 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 3.1E-14 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS02005 a1d8861451e17b9ec0b1f2f5525b3fa0 361 Pfam PF00267 Gram-negative porin 28 361 2.6E-127 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CKQ55_RS28645 f1c63fa39dfda543aabbc330b90465eb 178 Gene3D G3DSA:2.10.109.10 35 172 8.0E-22 T 29-03-2018 CKQ55_RS28645 f1c63fa39dfda543aabbc330b90465eb 178 SUPERFAMILY SSF51306 40 170 1.96E-21 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS28645 f1c63fa39dfda543aabbc330b90465eb 178 Pfam PF00717 Peptidase S24-like 89 155 1.1E-11 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 Gene3D G3DSA:1.10.10.60 58 109 8.3E-15 T 29-03-2018 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 Pfam PF12833 Helix-turn-helix domain 27 105 7.1E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 SMART SM00342 21 104 6.2E-33 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 Gene3D G3DSA:1.10.10.60 1 57 2.5E-16 T 29-03-2018 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 SUPERFAMILY SSF46689 57 106 1.34E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS11025 896685c9d5f7cebc55809e67fe1e2594 109 SUPERFAMILY SSF46689 4 56 1.39E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS22725 ce19fbce59de56cca55e72419d2f786c 439 SUPERFAMILY SSF53448 10 232 3.94E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22725 ce19fbce59de56cca55e72419d2f786c 439 Gene3D G3DSA:3.90.550.10 2 291 1.3E-44 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22725 ce19fbce59de56cca55e72419d2f786c 439 Pfam PF00535 Glycosyl transferase family 2 11 141 4.7E-38 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS22725 ce19fbce59de56cca55e72419d2f786c 439 Gene3D G3DSA:1.20.120.330 313 426 3.5E-6 T 29-03-2018 CKQ55_RS31850 8df6bc3acf016652a49662e6076dacc4 171 SUPERFAMILY SSF46565 2 98 1.13E-15 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS31850 8df6bc3acf016652a49662e6076dacc4 171 Gene3D G3DSA:1.10.287.110 1 62 1.7E-14 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS31850 8df6bc3acf016652a49662e6076dacc4 171 PRINTS PR00625 DnaJ domain signature 7 25 3.0E-6 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS31850 8df6bc3acf016652a49662e6076dacc4 171 PRINTS PR00625 DnaJ domain signature 25 40 3.0E-6 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS31850 8df6bc3acf016652a49662e6076dacc4 171 SMART SM00271 4 59 5.8E-11 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS31850 8df6bc3acf016652a49662e6076dacc4 171 Pfam PF00226 DnaJ domain 9 56 2.3E-10 T 29-03-2018 IPR001623 DnaJ domain CKQ55_RS26495 e40ac700e541a419d003a1127d222673 412 SUPERFAMILY SSF142764 9 406 1.7E-87 T 29-03-2018 CKQ55_RS26495 e40ac700e541a419d003a1127d222673 412 Gene3D G3DSA:3.40.50.10840 7 230 2.2E-56 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CKQ55_RS26495 e40ac700e541a419d003a1127d222673 412 Pfam PF07005 Putative sugar-binding N-terminal domain 9 222 4.9E-51 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CKQ55_RS26495 e40ac700e541a419d003a1127d222673 412 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 235 399 1.6E-30 T 29-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain CKQ55_RS13810 dad60b27e0ea37b7359f2297f404ffd2 295 Gene3D G3DSA:3.20.20.370 2 225 5.5E-80 T 29-03-2018 CKQ55_RS13810 dad60b27e0ea37b7359f2297f404ffd2 295 Pfam PF04748 Divergent polysaccharide deacetylase 12 222 3.6E-75 T 29-03-2018 IPR006837 Divergent polysaccharide deacetylase CKQ55_RS13810 dad60b27e0ea37b7359f2297f404ffd2 295 SUPERFAMILY SSF88713 8 222 8.15E-73 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS15605 2f0a15e5b14fa000cfcd90693958bddb 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 2.0E-22 T 29-03-2018 IPR010398 Protein of unknown function DUF997 CKQ55_RS15605 2f0a15e5b14fa000cfcd90693958bddb 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 3.2E-29 T 29-03-2018 IPR010398 Protein of unknown function DUF997 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 44.388 T 29-03-2018 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 SUPERFAMILY SSF46894 127 188 1.63E-10 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 Gene3D G3DSA:1.10.10.10 22 200 2.5E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 1.1E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 SMART SM00421 135 192 4.9E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.9E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.9E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS23430 a648adfb3eff516104c9e19ef9bfefd5 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.9E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS05610 5c76d56a12f370c735114af584430d8c 77 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 5 68 7.1E-24 T 29-03-2018 IPR031856 Putative bacterial antitoxin YdaS CKQ55_RS05610 5c76d56a12f370c735114af584430d8c 77 SUPERFAMILY SSF47413 4 64 3.76E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS05610 5c76d56a12f370c735114af584430d8c 77 Gene3D G3DSA:3.30.240.10 1 75 1.2E-19 T 29-03-2018 CKQ55_RS26695 f45094dbfc3545642cf329285b671184 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 120 1.9E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS26695 f45094dbfc3545642cf329285b671184 232 SUPERFAMILY SSF161098 18 213 1.44E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS26695 f45094dbfc3545642cf329285b671184 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 227 4.5E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS26695 f45094dbfc3545642cf329285b671184 232 Gene3D G3DSA:1.10.3720.10 2 229 1.2E-26 T 29-03-2018 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 Gene3D G3DSA:3.40.50.2000 264 472 6.3E-34 T 29-03-2018 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.685 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.1E-173 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 Gene3D G3DSA:3.40.50.2000 15 263 5.2E-12 T 29-03-2018 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 Pfam PF08323 Starch synthase catalytic domain 2 234 3.5E-71 T 29-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 SUPERFAMILY SSF53756 5 476 5.58E-117 T 29-03-2018 CKQ55_RS14945 8250c8491d0b5ba1cc28532981a13b28 477 Pfam PF00534 Glycosyl transferases group 1 288 437 1.2E-12 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS09515 5e6e6cb03d3327d7c2ea62b2b0571803 343 Pfam PF06674 Protein of unknown function (DUF1176) 26 337 1.4E-103 T 29-03-2018 IPR009560 Protein of unknown function DUF1176 CKQ55_RS18265 be2cc1c4750a42067467c7a9967d80fb 99 SUPERFAMILY SSF143414 14 84 5.1E-13 T 29-03-2018 CKQ55_RS18265 be2cc1c4750a42067467c7a9967d80fb 99 Pfam PF00936 BMC domain 15 85 2.1E-15 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18265 be2cc1c4750a42067467c7a9967d80fb 99 SMART SM00877 14 91 2.7E-15 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20860 31ee46c3d70dc456428a1ad5dfe1c7bb 183 SMART SM00463 95 173 1.5E-22 T 29-03-2018 IPR002625 Smr domain CKQ55_RS20860 31ee46c3d70dc456428a1ad5dfe1c7bb 183 Pfam PF01713 Smr domain 98 172 7.7E-18 T 29-03-2018 IPR002625 Smr domain CKQ55_RS20860 31ee46c3d70dc456428a1ad5dfe1c7bb 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.547 T 29-03-2018 IPR022990 Uncharacterised protein family UPF0115 CKQ55_RS20860 31ee46c3d70dc456428a1ad5dfe1c7bb 183 SUPERFAMILY SSF160443 96 170 5.36E-10 T 29-03-2018 IPR002625 Smr domain CKQ55_RS09620 e9bba05cf95c948ce20dae7a802d8320 90 Pfam PF13817 IS66 C-terminal element 46 82 2.9E-16 T 29-03-2018 CKQ55_RS09620 e9bba05cf95c948ce20dae7a802d8320 90 Pfam PF03050 Transposase IS66 family 1 39 4.9E-13 T 29-03-2018 IPR004291 Transposase, IS66 CKQ55_RS11000 f5badeaae9731a6756dfe4a0fddc3c31 548 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 3.7E-76 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CKQ55_RS11000 f5badeaae9731a6756dfe4a0fddc3c31 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 2.4E-240 T 29-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CKQ55_RS03300 c81a2b9e2b4c62eedf5fe7de09cd7bbf 547 Pfam PF00884 Sulfatase 238 527 2.9E-53 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CKQ55_RS03300 c81a2b9e2b4c62eedf5fe7de09cd7bbf 547 SUPERFAMILY SSF53649 239 531 2.62E-19 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS03300 c81a2b9e2b4c62eedf5fe7de09cd7bbf 547 Gene3D G3DSA:3.40.720.10 233 541 1.9E-21 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS03300 c81a2b9e2b4c62eedf5fe7de09cd7bbf 547 Pfam PF08019 Domain of unknown function (DUF1705) 60 208 4.0E-40 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CKQ55_RS28870 54ce825026acc9847f8866e57b6a380c 106 SUPERFAMILY SSF54909 1 100 3.8E-24 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS28870 54ce825026acc9847f8866e57b6a380c 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.3E-13 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CKQ55_RS28870 54ce825026acc9847f8866e57b6a380c 106 Gene3D G3DSA:3.30.70.100 1 94 6.9E-18 T 29-03-2018 CKQ55_RS08600 b24dd77579edde149135f539f60e892e 115 Pfam PF16083 LydA holin phage, holin superfamily III 22 101 1.7E-21 T 29-03-2018 IPR032126 LydA-like holin CKQ55_RS20745 6235ca5a6328c00ec69c9b1b7459be9c 400 Pfam PF07670 Nucleoside recognition 92 190 8.8E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS20745 6235ca5a6328c00ec69c9b1b7459be9c 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 82 2.4E-21 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CKQ55_RS20745 6235ca5a6328c00ec69c9b1b7459be9c 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 6.0E-145 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CKQ55_RS20745 6235ca5a6328c00ec69c9b1b7459be9c 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 3.1E-58 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 100 117 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 142 2.9E-36 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 Gene3D G3DSA:2.60.40.10 24 143 1.8E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 Gene3D G3DSA:2.60.40.10 145 237 4.2E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 SUPERFAMILY SSF49354 25 142 2.59E-37 T 29-03-2018 IPR008962 PapD-like CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 SUPERFAMILY SSF49584 152 232 4.06E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 PRINTS PR00969 Pili chaperone signature 101 118 6.8E-26 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 PRINTS PR00969 Pili chaperone signature 124 139 6.8E-26 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 PRINTS PR00969 Pili chaperone signature 161 176 6.8E-26 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 PRINTS PR00969 Pili chaperone signature 25 34 6.8E-26 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 PRINTS PR00969 Pili chaperone signature 71 92 6.8E-26 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS16760 87d8d4421abe8f4c8d9a3561516b6dba 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 223 6.2E-7 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS00650 a0644b9203cc37d026b71057e9ba6241 399 Pfam PF12704 MacB-like periplasmic core domain 27 204 1.5E-13 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CKQ55_RS00650 a0644b9203cc37d026b71057e9ba6241 399 Pfam PF02687 FtsX-like permease family 296 392 1.7E-14 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CKQ55_RS00650 a0644b9203cc37d026b71057e9ba6241 399 Gene3D G3DSA:1.10.3720.10 5 382 7.6E-6 T 29-03-2018 CKQ55_RS00650 a0644b9203cc37d026b71057e9ba6241 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 399 3.9E-145 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 3.0E-170 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.90.640.10 199 255 4.0E-27 T 29-03-2018 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 SUPERFAMILY SSF53067 9 152 6.66E-38 T 29-03-2018 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 9.7E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 9.7E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 9.7E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 9.7E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 9.7E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 Pfam PF06723 MreB/Mbl protein 11 338 3.5E-150 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.30.420.40 8 163 3.5E-42 T 29-03-2018 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 SUPERFAMILY SSF53067 153 340 1.81E-49 T 29-03-2018 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.30.420.40 164 198 3.4E-4 T 29-03-2018 CKQ55_RS15650 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.30.420.40 256 321 1.8E-8 T 29-03-2018 CKQ55_RS01925 7358a6e28dc9177c594ed77e267ba37d 55 Pfam PF04957 Ribosome modulation factor 1 52 1.1E-30 T 29-03-2018 IPR007040 Ribosome modulation factor CKQ55_RS01925 7358a6e28dc9177c594ed77e267ba37d 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 1.0E-23 T 29-03-2018 IPR007040 Ribosome modulation factor CKQ55_RS01925 7358a6e28dc9177c594ed77e267ba37d 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.64 T 29-03-2018 IPR007040 Ribosome modulation factor CKQ55_RS01925 7358a6e28dc9177c594ed77e267ba37d 55 Gene3D G3DSA:1.10.10.620 3 53 1.1E-26 T 29-03-2018 CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 SUPERFAMILY SSF46785 4 63 1.11E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 SMART SM00420 6 58 8.7E-22 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 SUPERFAMILY SSF100950 73 233 2.2E-35 T 29-03-2018 CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 SMART SM01134 72 233 2.5E-71 T 29-03-2018 CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 Gene3D G3DSA:1.10.10.10 1 61 1.6E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 Gene3D G3DSA:3.40.50.1360 66 233 1.0E-36 T 29-03-2018 CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 2.2E-51 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS19185 50505d83982a8bb8e49562f329bb576a 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.6E-20 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS12800 4779135deeb99cd3df6c6b6d8e28f47b 172 SUPERFAMILY SSF52540 2 165 2.37E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS12800 4779135deeb99cd3df6c6b6d8e28f47b 172 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 164 8.3E-52 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CKQ55_RS12800 4779135deeb99cd3df6c6b6d8e28f47b 172 Gene3D G3DSA:3.40.50.300 1 170 5.0E-31 T 29-03-2018 CKQ55_RS12800 4779135deeb99cd3df6c6b6d8e28f47b 172 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 139 3.6E-48 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CKQ55_RS31140 43bafa32a1079ac196ffcdd6e6ae8b2d 328 Pfam PF06834 TraU protein 26 327 1.3E-114 T 29-03-2018 IPR009649 TraU CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 394 3.4E-164 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 SUPERFAMILY SSF52507 3 180 1.7E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 368 6.6E-74 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 SUPERFAMILY SSF102645 184 399 6.67E-80 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 Gene3D G3DSA:3.40.50.1950 1 183 7.5E-53 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 Gene3D G3DSA:3.40.50.10300 184 402 1.6E-70 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CKQ55_RS13700 e2793ba0150adf1b89a6b20c3c8c107f 403 Pfam PF02441 Flavoprotein 6 179 1.7E-41 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CKQ55_RS04775 3df7a13581a675980abb7a1604a74f1e 122 Pfam PF04237 YjbR 15 106 9.3E-24 T 29-03-2018 IPR007351 Uncharacterised protein YjbR CKQ55_RS04775 3df7a13581a675980abb7a1604a74f1e 122 SUPERFAMILY SSF142906 8 119 1.18E-38 T 29-03-2018 CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 Gene3D G3DSA:1.20.1250.20 255 504 1.5E-32 T 29-03-2018 CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 SUPERFAMILY SSF103473 475 500 1.57E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 SUPERFAMILY SSF103473 9 196 1.57E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 SUPERFAMILY SSF103473 251 423 1.57E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 Pfam PF07690 Major Facilitator Superfamily 19 413 6.2E-54 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 Gene3D G3DSA:1.20.1250.20 13 202 9.7E-35 T 29-03-2018 CKQ55_RS19330 0aba47a76cde35346f9753760ab93675 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 3.7E-216 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CKQ55_RS07505 5c6ce4379821a78e34ecd88ca4fda6e0 86 SUPERFAMILY SSF101744 1 85 1.99E-29 T 29-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 CKQ55_RS07505 5c6ce4379821a78e34ecd88ca4fda6e0 86 Gene3D G3DSA:2.30.30.400 10 83 3.2E-25 T 29-03-2018 CKQ55_RS07505 5c6ce4379821a78e34ecd88ca4fda6e0 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 1.0E-26 T 29-03-2018 IPR009778 Modulator of Rho-dependent transcription termination CKQ55_RS29365 f5be71ab731b6628453261814ed6c760 330 Gene3D G3DSA:3.40.50.300 1 328 1.1E-56 T 29-03-2018 CKQ55_RS29365 f5be71ab731b6628453261814ed6c760 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.7E-15 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS29365 f5be71ab731b6628453261814ed6c760 330 Pfam PF00005 ABC transporter 24 187 7.8E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29365 f5be71ab731b6628453261814ed6c760 330 SMART SM00382 32 237 1.5E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS29365 f5be71ab731b6628453261814ed6c760 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.3E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CKQ55_RS29365 f5be71ab731b6628453261814ed6c760 330 SUPERFAMILY SSF52540 3 263 1.11E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28190 1a6f461bde7f858febbeea2766d162e7 80 Gene3D G3DSA:3.30.910.10 1 77 4.6E-27 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS28190 1a6f461bde7f858febbeea2766d162e7 80 Pfam PF06183 DinI-like family 17 77 5.3E-21 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS28190 1a6f461bde7f858febbeea2766d162e7 80 SUPERFAMILY SSF54857 1 78 3.27E-25 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS29305 bd6d3c85e751bb3a4db65a1a926588ca 76 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 70 7.4E-31 T 29-03-2018 IPR014321 Phage shock protein, PspD CKQ55_RS29305 bd6d3c85e751bb3a4db65a1a926588ca 76 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 70 1.6E-31 T 29-03-2018 IPR014321 Phage shock protein, PspD CKQ55_RS26020 3a094651e61dd3bb692b03c14f8914d6 239 Gene3D G3DSA:3.40.50.2300 1 207 2.2E-29 T 29-03-2018 CKQ55_RS26020 3a094651e61dd3bb692b03c14f8914d6 239 SUPERFAMILY SSF52172 3 133 2.28E-30 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS26020 3a094651e61dd3bb692b03c14f8914d6 239 Pfam PF00072 Response regulator receiver domain 4 117 2.3E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS26020 3a094651e61dd3bb692b03c14f8914d6 239 SMART SM00448 2 117 4.1E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS26020 3a094651e61dd3bb692b03c14f8914d6 239 PIRSF PIRSF006171 1 230 1.0E-78 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CKQ55_RS20590 b1115464e6d3533fff907679fcb1541e 291 Gene3D G3DSA:1.10.3720.10 18 284 1.6E-38 T 29-03-2018 CKQ55_RS20590 b1115464e6d3533fff907679fcb1541e 291 SUPERFAMILY SSF161098 16 268 3.53E-51 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20590 b1115464e6d3533fff907679fcb1541e 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 271 1.7E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS20590 b1115464e6d3533fff907679fcb1541e 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 4.2E-110 T 29-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CKQ55_RS20590 b1115464e6d3533fff907679fcb1541e 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 3.2E-110 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CKQ55_RS23115 cde023c97d33734f10278f89bbb6588e 332 Pfam PF00248 Aldo/keto reductase family 16 311 1.0E-78 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS23115 cde023c97d33734f10278f89bbb6588e 332 Gene3D G3DSA:3.20.20.100 1 329 1.8E-107 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS23115 cde023c97d33734f10278f89bbb6588e 332 SUPERFAMILY SSF51430 1 314 1.44E-102 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.8E-44 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 Gene3D G3DSA:1.10.3860.10 1 411 1.2E-100 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 Pfam PF00375 Sodium:dicarboxylate symporter family 7 403 7.5E-98 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS22520 4c73dc4f135b352e2d66fb70d5ccfad1 424 SUPERFAMILY SSF118215 7 404 6.02E-102 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CKQ55_RS24475 74a331d9b2f681d6a408ef3e133ad948 396 SUPERFAMILY SSF52172 312 384 4.32E-16 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS24475 74a331d9b2f681d6a408ef3e133ad948 396 Pfam PF08376 Nitrate and nitrite sensing 42 277 1.9E-40 T 29-03-2018 IPR013587 Nitrate/nitrite sensing protein CKQ55_RS24475 74a331d9b2f681d6a408ef3e133ad948 396 Pfam PF03861 ANTAR domain 332 384 4.3E-18 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 CKQ55_RS24475 74a331d9b2f681d6a408ef3e133ad948 396 Gene3D G3DSA:1.10.10.10 333 385 4.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS24475 74a331d9b2f681d6a408ef3e133ad948 396 SMART SM01012 329 384 5.2E-21 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 SUPERFAMILY SSF48256 7 424 6.15E-137 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PRINTS PR00143 Citrate synthase signature 165 178 6.9E-38 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PRINTS PR00143 Citrate synthase signature 296 316 6.9E-38 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PRINTS PR00143 Citrate synthase signature 359 375 6.9E-38 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PRINTS PR00143 Citrate synthase signature 241 269 6.9E-38 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PRINTS PR00143 Citrate synthase signature 379 393 6.9E-38 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PRINTS PR00143 Citrate synthase signature 219 234 6.9E-38 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 Gene3D G3DSA:1.10.580.10 26 281 3.8E-79 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 PIRSF PIRSF001369 38 427 3.8E-136 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 Gene3D G3DSA:1.10.230.10 282 379 1.8E-23 T 29-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 6.2E-108 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CKQ55_RS22540 74a44bdc14e11dacdeef21c9b70ce2fb 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 3.6E-176 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 Gene3D G3DSA:1.20.1380.10 76 178 2.2E-43 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 Pfam PF17206 SeqA protein N-terminal domain 1 35 7.1E-24 T 29-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 Pfam PF03925 SeqA protein C-terminal domain 72 180 5.4E-49 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 Gene3D G3DSA:1.10.1220.10 1 37 1.0E-25 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 SUPERFAMILY SSF82808 67 182 5.23E-48 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 SUPERFAMILY SSF47598 1 35 4.45E-14 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 182 44.611 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CKQ55_RS03900 a78f8033d946c050b2d951296a1b0b49 182 PIRSF PIRSF019401 1 182 9.6E-49 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CKQ55_RS01300 426fac4acf775e850fa18315d6292a77 261 Gene3D G3DSA:3.40.190.10 118 240 4.2E-16 T 29-03-2018 CKQ55_RS01300 426fac4acf775e850fa18315d6292a77 261 SMART SM00062 34 254 7.2E-43 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS01300 426fac4acf775e850fa18315d6292a77 261 Gene3D G3DSA:3.40.190.10 25 117 3.9E-23 T 29-03-2018 CKQ55_RS01300 426fac4acf775e850fa18315d6292a77 261 SUPERFAMILY SSF53850 1 253 6.04E-54 T 29-03-2018 CKQ55_RS01300 426fac4acf775e850fa18315d6292a77 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 252 2.1E-46 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS01300 426fac4acf775e850fa18315d6292a77 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 6.8E-91 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 Gene3D G3DSA:3.20.20.70 1 220 2.2E-86 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.1E-96 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 SUPERFAMILY SSF51366 3 218 2.74E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS15080 c77c787c5c2f791005e5016fdaeab754 225 PIRSF PIRSF001461 1 225 1.1E-106 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 SUPERFAMILY SSF51230 82 157 1.1E-25 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 157 4.6E-69 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 86 99 2.9E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 103 117 2.9E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 2.9E-18 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 Pfam PF00364 Biotin-requiring enzyme 84 156 1.5E-24 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 113 130 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CKQ55_RS15615 aac57f870a450017904a1740b5217971 157 Gene3D G3DSA:2.40.50.100 4 157 6.2E-22 T 29-03-2018 CKQ55_RS21770 6e0dc3faac23ed35032356744f244715 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 7.5E-46 T 29-03-2018 IPR007349 Domain of unknown function DUF418 CKQ55_RS02365 15c0ba21a87d701c7583a7333fa24394 222 SUPERFAMILY SSF161098 6 201 9.29E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02365 15c0ba21a87d701c7583a7333fa24394 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 214 4.1E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02365 15c0ba21a87d701c7583a7333fa24394 222 Gene3D G3DSA:1.10.3720.10 1 221 4.0E-28 T 29-03-2018 CKQ55_RS02365 15c0ba21a87d701c7583a7333fa24394 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.0E-16 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS10665 e406686c9cf900ccf1a0abf38990468b 186 SUPERFAMILY SSF49401 29 186 9.94E-15 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS10665 e406686c9cf900ccf1a0abf38990468b 186 Gene3D G3DSA:2.60.40.1090 27 186 1.1E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS26370 e706cb8e1c57a11a18677a2346ed3d2a 130 SMART SM00450 29 127 0.0066 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS26370 e706cb8e1c57a11a18677a2346ed3d2a 130 Gene3D G3DSA:3.40.250.10 10 130 5.0E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS26370 e706cb8e1c57a11a18677a2346ed3d2a 130 ProSitePatterns PS00380 Rhodanese signature 1. 55 66 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CKQ55_RS26370 e706cb8e1c57a11a18677a2346ed3d2a 130 SUPERFAMILY SSF52821 28 129 8.77E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS26370 e706cb8e1c57a11a18677a2346ed3d2a 130 Pfam PF00581 Rhodanese-like domain 38 123 1.2E-6 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS08045 4bea570b168401cfff65c8758696c047 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 8.0E-28 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS08045 4bea570b168401cfff65c8758696c047 183 SUPERFAMILY SSF55846 3 178 2.09E-68 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS08045 4bea570b168401cfff65c8758696c047 183 Gene3D G3DSA:3.40.80.10 1 182 1.0E-52 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS08045 4bea570b168401cfff65c8758696c047 183 SMART SM00644 16 166 1.4E-58 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS17590 300a235086573d1a631113a9bbe15dd4 158 SUPERFAMILY SSF51182 34 156 9.96E-30 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS17590 300a235086573d1a631113a9bbe15dd4 158 Pfam PF07883 Cupin domain 67 127 1.1E-11 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS17590 300a235086573d1a631113a9bbe15dd4 158 Gene3D G3DSA:2.60.120.10 21 158 5.8E-27 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS12020 5f9057d6f4ef160ef342d2a0f28079d1 338 Pfam PF03747 ADP-ribosylglycohydrolase 16 312 6.0E-55 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CKQ55_RS12020 5f9057d6f4ef160ef342d2a0f28079d1 338 SUPERFAMILY SSF101478 8 334 3.92E-62 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CKQ55_RS12020 5f9057d6f4ef160ef342d2a0f28079d1 338 Gene3D G3DSA:1.10.4080.10 6 336 1.4E-61 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CKQ55_RS18965 c0aad52fa4d47f6ac934cef2da38d653 346 Pfam PF05171 Haemin-degrading HemS.ChuX domain 208 339 1.3E-40 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CKQ55_RS18965 c0aad52fa4d47f6ac934cef2da38d653 346 Pfam PF05171 Haemin-degrading HemS.ChuX domain 35 158 1.6E-35 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CKQ55_RS18965 c0aad52fa4d47f6ac934cef2da38d653 346 Gene3D G3DSA:3.40.1570.10 184 343 1.2E-52 T 29-03-2018 CKQ55_RS18965 c0aad52fa4d47f6ac934cef2da38d653 346 SUPERFAMILY SSF144064 10 339 1.67E-125 T 29-03-2018 CKQ55_RS18965 c0aad52fa4d47f6ac934cef2da38d653 346 Gene3D G3DSA:3.40.1570.10 1 171 2.1E-46 T 29-03-2018 CKQ55_RS26645 1d4b8b879f6aa71e631b437b5b0fa55b 348 Pfam PF03060 Nitronate monooxygenase 4 344 1.0E-77 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CKQ55_RS26645 1d4b8b879f6aa71e631b437b5b0fa55b 348 SUPERFAMILY SSF51412 1 73 7.02E-64 T 29-03-2018 CKQ55_RS26645 1d4b8b879f6aa71e631b437b5b0fa55b 348 SUPERFAMILY SSF51412 103 345 7.02E-64 T 29-03-2018 CKQ55_RS26645 1d4b8b879f6aa71e631b437b5b0fa55b 348 Gene3D G3DSA:3.20.20.70 1 346 1.4E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS27095 dd626c786f1602f5e78f1e1611c6370f 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 9.7E-15 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27095 dd626c786f1602f5e78f1e1611c6370f 673 Pfam PF00593 TonB dependent receptor 224 669 1.6E-47 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27095 dd626c786f1602f5e78f1e1611c6370f 673 Gene3D G3DSA:2.170.130.10 20 161 7.4E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27095 dd626c786f1602f5e78f1e1611c6370f 673 Gene3D G3DSA:2.40.170.20 163 672 9.5E-59 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS27095 dd626c786f1602f5e78f1e1611c6370f 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 6.7E-142 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS27095 dd626c786f1602f5e78f1e1611c6370f 673 SUPERFAMILY SSF56935 26 672 4.12E-95 T 29-03-2018 CKQ55_RS02060 5ac08f13ad4df49568432891e7b69861 259 Gene3D G3DSA:3.40.50.620 72 214 2.3E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS02060 5ac08f13ad4df49568432891e7b69861 259 Pfam PF02698 DUF218 domain 80 215 6.8E-26 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CKQ55_RS10850 264f77ffec24445a71a3a740b42674ae 282 PIRSF PIRSF011468 1 282 2.7E-169 T 29-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS10850 264f77ffec24445a71a3a740b42674ae 282 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 1.0E-149 T 29-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CKQ55_RS27065 6f8a2c258148ea734ab6bca57b1352b7 317 SUPERFAMILY SSF53822 33 312 1.63E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS27065 6f8a2c258148ea734ab6bca57b1352b7 317 Pfam PF13407 Periplasmic binding protein domain 43 291 1.8E-51 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS27065 6f8a2c258148ea734ab6bca57b1352b7 317 Gene3D G3DSA:3.40.50.2300 33 141 8.2E-23 T 29-03-2018 CKQ55_RS27065 6f8a2c258148ea734ab6bca57b1352b7 317 Gene3D G3DSA:3.40.50.2300 142 312 4.9E-35 T 29-03-2018 CKQ55_RS20685 fb136bfd57e6e2a1cea19a5bfcf0a4c1 418 SUPERFAMILY SSF103473 7 406 3.92E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20685 fb136bfd57e6e2a1cea19a5bfcf0a4c1 418 Gene3D G3DSA:1.20.1250.20 199 416 5.9E-22 T 29-03-2018 CKQ55_RS20685 fb136bfd57e6e2a1cea19a5bfcf0a4c1 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 1.4E-206 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CKQ55_RS20685 fb136bfd57e6e2a1cea19a5bfcf0a4c1 418 Pfam PF03825 Nucleoside H+ symporter 1 406 1.3E-176 T 29-03-2018 CKQ55_RS20685 fb136bfd57e6e2a1cea19a5bfcf0a4c1 418 Gene3D G3DSA:1.20.1250.20 5 191 2.3E-13 T 29-03-2018 CKQ55_RS24950 fb69b564f7d39d04f9dd63727ec52b9a 328 SUPERFAMILY SSF141523 95 233 7.06E-29 T 29-03-2018 CKQ55_RS24950 fb69b564f7d39d04f9dd63727ec52b9a 328 Gene3D G3DSA:3.10.350.10 40 88 3.8E-7 T 29-03-2018 CKQ55_RS24950 fb69b564f7d39d04f9dd63727ec52b9a 328 Pfam PF01476 LysM domain 43 86 4.1E-7 T 29-03-2018 IPR018392 LysM domain CKQ55_RS24950 fb69b564f7d39d04f9dd63727ec52b9a 328 Gene3D G3DSA:2.40.440.10 93 235 3.3E-30 T 29-03-2018 CKQ55_RS24950 fb69b564f7d39d04f9dd63727ec52b9a 328 Pfam PF03734 L,D-transpeptidase catalytic domain 98 233 3.7E-20 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CKQ55_RS01270 9e58d6e851b2f957cd2b59ec7c86d38d 569 Gene3D G3DSA:1.50.10.20 375 566 7.5E-7 T 29-03-2018 CKQ55_RS01270 9e58d6e851b2f957cd2b59ec7c86d38d 569 Pfam PF06917 Periplasmic pectate lyase 18 569 3.3E-292 T 29-03-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 CKQ55_RS01270 9e58d6e851b2f957cd2b59ec7c86d38d 569 Gene3D G3DSA:1.50.10.10 30 332 4.3E-11 T 29-03-2018 CKQ55_RS01270 9e58d6e851b2f957cd2b59ec7c86d38d 569 SUPERFAMILY SSF48208 228 273 3.71E-5 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS01270 9e58d6e851b2f957cd2b59ec7c86d38d 569 SUPERFAMILY SSF48208 390 516 3.71E-5 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS06360 06d045530ca4f3c57a378f0d17a5dc13 168 Gene3D G3DSA:1.10.3760.10 52 164 7.7E-39 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CKQ55_RS06360 06d045530ca4f3c57a378f0d17a5dc13 168 Pfam PF04608 Phosphatidylglycerophosphatase A 19 159 9.8E-53 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CKQ55_RS06360 06d045530ca4f3c57a378f0d17a5dc13 168 SUPERFAMILY SSF101307 12 159 1.57E-48 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CKQ55_RS06360 06d045530ca4f3c57a378f0d17a5dc13 168 PIRSF PIRSF006162 8 166 1.6E-59 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CKQ55_RS04990 7494cc843e04822b13c3cf471e016330 413 SUPERFAMILY SSF103473 15 410 2.35E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS04990 7494cc843e04822b13c3cf471e016330 413 Gene3D G3DSA:1.20.1250.20 207 413 1.1E-21 T 29-03-2018 CKQ55_RS04990 7494cc843e04822b13c3cf471e016330 413 Pfam PF03825 Nucleoside H+ symporter 21 409 6.0E-97 T 29-03-2018 CKQ55_RS04990 7494cc843e04822b13c3cf471e016330 413 Gene3D G3DSA:1.20.1250.20 9 202 2.8E-11 T 29-03-2018 CKQ55_RS17980 1ed5f1a8539ae512f8f7c7efca71a092 227 Gene3D G3DSA:2.60.40.1090 43 227 0.001 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS17980 1ed5f1a8539ae512f8f7c7efca71a092 227 Pfam PF06551 Protein of unknown function (DUF1120) 36 131 1.2E-10 T 29-03-2018 IPR010546 Protein of unknown function DUF1120 CKQ55_RS17980 1ed5f1a8539ae512f8f7c7efca71a092 227 SUPERFAMILY SSF49401 34 128 5.09E-5 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 5.7E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 283 300 5.7E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 302 320 5.7E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 63 83 5.7E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 325 345 5.7E-25 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 Gene3D G3DSA:3.40.50.150 11 345 5.4E-56 T 29-03-2018 CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 SUPERFAMILY SSF53335 267 345 3.68E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 SUPERFAMILY SSF53335 9 188 3.68E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00340 b57bad08088e58c14e1ee5d9f5f7271c 350 Pfam PF01555 DNA methylase 29 340 1.4E-40 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CKQ55_RS12780 3ac393667b3766cae7fb1e0ae525a4aa 207 SUPERFAMILY SSF52833 21 205 8.3E-47 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS12780 3ac393667b3766cae7fb1e0ae525a4aa 207 Pfam PF01323 DSBA-like thioredoxin domain 40 196 1.2E-28 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CKQ55_RS12780 3ac393667b3766cae7fb1e0ae525a4aa 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CKQ55_RS12780 3ac393667b3766cae7fb1e0ae525a4aa 207 PIRSF PIRSF001488 1 207 8.0E-89 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CKQ55_RS12780 3ac393667b3766cae7fb1e0ae525a4aa 207 Gene3D G3DSA:3.40.30.10 17 207 3.5E-35 T 29-03-2018 CKQ55_RS26555 0f4784fb7f6a0d8231ae7e5d58d1cc25 146 Pfam PF00583 Acetyltransferase (GNAT) family 25 131 4.3E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS26555 0f4784fb7f6a0d8231ae7e5d58d1cc25 146 SUPERFAMILY SSF55729 3 132 2.33E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS26555 0f4784fb7f6a0d8231ae7e5d58d1cc25 146 Gene3D G3DSA:3.40.630.30 2 138 4.9E-31 T 29-03-2018 CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.6E-38 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.6E-38 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.6E-38 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.6E-38 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 Gene3D G3DSA:3.90.45.10 1 169 1.4E-61 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 Pfam PF01327 Polypeptide deformylase 4 152 5.4E-51 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 2.1E-66 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.927 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 SUPERFAMILY SSF56420 3 164 5.5E-61 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS15485 9f5891f359f8be0c29321c9514f24a76 169 PIRSF PIRSF004749 1 168 4.2E-56 T 29-03-2018 IPR023635 Peptide deformylase CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 SUPERFAMILY SSF54211 349 540 1.78E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 9.1E-10 T 29-03-2018 CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 9.1E-10 T 29-03-2018 CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 9.1E-10 T 29-03-2018 CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 Pfam PF13654 AAA domain 115 320 1.7E-22 T 29-03-2018 CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 Gene3D G3DSA:3.30.230.10 326 567 1.4E-30 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS01915 83a43190379fde3cc04bc8c0096ae928 585 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 523 5.8E-10 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CKQ55_RS09945 2d8c3af76b572e18af04416db5de20d2 294 Pfam PF01261 Xylose isomerase-like TIM barrel 20 238 3.9E-36 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS09945 2d8c3af76b572e18af04416db5de20d2 294 Gene3D G3DSA:3.20.20.150 1 258 2.7E-36 T 29-03-2018 CKQ55_RS09945 2d8c3af76b572e18af04416db5de20d2 294 SUPERFAMILY SSF51658 9 252 5.94E-42 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 29-03-2018 CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 2.3E-67 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.8E-74 T 29-03-2018 IPR000150 Cof family GO:0016787 CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 29-03-2018 CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 3.7E-30 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 Gene3D G3DSA:3.40.50.1000 1 270 2.4E-49 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS13100 9008f3aadd8d7a31e56b5d23fe0dc1eb 270 SUPERFAMILY SSF56784 1 269 4.2E-76 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS10265 0b135fb668b093d9c1738b3e53c3ee05 318 SUPERFAMILY SSF53822 23 310 1.73E-71 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS10265 0b135fb668b093d9c1738b3e53c3ee05 318 Pfam PF13407 Periplasmic binding protein domain 26 274 5.1E-44 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS10265 0b135fb668b093d9c1738b3e53c3ee05 318 Gene3D G3DSA:3.40.50.2300 140 301 3.7E-31 T 29-03-2018 CKQ55_RS10265 0b135fb668b093d9c1738b3e53c3ee05 318 Gene3D G3DSA:3.40.50.2300 22 139 2.6E-22 T 29-03-2018 CKQ55_RS13765 7466e6d86b219340997cf49afc088177 260 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 57 213 3.4E-14 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CKQ55_RS13765 7466e6d86b219340997cf49afc088177 260 Gene3D G3DSA:3.40.50.2000 74 254 2.5E-19 T 29-03-2018 CKQ55_RS13765 7466e6d86b219340997cf49afc088177 260 SUPERFAMILY SSF53756 4 248 1.37E-29 T 29-03-2018 CKQ55_RS13765 7466e6d86b219340997cf49afc088177 260 Gene3D G3DSA:3.40.50.2000 2 73 7.6E-7 T 29-03-2018 CKQ55_RS24000 ddeeb0a952c4f285bbb0ef169e53f512 412 SUPERFAMILY SSF48230 79 353 4.49E-48 T 29-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CKQ55_RS24000 ddeeb0a952c4f285bbb0ef169e53f512 412 Pfam PF05426 Alginate lyase 72 347 8.3E-74 T 29-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 CKQ55_RS24000 ddeeb0a952c4f285bbb0ef169e53f512 412 Gene3D G3DSA:1.50.10.100 74 387 2.7E-52 T 29-03-2018 CKQ55_RS15750 d224e4301438aa351ade7c0581533761 299 Pfam PF05681 Fumarate hydratase (Fumerase) 13 281 2.7E-78 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS15750 d224e4301438aa351ade7c0581533761 299 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 282 7.9E-94 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CKQ55_RS15490 ec45f37a2fb379f453f0146debd15f77 374 Gene3D G3DSA:3.40.50.450 106 251 9.2E-37 T 29-03-2018 CKQ55_RS15490 ec45f37a2fb379f453f0146debd15f77 374 SUPERFAMILY SSF102405 76 282 5.19E-39 T 29-03-2018 CKQ55_RS15490 ec45f37a2fb379f453f0146debd15f77 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 282 7.5E-78 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CKQ55_RS15490 ec45f37a2fb379f453f0146debd15f77 374 Pfam PF02481 DNA recombination-mediator protein A 67 274 2.0E-72 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CKQ55_RS15490 ec45f37a2fb379f453f0146debd15f77 374 Gene3D G3DSA:1.10.10.10 272 362 1.0E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 PIRSF PIRSF002181 1 142 4.9E-51 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 Pfam PF00572 Ribosomal protein L13 15 138 5.0E-57 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.433 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 Gene3D G3DSA:3.90.1180.10 1 142 9.8E-63 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.3E-67 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15800 d68051d119347db96760e9cf445f3760 142 SUPERFAMILY SSF52161 1 140 8.5E-61 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CKQ55_RS04375 115ab6eaa7d045b56490185ba41facb1 332 SUPERFAMILY SSF81345 24 242 1.7E-5 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS04375 115ab6eaa7d045b56490185ba41facb1 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 1.4E-35 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04375 115ab6eaa7d045b56490185ba41facb1 332 Gene3D G3DSA:1.10.3470.10 44 331 7.0E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS03175 2fe33d0bd715bce0535d11d2c7c815ac 322 SUPERFAMILY SSF47648 7 72 1.7E-14 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS03175 2fe33d0bd715bce0535d11d2c7c815ac 322 SUPERFAMILY SSF52418 78 322 2.35E-45 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS03175 2fe33d0bd715bce0535d11d2c7c815ac 322 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 5.6E-10 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS03175 2fe33d0bd715bce0535d11d2c7c815ac 322 Gene3D G3DSA:3.40.1030.10 81 322 6.8E-39 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS03175 2fe33d0bd715bce0535d11d2c7c815ac 322 Gene3D G3DSA:1.20.970.10 1 71 2.5E-15 T 29-03-2018 CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 Pfam PF00106 short chain dehydrogenase 3 191 1.8E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.4E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.4E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.4E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.4E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.4E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.2E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 177 0.002 T 29-03-2018 CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 Gene3D G3DSA:3.40.50.720 2 228 9.4E-53 T 29-03-2018 CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 SUPERFAMILY SSF51735 3 253 2.23E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS05785 50b6e55844d934e10de517a3b3960af5 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS23785 088a9ff7fb432977978fb1efb6fe4e43 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 2.1E-38 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS23785 088a9ff7fb432977978fb1efb6fe4e43 76 SUPERFAMILY SSF46575 1 76 5.49E-35 T 29-03-2018 CKQ55_RS23785 088a9ff7fb432977978fb1efb6fe4e43 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 5.0E-33 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS23785 088a9ff7fb432977978fb1efb6fe4e43 76 Gene3D G3DSA:1.20.58.250 3 65 2.7E-30 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CKQ55_RS21895 ee1d1d29b82b8c42554265bc05942ad8 315 SUPERFAMILY SSF56601 3 277 9.36E-59 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS21895 ee1d1d29b82b8c42554265bc05942ad8 315 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 261 3.2E-82 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CKQ55_RS21895 ee1d1d29b82b8c42554265bc05942ad8 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 3.3E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS21895 ee1d1d29b82b8c42554265bc05942ad8 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 3.3E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS21895 ee1d1d29b82b8c42554265bc05942ad8 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 3.3E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CKQ55_RS21895 ee1d1d29b82b8c42554265bc05942ad8 315 Gene3D G3DSA:3.40.710.10 17 312 4.8E-41 T 29-03-2018 CKQ55_RS00970 726525ce95a77ca257a83d43571da401 245 Pfam PF02811 PHP domain 5 125 1.6E-8 T 29-03-2018 IPR004013 PHP domain GO:0003824 CKQ55_RS00970 726525ce95a77ca257a83d43571da401 245 SUPERFAMILY SSF89550 3 239 6.93E-63 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CKQ55_RS00970 726525ce95a77ca257a83d43571da401 245 Gene3D G3DSA:3.20.20.140 1 245 9.7E-39 T 29-03-2018 CKQ55_RS00970 726525ce95a77ca257a83d43571da401 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 50.916 T 29-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 CKQ55_RS00970 726525ce95a77ca257a83d43571da401 245 SMART SM00481 4 78 3.7E-19 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CKQ55_RS07945 5b4012e6a603e3eef68b9fd263e70e02 587 Gene3D G3DSA:3.10.50.40 440 586 1.4E-16 T 29-03-2018 CKQ55_RS07945 5b4012e6a603e3eef68b9fd263e70e02 587 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 491 574 2.8E-6 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CKQ55_RS07945 5b4012e6a603e3eef68b9fd263e70e02 587 SUPERFAMILY SSF54534 381 576 7.66E-18 T 29-03-2018 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 1.8E-39 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 Gene3D G3DSA:1.20.1300.10 1 129 4.2E-27 T 29-03-2018 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 PIRSF PIRSF000178 1 129 3.2E-32 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 SUPERFAMILY SSF81343 1 129 6.21E-37 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS03750 f62a7266a3f50ee726b0f180ce458b9c 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 8.9E-30 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS14045 74df14866ba659f71273332bc6fa72ba 101 Pfam PF13983 YsaB-like lipoprotein 27 101 1.4E-41 T 29-03-2018 IPR025728 YsaB-like lipoprotein CKQ55_RS14570 6d04f0e0af2ea6faae781d77ae90f0b8 379 PIRSF PIRSF000390 1 379 9.8E-112 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CKQ55_RS14570 6d04f0e0af2ea6faae781d77ae90f0b8 379 SUPERFAMILY SSF53383 4 375 3.85E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS14570 6d04f0e0af2ea6faae781d77ae90f0b8 379 Gene3D G3DSA:3.90.1150.10 246 378 3.8E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS14570 6d04f0e0af2ea6faae781d77ae90f0b8 379 Gene3D G3DSA:3.40.640.10 3 245 9.0E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS14570 6d04f0e0af2ea6faae781d77ae90f0b8 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 373 3.5E-130 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CKQ55_RS14570 6d04f0e0af2ea6faae781d77ae90f0b8 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 71.703 T 29-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 CKQ55_RS02790 faa860c15083faa5b020a467b0cde766 530 Pfam PF03237 Terminase-like family 113 284 3.2E-6 T 29-03-2018 CKQ55_RS13825 a739701105535fd92d25b66461318aed 143 Gene3D G3DSA:3.40.250.10 28 143 1.8E-24 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS13825 a739701105535fd92d25b66461318aed 143 SMART SM00450 40 138 2.0E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS13825 a739701105535fd92d25b66461318aed 143 SUPERFAMILY SSF52821 15 142 4.32E-31 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS13825 a739701105535fd92d25b66461318aed 143 Pfam PF00581 Rhodanese-like domain 43 133 7.2E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CKQ55_RS09240 dc496eae225880ed57b8ecfe05e88912 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 53 1.2E-13 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 PRINTS PR00107 Phosphocarrier protein signature 212 229 4.7E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 PRINTS PR00107 Phosphocarrier protein signature 197 212 4.7E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 PRINTS PR00107 Phosphocarrier protein signature 169 185 4.7E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 Gene3D G3DSA:3.30.1340.10 157 241 8.1E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 SUPERFAMILY SSF55804 3 139 2.35E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 169 176 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 159 240 7.4E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 SUPERFAMILY SSF55594 160 246 1.44E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 46 62 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 Pfam PF00381 PTS HPr component phosphorylation site 159 240 3.1E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 Gene3D G3DSA:3.40.930.10 1 141 1.7E-30 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS16245 127331f596616149ed82d9bb7b886831 271 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 5.4E-30 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS05735 59732ebc00b42dab8400d85d8650afb6 240 Gene3D G3DSA:3.60.21.10 1 230 2.1E-24 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS05735 59732ebc00b42dab8400d85d8650afb6 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 135.529 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CKQ55_RS05735 59732ebc00b42dab8400d85d8650afb6 240 Pfam PF00149 Calcineurin-like phosphoesterase 4 199 2.6E-10 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS05735 59732ebc00b42dab8400d85d8650afb6 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 1.9E-114 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CKQ55_RS05735 59732ebc00b42dab8400d85d8650afb6 240 SUPERFAMILY SSF56300 4 239 5.35E-31 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS00335 e09cd436d3d483942979399d4392a5f3 185 Pfam PF13274 Protein of unknown function (DUF4065) 27 139 4.4E-23 T 29-03-2018 IPR025272 Domain of unknown function DUF4065 CKQ55_RS03905 22aede65c0b6d9611987b9490082d0b6 257 SUPERFAMILY SSF53474 15 253 1.73E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS03905 22aede65c0b6d9611987b9490082d0b6 257 Gene3D G3DSA:3.40.50.1820 1 254 3.3E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS03905 22aede65c0b6d9611987b9490082d0b6 257 Pfam PF12697 Alpha/beta hydrolase family 19 247 4.4E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS19400 5c58c9be66fa8e07686ae796afb598ee 108 Gene3D G3DSA:1.10.287.1060 3 86 8.6E-6 T 29-03-2018 CKQ55_RS19400 5c58c9be66fa8e07686ae796afb598ee 108 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 8.3E-27 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CKQ55_RS25525 f2e0dc78b897cc0a28c981f4d956236a 290 Pfam PF05067 Manganese containing catalase 1 287 3.5E-92 T 29-03-2018 IPR007760 Manganese catalase CKQ55_RS25525 f2e0dc78b897cc0a28c981f4d956236a 290 Gene3D G3DSA:1.20.1260.10 1 200 4.1E-63 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS25525 f2e0dc78b897cc0a28c981f4d956236a 290 SUPERFAMILY SSF47240 1 286 1.48E-82 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 1.9E-237 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 1.8E-89 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 Gene3D G3DSA:3.40.710.10 250 618 1.4E-82 T 29-03-2018 CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 SUPERFAMILY SSF56519 56 253 3.92E-53 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 2.0E-46 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 SUPERFAMILY SSF56601 254 611 2.73E-92 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS04140 536c7d9c7672bfd998a4503c7e39bb8f 633 Gene3D G3DSA:3.90.1310.10 33 249 8.3E-54 T 29-03-2018 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 Gene3D G3DSA:3.40.640.10 60 289 1.9E-76 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 Pfam PF00202 Aminotransferase class-III 26 399 2.9E-138 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 SUPERFAMILY SSF53383 20 400 2.45E-126 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.518 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 2.4E-151 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 PIRSF PIRSF000521 174 403 2.1E-34 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 PIRSF PIRSF000521 28 157 5.3E-7 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 403 6.8E-204 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CKQ55_RS15145 ea9cd5c0e413612b209c52013438aa30 406 Gene3D G3DSA:3.90.1150.10 290 404 2.6E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS06635 71b32398dfec9281085542061040d1a8 177 Pfam PF00857 Isochorismatase family 7 141 1.3E-29 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS06635 71b32398dfec9281085542061040d1a8 177 SUPERFAMILY SSF52499 3 150 7.72E-38 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS06635 71b32398dfec9281085542061040d1a8 177 Gene3D G3DSA:3.40.50.850 1 176 1.1E-36 T 29-03-2018 CKQ55_RS27350 62e50dbab54ea9c4c82c340ae21d17fa 511 Pfam PF12792 CSS motif domain associated with EAL 37 210 3.4E-27 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CKQ55_RS27350 62e50dbab54ea9c4c82c340ae21d17fa 511 Pfam PF00563 EAL domain 257 491 1.8E-66 T 29-03-2018 IPR001633 EAL domain CKQ55_RS27350 62e50dbab54ea9c4c82c340ae21d17fa 511 SUPERFAMILY SSF141868 257 502 1.28E-75 T 29-03-2018 IPR001633 EAL domain CKQ55_RS27350 62e50dbab54ea9c4c82c340ae21d17fa 511 SMART SM00052 250 496 9.0E-85 T 29-03-2018 IPR001633 EAL domain CKQ55_RS27350 62e50dbab54ea9c4c82c340ae21d17fa 511 Gene3D G3DSA:3.20.20.450 249 507 2.4E-80 T 29-03-2018 IPR001633 EAL domain CKQ55_RS17110 eb5986ad80cd8b36e092e6d4cfa13499 328 Gene3D G3DSA:3.40.190.10 146 326 2.5E-5 T 29-03-2018 CKQ55_RS17110 eb5986ad80cd8b36e092e6d4cfa13499 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 283 3.0E-86 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CKQ55_RS17110 eb5986ad80cd8b36e092e6d4cfa13499 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 1.4E-83 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CKQ55_RS17110 eb5986ad80cd8b36e092e6d4cfa13499 328 SUPERFAMILY SSF53850 156 270 4.26E-5 T 29-03-2018 CKQ55_RS17110 eb5986ad80cd8b36e092e6d4cfa13499 328 SUPERFAMILY SSF53850 75 121 4.26E-5 T 29-03-2018 CKQ55_RS17110 eb5986ad80cd8b36e092e6d4cfa13499 328 PIRSF PIRSF006470 1 328 2.4E-88 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CKQ55_RS30030 a621cb8400381dbff99d8fd426a8e065 300 Gene3D G3DSA:3.40.50.1980 138 299 2.3E-30 T 29-03-2018 CKQ55_RS30030 a621cb8400381dbff99d8fd426a8e065 300 Gene3D G3DSA:3.40.50.1980 18 137 2.2E-26 T 29-03-2018 CKQ55_RS30030 a621cb8400381dbff99d8fd426a8e065 300 SUPERFAMILY SSF53807 35 291 7.06E-55 T 29-03-2018 CKQ55_RS30030 a621cb8400381dbff99d8fd426a8e065 300 Pfam PF01497 Periplasmic binding protein 40 268 1.3E-26 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS01895 5b89b66db7f97cc593d791549c7ddb08 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 9.5E-95 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CKQ55_RS01895 5b89b66db7f97cc593d791549c7ddb08 169 Gene3D G3DSA:3.40.50.300 29 148 4.3E-19 T 29-03-2018 CKQ55_RS01895 5b89b66db7f97cc593d791549c7ddb08 169 SUPERFAMILY SSF52540 31 147 3.72E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01895 5b89b66db7f97cc593d791549c7ddb08 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 43.327 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CKQ55_RS01895 5b89b66db7f97cc593d791549c7ddb08 169 Pfam PF03846 Cell division inhibitor SulA 6 119 1.8E-52 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CKQ55_RS01895 5b89b66db7f97cc593d791549c7ddb08 169 PIRSF PIRSF003093 1 169 1.0E-83 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CKQ55_RS03250 20176314ab1f8cc58d774bbdeaba7283 249 Gene3D G3DSA:3.60.10.10 2 249 8.6E-34 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS03250 20176314ab1f8cc58d774bbdeaba7283 249 SUPERFAMILY SSF56219 4 247 5.23E-51 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS03250 20176314ab1f8cc58d774bbdeaba7283 249 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 240 7.8E-16 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CKQ55_RS02125 cee9b17265088be65ff7cb4f7c290787 230 Gene3D G3DSA:3.30.240.20 97 166 5.8E-19 T 29-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CKQ55_RS02125 cee9b17265088be65ff7cb4f7c290787 230 Pfam PF04239 Protein of unknown function (DUF421) 104 168 6.8E-15 T 29-03-2018 IPR007353 Protein of unknown function DUF421 CKQ55_RS23060 7d3fdcbc7273def3968330bfcfbc25ca 170 Gene3D G3DSA:2.60.40.1090 21 170 2.5E-34 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23060 7d3fdcbc7273def3968330bfcfbc25ca 170 SUPERFAMILY SSF49401 22 170 7.95E-36 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS23060 7d3fdcbc7273def3968330bfcfbc25ca 170 Pfam PF00419 Fimbrial protein 25 170 4.9E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS08370 88c802989aff6a24827423b808c69c30 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 3 321 1.0E-129 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS08370 88c802989aff6a24827423b808c69c30 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 322 34.979 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS08370 88c802989aff6a24827423b808c69c30 326 Gene3D G3DSA:3.40.718.10 1 326 8.3E-132 T 29-03-2018 CKQ55_RS08370 88c802989aff6a24827423b808c69c30 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 318 1.7E-107 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS08370 88c802989aff6a24827423b808c69c30 326 SUPERFAMILY SSF53659 3 324 7.52E-116 T 29-03-2018 CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.3E-73 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 Pfam PF01895 PhoU domain 27 111 1.2E-21 T 29-03-2018 IPR026022 PhoU domain CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 Pfam PF01895 PhoU domain 128 213 2.0E-17 T 29-03-2018 IPR026022 PhoU domain CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 Gene3D G3DSA:1.20.58.220 120 238 7.5E-26 T 29-03-2018 CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 SUPERFAMILY SSF109755 13 229 2.3E-70 T 29-03-2018 CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 PIRSF PIRSF003107 7 226 2.2E-67 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CKQ55_RS12980 ec508ccf351b9675036b453fca98b14f 241 Gene3D G3DSA:1.20.58.220 6 119 6.2E-28 T 29-03-2018 CKQ55_RS31645 6d05d830f47643cef39b451720771dd8 613 Gene3D G3DSA:3.40.50.300 92 569 4.3E-34 T 29-03-2018 CKQ55_RS31645 6d05d830f47643cef39b451720771dd8 613 SUPERFAMILY SSF52540 98 566 2.81E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31645 6d05d830f47643cef39b451720771dd8 613 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 104 574 3.5E-145 T 29-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CKQ55_RS25305 92ee7c8f2e4e32f6cb193b46662611be 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 320 1.2E-64 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CKQ55_RS25305 92ee7c8f2e4e32f6cb193b46662611be 361 Pfam PF06996 Type VI secretion, TssG 20 320 1.1E-70 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 SUPERFAMILY SSF46785 1306 1370 5.44E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 Gene3D G3DSA:3.40.50.300 671 1244 9.9E-55 T 29-03-2018 CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 SUPERFAMILY SSF52540 966 1278 8.18E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 SMART SM00843 1306 1371 3.6E-42 T 29-03-2018 IPR018541 FtsK gamma domain CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 Gene3D G3DSA:1.10.10.10 1308 1362 5.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 7.8E-42 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 Pfam PF09397 Ftsk gamma domain 1308 1368 4.1E-28 T 29-03-2018 IPR018541 FtsK gamma domain CKQ55_RS02215 de2097c65ed31b42dd7b5b842cc1834e 1373 Pfam PF01580 FtsK/SpoIIIE family 992 1205 1.4E-74 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CKQ55_RS01305 17ff311b508a64db42f742ff103b9a61 279 SUPERFAMILY SSF53697 94 248 2.02E-10 T 29-03-2018 CKQ55_RS01305 17ff311b508a64db42f742ff103b9a61 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 72 1.0E-12 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS01305 17ff311b508a64db42f742ff103b9a61 279 SUPERFAMILY SSF46689 2 79 2.69E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS01305 17ff311b508a64db42f742ff103b9a61 279 Gene3D G3DSA:3.40.50.10490 120 256 4.0E-7 T 29-03-2018 CKQ55_RS01305 17ff311b508a64db42f742ff103b9a61 279 Gene3D G3DSA:1.10.10.10 1 119 2.7E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01305 17ff311b508a64db42f742ff103b9a61 279 Pfam PF01380 SIS domain 124 230 2.2E-6 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS15715 c4e4088f243fce4e11eab04ba9441af7 88 Gene3D G3DSA:3.30.1660.10 23 88 7.9E-27 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS15715 c4e4088f243fce4e11eab04ba9441af7 88 SUPERFAMILY SSF159871 5 88 6.28E-25 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS15715 c4e4088f243fce4e11eab04ba9441af7 88 Pfam PF07338 Protein of unknown function (DUF1471) 35 88 7.9E-24 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS05860 47ce21f5e9c99864c10f7fd6272fe6e8 264 Pfam PF01963 TraB family 30 263 3.9E-36 T 29-03-2018 IPR002816 Pheromone shutdown, TraB CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 Gene3D G3DSA:3.30.420.150 125 305 1.4E-33 T 29-03-2018 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 SUPERFAMILY SSF53067 13 133 7.77E-36 T 29-03-2018 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 SUPERFAMILY SSF53067 137 310 8.64E-47 T 29-03-2018 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 Gene3D G3DSA:3.30.420.40 1 124 1.5E-37 T 29-03-2018 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 SUPERFAMILY SSF109604 313 506 1.49E-55 T 29-03-2018 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 1.2E-96 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 PIRSF PIRSF001267 3 506 1.4E-203 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CKQ55_RS20290 534f73b80bf3512fd39232d5567b369a 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 1.3E-98 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CKQ55_RS24735 000c68fb01a01e05fe2ec4b816f67f03 523 Pfam PF07508 Recombinase 186 280 2.6E-14 T 29-03-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CKQ55_RS24735 000c68fb01a01e05fe2ec4b816f67f03 523 SUPERFAMILY SSF53041 4 159 2.75E-15 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS24735 000c68fb01a01e05fe2ec4b816f67f03 523 Pfam PF13408 Recombinase zinc beta ribbon domain 296 349 1.1E-5 T 29-03-2018 IPR025827 Recombinase zinc beta ribbon domain CKQ55_RS24735 000c68fb01a01e05fe2ec4b816f67f03 523 Pfam PF00239 Resolvase, N terminal domain 4 160 6.5E-19 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS24735 000c68fb01a01e05fe2ec4b816f67f03 523 SMART SM00857 4 167 2.5E-21 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CKQ55_RS24735 000c68fb01a01e05fe2ec4b816f67f03 523 Gene3D G3DSA:3.40.50.1390 1 172 7.5E-28 T 29-03-2018 CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 SUPERFAMILY SSF52540 5 228 3.64E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 SMART SM00382 34 228 1.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 Pfam PF02687 FtsX-like permease family 553 640 1.4E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 Pfam PF12704 MacB-like periplasmic core domain 273 489 7.6E-31 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 Pfam PF00005 ABC transporter 25 173 7.7E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS18865 19ef8da8afbae7896516fa889eeeda53 647 Gene3D G3DSA:3.40.50.300 2 234 9.8E-64 T 29-03-2018 CKQ55_RS22855 8d998b27976a15afd0be016aae9da0a0 220 SUPERFAMILY SSF53146 92 208 3.66E-27 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CKQ55_RS22855 8d998b27976a15afd0be016aae9da0a0 220 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 103 192 1.2E-13 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CKQ55_RS22855 8d998b27976a15afd0be016aae9da0a0 220 Gene3D G3DSA:3.30.420.130 91 209 5.6E-21 T 29-03-2018 CKQ55_RS11950 be69967065962c45186a88f860c09475 448 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 40.43 T 29-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CKQ55_RS11950 be69967065962c45186a88f860c09475 448 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 443 1.1E-252 T 29-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CKQ55_RS01125 686d1624de5adeb60f9b0d39866e4916 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.0E-10 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat CKQ55_RS01125 686d1624de5adeb60f9b0d39866e4916 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 1.0E-9 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat CKQ55_RS15945 916c30eaa4af195fbdafc39c26a9bc4b 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 1.6E-98 T 29-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CKQ55_RS15945 916c30eaa4af195fbdafc39c26a9bc4b 325 Pfam PF01699 Sodium/calcium exchanger protein 4 144 2.1E-28 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CKQ55_RS15945 916c30eaa4af195fbdafc39c26a9bc4b 325 Pfam PF01699 Sodium/calcium exchanger protein 176 317 2.1E-26 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 SMART SM00825 Beta-ketoacyl synthase 5 408 1.4E-10 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 SUPERFAMILY SSF53901 3 252 6.67E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 364 6.1E-26 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 1.1E-41 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 SUPERFAMILY SSF53901 215 409 6.58E-58 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 Gene3D G3DSA:3.40.47.10 5 260 1.2E-55 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS14610 cd88d0dff623f52a8accbd9c53eef473 409 Gene3D G3DSA:3.40.47.10 261 408 8.4E-34 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CKQ55_RS09995 a6341f04c92ca4826795831d143b8bdb 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 2.9E-116 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CKQ55_RS09995 a6341f04c92ca4826795831d143b8bdb 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 3.4E-72 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CKQ55_RS02840 902dcb9d3b9e9a34ad2968fe1d94ec2a 180 Pfam PF05838 Glycosyl hydrolase 108 8 90 4.2E-26 T 29-03-2018 IPR008565 Protein of unknown function DUF847 CKQ55_RS02840 902dcb9d3b9e9a34ad2968fe1d94ec2a 180 Pfam PF09374 Predicted Peptidoglycan domain 94 178 3.8E-22 T 29-03-2018 IPR018537 Peptidoglycan binding domain CKQ55_RS02840 902dcb9d3b9e9a34ad2968fe1d94ec2a 180 SUPERFAMILY SSF53955 2 175 2.56E-45 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS02840 902dcb9d3b9e9a34ad2968fe1d94ec2a 180 Gene3D G3DSA:1.20.141.10 1 180 7.3E-44 T 29-03-2018 CKQ55_RS08360 f6b2af515db171900c7074d49afda1b3 780 Pfam PF03968 OstA-like protein 53 194 5.2E-29 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CKQ55_RS08360 f6b2af515db171900c7074d49afda1b3 780 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 759 21.621 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CKQ55_RS08360 f6b2af515db171900c7074d49afda1b3 780 Gene3D G3DSA:2.60.450.10 43 210 9.0E-17 T 29-03-2018 CKQ55_RS08360 f6b2af515db171900c7074d49afda1b3 780 Pfam PF04453 Organic solvent tolerance protein 309 693 9.0E-109 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CKQ55_RS07030 a5cdb1fb3b0eacf718e7eaf65c631838 226 SUPERFAMILY SSF161098 15 206 3.01E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS07030 a5cdb1fb3b0eacf718e7eaf65c631838 226 Gene3D G3DSA:1.10.3720.10 3 208 3.1E-27 T 29-03-2018 CKQ55_RS07030 a5cdb1fb3b0eacf718e7eaf65c631838 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 214 8.3E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 Gene3D G3DSA:3.90.120.10 379 635 3.7E-6 T 29-03-2018 CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 Gene3D G3DSA:3.40.50.150 4 234 1.4E-39 T 29-03-2018 CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 SUPERFAMILY SSF53335 182 262 6.09E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 SUPERFAMILY SSF53335 589 645 6.09E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 SUPERFAMILY SSF53335 4 150 6.09E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 SUPERFAMILY SSF53335 296 362 6.09E-62 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 Pfam PF00145 C-5 cytosine-specific DNA methylase 587 645 1.7E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS00375 73b8815c96fe5cdc51d860abec59a644 660 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 121 3.2E-6 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 218 1.1E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 SUPERFAMILY SSF161098 16 212 4.84E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 SUPERFAMILY SSF52540 262 495 7.32E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 115 2.9E-18 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 Gene3D G3DSA:3.40.50.300 257 502 6.7E-68 T 29-03-2018 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 Gene3D G3DSA:1.10.3720.10 1 226 3.5E-33 T 29-03-2018 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 Pfam PF00005 ABC transporter 276 429 5.7E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS19565 f06c459a7ac3078054cb5a02fe9c668a 506 SMART SM00382 285 477 3.1E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS20665 ad4e4e5f6c2b5cb72c1844153571813d 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 68 6.0E-29 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CKQ55_RS20665 ad4e4e5f6c2b5cb72c1844153571813d 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 3.0E-22 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CKQ55_RS18385 9c52951d24c4e8a57cb714f480a1dabe 181 SUPERFAMILY SSF52540 2 181 1.16E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18385 9c52951d24c4e8a57cb714f480a1dabe 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 1.1E-62 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS18385 9c52951d24c4e8a57cb714f480a1dabe 181 Gene3D G3DSA:3.40.50.300 2 181 1.0E-63 T 29-03-2018 CKQ55_RS18385 9c52951d24c4e8a57cb714f480a1dabe 181 PIRSF PIRSF006135 1 181 2.9E-63 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 Gene3D G3DSA:3.40.50.300 201 678 5.5E-93 T 29-03-2018 CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.4E-75 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 Gene3D G3DSA:1.10.10.160 127 187 6.0E-20 T 29-03-2018 CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 4.9E-76 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 SUPERFAMILY SSF52540 7 642 5.87E-181 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 29-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CKQ55_RS11840 bfe34e1e1fb2e0b50f8221bb4dd03b2f 720 Gene3D G3DSA:3.40.50.300 5 126 1.8E-27 T 29-03-2018 CKQ55_RS10050 30f3ff58d8797f9c413ae689b47422c9 150 SUPERFAMILY SSF51197 1 149 8.51E-43 T 29-03-2018 CKQ55_RS10050 30f3ff58d8797f9c413ae689b47422c9 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 150 3.0E-57 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS10050 30f3ff58d8797f9c413ae689b47422c9 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 7.2E-45 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS10050 30f3ff58d8797f9c413ae689b47422c9 150 Gene3D G3DSA:2.60.120.370 1 150 3.7E-54 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS14495 30d00a414ef81383ed2c10fc1bb074d3 464 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 20 459 2.0E-109 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS14495 30d00a414ef81383ed2c10fc1bb074d3 464 PIRSF PIRSF002457 1 464 9.2E-111 T 29-03-2018 IPR030676 Citrate carrier CitT-related CKQ55_RS14495 30d00a414ef81383ed2c10fc1bb074d3 464 Pfam PF00939 Sodium:sulfate symporter transmembrane region 3 463 2.6E-119 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS09825 89039af924f0b04a2c70a343037221c1 507 Pfam PF08388 Group II intron, maturase-specific domain 373 426 5.9E-11 T 29-03-2018 IPR013597 Group II intron, maturase-specific CKQ55_RS09825 89039af924f0b04a2c70a343037221c1 507 SUPERFAMILY SSF56672 49 246 1.88E-49 T 29-03-2018 CKQ55_RS09825 89039af924f0b04a2c70a343037221c1 507 SUPERFAMILY SSF56672 273 343 1.88E-49 T 29-03-2018 CKQ55_RS09825 89039af924f0b04a2c70a343037221c1 507 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 34 423 1.3E-103 T 29-03-2018 IPR030931 Group II intron reverse transcriptase/maturase CKQ55_RS09825 89039af924f0b04a2c70a343037221c1 507 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 91 337 1.4E-37 T 29-03-2018 IPR000477 Reverse transcriptase domain CKQ55_RS09825 89039af924f0b04a2c70a343037221c1 507 Gene3D G3DSA:3.30.70.270 123 337 2.0E-31 T 29-03-2018 CKQ55_RS06650 ec0bc56e0d3b978d36ae8903fcc3afab 163 SMART SM01321 9 119 6.7E-27 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS06650 ec0bc56e0d3b978d36ae8903fcc3afab 163 Gene3D G3DSA:3.30.70.1290 1 125 1.8E-27 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS06650 ec0bc56e0d3b978d36ae8903fcc3afab 163 SUPERFAMILY SSF143422 1 125 2.62E-28 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS01510 882dadfcc87c2cb21e2eed73a8d1c8f8 188 Pfam PF06821 Serine hydrolase 15 176 1.3E-52 T 29-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CKQ55_RS01510 882dadfcc87c2cb21e2eed73a8d1c8f8 188 SUPERFAMILY SSF53474 13 179 5.81E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS01510 882dadfcc87c2cb21e2eed73a8d1c8f8 188 Gene3D G3DSA:3.40.50.1820 3 182 1.5E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 Gene3D G3DSA:2.170.130.10 33 181 5.7E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 SUPERFAMILY SSF56935 42 762 1.44E-120 T 29-03-2018 CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 Pfam PF00593 TonB dependent receptor 262 760 4.6E-56 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 169 2.0E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 762 1.1E-81 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 Gene3D G3DSA:2.40.170.20 183 762 2.6E-85 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CKQ55_RS03155 80c5ba78a93431a5be897f07a20088aa 762 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 29-03-2018 IPR010916 TonB box, conserved site CKQ55_RS31840 a8d51483dcb7fe8362f2a3ed6d2efc43 50 SUPERFAMILY SSF47413 2 43 1.17E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS31840 a8d51483dcb7fe8362f2a3ed6d2efc43 50 Gene3D G3DSA:1.10.260.40 3 45 2.9E-4 T 29-03-2018 CKQ55_RS17540 f060975c63abb7c2427fbbd542873a67 263 Gene3D G3DSA:3.40.50.720 2 224 5.3E-30 T 29-03-2018 CKQ55_RS17540 f060975c63abb7c2427fbbd542873a67 263 Pfam PF13460 NAD(P)H-binding 7 194 1.0E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS17540 f060975c63abb7c2427fbbd542873a67 263 SUPERFAMILY SSF51735 1 221 1.24E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS18440 a441f4a75542232bc3e78ad00f45711c 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 3.4E-23 T 29-03-2018 IPR006696 Protein of unknown function DUF423 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 PRINTS PR00990 Ribokinase signature 34 53 7.8E-29 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 PRINTS PR00990 Ribokinase signature 175 190 7.8E-29 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 PRINTS PR00990 Ribokinase signature 7 28 7.8E-29 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 PRINTS PR00990 Ribokinase signature 219 230 7.8E-29 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 PRINTS PR00990 Ribokinase signature 107 120 7.8E-29 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 Gene3D G3DSA:3.40.1190.20 1 307 1.4E-72 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 Pfam PF00294 pfkB family carbohydrate kinase 4 292 1.6E-62 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 Hamap MF_01987 Ribokinase [rbsK]. 3 303 22.082 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS17715 20cd78b54fcec93f878602abe567283d 313 SUPERFAMILY SSF53613 4 302 6.7E-73 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 Pfam PF00294 pfkB family carbohydrate kinase 20 295 2.0E-58 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 PIRSF PIRSF000535 1 308 1.1E-102 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 SUPERFAMILY SSF53613 4 298 1.87E-63 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 306 1.4E-93 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS24755 32a3d529cf0413e5ef917acab950608e 309 Gene3D G3DSA:3.40.1190.20 1 309 1.6E-53 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS02150 a5f3d0977aaed7800552ab0fddbcdc6a 285 SUPERFAMILY SSF46689 7 78 1.76E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS02150 a5f3d0977aaed7800552ab0fddbcdc6a 285 Pfam PF01380 SIS domain 125 225 2.2E-9 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CKQ55_RS02150 a5f3d0977aaed7800552ab0fddbcdc6a 285 Gene3D G3DSA:1.10.10.10 5 114 2.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS02150 a5f3d0977aaed7800552ab0fddbcdc6a 285 Gene3D G3DSA:3.40.50.10490 115 270 1.4E-10 T 29-03-2018 CKQ55_RS02150 a5f3d0977aaed7800552ab0fddbcdc6a 285 SUPERFAMILY SSF53697 93 224 1.09E-15 T 29-03-2018 CKQ55_RS02150 a5f3d0977aaed7800552ab0fddbcdc6a 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 8.7E-15 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CKQ55_RS26250 ebebc69e20fbda1a329e9082c29e9a87 680 Gene3D G3DSA:1.10.1370.10 146 376 6.0E-36 T 29-03-2018 CKQ55_RS26250 ebebc69e20fbda1a329e9082c29e9a87 680 Gene3D G3DSA:1.10.1370.10 460 680 3.2E-53 T 29-03-2018 CKQ55_RS26250 ebebc69e20fbda1a329e9082c29e9a87 680 SUPERFAMILY SSF55486 11 678 4.32E-169 T 29-03-2018 CKQ55_RS26250 ebebc69e20fbda1a329e9082c29e9a87 680 Pfam PF01432 Peptidase family M3 230 678 1.5E-132 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CKQ55_RS26250 ebebc69e20fbda1a329e9082c29e9a87 680 Gene3D G3DSA:1.20.1050.40 10 144 5.7E-40 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CKQ55_RS04945 ba1192a432826e7142306bdaa9211dc7 845 Pfam PF16967 E-set like domain 282 346 7.4E-24 T 29-03-2018 IPR032636 Pilus assembly protein, E-set like domain CKQ55_RS04945 ba1192a432826e7142306bdaa9211dc7 845 Pfam PF15976 CS1-pili formation C-terminal 737 829 3.0E-20 T 29-03-2018 IPR031917 Pilus assembly protein, C-terminal domain CKQ55_RS27565 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF01548 Transposase 7 147 9.3E-19 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CKQ55_RS27565 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 9.6E-20 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CKQ55_RS18510 6fd939e3aec99204c33286117931c86a 455 Gene3D G3DSA:1.10.4100.10 263 445 2.2E-32 T 29-03-2018 CKQ55_RS18510 6fd939e3aec99204c33286117931c86a 455 Gene3D G3DSA:3.30.1330.90 10 158 3.4E-51 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CKQ55_RS18510 6fd939e3aec99204c33286117931c86a 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.6E-219 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CKQ55_RS18510 6fd939e3aec99204c33286117931c86a 455 Pfam PF03315 Serine dehydratase beta chain 3 155 3.4E-56 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CKQ55_RS18510 6fd939e3aec99204c33286117931c86a 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.0E-93 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CKQ55_RS18510 6fd939e3aec99204c33286117931c86a 455 SUPERFAMILY SSF143548 16 158 3.66E-45 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CKQ55_RS11340 c377ae7d5c7d6bee5f91a4f4307c19d6 269 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 90 1.5E-17 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CKQ55_RS11340 c377ae7d5c7d6bee5f91a4f4307c19d6 269 SUPERFAMILY SSF51735 103 263 3.42E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11340 c377ae7d5c7d6bee5f91a4f4307c19d6 269 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 164 2.1E-6 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CKQ55_RS11340 c377ae7d5c7d6bee5f91a4f4307c19d6 269 Gene3D G3DSA:3.40.50.720 116 268 4.6E-27 T 29-03-2018 CKQ55_RS11340 c377ae7d5c7d6bee5f91a4f4307c19d6 269 SUPERFAMILY SSF53223 5 102 3.11E-28 T 29-03-2018 CKQ55_RS11340 c377ae7d5c7d6bee5f91a4f4307c19d6 269 Gene3D G3DSA:3.40.50.10860 18 115 1.5E-29 T 29-03-2018 CKQ55_RS23255 48b856e07f16bf89682bdb5ff94664b3 485 TIGRFAM TIGR00797 matE: MATE efflux family protein 37 441 3.8E-69 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS23255 48b856e07f16bf89682bdb5ff94664b3 485 PIRSF PIRSF006603 18 478 2.2E-73 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS23255 48b856e07f16bf89682bdb5ff94664b3 485 Pfam PF01554 MatE 267 428 1.7E-21 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS23255 48b856e07f16bf89682bdb5ff94664b3 485 Pfam PF01554 MatE 37 197 2.1E-34 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CKQ55_RS01285 3e7abe0eb40495964028aab6e5b8d29b 246 SUPERFAMILY SSF52540 3 236 1.33E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS01285 3e7abe0eb40495964028aab6e5b8d29b 246 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS01285 3e7abe0eb40495964028aab6e5b8d29b 246 PIRSF PIRSF039085 1 243 7.6E-112 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS01285 3e7abe0eb40495964028aab6e5b8d29b 246 SMART SM00382 28 215 1.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS01285 3e7abe0eb40495964028aab6e5b8d29b 246 Gene3D G3DSA:3.40.50.300 1 246 1.5E-76 T 29-03-2018 CKQ55_RS01285 3e7abe0eb40495964028aab6e5b8d29b 246 Pfam PF00005 ABC transporter 19 167 5.8E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06450 1d9e63beae814f48f49ee29f93ec58a9 200 Pfam PF00578 AhpC/TSA family 5 139 2.2E-34 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS06450 1d9e63beae814f48f49ee29f93ec58a9 200 Gene3D G3DSA:3.30.1020.10 162 198 3.4E-15 T 29-03-2018 CKQ55_RS06450 1d9e63beae814f48f49ee29f93ec58a9 200 SUPERFAMILY SSF52833 1 193 5.73E-66 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS06450 1d9e63beae814f48f49ee29f93ec58a9 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.2E-12 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS06450 1d9e63beae814f48f49ee29f93ec58a9 200 PIRSF PIRSF000239 1 198 9.3E-59 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS06450 1d9e63beae814f48f49ee29f93ec58a9 200 Gene3D G3DSA:3.40.30.10 3 161 1.7E-39 T 29-03-2018 CKQ55_RS03975 3cbe25196ca12e60f552b872e3ea7e89 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 227 6.9E-21 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CKQ55_RS03975 3cbe25196ca12e60f552b872e3ea7e89 266 SUPERFAMILY SSF100950 1 263 2.43E-105 T 29-03-2018 CKQ55_RS03975 3cbe25196ca12e60f552b872e3ea7e89 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.074 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CKQ55_RS03975 3cbe25196ca12e60f552b872e3ea7e89 266 Gene3D G3DSA:3.40.50.1360 1 266 5.0E-87 T 29-03-2018 CKQ55_RS03975 3cbe25196ca12e60f552b872e3ea7e89 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CKQ55_RS03975 3cbe25196ca12e60f552b872e3ea7e89 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 9.6E-143 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 PRINTS PR00050 Cold shock protein signature 7 22 2.2E-9 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 PRINTS PR00050 Cold shock protein signature 28 37 2.2E-9 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 PRINTS PR00050 Cold shock protein signature 43 61 2.2E-9 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 Gene3D G3DSA:2.40.50.140 1 73 1.5E-21 T 29-03-2018 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 SMART SM00357 6 71 2.3E-20 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 PIRSF PIRSF002599 1 73 8.2E-18 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 SUPERFAMILY SSF50249 3 70 6.09E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS01490 1db025d7dffd6b888736ab9c391652f4 73 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 1.3E-23 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 29-03-2018 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16650 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS09745 1c917ea8fb8f6913db9be5674264ef58 223 SUPERFAMILY SSF161098 12 199 3.01E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09745 1c917ea8fb8f6913db9be5674264ef58 223 Gene3D G3DSA:1.10.3720.10 2 218 5.0E-39 T 29-03-2018 CKQ55_RS09745 1c917ea8fb8f6913db9be5674264ef58 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 6.9E-28 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS09745 1c917ea8fb8f6913db9be5674264ef58 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 210 4.6E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS26400 06ee8bca1110b59100e9e0d496f61912 232 Gene3D G3DSA:3.40.50.300 1 226 5.8E-58 T 29-03-2018 CKQ55_RS26400 06ee8bca1110b59100e9e0d496f61912 232 SMART SM00382 26 211 1.8E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS26400 06ee8bca1110b59100e9e0d496f61912 232 SUPERFAMILY SSF52540 2 221 4.79E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26400 06ee8bca1110b59100e9e0d496f61912 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 3.1E-106 T 29-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CKQ55_RS26400 06ee8bca1110b59100e9e0d496f61912 232 Pfam PF00005 ABC transporter 17 161 7.0E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS29165 1a5a0ec3c61a17f83711d592276b1b9d 328 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 293 6.6E-85 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS29165 1a5a0ec3c61a17f83711d592276b1b9d 328 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 317 1.4E-93 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS29165 1a5a0ec3c61a17f83711d592276b1b9d 328 SMART SM00797 23 311 2.3E-130 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CKQ55_RS29165 1a5a0ec3c61a17f83711d592276b1b9d 328 SUPERFAMILY SSF50891 196 299 4.17E-6 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS10645 4949d4956a376f1ef02692db44263084 43 Pfam PF08085 Entericidin EcnA/B family 22 41 5.4E-9 T 29-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CKQ55_RS23230 a5c37f1e1374668ce6b6f07c7ab33044 276 Gene3D G3DSA:2.60.120.620 2 254 5.0E-40 T 29-03-2018 CKQ55_RS23230 a5c37f1e1374668ce6b6f07c7ab33044 276 SUPERFAMILY SSF51197 15 247 3.48E-48 T 29-03-2018 CKQ55_RS23230 a5c37f1e1374668ce6b6f07c7ab33044 276 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 26 232 3.5E-24 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CKQ55_RS09080 e934b30859bccb93a448b4f39016e4d9 126 SUPERFAMILY SSF55331 2 126 1.46E-45 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CKQ55_RS09080 e934b30859bccb93a448b4f39016e4d9 126 Gene3D G3DSA:3.30.429.10 1 126 7.2E-47 T 29-03-2018 CKQ55_RS09080 e934b30859bccb93a448b4f39016e4d9 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 4.4E-28 T 29-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 CKQ55_RS26660 9eb13ab2db2183b6fdc338a8d829c8a9 268 Pfam PF03180 NLPA lipoprotein 27 264 7.4E-78 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS26660 9eb13ab2db2183b6fdc338a8d829c8a9 268 Gene3D G3DSA:3.40.190.10 119 264 3.0E-50 T 29-03-2018 CKQ55_RS26660 9eb13ab2db2183b6fdc338a8d829c8a9 268 PIRSF PIRSF002854 1 265 2.7E-102 T 29-03-2018 IPR004872 Lipoprotein NlpA family CKQ55_RS26660 9eb13ab2db2183b6fdc338a8d829c8a9 268 Gene3D G3DSA:3.40.190.10 23 118 2.9E-17 T 29-03-2018 CKQ55_RS26660 9eb13ab2db2183b6fdc338a8d829c8a9 268 SUPERFAMILY SSF53850 27 265 5.5E-67 T 29-03-2018 CKQ55_RS08930 fe5527988b0248c28945223c7720bb05 763 Pfam PF00884 Sulfatase 163 445 1.9E-21 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CKQ55_RS08930 fe5527988b0248c28945223c7720bb05 763 Gene3D G3DSA:3.40.720.10 151 449 6.6E-29 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS08930 fe5527988b0248c28945223c7720bb05 763 SUPERFAMILY SSF53649 161 469 5.45E-30 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS05760 bcc7cba7f0b98f1e0978489aba7cea85 381 SUPERFAMILY SSF56935 44 381 3.02E-31 T 29-03-2018 CKQ55_RS05760 bcc7cba7f0b98f1e0978489aba7cea85 381 Pfam PF03797 Autotransporter beta-domain 215 324 1.4E-6 T 29-03-2018 IPR005546 Autotransporter beta-domain CKQ55_RS05760 bcc7cba7f0b98f1e0978489aba7cea85 381 Gene3D G3DSA:2.40.160.10 13 381 5.2E-33 T 29-03-2018 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 7.0E-38 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 6.6E-39 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 PIRSF PIRSF003196 1 109 1.0E-39 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 Pfam PF01371 Trp repressor protein 17 103 1.2E-28 T 29-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.285 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 SUPERFAMILY SSF48295 5 104 2.09E-29 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CKQ55_RS08730 3fb5bd35d38c62de438e42aeb6d2f703 110 Gene3D G3DSA:1.10.1270.10 8 108 1.1E-26 T 29-03-2018 CKQ55_RS13880 3bd65e72fa3ca3e148426532d49f2824 198 Pfam PF05068 Mannitol repressor 29 187 3.3E-61 T 29-03-2018 IPR007761 Mannitol repressor MtlR-like CKQ55_RS13880 3bd65e72fa3ca3e148426532d49f2824 198 SUPERFAMILY SSF158668 26 187 2.09E-57 T 29-03-2018 CKQ55_RS13880 3bd65e72fa3ca3e148426532d49f2824 198 Gene3D G3DSA:1.20.120.330 27 187 4.2E-57 T 29-03-2018 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 851 1.8E-113 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 SUPERFAMILY SSF53720 6 453 1.07E-83 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 Gene3D G3DSA:3.40.605.10 1 231 3.7E-33 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 PIRSF PIRSF000111 1 866 0.0 T 29-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 Gene3D G3DSA:3.40.309.10 232 404 5.9E-26 T 29-03-2018 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 Gene3D G3DSA:3.40.50.1970 430 643 2.5E-50 T 29-03-2018 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 Gene3D G3DSA:1.20.1090.10 644 868 7.6E-59 T 29-03-2018 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 Pfam PF00171 Aldehyde dehydrogenase family 5 269 8.3E-27 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CKQ55_RS24615 94422f3dbf25ad3bd9bc3d8bd85e9b80 891 SUPERFAMILY SSF56796 449 867 2.36E-117 T 29-03-2018 CKQ55_RS04190 d4e8bd6688a24f6931cb32ae5026049a 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.81 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CKQ55_RS04190 d4e8bd6688a24f6931cb32ae5026049a 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 115 1.3E-23 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CKQ55_RS04190 d4e8bd6688a24f6931cb32ae5026049a 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 1.6E-42 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CKQ55_RS18665 9822701f33cb08fb8cf6949887e76cba 248 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 233 8.8E-49 T 29-03-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 CKQ55_RS18665 9822701f33cb08fb8cf6949887e76cba 248 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 4.5E-14 T 29-03-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal CKQ55_RS18665 9822701f33cb08fb8cf6949887e76cba 248 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 232 1.9E-35 T 29-03-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 Pfam PF07883 Cupin domain 23 76 1.9E-8 T 29-03-2018 IPR013096 Cupin 2, conserved barrel CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 Gene3D G3DSA:1.10.10.60 225 272 1.3E-11 T 29-03-2018 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 SMART SM00342 184 267 1.0E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 SUPERFAMILY SSF46689 220 270 1.21E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 Pfam PF12833 Helix-turn-helix domain 195 268 1.4E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 SUPERFAMILY SSF51182 20 170 1.7E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 Gene3D G3DSA:1.10.10.60 174 224 0.014 T 29-03-2018 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 Gene3D G3DSA:2.60.120.10 2 91 2.2E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 2.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS29645 04aed859c36ee98168752a0f2302aa07 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 2.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CKQ55_RS18260 69bf2933c5d6a0b3f69e09aacd96cc7e 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 29-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CKQ55_RS18260 69bf2933c5d6a0b3f69e09aacd96cc7e 554 SUPERFAMILY SSF51703 1 553 1.1E-293 T 29-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CKQ55_RS18260 69bf2933c5d6a0b3f69e09aacd96cc7e 554 PIRSF PIRSF018507 1 554 0.0 T 29-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CKQ55_RS18260 69bf2933c5d6a0b3f69e09aacd96cc7e 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 29-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CKQ55_RS18260 69bf2933c5d6a0b3f69e09aacd96cc7e 554 Gene3D G3DSA:3.20.20.350 2 553 0.0 T 29-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CKQ55_RS25400 88a50f99d3ca4c6545a232253687f266 172 Gene3D G3DSA:2.60.40.1090 24 172 3.7E-35 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS25400 88a50f99d3ca4c6545a232253687f266 172 Pfam PF00419 Fimbrial protein 26 171 6.7E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS25400 88a50f99d3ca4c6545a232253687f266 172 SUPERFAMILY SSF49401 26 172 9.94E-35 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS02070 b12ad186503a9b32282d0419a21221db 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.6E-130 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CKQ55_RS02070 b12ad186503a9b32282d0419a21221db 248 Gene3D G3DSA:3.90.550.10 1 248 2.0E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS02070 b12ad186503a9b32282d0419a21221db 248 Pfam PF02348 Cytidylyltransferase 4 221 2.0E-72 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CKQ55_RS02070 b12ad186503a9b32282d0419a21221db 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.677 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CKQ55_RS02070 b12ad186503a9b32282d0419a21221db 248 SUPERFAMILY SSF53448 3 245 3.6E-69 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS24025 5ea11508cdcdf82d3acfa63adf2b4b0e 379 Pfam PF05426 Alginate lyase 50 325 2.3E-68 T 29-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 CKQ55_RS24025 5ea11508cdcdf82d3acfa63adf2b4b0e 379 Gene3D G3DSA:1.50.10.100 51 359 7.0E-42 T 29-03-2018 CKQ55_RS24025 5ea11508cdcdf82d3acfa63adf2b4b0e 379 SUPERFAMILY SSF48230 54 332 1.28E-51 T 29-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CKQ55_RS10440 781d9594a63fa686dba924d588d9e184 466 Pfam PF03611 PTS system sugar-specific permease component 15 410 2.3E-123 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS13175 97c4a6c0c1799e80687d0e277aa064c3 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 8 71 6.0E-18 T 29-03-2018 IPR020264 Uncharacterised protein family YidG CKQ55_RS13175 97c4a6c0c1799e80687d0e277aa064c3 120 Pfam PF02656 Domain of unknown function (DUF202) 12 66 1.2E-9 T 29-03-2018 IPR003807 Domain of unknown function DUF202 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 6.5E-71 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 6.5E-71 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 6.5E-71 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 154 173 6.5E-71 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 191 214 6.5E-71 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 25 46 6.5E-71 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 4 214 1.4E-91 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 Pfam PF03379 CcmB protein 1 215 3.3E-88 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CKQ55_RS19520 2171fddf090e77762b726b750465aa7e 218 PIRSF PIRSF002764 1 218 3.9E-79 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CKQ55_RS17410 7356455596cb1d76e5083502c820c0ee 285 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 20 285 3.6E-86 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS28990 828391662662929352c8a0139fea5ef8 221 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 7 211 4.6E-36 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CKQ55_RS28990 828391662662929352c8a0139fea5ef8 221 Pfam PF09850 Type VI secretion system protein DotU 7 207 3.7E-38 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CKQ55_RS26790 e6dbf9327ceec8462ada47844da4ee36 420 Pfam PF03611 PTS system sugar-specific permease component 7 381 3.7E-64 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS26790 e6dbf9327ceec8462ada47844da4ee36 420 PIRSF PIRSF006304 1 419 1.2E-138 T 29-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CKQ55_RS21320 f80d0a4e37fc66c929a54a9ad57a479d 429 SUPERFAMILY SSF103473 9 418 6.67E-74 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS21320 f80d0a4e37fc66c929a54a9ad57a479d 429 Pfam PF07690 Major Facilitator Superfamily 23 381 4.9E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS21320 f80d0a4e37fc66c929a54a9ad57a479d 429 Gene3D G3DSA:1.20.1250.20 226 424 3.2E-19 T 29-03-2018 CKQ55_RS21320 f80d0a4e37fc66c929a54a9ad57a479d 429 Gene3D G3DSA:1.20.1250.20 5 215 8.0E-36 T 29-03-2018 CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 5.5E-45 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.232 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 1.0E-46 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 Gene3D G3DSA:3.30.300.20 1 106 1.3E-35 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 Pfam PF02033 Ribosome-binding factor A 7 112 4.7E-33 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 SUPERFAMILY SSF89919 2 107 1.44E-35 T 29-03-2018 IPR023799 Ribosome-binding factor A domain CKQ55_RS16090 fe6c8128966bbf830e2901792e3149d6 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 29-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CKQ55_RS09580 c5ee58bf509ca9aa66dbb4774a61930b 274 Pfam PF06067 Domain of unknown function (DUF932) 36 261 5.5E-55 T 29-03-2018 IPR026325 Protein of unknown function DUF932 CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 Pfam PF03466 LysR substrate binding domain 89 291 4.9E-24 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 Gene3D G3DSA:3.40.190.10 90 181 3.3E-11 T 29-03-2018 CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 Gene3D G3DSA:3.40.190.10 182 259 5.5E-9 T 29-03-2018 CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 SUPERFAMILY SSF53850 90 292 1.99E-29 T 29-03-2018 CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.5E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 Gene3D G3DSA:1.10.10.10 1 85 1.8E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06480 a50922c79f2eb19626f16f3cf04e8589 300 SUPERFAMILY SSF46785 3 87 3.54E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 Gene3D G3DSA:3.20.20.70 1 259 5.7E-59 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.9E-97 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 SUPERFAMILY SSF51366 257 450 5.49E-56 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 1.7E-60 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 34.954 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 29.641 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 Gene3D G3DSA:3.20.20.70 260 452 1.1E-57 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS29520 8dbc89e5f15e1346f8588a6c2a3db3ce 452 SUPERFAMILY SSF51366 1 251 6.24E-83 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS08915 96fa8991228b42b533b7377bbd4a99fb 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 38.518 T 29-03-2018 IPR020917 Primosomal protein 1 GO:0006260 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 55.96 T 29-03-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 1.2E-37 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 458 3.0E-79 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 Gene3D G3DSA:3.40.50.720 1 268 1.0E-62 T 29-03-2018 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 Gene3D G3DSA:1.10.1040.10 272 483 2.7E-61 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 SUPERFAMILY SSF48179 273 482 3.4E-53 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS26550 475cb37666d447f8112290d5725e5985 483 SUPERFAMILY SSF51735 2 263 1.65E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS11035 5e1ca32e2fa990b2bcdd008a33841be7 93 PIRSF PIRSF030798 1 93 3.0E-43 T 29-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CKQ55_RS11035 5e1ca32e2fa990b2bcdd008a33841be7 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 2.0E-26 T 29-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CKQ55_RS11035 5e1ca32e2fa990b2bcdd008a33841be7 93 Pfam PF15940 Family of unknown function 1 90 3.5E-44 T 29-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CKQ55_RS24720 d67540c4a5f4e32281a0ee32e341a3e0 120 SUPERFAMILY SSF141066 20 118 5.62E-18 T 29-03-2018 IPR018990 Proteinase inhibitor I42, chagasin CKQ55_RS24720 d67540c4a5f4e32281a0ee32e341a3e0 120 Pfam PF09394 Chagasin family peptidase inhibitor I42 31 114 3.5E-15 T 29-03-2018 IPR018990 Proteinase inhibitor I42, chagasin CKQ55_RS20390 ec7cbcbd64f2ca8be62f25b6e39a67ff 344 PIRSF PIRSF026343 9 344 1.2E-132 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC CKQ55_RS20390 ec7cbcbd64f2ca8be62f25b6e39a67ff 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 36.588 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC CKQ55_RS20390 ec7cbcbd64f2ca8be62f25b6e39a67ff 344 Pfam PF06804 NlpB/DapX lipoprotein 41 342 2.9E-108 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 491 1.5E-211 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 PIRSF PIRSF006294 3 540 5.7E-235 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 SUPERFAMILY SSF68923 9 227 1.6E-91 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 Gene3D G3DSA:3.40.449.10 23 227 4.9E-78 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 SUPERFAMILY SSF53795 229 539 1.67E-128 T 29-03-2018 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 539 3.1E-290 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 Gene3D G3DSA:3.90.228.20 228 312 3.4E-30 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 Gene3D G3DSA:3.90.228.20 313 538 9.4E-93 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CKQ55_RS14995 962601bab0bc94c62b56635d719ff5c5 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 16 538 56.084 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CKQ55_RS05875 f683a8a0a80f5cdb479ad35cc9c77c63 406 Pfam PF07690 Major Facilitator Superfamily 31 264 1.2E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS05875 f683a8a0a80f5cdb479ad35cc9c77c63 406 SUPERFAMILY SSF103473 15 400 5.62E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS05875 f683a8a0a80f5cdb479ad35cc9c77c63 406 Gene3D G3DSA:1.20.1250.20 18 213 2.2E-21 T 29-03-2018 CKQ55_RS05875 f683a8a0a80f5cdb479ad35cc9c77c63 406 Gene3D G3DSA:1.20.1250.20 219 405 1.2E-24 T 29-03-2018 CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 Pfam PF00308 Bacterial dnaA protein 24 220 7.0E-17 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 SUPERFAMILY SSF52540 26 220 1.45E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 13 241 56.872 T 29-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 139 166 1.7E-7 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 51 71 1.7E-7 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 Gene3D G3DSA:1.10.8.60 175 241 2.6E-15 T 29-03-2018 CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 14 240 8.4E-84 T 29-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CKQ55_RS20355 3b1e7f37790bf07007c21d3fa226e6fe 241 Gene3D G3DSA:3.40.50.300 22 172 2.6E-9 T 29-03-2018 CKQ55_RS14855 253a31d72107d7d27094d44632542e1d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 294 1.8E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14855 253a31d72107d7d27094d44632542e1d 295 Gene3D G3DSA:1.10.3720.10 13 295 7.8E-45 T 29-03-2018 CKQ55_RS14855 253a31d72107d7d27094d44632542e1d 295 SUPERFAMILY SSF161098 56 282 1.1E-51 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS13945 fbe454944fb9da879029c924cc65d3c2 220 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.8E-24 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS13945 fbe454944fb9da879029c924cc65d3c2 220 SMART SM00934 5 207 8.7E-31 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CKQ55_RS13945 fbe454944fb9da879029c924cc65d3c2 220 SUPERFAMILY SSF51366 2 217 2.5E-34 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CKQ55_RS13945 fbe454944fb9da879029c924cc65d3c2 220 Gene3D G3DSA:3.20.20.70 1 216 1.2E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS23645 25868722e3cb96f21fd30f555968dded 131 Pfam PF01124 MAPEG family 3 120 1.3E-25 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CKQ55_RS23645 25868722e3cb96f21fd30f555968dded 131 SUPERFAMILY SSF161084 4 127 7.72E-31 T 29-03-2018 CKQ55_RS23645 25868722e3cb96f21fd30f555968dded 131 Gene3D G3DSA:1.20.120.550 1 127 1.0E-23 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CKQ55_RS11770 d1db7485367aa7276b451b016156765f 229 SUPERFAMILY SSF53850 11 227 8.69E-35 T 29-03-2018 CKQ55_RS11770 d1db7485367aa7276b451b016156765f 229 SMART SM00062 10 229 3.1E-22 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS11770 d1db7485367aa7276b451b016156765f 229 Gene3D G3DSA:3.40.190.10 109 187 5.6E-14 T 29-03-2018 CKQ55_RS11770 d1db7485367aa7276b451b016156765f 229 Gene3D G3DSA:3.40.190.10 1 108 5.9E-13 T 29-03-2018 CKQ55_RS11770 d1db7485367aa7276b451b016156765f 229 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 12 227 8.4E-24 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS21155 6927786d41fcca79f796aed4df04f319 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 5.8E-34 T 29-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 PIRSF PIRSF002741 21 535 3.5E-121 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 Gene3D G3DSA:3.10.105.10 300 506 5.3E-66 T 29-03-2018 CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 SUPERFAMILY SSF53850 29 534 3.44E-164 T 29-03-2018 CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 Gene3D G3DSA:3.40.190.10 204 299 5.1E-30 T 29-03-2018 CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 1.8E-108 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 Gene3D G3DSA:3.90.76.10 38 203 4.1E-39 T 29-03-2018 CKQ55_RS14170 485164806c7e7df9ed89a4f193c49530 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CKQ55_RS27910 68b51d323567a133e80108652ff5e0ec 353 SUPERFAMILY SSF51004 38 337 1.06E-39 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CKQ55_RS27910 68b51d323567a133e80108652ff5e0ec 353 Pfam PF13360 PQQ-like domain 110 266 9.3E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CKQ55_RS27910 68b51d323567a133e80108652ff5e0ec 353 Gene3D G3DSA:2.130.10.10 31 353 1.7E-52 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS22825 76692cc29d32fb85e933dc0ff4e3561d 380 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS22825 76692cc29d32fb85e933dc0ff4e3561d 380 Pfam PF00682 HMGL-like 4 257 3.8E-70 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CKQ55_RS22825 76692cc29d32fb85e933dc0ff4e3561d 380 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 4 367 6.6E-163 T 29-03-2018 IPR013477 Homocitrate synthase NifV-type GO:0004410|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 CKQ55_RS22825 76692cc29d32fb85e933dc0ff4e3561d 380 Gene3D G3DSA:3.20.20.70 2 319 1.1E-86 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22825 76692cc29d32fb85e933dc0ff4e3561d 380 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 190 203 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CKQ55_RS22825 76692cc29d32fb85e933dc0ff4e3561d 380 SUPERFAMILY SSF51569 2 278 1.01E-75 T 29-03-2018 CKQ55_RS31670 8e3c83190f43471681f4ec6f8b41c811 420 SUPERFAMILY SSF52540 164 388 2.65E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31670 8e3c83190f43471681f4ec6f8b41c811 420 SMART SM00382 200 318 1.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS31670 8e3c83190f43471681f4ec6f8b41c811 420 Gene3D G3DSA:3.40.50.300 153 215 0.0045 T 29-03-2018 CKQ55_RS31670 8e3c83190f43471681f4ec6f8b41c811 420 Gene3D G3DSA:3.40.50.300 216 413 6.7E-13 T 29-03-2018 CKQ55_RS31670 8e3c83190f43471681f4ec6f8b41c811 420 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 315 6.9E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CKQ55_RS05100 e804cd07cfc29176cf4bc599cf45335c 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 332 1.1E-45 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS05100 e804cd07cfc29176cf4bc599cf45335c 343 Gene3D G3DSA:1.10.3470.10 28 338 3.1E-37 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS29905 d4a0d30c59bac6a8d067c4357126e378 248 Pfam PF06629 MltA-interacting protein MipA 28 248 5.9E-52 T 29-03-2018 IPR010583 MltA-interacting MipA CKQ55_RS29905 d4a0d30c59bac6a8d067c4357126e378 248 Gene3D G3DSA:2.40.160.20 8 248 6.5E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS09360 a1b0f58c917189b8b6e4941db4d52e4c 140 Pfam PF00936 BMC domain 3 78 5.5E-19 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09360 a1b0f58c917189b8b6e4941db4d52e4c 140 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 48 2.0E-17 T 29-03-2018 CKQ55_RS09360 a1b0f58c917189b8b6e4941db4d52e4c 140 SMART SM00877 2 78 5.8E-20 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09360 a1b0f58c917189b8b6e4941db4d52e4c 140 SUPERFAMILY SSF143414 1 88 1.22E-20 T 29-03-2018 CKQ55_RS18250 fc14bc8dabf1920cc6422df483531089 173 SUPERFAMILY SSF47148 39 173 9.81E-64 T 29-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CKQ55_RS18250 fc14bc8dabf1920cc6422df483531089 173 PIRSF PIRSF018505 1 173 1.3E-79 T 29-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CKQ55_RS18250 fc14bc8dabf1920cc6422df483531089 173 Pfam PF02287 Dehydratase small subunit 40 170 4.5E-62 T 29-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CKQ55_RS31395 aaac81985bff9c3598281bc5df7d9d7a 281 SUPERFAMILY SSF53335 90 213 2.72E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS31395 aaac81985bff9c3598281bc5df7d9d7a 281 Gene3D G3DSA:1.10.8.10 3 60 1.7E-17 T 29-03-2018 CKQ55_RS31395 aaac81985bff9c3598281bc5df7d9d7a 281 PIRSF PIRSF015852 6 281 3.6E-48 T 29-03-2018 IPR010769 Ribosomal RNA aminoglycoside-resistance methyltransferase, Gram-negative bacteria GO:0008649|GO:0046677 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS31395 aaac81985bff9c3598281bc5df7d9d7a 281 Gene3D G3DSA:3.40.50.150 85 281 2.8E-9 T 29-03-2018 CKQ55_RS31395 aaac81985bff9c3598281bc5df7d9d7a 281 Pfam PF07091 Ribosomal RNA methyltransferase (FmrO) 18 277 8.6E-37 T 29-03-2018 IPR025981 Ribosomal RNA aminoglycoside-resistance methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CKQ55_RS08490 052a5f7c1d17e4e809b2c43aa976a7db 209 SUPERFAMILY SSF50447 1 75 1.38E-13 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CKQ55_RS08490 052a5f7c1d17e4e809b2c43aa976a7db 209 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 166 194 1.0E-4 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CKQ55_RS08490 052a5f7c1d17e4e809b2c43aa976a7db 209 Gene3D G3DSA:3.30.980.10 150 209 1.6E-6 T 29-03-2018 CKQ55_RS08490 052a5f7c1d17e4e809b2c43aa976a7db 209 Gene3D G3DSA:3.30.980.10 85 149 8.6E-5 T 29-03-2018 CKQ55_RS08490 052a5f7c1d17e4e809b2c43aa976a7db 209 SUPERFAMILY SSF55186 85 202 9.55E-20 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CKQ55_RS19050 9b07a959ef6b0f470e3046a9ce3847ff 315 Gene3D G3DSA:3.40.50.1820 59 315 1.6E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS19050 9b07a959ef6b0f470e3046a9ce3847ff 315 Pfam PF00326 Prolyl oligopeptidase family 131 287 6.9E-14 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CKQ55_RS19050 9b07a959ef6b0f470e3046a9ce3847ff 315 SUPERFAMILY SSF53474 67 309 8.72E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS14450 2d3a2584c781cc489fadce94865a03d3 680 Gene3D G3DSA:1.10.1370.10 457 680 3.9E-70 T 29-03-2018 CKQ55_RS14450 2d3a2584c781cc489fadce94865a03d3 680 Gene3D G3DSA:1.10.1370.10 140 440 3.4E-61 T 29-03-2018 CKQ55_RS14450 2d3a2584c781cc489fadce94865a03d3 680 Pfam PF01432 Peptidase family M3 222 677 8.3E-176 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CKQ55_RS14450 2d3a2584c781cc489fadce94865a03d3 680 SUPERFAMILY SSF55486 1 677 4.4E-215 T 29-03-2018 CKQ55_RS14450 2d3a2584c781cc489fadce94865a03d3 680 Gene3D G3DSA:1.20.1050.40 4 138 1.2E-38 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 SUPERFAMILY SSF53850 115 316 3.44E-21 T 29-03-2018 CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 1.5E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 Gene3D G3DSA:3.40.190.10 199 286 6.7E-7 T 29-03-2018 CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 Gene3D G3DSA:1.10.10.10 24 110 3.0E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 SUPERFAMILY SSF46785 26 108 4.29E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 Gene3D G3DSA:3.40.190.10 113 198 9.9E-10 T 29-03-2018 CKQ55_RS04170 6076d251f52b18d2a525bc6b6e7c6dd7 317 Pfam PF03466 LysR substrate binding domain 114 316 1.0E-17 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS00260 01a61a68656e40bddb22c2729002f395 406 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 27 400 3.3E-63 T 29-03-2018 IPR024455 Phage capsid CKQ55_RS00260 01a61a68656e40bddb22c2729002f395 406 Gene3D G3DSA:3.30.2400.10 153 294 3.2E-30 T 29-03-2018 CKQ55_RS00260 01a61a68656e40bddb22c2729002f395 406 Gene3D G3DSA:3.30.2400.10 309 391 4.6E-9 T 29-03-2018 CKQ55_RS00260 01a61a68656e40bddb22c2729002f395 406 SUPERFAMILY SSF56563 126 403 6.41E-82 T 29-03-2018 CKQ55_RS00260 01a61a68656e40bddb22c2729002f395 406 Pfam PF05065 Phage capsid family 135 400 5.3E-61 T 29-03-2018 IPR024455 Phage capsid CKQ55_RS19410 ffe9362697abf674cac47912a9246c8a 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 33.802 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CKQ55_RS19410 ffe9362697abf674cac47912a9246c8a 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 3.0E-55 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CKQ55_RS19410 ffe9362697abf674cac47912a9246c8a 149 Pfam PF06610 L-alanine exporter 4 141 1.4E-66 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CKQ55_RS25750 1c1854705ffae40c9a7c8019ded0c40f 146 Pfam PF10754 Protein of unknown function (DUF2569) 7 144 5.5E-40 T 29-03-2018 IPR019690 Protein of unknown function DUF2569 CKQ55_RS16795 74fb53679ab4b3ee7b641d519424006b 482 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 435 2.3E-135 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CKQ55_RS16795 74fb53679ab4b3ee7b641d519424006b 482 Pfam PF02321 Outer membrane efflux protein 232 421 3.5E-33 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS16795 74fb53679ab4b3ee7b641d519424006b 482 Pfam PF02321 Outer membrane efflux protein 25 209 3.4E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS16795 74fb53679ab4b3ee7b641d519424006b 482 Gene3D G3DSA:1.20.1600.10 13 431 4.0E-73 T 29-03-2018 CKQ55_RS16795 74fb53679ab4b3ee7b641d519424006b 482 SUPERFAMILY SSF56954 25 438 1.31E-93 T 29-03-2018 CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 Gene3D G3DSA:3.40.50.720 1 199 3.8E-31 T 29-03-2018 CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 SUPERFAMILY SSF51735 1 193 1.14E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 164 3.2E-17 T 29-03-2018 CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 1.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 1.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 1.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS16975 0eae92141e548733bc53fbc799d01386 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 115 1.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27410 30f19984700febe74e332d9f66627735 246 SUPERFAMILY SSF161098 48 233 1.18E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27410 30f19984700febe74e332d9f66627735 246 Gene3D G3DSA:1.10.3720.10 4 244 2.4E-20 T 29-03-2018 CKQ55_RS27410 30f19984700febe74e332d9f66627735 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 238 3.0E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS30565 8f7bbf2be81daf21104898a9175eb467 651 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 355 600 1.0E-81 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CKQ55_RS30565 8f7bbf2be81daf21104898a9175eb467 651 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 18 640 1.8E-153 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 Gene3D G3DSA:3.40.190.10 158 327 3.8E-28 T 29-03-2018 CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 Gene3D G3DSA:3.40.190.10 39 157 8.0E-19 T 29-03-2018 CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 327 4.1E-25 T 29-03-2018 CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 SUPERFAMILY SSF53850 33 330 6.92E-53 T 29-03-2018 CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 2.3E-6 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 2.3E-6 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS28035 0eaf65f04049b146cedd1c938adfc48d 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 2.3E-6 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS20790 342a3066f2f921350ab50eac11247781 412 Gene3D G3DSA:3.40.640.10 51 302 2.7E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS20790 342a3066f2f921350ab50eac11247781 412 Pfam PF00155 Aminotransferase class I and II 37 381 5.4E-59 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS20790 342a3066f2f921350ab50eac11247781 412 SUPERFAMILY SSF53383 10 394 6.72E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS20790 342a3066f2f921350ab50eac11247781 412 Gene3D G3DSA:3.90.1150.10 303 398 4.8E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS26990 cd323547abdf77b33cdd958855ffc255 440 SUPERFAMILY SSF51905 34 256 5.5E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26990 cd323547abdf77b33cdd958855ffc255 440 SUPERFAMILY SSF51905 355 401 5.5E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26990 cd323547abdf77b33cdd958855ffc255 440 Gene3D G3DSA:3.50.50.60 26 410 4.8E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26990 cd323547abdf77b33cdd958855ffc255 440 Pfam PF01266 FAD dependent oxidoreductase 35 392 1.2E-35 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS12620 eec9470e38ed715e3e0646af5bbc4623 392 SUPERFAMILY SSF48208 26 391 3.14E-110 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS12620 eec9470e38ed715e3e0646af5bbc4623 392 Gene3D G3DSA:1.50.10.10 23 392 9.3E-97 T 29-03-2018 CKQ55_RS12620 eec9470e38ed715e3e0646af5bbc4623 392 Pfam PF07470 Glycosyl Hydrolase Family 88 48 385 4.2E-45 T 29-03-2018 IPR010905 Glycosyl hydrolase, family 88 CKQ55_RS15010 971346353ddab7672aea6a32a3197f48 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 2.6E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS15010 971346353ddab7672aea6a32a3197f48 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 1.3E-8 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15010 971346353ddab7672aea6a32a3197f48 227 SUPERFAMILY SSF56784 7 217 2.24E-45 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15010 971346353ddab7672aea6a32a3197f48 227 Gene3D G3DSA:3.40.50.1000 4 210 6.9E-22 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS26210 699ae4647c272ae9a3283241462f1f61 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.467 T 29-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CKQ55_RS26210 699ae4647c272ae9a3283241462f1f61 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.4E-44 T 29-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CKQ55_RS26210 699ae4647c272ae9a3283241462f1f61 108 SUPERFAMILY SSF103481 7 105 4.32E-6 T 29-03-2018 CKQ55_RS16740 e72a08a74c5c0df8f5775da0f675821a 69 Gene3D G3DSA:1.20.970.20 10 59 1.8E-26 T 29-03-2018 CKQ55_RS16740 e72a08a74c5c0df8f5775da0f675821a 69 SUPERFAMILY SSF109747 3 62 1.96E-27 T 29-03-2018 IPR015065 Surface composition regulator CKQ55_RS16740 e72a08a74c5c0df8f5775da0f675821a 69 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 4 69 2.0E-20 T 29-03-2018 IPR015065 Surface composition regulator CKQ55_RS16740 e72a08a74c5c0df8f5775da0f675821a 69 Hamap MF_00525 Surface composition regulator [glgS]. 1 60 19.047 T 29-03-2018 IPR015065 Surface composition regulator CKQ55_RS16740 e72a08a74c5c0df8f5775da0f675821a 69 Pfam PF08971 Glycogen synthesis protein 3 62 1.2E-30 T 29-03-2018 IPR015065 Surface composition regulator CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.106 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 9.8E-54 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-67 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 Pfam PF01668 SmpB protein 14 157 6.3E-56 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 SUPERFAMILY SSF74982 8 138 3.01E-50 T 29-03-2018 IPR023620 Small protein B CKQ55_RS19685 12136a8aab94e834e97ba17bcb2febc1 160 Gene3D G3DSA:2.40.280.10 14 133 3.5E-45 T 29-03-2018 IPR023620 Small protein B CKQ55_RS18540 89bcb291214a99f9156f46366f33512f 264 Pfam PF00849 RNA pseudouridylate synthase 11 170 5.2E-29 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS18540 89bcb291214a99f9156f46366f33512f 264 Gene3D G3DSA:3.30.2350.10 1 237 5.1E-60 T 29-03-2018 CKQ55_RS18540 89bcb291214a99f9156f46366f33512f 264 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS18540 89bcb291214a99f9156f46366f33512f 264 SUPERFAMILY SSF55120 2 237 2.88E-61 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CKQ55_RS06535 44e83561dd5b53f8688a53ed6e4638bd 94 Gene3D G3DSA:2.60.120.10 3 93 3.3E-38 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS06535 44e83561dd5b53f8688a53ed6e4638bd 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 4.9E-37 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CKQ55_RS06535 44e83561dd5b53f8688a53ed6e4638bd 94 SUPERFAMILY SSF51182 1 94 4.45E-36 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS06535 44e83561dd5b53f8688a53ed6e4638bd 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 27.324 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 170 474 5.7E-102 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 SUPERFAMILY SSF53187 163 480 2.03E-98 T 29-03-2018 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 330 337 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 Gene3D G3DSA:3.40.630.10 153 485 1.3E-110 T 29-03-2018 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 PRINTS PR00481 Cytosol aminopeptidase signature 245 262 7.0E-43 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 PRINTS PR00481 Cytosol aminopeptidase signature 304 325 7.0E-43 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 PRINTS PR00481 Cytosol aminopeptidase signature 267 288 7.0E-43 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 PRINTS PR00481 Cytosol aminopeptidase signature 326 346 7.0E-43 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS26735 a118b7e8bc0a99e0b14c254e55065667 485 PRINTS PR00481 Cytosol aminopeptidase signature 356 371 7.0E-43 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CKQ55_RS30945 86d40fc6b0f9ccbe2f6f5b8b20e8f986 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 210 2.7E-48 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) CKQ55_RS30945 86d40fc6b0f9ccbe2f6f5b8b20e8f986 223 Gene3D G3DSA:3.90.1680.10 1 222 3.5E-62 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) CKQ55_RS30945 86d40fc6b0f9ccbe2f6f5b8b20e8f986 223 SUPERFAMILY SSF143081 2 222 1.7E-59 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) CKQ55_RS16335 9a0ba5e39020368a55847d19af575a14 130 Pfam PF07681 DoxX 9 87 6.5E-18 T 29-03-2018 IPR032808 DoxX family CKQ55_RS20540 381e2ab8f87ab678e3301c9046cb549d 350 Pfam PF12833 Helix-turn-helix domain 262 342 6.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS20540 381e2ab8f87ab678e3301c9046cb549d 350 Gene3D G3DSA:1.10.10.60 235 291 8.3E-13 T 29-03-2018 CKQ55_RS20540 381e2ab8f87ab678e3301c9046cb549d 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CKQ55_RS20540 381e2ab8f87ab678e3301c9046cb549d 350 SMART SM00342 256 342 6.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS20540 381e2ab8f87ab678e3301c9046cb549d 350 SUPERFAMILY SSF46689 240 290 1.25E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS20540 381e2ab8f87ab678e3301c9046cb549d 350 Gene3D G3DSA:1.10.10.60 292 349 1.2E-4 T 29-03-2018 CKQ55_RS17175 e3b7fbb7ada3f885bd197417ef417f8f 166 Pfam PF17283 SprT-like zinc ribbon domain 126 163 8.5E-10 T 29-03-2018 IPR035240 SprT-like, zinc ribbon domain CKQ55_RS17175 e3b7fbb7ada3f885bd197417ef417f8f 166 Pfam PF10263 SprT-like family 38 110 5.9E-17 T 29-03-2018 IPR006640 SprT-like CKQ55_RS17175 e3b7fbb7ada3f885bd197417ef417f8f 166 SMART SM00731 16 165 2.3E-58 T 29-03-2018 IPR006640 SprT-like CKQ55_RS17175 e3b7fbb7ada3f885bd197417ef417f8f 166 Hamap MF_00746 Protein SprT [sprT]. 12 165 40.604 T 29-03-2018 IPR023483 Uncharacterised protein family SprT CKQ55_RS21175 8cb36b446cc4b0a003e538a43c7ed5b0 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.802 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CKQ55_RS21175 8cb36b446cc4b0a003e538a43c7ed5b0 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 4.4E-145 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CKQ55_RS21175 8cb36b446cc4b0a003e538a43c7ed5b0 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 2.5E-88 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS04405 5c2ec77cd1be8ce08b7a9093cbbd4d8d 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 1.7E-34 T 29-03-2018 IPR025299 CstA, C-terminal domain CKQ55_RS04405 5c2ec77cd1be8ce08b7a9093cbbd4d8d 701 Pfam PF02554 Carbon starvation protein CstA 32 401 2.2E-169 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 122 136 4.7E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 35 56 4.7E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 166 183 4.7E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 66 74 4.7E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 92 109 4.7E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 22 29 4.7E-42 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 Gene3D G3DSA:3.40.1190.20 4 254 9.1E-52 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 16 257 29.764 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 Pfam PF02110 Hydroxyethylthiazole kinase family 17 252 5.5E-92 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 17 252 1.1E-85 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 PIRSF PIRSF000513 8 256 1.2E-91 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS22090 6feed7e6f0449660fb310542c48e5998 257 SUPERFAMILY SSF53613 11 253 2.18E-58 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS07230 e2f5d1b64ffee86038fdec8c101e57ff 404 SUPERFAMILY SSF53756 1 400 2.75E-75 T 29-03-2018 CKQ55_RS07230 e2f5d1b64ffee86038fdec8c101e57ff 404 Pfam PF00534 Glycosyl transferases group 1 231 378 4.6E-25 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS07230 e2f5d1b64ffee86038fdec8c101e57ff 404 Gene3D G3DSA:3.40.50.2000 225 383 1.4E-35 T 29-03-2018 CKQ55_RS07230 e2f5d1b64ffee86038fdec8c101e57ff 404 Pfam PF13439 Glycosyltransferase Family 4 14 220 2.1E-18 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CKQ55_RS07230 e2f5d1b64ffee86038fdec8c101e57ff 404 Gene3D G3DSA:3.40.50.2000 1 224 3.7E-15 T 29-03-2018 CKQ55_RS02025 2aa8f0179b73f68783cfad658917fe33 183 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 183 8.2E-62 T 29-03-2018 IPR010275 Protein of unknown function DUF882 CKQ55_RS02025 2aa8f0179b73f68783cfad658917fe33 183 Gene3D G3DSA:3.30.1380.10 60 183 5.9E-23 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CKQ55_RS02025 2aa8f0179b73f68783cfad658917fe33 183 SUPERFAMILY SSF55166 67 183 1.49E-32 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CKQ55_RS07730 dda8f59db0e593050a4030b7947e6c8b 125 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 15 119 8.6E-34 T 29-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CKQ55_RS07730 dda8f59db0e593050a4030b7947e6c8b 125 TIGRFAM TIGR01004 PulS_OutS: lipoprotein, PulS/OutS family 1 125 8.0E-61 T 29-03-2018 IPR005699 Chaperone lipoprotein, PulS/OutS GO:0006886|GO:0008565 CKQ55_RS23145 dc3b74c26417e567dfa22f8c3a9c91dd 66 Pfam PF13272 Putative 2/3 transmembrane domain holin 12 66 1.1E-20 T 29-03-2018 IPR025140 Putative 2/3 transmembrane domain holin CKQ55_RS01765 25d150ec4a502a9349a1bb9c2e058847 388 Gene3D G3DSA:1.50.10.10 21 388 3.1E-87 T 29-03-2018 CKQ55_RS01765 25d150ec4a502a9349a1bb9c2e058847 388 SUPERFAMILY SSF48208 29 380 1.36E-104 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS01765 25d150ec4a502a9349a1bb9c2e058847 388 Pfam PF07470 Glycosyl Hydrolase Family 88 49 379 9.7E-41 T 29-03-2018 IPR010905 Glycosyl hydrolase, family 88 CKQ55_RS03260 89fb2e69e7fce4b03ea767d9c98f4dff 321 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 1.1E-17 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 SUPERFAMILY SSF53659 2 359 7.49E-117 T 29-03-2018 CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 Gene3D G3DSA:3.40.718.10 213 360 1.9E-55 T 29-03-2018 CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 Gene3D G3DSA:3.40.718.10 1 212 2.1E-66 T 29-03-2018 CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 359 2.6E-167 T 29-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 SMART SM01329 6 355 4.0E-182 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS01195 cdc1d1ea8227cee398c617a4c9a89ffd 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 1.3E-86 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CKQ55_RS28485 dc627fdc765731bd7dcc485c13da0909 71 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.4E-13 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CKQ55_RS14760 5bc98af9e9c0066175a022f6bd5789bf 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 47 352 1.4E-148 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CKQ55_RS14760 5bc98af9e9c0066175a022f6bd5789bf 352 PIRSF PIRSF003097 50 348 1.7E-101 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CKQ55_RS25515 2d504be0f1907c9fab8e2a520c56b48c 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 325 4.8E-97 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS25515 2d504be0f1907c9fab8e2a520c56b48c 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 1.8E-42 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 Gene3D G3DSA:3.20.20.80 4 462 1.9E-124 T 29-03-2018 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 1.9E-8 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 1.9E-8 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 1.9E-8 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 1.9E-8 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 Pfam PF00232 Glycosyl hydrolase family 1 4 462 2.3E-107 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS19045 4c412c3cf512102281a0834bd888f153 466 SUPERFAMILY SSF51445 3 462 4.9E-135 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS02085 2673bf00e14c88f3bd2e5a2b0bab3900 326 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.096 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CKQ55_RS02085 2673bf00e14c88f3bd2e5a2b0bab3900 326 SUPERFAMILY SSF52540 46 163 7.44E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS02085 2673bf00e14c88f3bd2e5a2b0bab3900 326 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 318 1.4E-112 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CKQ55_RS02085 2673bf00e14c88f3bd2e5a2b0bab3900 326 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 321 5.0E-111 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CKQ55_RS02085 2673bf00e14c88f3bd2e5a2b0bab3900 326 Gene3D G3DSA:3.40.50.300 32 285 2.8E-8 T 29-03-2018 CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 SUPERFAMILY SSF52833 2 83 1.11E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.1E-36 T 29-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 Pfam PF00462 Glutaredoxin 6 63 1.4E-22 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 Gene3D G3DSA:3.40.30.10 3 83 5.9E-27 T 29-03-2018 CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 PRINTS PR00160 Glutaredoxin signature 4 22 1.3E-17 T 29-03-2018 IPR014025 Glutaredoxin subgroup CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 PRINTS PR00160 Glutaredoxin signature 46 59 1.3E-17 T 29-03-2018 IPR014025 Glutaredoxin subgroup CKQ55_RS13830 fa703bae3aba6ac17c470b32f65c64a7 83 PRINTS PR00160 Glutaredoxin signature 60 73 1.3E-17 T 29-03-2018 IPR014025 Glutaredoxin subgroup CKQ55_RS07330 baaafe659508b9ac51b6f2a0795ea716 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 1.4E-111 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 CKQ55_RS07330 baaafe659508b9ac51b6f2a0795ea716 255 SUPERFAMILY SSF56235 2 252 1.64E-51 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS07330 baaafe659508b9ac51b6f2a0795ea716 255 Gene3D G3DSA:3.60.20.10 1 255 1.2E-43 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS24925 d1eaac35852f27980d6ad2ef3bf97ebf 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 2.5E-68 T 29-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CKQ55_RS24925 d1eaac35852f27980d6ad2ef3bf97ebf 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 9.8E-193 T 29-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CKQ55_RS24925 d1eaac35852f27980d6ad2ef3bf97ebf 495 SUPERFAMILY SSF101960 41 86 1.05E-136 T 29-03-2018 CKQ55_RS24925 d1eaac35852f27980d6ad2ef3bf97ebf 495 SUPERFAMILY SSF101960 125 492 1.05E-136 T 29-03-2018 CKQ55_RS05320 5ea183dbc0691072e9b38f842e781387 200 SMART SM01040 40 135 1.0E-21 T 29-03-2018 IPR003497 BRO N-terminal domain CKQ55_RS05320 5ea183dbc0691072e9b38f842e781387 200 Pfam PF02498 BRO family, N-terminal domain 41 135 2.2E-16 T 29-03-2018 IPR003497 BRO N-terminal domain CKQ55_RS03775 a5c6dcfb2426b3ced2d9770b524bcb42 331 Pfam PF06166 Protein of unknown function (DUF979) 7 330 7.8E-127 T 29-03-2018 IPR009323 Protein of unknown function DUF979 CKQ55_RS23010 762722dbaae73fe6ac5a5f9e27e49d37 112 Gene3D G3DSA:3.30.160.220 55 107 2.6E-27 T 29-03-2018 IPR015051 Protein YoaG CKQ55_RS23010 762722dbaae73fe6ac5a5f9e27e49d37 112 Gene3D G3DSA:3.30.160.220 5 53 9.2E-21 T 29-03-2018 IPR015051 Protein YoaG CKQ55_RS23010 762722dbaae73fe6ac5a5f9e27e49d37 112 SUPERFAMILY SSF103063 54 112 9.42E-25 T 29-03-2018 IPR015051 Protein YoaG CKQ55_RS23010 762722dbaae73fe6ac5a5f9e27e49d37 112 Pfam PF08956 Domain of unknown function (DUF1869) 57 112 9.9E-34 T 29-03-2018 IPR015051 Protein YoaG CKQ55_RS12480 0fd7fed62c4394431acfa1a1145d73ef 335 Pfam PF00419 Fimbrial protein 196 334 6.4E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12480 0fd7fed62c4394431acfa1a1145d73ef 335 Gene3D G3DSA:2.60.40.1090 192 333 5.7E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS12480 0fd7fed62c4394431acfa1a1145d73ef 335 SUPERFAMILY SSF49401 193 333 1.79E-8 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS31155 0bb46ffa2d192217813f522726a6ab2e 62 Pfam PF11100 Conjugal transfer protein TrbE 2 46 2.7E-6 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE CKQ55_RS11350 b18c3c721552109d6d3b08dccd90400b 97 Pfam PF07362 Post-segregation antitoxin CcdA 27 97 7.2E-24 T 29-03-2018 IPR009956 Post-segregation antitoxin CcdA CKQ55_RS11350 b18c3c721552109d6d3b08dccd90400b 97 Gene3D G3DSA:1.10.1220.10 20 75 0.004 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS10025 4707cfc52ef1d7e78f11110a2b93afe0 167 Pfam PF00583 Acetyltransferase (GNAT) family 45 144 3.3E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS10025 4707cfc52ef1d7e78f11110a2b93afe0 167 SUPERFAMILY SSF55729 8 167 3.26E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS10025 4707cfc52ef1d7e78f11110a2b93afe0 167 Gene3D G3DSA:3.40.630.30 2 152 1.7E-28 T 29-03-2018 CKQ55_RS23395 7d9c5b507a74861a0d8a297b449dcba6 164 Gene3D G3DSA:3.40.960.10 21 156 1.3E-30 T 29-03-2018 CKQ55_RS23395 7d9c5b507a74861a0d8a297b449dcba6 164 SUPERFAMILY SSF52980 2 151 3.22E-50 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CKQ55_RS23395 7d9c5b507a74861a0d8a297b449dcba6 164 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 1.5E-33 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CKQ55_RS23395 7d9c5b507a74861a0d8a297b449dcba6 164 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 3.1E-48 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CKQ55_RS24485 782d049328d5610355d4012cc42fa8b4 294 Gene3D G3DSA:1.10.3720.10 42 294 1.1E-30 T 29-03-2018 CKQ55_RS24485 782d049328d5610355d4012cc42fa8b4 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 277 2.5E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24485 782d049328d5610355d4012cc42fa8b4 294 SUPERFAMILY SSF161098 100 279 5.36E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24485 782d049328d5610355d4012cc42fa8b4 294 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 86 280 2.1E-72 T 29-03-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 CKQ55_RS19695 35e241a883251ae937ad7a7650fe4dd3 96 Gene3D G3DSA:3.10.20.280 1 88 2.7E-33 T 29-03-2018 IPR005346 RnfH protein CKQ55_RS19695 35e241a883251ae937ad7a7650fe4dd3 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 24.568 T 29-03-2018 IPR005346 RnfH protein CKQ55_RS19695 35e241a883251ae937ad7a7650fe4dd3 96 SUPERFAMILY SSF54285 5 79 7.32E-26 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CKQ55_RS19695 35e241a883251ae937ad7a7650fe4dd3 96 Pfam PF03658 RnfH family Ubiquitin 5 87 6.8E-33 T 29-03-2018 IPR005346 RnfH protein CKQ55_RS07995 96e61839f42f68c6af1178c225a720c3 266 Pfam PF11453 Protein of unknown function (DUF2950) 22 264 7.1E-81 T 29-03-2018 IPR021556 Protein of unknown function DUF2950 CKQ55_RS07250 352aee12f32bf66afee949407c51d3c9 168 SUPERFAMILY SSF51161 30 165 5.41E-32 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS07250 352aee12f32bf66afee949407c51d3c9 168 Gene3D G3DSA:2.160.10.10 52 167 4.7E-24 T 29-03-2018 CKQ55_RS07250 352aee12f32bf66afee949407c51d3c9 168 PIRSF PIRSF000441 9 167 3.4E-38 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CKQ55_RS07250 352aee12f32bf66afee949407c51d3c9 168 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 77 102 0.036 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07250 352aee12f32bf66afee949407c51d3c9 168 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 116 149 2.0E-9 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS08655 29a604d5ca945bbdfa8d5530909ef9b5 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.901 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CKQ55_RS08655 29a604d5ca945bbdfa8d5530909ef9b5 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.9E-91 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CKQ55_RS25115 ad1a2e3f7a04c2e51807041ab84764bb 341 Gene3D G3DSA:1.10.3470.10 10 339 1.5E-56 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS25115 ad1a2e3f7a04c2e51807041ab84764bb 341 Pfam PF01032 FecCD transport family 26 338 2.4E-82 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS25115 ad1a2e3f7a04c2e51807041ab84764bb 341 SUPERFAMILY SSF81345 10 338 4.71E-74 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS01675 798260ef37130b104353af9865568b34 434 Gene3D G3DSA:1.20.1250.20 1 168 5.2E-25 T 29-03-2018 CKQ55_RS01675 798260ef37130b104353af9865568b34 434 Gene3D G3DSA:1.20.1250.20 231 434 1.2E-27 T 29-03-2018 CKQ55_RS01675 798260ef37130b104353af9865568b34 434 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 391 2.1E-75 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CKQ55_RS01675 798260ef37130b104353af9865568b34 434 SUPERFAMILY SSF103473 221 426 3.4E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01675 798260ef37130b104353af9865568b34 434 SUPERFAMILY SSF103473 1 173 3.4E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01675 798260ef37130b104353af9865568b34 434 Pfam PF07690 Major Facilitator Superfamily 1 382 2.0E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS16985 7526832b7aac9e62b089ad1d941e5e50 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 379 1.4E-143 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS16985 7526832b7aac9e62b089ad1d941e5e50 381 Gene3D G3DSA:3.40.640.10 2 247 4.0E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS16985 7526832b7aac9e62b089ad1d941e5e50 381 Gene3D G3DSA:3.90.1150.10 248 381 2.2E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS16985 7526832b7aac9e62b089ad1d941e5e50 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS16985 7526832b7aac9e62b089ad1d941e5e50 381 SUPERFAMILY SSF53383 14 380 2.04E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS16985 7526832b7aac9e62b089ad1d941e5e50 381 PIRSF PIRSF001434 1 381 3.1E-138 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CKQ55_RS20320 71f4d2cc8d54199b5f91c08df0761e58 213 Gene3D G3DSA:3.40.50.170 1 198 4.4E-70 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS20320 71f4d2cc8d54199b5f91c08df0761e58 213 Pfam PF00551 Formyl transferase 2 182 9.1E-68 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS20320 71f4d2cc8d54199b5f91c08df0761e58 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 1.1E-82 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CKQ55_RS20320 71f4d2cc8d54199b5f91c08df0761e58 213 SUPERFAMILY SSF53328 2 203 2.35E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS20320 71f4d2cc8d54199b5f91c08df0761e58 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.93 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CKQ55_RS20320 71f4d2cc8d54199b5f91c08df0761e58 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CKQ55_RS04075 8be6f2d7f99276c18216986b3888c39d 224 SUPERFAMILY SSF161098 14 210 2.62E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04075 8be6f2d7f99276c18216986b3888c39d 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 7.2E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS04075 8be6f2d7f99276c18216986b3888c39d 224 Gene3D G3DSA:1.10.3720.10 1 224 7.9E-41 T 29-03-2018 CKQ55_RS04075 8be6f2d7f99276c18216986b3888c39d 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.4E-24 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS13985 f14e4eec8ad1f29dcc69104029375616 418 SUPERFAMILY SSF53383 15 411 1.65E-58 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS13985 f14e4eec8ad1f29dcc69104029375616 418 Gene3D G3DSA:3.90.1150.10 300 413 5.2E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS13985 f14e4eec8ad1f29dcc69104029375616 418 Gene3D G3DSA:3.40.640.10 69 299 1.5E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS13985 f14e4eec8ad1f29dcc69104029375616 418 Pfam PF00155 Aminotransferase class I and II 69 400 1.8E-20 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS25045 477b3a5cb49d232d03d3ec9f32605b56 398 Gene3D G3DSA:1.20.1250.20 6 199 1.4E-34 T 29-03-2018 CKQ55_RS25045 477b3a5cb49d232d03d3ec9f32605b56 398 Gene3D G3DSA:1.20.1250.20 202 395 1.5E-21 T 29-03-2018 CKQ55_RS25045 477b3a5cb49d232d03d3ec9f32605b56 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS25045 477b3a5cb49d232d03d3ec9f32605b56 398 SUPERFAMILY SSF103473 7 394 3.4E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS25045 477b3a5cb49d232d03d3ec9f32605b56 398 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS25045 477b3a5cb49d232d03d3ec9f32605b56 398 Pfam PF07690 Major Facilitator Superfamily 20 295 1.6E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS21130 126aca0199d636cdb2c682f5c2f0789b 166 SUPERFAMILY SSF52833 16 165 7.83E-49 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS21130 126aca0199d636cdb2c682f5c2f0789b 166 Gene3D G3DSA:3.40.30.10 84 166 3.9E-12 T 29-03-2018 CKQ55_RS21130 126aca0199d636cdb2c682f5c2f0789b 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21130 126aca0199d636cdb2c682f5c2f0789b 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 1.5E-52 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21130 126aca0199d636cdb2c682f5c2f0789b 166 PIRSF PIRSF000216 1 166 2.1E-53 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21130 126aca0199d636cdb2c682f5c2f0789b 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 166 9.5E-50 T 29-03-2018 CKQ55_RS03045 4a905e93c605ab6170ac27eebaf8701c 433 Gene3D G3DSA:1.20.1250.20 13 215 4.2E-40 T 29-03-2018 CKQ55_RS03045 4a905e93c605ab6170ac27eebaf8701c 433 Pfam PF07690 Major Facilitator Superfamily 30 378 1.6E-53 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS03045 4a905e93c605ab6170ac27eebaf8701c 433 Gene3D G3DSA:1.20.1250.20 230 433 2.1E-20 T 29-03-2018 CKQ55_RS03045 4a905e93c605ab6170ac27eebaf8701c 433 SUPERFAMILY SSF103473 15 431 1.29E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS27955 9a640eb33cef36478d6f122caaaaebf1 348 Gene3D G3DSA:2.40.160.10 49 347 1.2E-15 T 29-03-2018 CKQ55_RS27955 9a640eb33cef36478d6f122caaaaebf1 348 SUPERFAMILY SSF56935 52 330 4.35E-18 T 29-03-2018 CKQ55_RS29130 a1a49cd3a63b85a9de5f33f3732455ed 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 225 1.8E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29130 a1a49cd3a63b85a9de5f33f3732455ed 256 Gene3D G3DSA:1.10.3720.10 7 231 9.8E-39 T 29-03-2018 CKQ55_RS29130 a1a49cd3a63b85a9de5f33f3732455ed 256 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 119 2.4E-25 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS29130 a1a49cd3a63b85a9de5f33f3732455ed 256 SUPERFAMILY SSF161098 24 217 4.45E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS31520 624f19f43d5cb782707f66d9b3af4b22 101 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 9 100 5.0E-41 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS31520 624f19f43d5cb782707f66d9b3af4b22 101 SUPERFAMILY SSF50118 1 101 1.77E-31 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS31520 624f19f43d5cb782707f66d9b3af4b22 101 Pfam PF01845 CcdB protein 2 100 8.4E-28 T 29-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CKQ55_RS31520 624f19f43d5cb782707f66d9b3af4b22 101 Gene3D G3DSA:2.30.30.110 2 100 3.5E-20 T 29-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CKQ55_RS14035 c95933ba32dcaf707280b29170ec2c93 124 Pfam PF05360 yiaA/B two helix domain 62 107 7.5E-8 T 29-03-2018 IPR008024 YiaAB two helix CKQ55_RS14035 c95933ba32dcaf707280b29170ec2c93 124 Pfam PF05360 yiaA/B two helix domain 7 52 2.0E-8 T 29-03-2018 IPR008024 YiaAB two helix CKQ55_RS29320 3da8ea7b00fba3ac0e494f1d93ea8b87 222 Gene3D G3DSA:1.20.1170.10 4 222 1.4E-4 T 29-03-2018 CKQ55_RS29320 3da8ea7b00fba3ac0e494f1d93ea8b87 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.3E-92 T 29-03-2018 IPR014319 Phage shock protein, PspA CKQ55_RS29320 3da8ea7b00fba3ac0e494f1d93ea8b87 222 Pfam PF04012 PspA/IM30 family 2 216 1.2E-48 T 29-03-2018 IPR007157 PspA/IM30 CKQ55_RS27390 04220ea9ffb66af0e93a40ff7b8e97ea 307 Gene3D G3DSA:3.20.20.150 1 305 4.6E-53 T 29-03-2018 CKQ55_RS27390 04220ea9ffb66af0e93a40ff7b8e97ea 307 Pfam PF01261 Xylose isomerase-like TIM barrel 29 259 8.1E-32 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS27390 04220ea9ffb66af0e93a40ff7b8e97ea 307 SUPERFAMILY SSF51658 3 305 6.55E-50 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS30335 f79bff647964462bbaf112d0425e09a9 317 Pfam PF04754 Putative transposase, YhgA-like 9 209 3.8E-86 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS30335 f79bff647964462bbaf112d0425e09a9 317 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 268 3.0E-69 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS30335 f79bff647964462bbaf112d0425e09a9 317 Gene3D G3DSA:1.10.10.60 247 315 0.0063 T 29-03-2018 CKQ55_RS22590 7ca58ad80226cca3957e6d668233d8bd 477 Pfam PF14052 Capsule assembly protein Wzi 92 466 2.5E-114 T 29-03-2018 IPR026950 Capsule assembly protein Wzi CKQ55_RS06935 9003437b361a8f9cb2d93175176f01fe 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.5E-19 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 Gene3D G3DSA:3.40.50.1980 15 172 3.1E-43 T 29-03-2018 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 Gene3D G3DSA:3.40.50.1980 173 292 2.0E-36 T 29-03-2018 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00691 Adhesin B signature 67 86 5.5E-22 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00691 Adhesin B signature 178 195 5.5E-22 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00691 Adhesin B signature 23 44 5.5E-22 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00691 Adhesin B signature 48 66 5.5E-22 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00691 Adhesin B signature 227 244 5.5E-22 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00691 Adhesin B signature 270 288 5.5E-22 T 29-03-2018 IPR006129 Adhesin B GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 SUPERFAMILY SSF53807 21 291 1.08E-79 T 29-03-2018 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 288 7.6E-76 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00690 Adhesin family signature 54 67 1.2E-27 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00690 Adhesin family signature 67 84 1.2E-27 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00690 Adhesin family signature 231 249 1.2E-27 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00690 Adhesin family signature 178 199 1.2E-27 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00690 Adhesin family signature 257 276 1.2E-27 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS19235 09592c68d823e211f44e062d09af61b5 292 PRINTS PR00690 Adhesin family signature 23 41 1.2E-27 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CKQ55_RS30465 099878e335df13136960af95e9c9cb51 88 Pfam PF10723 Replication regulatory protein RepB 1 79 4.4E-26 T 29-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 CKQ55_RS30465 099878e335df13136960af95e9c9cb51 88 Gene3D G3DSA:1.10.1220.10 2 83 1.3E-8 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS30465 099878e335df13136960af95e9c9cb51 88 SUPERFAMILY SSF47598 32 82 1.11E-7 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 SUPERFAMILY SSF50249 4 75 1.88E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 4.5E-37 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 Gene3D G3DSA:2.40.50.140 1 76 6.0E-26 T 29-03-2018 CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 Pfam PF11967 Recombination protein O N terminal 4 76 9.8E-23 T 29-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 SUPERFAMILY SSF57863 86 161 2.14E-7 T 29-03-2018 CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.093 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CKQ55_RS19970 4b7c729d5b168f8e515504101e18b083 245 Pfam PF02565 Recombination protein O C terminal 83 226 4.5E-22 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CKQ55_RS02620 64f0b3cb5c5b91e846481954c83414a9 412 Gene3D G3DSA:1.20.1250.20 204 392 8.8E-14 T 29-03-2018 CKQ55_RS02620 64f0b3cb5c5b91e846481954c83414a9 412 Gene3D G3DSA:1.20.1250.20 1 203 7.3E-14 T 29-03-2018 CKQ55_RS02620 64f0b3cb5c5b91e846481954c83414a9 412 SUPERFAMILY SSF103473 1 392 3.4E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 Gene3D G3DSA:3.30.565.10 215 389 6.3E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 SUPERFAMILY SSF55874 223 392 2.75E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 SMART SM00387 278 390 4.0E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 233 1.3E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 2.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 SMART SM00388 170 233 6.1E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 388 1.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 Gene3D G3DSA:1.10.287.130 152 214 2.1E-9 T 29-03-2018 CKQ55_RS01015 5bb8f06ca1bb3212e04182db6d4f3fbc 398 SUPERFAMILY SSF47384 153 234 1.75E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CKQ55_RS09165 5f228f2752017102ca857fd23e9c1960 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS09165 5f228f2752017102ca857fd23e9c1960 412 SUPERFAMILY SSF103473 18 402 5.89E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS09165 5f228f2752017102ca857fd23e9c1960 412 Gene3D G3DSA:1.20.1250.20 7 200 3.2E-27 T 29-03-2018 CKQ55_RS09165 5f228f2752017102ca857fd23e9c1960 412 Gene3D G3DSA:1.20.1250.20 208 410 1.2E-10 T 29-03-2018 CKQ55_RS09165 5f228f2752017102ca857fd23e9c1960 412 Pfam PF07690 Major Facilitator Superfamily 26 354 1.8E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS13560 27f0f41f87f4b72d692bcdf0355b81e8 519 Pfam PF02378 Phosphotransferase system, EIIC 17 350 4.6E-57 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS13560 27f0f41f87f4b72d692bcdf0355b81e8 519 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 502 9.2E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS13560 27f0f41f87f4b72d692bcdf0355b81e8 519 Pfam PF00367 phosphotransferase system, EIIB 446 478 7.3E-14 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS13560 27f0f41f87f4b72d692bcdf0355b81e8 519 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 456 473 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CKQ55_RS13560 27f0f41f87f4b72d692bcdf0355b81e8 519 SUPERFAMILY SSF55604 444 515 7.06E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS13560 27f0f41f87f4b72d692bcdf0355b81e8 519 Gene3D G3DSA:3.30.1360.60 441 516 3.2E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CKQ55_RS10810 42c6f6f0c2f1bd66642468ec1892e058 101 Gene3D G3DSA:1.10.1660.10 1 101 2.3E-10 T 29-03-2018 CKQ55_RS10810 42c6f6f0c2f1bd66642468ec1892e058 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 5.5E-27 T 29-03-2018 CKQ55_RS30375 060521d8d92b1aad1c4706090924adb2 293 Pfam PF01609 Transposase DDE domain 127 287 1.8E-16 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS26700 edb16aee238b3137a8a9dffcc776d8dd 250 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 121 4.5E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS26700 edb16aee238b3137a8a9dffcc776d8dd 250 Gene3D G3DSA:1.10.3720.10 2 231 6.8E-36 T 29-03-2018 CKQ55_RS26700 edb16aee238b3137a8a9dffcc776d8dd 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 218 8.2E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS26700 edb16aee238b3137a8a9dffcc776d8dd 250 SUPERFAMILY SSF161098 14 215 6.54E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02255 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 3.1E-35 T 29-03-2018 CKQ55_RS02255 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CKQ55_RS02255 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS02255 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CKQ55_RS02255 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CKQ55_RS02255 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 CKQ55_RS08120 f1d91ae1592ce4f5085447b4d97909a8 277 Pfam PF03799 Cell division protein FtsQ 131 248 4.8E-26 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB CKQ55_RS08120 f1d91ae1592ce4f5085447b4d97909a8 277 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 27 256 25.596 T 29-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 CKQ55_RS08120 f1d91ae1592ce4f5085447b4d97909a8 277 Pfam PF08478 POTRA domain, FtsQ-type 58 127 4.1E-21 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type CKQ55_RS29665 266a2b9433ed5a5a5404b9d671ffb1aa 112 Pfam PF04355 SmpA / OmlA family 31 96 1.3E-11 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CKQ55_RS29665 266a2b9433ed5a5a5404b9d671ffb1aa 112 Gene3D G3DSA:3.30.1450.10 23 98 3.0E-6 T 29-03-2018 CKQ55_RS16475 ae95cb98a0e22846e4ce6916f1ac4747 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 76 1.3E-17 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CKQ55_RS16475 ae95cb98a0e22846e4ce6916f1ac4747 98 Gene3D G3DSA:3.30.70.100 2 91 1.5E-22 T 29-03-2018 CKQ55_RS16475 ae95cb98a0e22846e4ce6916f1ac4747 98 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.268 T 29-03-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 CKQ55_RS16475 ae95cb98a0e22846e4ce6916f1ac4747 98 SUPERFAMILY SSF54909 1 91 5.78E-24 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS24680 71a9a55b48409b1fab0451e8b9769b19 98 Pfam PF03795 YCII-related domain 2 94 5.3E-26 T 29-03-2018 IPR005545 YCII-related CKQ55_RS24680 71a9a55b48409b1fab0451e8b9769b19 98 Gene3D G3DSA:3.30.70.1060 1 98 2.5E-27 T 29-03-2018 CKQ55_RS24680 71a9a55b48409b1fab0451e8b9769b19 98 SUPERFAMILY SSF54909 2 98 8.04E-30 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS01605 9bb8653ece3a8f2b9d4f5b38e8259933 300 SUPERFAMILY SSF103481 189 294 5.75E-9 T 29-03-2018 CKQ55_RS01605 9bb8653ece3a8f2b9d4f5b38e8259933 300 SUPERFAMILY SSF103481 37 139 7.06E-12 T 29-03-2018 CKQ55_RS01605 9bb8653ece3a8f2b9d4f5b38e8259933 300 Pfam PF00892 EamA-like transporter family 152 291 8.5E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS01605 9bb8653ece3a8f2b9d4f5b38e8259933 300 Pfam PF00892 EamA-like transporter family 2 135 1.3E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS14420 b16d883c52bb6d9c37f050f766111f7b 78 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 24.271 T 29-03-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CKQ55_RS14420 b16d883c52bb6d9c37f050f766111f7b 78 SUPERFAMILY SSF46785 1 77 5.06E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14420 b16d883c52bb6d9c37f050f766111f7b 78 Gene3D G3DSA:1.10.10.10 1 76 3.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14420 b16d883c52bb6d9c37f050f766111f7b 78 Pfam PF09012 FeoC like transcriptional regulator 3 69 9.4E-16 T 29-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC CKQ55_RS16935 de7efe7759dc2d2312e431019c3e46c2 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 95 1.0E-32 T 29-03-2018 IPR022574 Protein of unknown function DUF2623 CKQ55_RS16935 de7efe7759dc2d2312e431019c3e46c2 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 1.4E-46 T 29-03-2018 IPR022574 Protein of unknown function DUF2623 CKQ55_RS03950 6ffc45b339e7604292933265d797e64b 467 Gene3D G3DSA:2.40.160.10 2 467 8.1E-98 T 29-03-2018 CKQ55_RS03950 6ffc45b339e7604292933265d797e64b 467 Pfam PF03573 outer membrane porin, OprD family 33 431 1.4E-26 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CKQ55_RS28065 a1355abccad44f2621083c3c71e2f470 77 Pfam PF10829 Protein of unknown function (DUF2554) 1 73 3.5E-27 T 29-03-2018 IPR020117 Uncharacterised protein family YncJ CKQ55_RS28065 a1355abccad44f2621083c3c71e2f470 77 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 1 72 2.0E-17 T 29-03-2018 IPR020117 Uncharacterised protein family YncJ CKQ55_RS00625 21e943836fc30ee68010992be560e4c1 320 Gene3D G3DSA:1.10.10.60 1 55 7.5E-15 T 29-03-2018 CKQ55_RS00625 21e943836fc30ee68010992be560e4c1 320 Gene3D G3DSA:3.40.50.1360 59 320 3.4E-34 T 29-03-2018 CKQ55_RS00625 21e943836fc30ee68010992be560e4c1 320 Pfam PF04545 Sigma-70, region 4 16 48 3.8E-6 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CKQ55_RS00625 21e943836fc30ee68010992be560e4c1 320 SUPERFAMILY SSF100950 65 314 1.08E-67 T 29-03-2018 CKQ55_RS00625 21e943836fc30ee68010992be560e4c1 320 Pfam PF04198 Putative sugar-binding domain 61 315 2.6E-78 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CKQ55_RS18615 a7989949d3236797f6ceeb78867ddfe7 120 SUPERFAMILY SSF55620 3 119 1.06E-40 T 29-03-2018 CKQ55_RS18615 a7989949d3236797f6ceeb78867ddfe7 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.2E-33 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CKQ55_RS18615 a7989949d3236797f6ceeb78867ddfe7 120 Gene3D G3DSA:3.30.479.10 1 120 1.8E-39 T 29-03-2018 CKQ55_RS18615 a7989949d3236797f6ceeb78867ddfe7 120 PIRSF PIRSF006113 1 120 4.0E-55 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CKQ55_RS18615 a7989949d3236797f6ceeb78867ddfe7 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 2.9E-34 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CKQ55_RS18615 a7989949d3236797f6ceeb78867ddfe7 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 120 2.9E-37 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CKQ55_RS04275 b662c78d179808082495e316f2d3e6a1 326 Gene3D G3DSA:3.40.50.2300 19 144 2.0E-19 T 29-03-2018 CKQ55_RS04275 b662c78d179808082495e316f2d3e6a1 326 Gene3D G3DSA:3.40.50.2300 145 290 2.9E-22 T 29-03-2018 CKQ55_RS04275 b662c78d179808082495e316f2d3e6a1 326 Pfam PF13407 Periplasmic binding protein domain 35 294 2.5E-45 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS04275 b662c78d179808082495e316f2d3e6a1 326 SUPERFAMILY SSF53822 32 307 2.04E-48 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS28345 a48699e3d8ce537751922b73bf081493 309 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 7 295 1.3E-155 T 29-03-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.14+1.14.13.149|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176 CKQ55_RS28345 a48699e3d8ce537751922b73bf081493 309 SUPERFAMILY SSF47240 27 269 3.32E-81 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS28345 a48699e3d8ce537751922b73bf081493 309 Gene3D G3DSA:1.10.620.20 2 288 3.6E-77 T 29-03-2018 CKQ55_RS28345 a48699e3d8ce537751922b73bf081493 309 Pfam PF05138 Phenylacetic acid catabolic protein 17 291 2.3E-98 T 29-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 CKQ55_RS12900 903f994eddfc683e5f4eadce7d4f6a3d 126 Pfam PF03899 ATP synthase I chain 13 108 2.6E-14 T 29-03-2018 IPR005598 ATP synthase protein I CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PIRSF PIRSF002869 1 511 6.4E-180 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 1.7E-168 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.5E-87 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.408 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS00840 20dff86ad3ed3dfe48eff573a1c5826f 511 Pfam PF03023 MviN-like protein 28 478 3.1E-154 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CKQ55_RS20950 0044b7dc8e51eee11bdb0563ef3e67f2 162 Pfam PF02674 Colicin V production protein 4 141 1.1E-36 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CKQ55_RS00895 27a3fbf9c361044015838b0a91ce1896 37 Pfam PF10968 Protein of unknown function (DUF2770) 1 36 2.6E-18 T 29-03-2018 IPR024494 Protein of unknown function DUF2770 CKQ55_RS16460 15bf3bd12e65e79c4482325897b95767 330 Gene3D G3DSA:1.10.3470.10 9 308 2.2E-25 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS16460 15bf3bd12e65e79c4482325897b95767 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 303 6.0E-44 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 SUPERFAMILY SSF50814 12 173 1.06E-47 T 29-03-2018 IPR012674 Calycin CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 Pfam PF08212 Lipocalin-like domain 35 173 4.5E-43 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 29-03-2018 IPR022272 Lipocalin family conserved site CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 51 67 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 163 173 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 121 129 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 136 147 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 34 48 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 104 118 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PRINTS PR01171 Bacterial lipocalin signature 70 79 4.8E-42 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 Gene3D G3DSA:2.40.128.20 2 175 8.9E-44 T 29-03-2018 IPR012674 Calycin CKQ55_RS24255 fbb55a4a45308797bc97765b28527438 175 PIRSF PIRSF036893 3 175 6.8E-47 T 29-03-2018 IPR022271 Lipocalin, ApoD type CKQ55_RS01440 d8c5ffef4ed29b94997407a882518bdc 252 Gene3D G3DSA:3.40.30.10 109 249 2.7E-17 T 29-03-2018 CKQ55_RS01440 d8c5ffef4ed29b94997407a882518bdc 252 Gene3D G3DSA:3.10.450.70 26 89 1.5E-23 T 29-03-2018 CKQ55_RS01440 d8c5ffef4ed29b94997407a882518bdc 252 SUPERFAMILY SSF54423 31 80 7.98E-16 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CKQ55_RS01440 d8c5ffef4ed29b94997407a882518bdc 252 SUPERFAMILY SSF52833 90 247 2.94E-32 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS01440 d8c5ffef4ed29b94997407a882518bdc 252 Pfam PF13098 Thioredoxin-like domain 118 247 6.7E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS06510 9ffafdf06c56cd2a0474ad47d99150bb 400 Gene3D G3DSA:3.60.21.10 63 276 9.2E-23 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS06510 9ffafdf06c56cd2a0474ad47d99150bb 400 Gene3D G3DSA:3.60.21.10 1 62 2.4E-17 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS06510 9ffafdf06c56cd2a0474ad47d99150bb 400 Pfam PF00149 Calcineurin-like phosphoesterase 1 224 1.2E-15 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS06510 9ffafdf06c56cd2a0474ad47d99150bb 400 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 373 8.6E-22 T 29-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CKQ55_RS06510 9ffafdf06c56cd2a0474ad47d99150bb 400 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 253 1.3E-83 T 29-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CKQ55_RS06510 9ffafdf06c56cd2a0474ad47d99150bb 400 SUPERFAMILY SSF56300 1 335 1.49E-60 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS16790 bbbd703867988b537154c6695d5347eb 222 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 222 36.682 T 29-03-2018 IPR009576 Biofilm formation YgiB CKQ55_RS16790 bbbd703867988b537154c6695d5347eb 222 Pfam PF06693 Protein of unknown function (DUF1190) 41 208 2.2E-56 T 29-03-2018 IPR009576 Biofilm formation YgiB CKQ55_RS07045 7f7fcced73055899ee8db911ecd809bd 185 Gene3D G3DSA:2.60.120.10 107 185 2.2E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS07045 7f7fcced73055899ee8db911ecd809bd 185 Pfam PF05962 HutD 10 165 8.2E-43 T 29-03-2018 IPR010282 Uncharacterised protein family HutD/Ves CKQ55_RS07045 7f7fcced73055899ee8db911ecd809bd 185 Gene3D G3DSA:2.60.120.10 7 106 2.3E-33 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS07045 7f7fcced73055899ee8db911ecd809bd 185 SUPERFAMILY SSF51182 1 182 1.69E-45 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 Pfam PF00664 ABC transporter transmembrane region 25 292 1.4E-47 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 4.0E-187 T 29-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 Gene3D G3DSA:1.20.1560.10 7 334 1.6E-40 T 29-03-2018 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 Gene3D G3DSA:3.40.50.300 335 588 6.2E-60 T 29-03-2018 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 Pfam PF00005 ABC transporter 369 513 2.1E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 SUPERFAMILY SSF90123 11 331 1.09E-53 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 SMART SM00382 375 560 3.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02235 fb723d3ff9f4406efac21a250fd6333b 588 SUPERFAMILY SSF52540 350 582 3.65E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 Pfam PF03466 LysR substrate binding domain 90 284 4.9E-32 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 SUPERFAMILY SSF53850 90 289 2.53E-32 T 29-03-2018 CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 Gene3D G3DSA:3.40.190.10 189 293 4.1E-5 T 29-03-2018 CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 Gene3D G3DSA:3.40.190.10 87 188 3.7E-14 T 29-03-2018 CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 SUPERFAMILY SSF46785 4 88 9.91E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 Gene3D G3DSA:1.10.10.10 2 85 3.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26960 05fa64b022d0f93d2e8fdd42ae95530f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.1E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 2.4E-67 T 29-03-2018 CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 5.9E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 5.9E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.9E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.9E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.9E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 5.9E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 SUPERFAMILY SSF51735 14 259 1.22E-78 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 Gene3D G3DSA:3.40.50.720 5 261 1.4E-70 T 29-03-2018 CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS04550 61c2d30aed194ed50a974a2aea1375c7 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS07605 25e88731cb8ffa98146633d06a26f126 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.1E-103 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CKQ55_RS07605 25e88731cb8ffa98146633d06a26f126 241 Gene3D G3DSA:3.40.1160.10 2 241 2.6E-43 T 29-03-2018 CKQ55_RS07605 25e88731cb8ffa98146633d06a26f126 241 Pfam PF00696 Amino acid kinase family 10 219 1.2E-27 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS07605 25e88731cb8ffa98146633d06a26f126 241 PIRSF PIRSF005650 4 241 3.5E-89 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CKQ55_RS07605 25e88731cb8ffa98146633d06a26f126 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.467 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CKQ55_RS07605 25e88731cb8ffa98146633d06a26f126 241 SUPERFAMILY SSF53633 7 240 3.53E-72 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CKQ55_RS19295 f73dddfd546ca149907722b8e03a2bdc 104 SMART SM00749 42 104 1.8E-9 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CKQ55_RS19295 f73dddfd546ca149907722b8e03a2bdc 104 Pfam PF04972 BON domain 37 104 1.6E-16 T 29-03-2018 IPR007055 BON domain CKQ55_RS19295 f73dddfd546ca149907722b8e03a2bdc 104 Gene3D G3DSA:3.40.190.10 1 96 1.5E-5 T 29-03-2018 CKQ55_RS08880 9d2cbb57331c53b9f3df5b408a672a75 152 SUPERFAMILY SSF55826 4 151 5.23E-40 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS08880 9d2cbb57331c53b9f3df5b408a672a75 152 Pfam PF04073 Aminoacyl-tRNA editing domain 24 141 1.1E-28 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS08880 9d2cbb57331c53b9f3df5b408a672a75 152 Gene3D G3DSA:3.90.960.10 2 152 2.9E-37 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 ProSitePatterns PS00213 Lipocalin signature. 35 46 - T 29-03-2018 IPR022272 Lipocalin family conserved site CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PIRSF PIRSF036893 1 176 4.1E-48 T 29-03-2018 IPR022271 Lipocalin, ApoD type CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 SUPERFAMILY SSF50814 13 174 4.36E-49 T 29-03-2018 IPR012674 Calycin CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 Pfam PF08212 Lipocalin-like domain 37 174 4.0E-43 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 Gene3D G3DSA:2.40.128.20 1 175 7.2E-47 T 29-03-2018 IPR012674 Calycin CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 121 129 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 34 48 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 70 79 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 163 173 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 104 118 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 51 67 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS10630 27d8b341b3ebf6963d2fa875d0deda8c 176 PRINTS PR01171 Bacterial lipocalin signature 136 147 3.6E-43 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CKQ55_RS24205 5587322a3c4f5a32cdea5e0e182a322a 266 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 89 248 1.3E-22 T 29-03-2018 CKQ55_RS24205 5587322a3c4f5a32cdea5e0e182a322a 266 SUPERFAMILY SSF53850 75 225 2.01E-15 T 29-03-2018 CKQ55_RS24205 5587322a3c4f5a32cdea5e0e182a322a 266 Gene3D G3DSA:3.40.190.10 90 197 4.0E-18 T 29-03-2018 CKQ55_RS14675 cfcb1ffec5360fefabedb3aacdc8d18e 85 Pfam PF00550 Phosphopantetheine attachment site 8 62 6.4E-6 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS14675 cfcb1ffec5360fefabedb3aacdc8d18e 85 Gene3D G3DSA:1.10.1200.10 2 85 8.7E-15 T 29-03-2018 CKQ55_RS14675 cfcb1ffec5360fefabedb3aacdc8d18e 85 SUPERFAMILY SSF47336 3 83 1.96E-10 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CKQ55_RS04560 7aa4ceebd882d01d2997fe650699ae18 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 501 2.4E-176 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04560 7aa4ceebd882d01d2997fe650699ae18 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 4.1E-179 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CKQ55_RS04560 7aa4ceebd882d01d2997fe650699ae18 677 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS11095 379521c36e5f007092249a0c09a29e68 138 PIRSF PIRSF004681 1 138 7.6E-42 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CKQ55_RS11095 379521c36e5f007092249a0c09a29e68 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CKQ55_RS11095 379521c36e5f007092249a0c09a29e68 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 133 4.4E-35 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CKQ55_RS11095 379521c36e5f007092249a0c09a29e68 138 SUPERFAMILY SSF111038 1 138 1.57E-45 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CKQ55_RS11095 379521c36e5f007092249a0c09a29e68 138 Gene3D G3DSA:2.60.120.460 1 138 9.0E-56 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CKQ55_RS11095 379521c36e5f007092249a0c09a29e68 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 138 9.5E-47 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Pfam PF04205 FMN-binding domain 397 461 2.7E-5 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 483 916 3.4E-148 T 29-03-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Gene3D G3DSA:3.20.20.70 1 353 1.5E-97 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 SUPERFAMILY SSF51395 4 349 2.52E-96 T 29-03-2018 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Gene3D G3DSA:3.90.700.10 749 842 2.3E-32 T 29-03-2018 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Gene3D G3DSA:3.50.50.60 464 748 6.1E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Gene3D G3DSA:3.50.50.60 843 925 3.7E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 SMART SM00900 382 464 0.005 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 SUPERFAMILY SSF56425 719 865 4.64E-44 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 341 8.5E-70 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 SUPERFAMILY SSF51905 478 736 4.95E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 SUPERFAMILY SSF51905 864 922 4.95E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS26010 5cd32d116f82d6bf991e24c53abc5f1e 925 Pfam PF00890 FAD binding domain 483 905 6.2E-87 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CKQ55_RS28565 89bf4b078c49b28966a29914579e763d 276 SMART SM00062 33 262 9.3E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS28565 89bf4b078c49b28966a29914579e763d 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 55 68 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CKQ55_RS28565 89bf4b078c49b28966a29914579e763d 276 Gene3D G3DSA:3.40.190.10 24 128 6.5E-19 T 29-03-2018 CKQ55_RS28565 89bf4b078c49b28966a29914579e763d 276 Gene3D G3DSA:3.40.190.10 129 219 6.9E-10 T 29-03-2018 CKQ55_RS28565 89bf4b078c49b28966a29914579e763d 276 SUPERFAMILY SSF53850 1 259 3.08E-42 T 29-03-2018 CKQ55_RS28565 89bf4b078c49b28966a29914579e763d 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 260 2.8E-40 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS26430 7d5611a50c3887ac1b23ca3bf0bbdd46 72 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 21 72 4.0E-12 T 29-03-2018 IPR025732 MarB protein CKQ55_RS26430 7d5611a50c3887ac1b23ca3bf0bbdd46 72 Pfam PF13999 MarB protein 6 70 1.1E-34 T 29-03-2018 IPR025732 MarB protein CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 SUPERFAMILY SSF46785 21 99 2.77E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 1.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 6.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 6.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 Pfam PF03466 LysR substrate binding domain 118 311 1.9E-20 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 SUPERFAMILY SSF53850 106 312 1.65E-37 T 29-03-2018 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 Gene3D G3DSA:3.40.190.10 198 285 1.0E-8 T 29-03-2018 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 Gene3D G3DSA:3.40.190.10 111 197 4.7E-9 T 29-03-2018 CKQ55_RS01410 00e37e8b7e1b9073ac4a0bfa076af711 315 Gene3D G3DSA:1.10.10.10 19 101 2.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS01690 ee1182f649568ecb733f10f1f7b93dda 270 Gene3D G3DSA:3.40.190.10 186 267 5.7E-8 T 29-03-2018 CKQ55_RS01690 ee1182f649568ecb733f10f1f7b93dda 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 261 8.8E-45 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS01690 ee1182f649568ecb733f10f1f7b93dda 270 Gene3D G3DSA:3.40.190.10 26 185 5.1E-27 T 29-03-2018 CKQ55_RS01690 ee1182f649568ecb733f10f1f7b93dda 270 SMART SM00062 36 265 2.7E-40 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CKQ55_RS01690 ee1182f649568ecb733f10f1f7b93dda 270 SUPERFAMILY SSF53850 14 262 1.29E-47 T 29-03-2018 CKQ55_RS11170 df02fdffed1869f6bdb0612c74c105e9 289 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site CKQ55_RS11170 df02fdffed1869f6bdb0612c74c105e9 289 Pfam PF01040 UbiA prenyltransferase family 28 271 5.8E-68 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CKQ55_RS11170 df02fdffed1869f6bdb0612c74c105e9 289 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.391 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CKQ55_RS11170 df02fdffed1869f6bdb0612c74c105e9 289 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 3.7E-111 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CKQ55_RS20375 64f4ea4b10a2bc067a7b45e8de1353ca 156 PIRSF PIRSF000239 1 153 2.6E-17 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS20375 64f4ea4b10a2bc067a7b45e8de1353ca 156 Pfam PF00578 AhpC/TSA family 7 134 1.7E-38 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CKQ55_RS20375 64f4ea4b10a2bc067a7b45e8de1353ca 156 Gene3D G3DSA:3.40.30.10 1 154 6.8E-42 T 29-03-2018 CKQ55_RS20375 64f4ea4b10a2bc067a7b45e8de1353ca 156 SUPERFAMILY SSF52833 3 154 1.4E-49 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS25425 40f646bcd3c59e782429d60c84bdd4d0 316 SUPERFAMILY SSF161098 97 296 6.67E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25425 40f646bcd3c59e782429d60c84bdd4d0 316 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 1.9E-12 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS25425 40f646bcd3c59e782429d60c84bdd4d0 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 312 7.9E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25425 40f646bcd3c59e782429d60c84bdd4d0 316 Gene3D G3DSA:1.10.3720.10 28 301 4.6E-44 T 29-03-2018 CKQ55_RS14590 f41f902c3c560813d7241f45be0b8438 551 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 551 43.468 T 29-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 CKQ55_RS14590 f41f902c3c560813d7241f45be0b8438 551 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 4 237 1.7E-48 T 29-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 CKQ55_RS30500 7069ef525232104f039b244b90638f7e 241 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 18 239 1.9E-69 T 29-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CKQ55_RS30500 7069ef525232104f039b244b90638f7e 241 Pfam PF05857 TraX protein 25 239 7.5E-49 T 29-03-2018 IPR008875 TraX CKQ55_RS04480 c621933a95760c40d0b0f18695700ed7 399 Gene3D G3DSA:2.60.40.10 1 144 2.0E-41 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS04480 c621933a95760c40d0b0f18695700ed7 399 Gene3D G3DSA:3.40.50.1820 147 399 1.1E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04480 c621933a95760c40d0b0f18695700ed7 399 Pfam PF11806 Domain of unknown function (DUF3327) 26 157 1.5E-42 T 29-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 CKQ55_RS04480 c621933a95760c40d0b0f18695700ed7 399 SUPERFAMILY SSF53474 157 393 2.92E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS04480 c621933a95760c40d0b0f18695700ed7 399 SUPERFAMILY SSF81296 3 152 1.54E-43 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS04480 c621933a95760c40d0b0f18695700ed7 399 Pfam PF00756 Putative esterase 174 390 1.1E-38 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CKQ55_RS02485 d5f833461aaad1dbfd7c321c755fe2d6 138 Gene3D G3DSA:1.10.443.10 2 137 3.7E-10 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS02485 d5f833461aaad1dbfd7c321c755fe2d6 138 SUPERFAMILY SSF56349 22 124 5.0E-9 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS18015 2ece3c4a198404b85f05f0fd825dc52c 445 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 429 2.2E-112 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CKQ55_RS18015 2ece3c4a198404b85f05f0fd825dc52c 445 PIRSF PIRSF006351 1 443 1.7E-136 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CKQ55_RS18015 2ece3c4a198404b85f05f0fd825dc52c 445 Pfam PF02378 Phosphotransferase system, EIIC 29 360 7.2E-46 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CKQ55_RS15885 c2648a573930c3d4615a5bacb07eab2e 217 PIRSF PIRSF006320 1 216 1.1E-103 T 29-03-2018 IPR026041 Glyoxalase ElbB CKQ55_RS15885 c2648a573930c3d4615a5bacb07eab2e 217 Gene3D G3DSA:3.40.50.880 2 217 1.8E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS15885 c2648a573930c3d4615a5bacb07eab2e 217 SUPERFAMILY SSF52317 1 214 3.17E-63 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CKQ55_RS01790 a811a3928b72a885ee96689acf3d6df8 542 Gene3D G3DSA:3.90.76.10 56 176 5.2E-37 T 29-03-2018 CKQ55_RS01790 a811a3928b72a885ee96689acf3d6df8 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 461 1.4E-91 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS01790 a811a3928b72a885ee96689acf3d6df8 542 Gene3D G3DSA:3.10.105.10 312 512 3.9E-56 T 29-03-2018 CKQ55_RS01790 a811a3928b72a885ee96689acf3d6df8 542 SUPERFAMILY SSF53850 35 539 1.45E-146 T 29-03-2018 CKQ55_RS01790 a811a3928b72a885ee96689acf3d6df8 542 PIRSF PIRSF002741 2 542 1.3E-115 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS01790 a811a3928b72a885ee96689acf3d6df8 542 Gene3D G3DSA:3.40.190.10 177 311 2.2E-44 T 29-03-2018 CKQ55_RS05025 8d498585ae41582f95425e686a654acb 130 Gene3D G3DSA:1.10.287.700 65 130 2.4E-7 T 29-03-2018 CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 Pfam PF00582 Universal stress protein family 1 143 5.0E-24 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 SUPERFAMILY SSF52402 2 143 2.01E-28 T 29-03-2018 CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 Gene3D G3DSA:3.40.50.620 2 143 1.4E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 PIRSF PIRSF006276 1 143 3.7E-17 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 PRINTS PR01438 Universal stress protein signature 2 20 2.0E-12 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 PRINTS PR01438 Universal stress protein signature 104 116 2.0E-12 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS23305 62ab9b09c0f92b84273ad89c7375f497 143 PRINTS PR01438 Universal stress protein signature 121 143 2.0E-12 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS03685 966e8e0352f089c7f7a4ee1143d7209d 143 SUPERFAMILY SSF53850 2 136 3.44E-18 T 29-03-2018 CKQ55_RS03685 966e8e0352f089c7f7a4ee1143d7209d 143 Gene3D G3DSA:3.40.190.10 7 109 1.5E-16 T 29-03-2018 CKQ55_RS03685 966e8e0352f089c7f7a4ee1143d7209d 143 Pfam PF03466 LysR substrate binding domain 2 136 1.0E-17 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS14010 dc2b17c2ff7a4fd10869fe380cac3db3 393 Gene3D G3DSA:1.10.3470.10 50 389 1.6E-25 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS14010 dc2b17c2ff7a4fd10869fe380cac3db3 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 383 1.7E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 SUPERFAMILY SSF53335 4 275 1.91E-60 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 45.852 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 Gene3D G3DSA:3.40.50.150 85 276 6.8E-49 T 29-03-2018 CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 1.4E-90 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 275 5.4E-94 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 Pfam PF13847 Methyltransferase domain 108 245 2.2E-21 T 29-03-2018 IPR025714 Methyltransferase domain CKQ55_RS24430 d8afbb8f968dfe7494ada30a05fae91b 279 Gene3D G3DSA:1.10.8.10 1 84 1.1E-22 T 29-03-2018 CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 Pfam PF00155 Aminotransferase class I and II 159 407 1.4E-16 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 Gene3D G3DSA:3.90.1150.10 380 486 4.2E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 Gene3D G3DSA:1.10.10.10 9 85 6.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 Gene3D G3DSA:3.40.640.10 166 379 2.9E-38 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 SMART SM00345 24 83 1.6E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 1.3E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 SUPERFAMILY SSF46785 15 87 9.37E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS11870 374858bc33dc270c18e2cc51f08b3e80 486 SUPERFAMILY SSF53383 114 485 3.06E-81 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS01025 853194c0188061057aa88c1833aa9d93 262 Pfam PF06629 MltA-interacting protein MipA 36 262 2.9E-39 T 29-03-2018 IPR010583 MltA-interacting MipA CKQ55_RS09185 78d46731fdffe4f15c684df795a70291 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 9.9E-80 T 29-03-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CKQ55_RS25630 8b0f5211aaa107d4cd39986a9f354c4d 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 187 4.3E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS25630 8b0f5211aaa107d4cd39986a9f354c4d 199 Gene3D G3DSA:1.10.357.10 62 195 1.0E-23 T 29-03-2018 CKQ55_RS25630 8b0f5211aaa107d4cd39986a9f354c4d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 1.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS25630 8b0f5211aaa107d4cd39986a9f354c4d 199 Gene3D G3DSA:1.10.10.60 8 61 8.1E-14 T 29-03-2018 CKQ55_RS25630 8b0f5211aaa107d4cd39986a9f354c4d 199 SUPERFAMILY SSF46689 8 76 7.18E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS25630 8b0f5211aaa107d4cd39986a9f354c4d 199 SUPERFAMILY SSF48498 81 194 1.11E-22 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS19645 9121c4351b76896c766adcbb0c2a2984 182 Pfam PF10554 Ash protein family 22 130 1.8E-25 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein CKQ55_RS15225 fe1f99c68ee29e4319131a5f9e8bf284 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 4.2E-32 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CKQ55_RS15225 fe1f99c68ee29e4319131a5f9e8bf284 66 Gene3D G3DSA:2.20.25.10 10 51 4.4E-4 T 29-03-2018 CKQ55_RS15225 fe1f99c68ee29e4319131a5f9e8bf284 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 58 6.9E-19 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CKQ55_RS22285 a6d15cdbe036aa25a1e23c12d53073c7 352 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 9 341 6.7E-86 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CKQ55_RS22285 a6d15cdbe036aa25a1e23c12d53073c7 352 Pfam PF05125 Phage major capsid protein, P2 family 8 340 2.9E-142 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 Gene3D G3DSA:1.20.1180.10 197 262 3.4E-26 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 Gene3D G3DSA:2.160.10.10 1 196 7.0E-45 T 29-03-2018 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 PIRSF PIRSF000456 4 262 1.8E-108 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.175 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 4.9E-113 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 SUPERFAMILY SSF51161 2 262 1.04E-81 T 29-03-2018 IPR011004 Trimeric LpxA-like CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.1E-31 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 45 4.4E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.9E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CKQ55_RS07550 c80a469f2d5d92fbd50978c46aa8e927 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CKQ55_RS11845 af69ec5d35a948af6181177cc878ce35 238 SUPERFAMILY SSF56784 10 238 5.38E-38 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11845 af69ec5d35a948af6181177cc878ce35 238 Gene3D G3DSA:3.40.50.1000 1 238 7.1E-22 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11845 af69ec5d35a948af6181177cc878ce35 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 1.3E-12 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS11845 af69ec5d35a948af6181177cc878ce35 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 201 1.4E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS25975 446828f3814bdc56c952f72854f67660 218 SUPERFAMILY SSF100950 5 213 6.77E-62 T 29-03-2018 CKQ55_RS25975 446828f3814bdc56c952f72854f67660 218 Gene3D G3DSA:3.40.1080.10 4 214 1.8E-54 T 29-03-2018 CKQ55_RS25975 446828f3814bdc56c952f72854f67660 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 210 2.6E-90 T 29-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CKQ55_RS25975 446828f3814bdc56c952f72854f67660 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 29-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS25975 446828f3814bdc56c952f72854f67660 218 Pfam PF01144 Coenzyme A transferase 7 200 2.8E-38 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS25975 446828f3814bdc56c952f72854f67660 218 SMART SM00882 7 204 8.7E-66 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 SMART SM00448 1 112 1.3E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 Pfam PF00072 Response regulator receiver domain 3 112 1.7E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 SUPERFAMILY SSF52172 1 174 3.27E-39 T 29-03-2018 IPR011006 CheY-like superfamily CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 SMART SM00862 145 220 1.3E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 Gene3D G3DSA:1.10.10.10 119 224 1.2E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 Gene3D G3DSA:3.40.50.2300 1 118 6.9E-34 T 29-03-2018 CKQ55_RS00535 416a04dfc849b90c2153541d4c5e3f1c 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 3.1E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS27900 13d17c18952c71cf1c446f4f64b91170 486 PIRSF PIRSF006060 19 486 3.4E-66 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS27900 13d17c18952c71cf1c446f4f64b91170 486 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS27900 13d17c18952c71cf1c446f4f64b91170 486 Pfam PF00324 Amino acid permease 35 475 4.0E-127 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS11960 bc0aeaba39e94d01977c3bffacf3ee48 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.661 T 29-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 CKQ55_RS11960 bc0aeaba39e94d01977c3bffacf3ee48 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 7.8E-11 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CKQ55_RS06975 a311d26638a95ceb7c15965442946ea7 483 Gene3D G3DSA:2.160.20.80 34 309 3.7E-5 T 29-03-2018 CKQ55_RS26895 6b5c9498a86cb0a13ba6df375ebd1811 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.2E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS26895 6b5c9498a86cb0a13ba6df375ebd1811 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 2.2E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS26895 6b5c9498a86cb0a13ba6df375ebd1811 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 2.2E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS26895 6b5c9498a86cb0a13ba6df375ebd1811 278 Pfam PF00561 alpha/beta hydrolase fold 24 258 5.1E-28 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS26895 6b5c9498a86cb0a13ba6df375ebd1811 278 Gene3D G3DSA:3.40.50.1820 1 278 1.7E-72 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS26895 6b5c9498a86cb0a13ba6df375ebd1811 278 SUPERFAMILY SSF53474 2 277 6.64E-65 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS17270 c6f29d293473dd04a93942509ada2d85 255 Pfam PF04402 Protein of unknown function (DUF541) 30 230 9.0E-46 T 29-03-2018 IPR007497 Protein of unknown function DUF541 CKQ55_RS27785 a79c8da4e4f041664de061aee39922b6 233 SUPERFAMILY SSF52540 7 225 6.19E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27785 a79c8da4e4f041664de061aee39922b6 233 Gene3D G3DSA:3.40.50.300 3 227 3.9E-66 T 29-03-2018 CKQ55_RS27785 a79c8da4e4f041664de061aee39922b6 233 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27785 a79c8da4e4f041664de061aee39922b6 233 Pfam PF00005 ABC transporter 22 168 8.2E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27785 a79c8da4e4f041664de061aee39922b6 233 SMART SM00382 31 218 2.0E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS03100 a6978f5bd1052a35527065a9e3897cbc 525 SUPERFAMILY SSF53649 219 486 3.14E-15 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS03100 a6978f5bd1052a35527065a9e3897cbc 525 Gene3D G3DSA:3.40.720.10 208 488 1.8E-17 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS03100 a6978f5bd1052a35527065a9e3897cbc 525 Pfam PF00884 Sulfatase 218 482 5.4E-39 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CKQ55_RS23465 8a6f56a28c7df596bc5d97bd156e9756 250 Pfam PF00005 ABC transporter 19 173 1.7E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS23465 8a6f56a28c7df596bc5d97bd156e9756 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS23465 8a6f56a28c7df596bc5d97bd156e9756 250 PIRSF PIRSF039085 1 249 2.6E-111 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CKQ55_RS23465 8a6f56a28c7df596bc5d97bd156e9756 250 Gene3D G3DSA:3.40.50.300 1 248 5.0E-79 T 29-03-2018 CKQ55_RS23465 8a6f56a28c7df596bc5d97bd156e9756 250 SUPERFAMILY SSF52540 4 243 1.77E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS23465 8a6f56a28c7df596bc5d97bd156e9756 250 SMART SM00382 28 221 9.4E-21 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS00950 8ac90067f627e3531c13df8ec4f7d395 184 SMART SM00506 4 137 4.0E-52 T 29-03-2018 IPR002589 Macro domain CKQ55_RS00950 8ac90067f627e3531c13df8ec4f7d395 184 Pfam PF01661 Macro domain 21 137 3.2E-43 T 29-03-2018 IPR002589 Macro domain CKQ55_RS00950 8ac90067f627e3531c13df8ec4f7d395 184 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 50.002 T 29-03-2018 IPR024900 O-acetyl-ADP-ribose deacetylase CKQ55_RS00950 8ac90067f627e3531c13df8ec4f7d395 184 SUPERFAMILY SSF52949 7 171 4.04E-66 T 29-03-2018 CKQ55_RS00950 8ac90067f627e3531c13df8ec4f7d395 184 Gene3D G3DSA:3.40.220.10 2 183 1.1E-74 T 29-03-2018 CKQ55_RS11560 48e43a0e8f6ead1a329914d0295644dd 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.485 T 29-03-2018 IPR022973 Ribosomal protein L10 CKQ55_RS11560 48e43a0e8f6ead1a329914d0295644dd 165 Pfam PF00466 Ribosomal protein L10 5 101 4.1E-25 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CKQ55_RS11560 48e43a0e8f6ead1a329914d0295644dd 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 29-03-2018 CKQ55_RS11560 48e43a0e8f6ead1a329914d0295644dd 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS11560 48e43a0e8f6ead1a329914d0295644dd 165 SUPERFAMILY SSF160369 4 160 2.35E-47 T 29-03-2018 CKQ55_RS17235 d2576833dc7872516a9ecaeb63cc0164 192 Pfam PF12822 ECF transporter, substrate-specific component 10 173 3.9E-12 T 29-03-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 CKQ55_RS02440 382e996aa13086f7ed8e325f1a8dc3a6 127 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 115 5.8E-41 T 29-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CKQ55_RS02440 382e996aa13086f7ed8e325f1a8dc3a6 127 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 113 6.0E-33 T 29-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CKQ55_RS14085 97cd5297031eace29f2a072d417cfc96 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 230 1.7E-92 T 29-03-2018 IPR021413 Protein of unknown function DUF3053 CKQ55_RS23535 c226df75ecaf4a1c04ca50dedbd59e02 212 Gene3D G3DSA:3.40.1400.10 1 212 3.1E-56 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS23535 c226df75ecaf4a1c04ca50dedbd59e02 212 SUPERFAMILY SSF89623 1 160 5.36E-36 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS23535 c226df75ecaf4a1c04ca50dedbd59e02 212 Pfam PF02502 Ribose/Galactose Isomerase 3 136 2.0E-29 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CKQ55_RS23535 c226df75ecaf4a1c04ca50dedbd59e02 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 8.8E-24 T 29-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal CKQ55_RS10825 a05edc8f394b6994bcb48b8363b0aed5 144 Gene3D G3DSA:3.10.180.10 7 144 2.1E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS10825 a05edc8f394b6994bcb48b8363b0aed5 144 SUPERFAMILY SSF54593 2 139 1.59E-28 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS31720 95d8d84cc2ac11c53d6c409d110fc7c7 181 Pfam PF01526 Tn3 transposase DDE domain 1 155 4.6E-61 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CKQ55_RS16380 bb2f2137f0c45bb2f6583b9b279f29eb 470 Gene3D G3DSA:3.20.20.140 89 467 4.6E-156 T 29-03-2018 CKQ55_RS16380 bb2f2137f0c45bb2f6583b9b279f29eb 470 Gene3D G3DSA:3.20.20.140 3 88 1.4E-27 T 29-03-2018 CKQ55_RS16380 bb2f2137f0c45bb2f6583b9b279f29eb 470 Pfam PF02614 Glucuronate isomerase 1 465 3.1E-231 T 29-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CKQ55_RS16380 bb2f2137f0c45bb2f6583b9b279f29eb 470 SUPERFAMILY SSF51556 3 465 2.86E-183 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS16380 bb2f2137f0c45bb2f6583b9b279f29eb 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.389 T 29-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CKQ55_RS00485 385a6555f9a66b0bf3fdb6b9e595cafa 78 Pfam PF07825 Excisionase-like protein 5 75 5.8E-8 T 29-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CKQ55_RS00485 385a6555f9a66b0bf3fdb6b9e595cafa 78 SUPERFAMILY SSF46955 4 77 2.2E-18 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS00485 385a6555f9a66b0bf3fdb6b9e595cafa 78 Gene3D G3DSA:1.10.1660.20 5 76 2.5E-22 T 29-03-2018 CKQ55_RS00115 385a6555f9a66b0bf3fdb6b9e595cafa 78 Pfam PF07825 Excisionase-like protein 5 75 5.8E-8 T 29-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CKQ55_RS00115 385a6555f9a66b0bf3fdb6b9e595cafa 78 SUPERFAMILY SSF46955 4 77 2.2E-18 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS00115 385a6555f9a66b0bf3fdb6b9e595cafa 78 Gene3D G3DSA:1.10.1660.20 5 76 2.5E-22 T 29-03-2018 CKQ55_RS30535 e4a3a207adadf2a7bb9651a25c2bb216 78 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 3 70 2.6E-15 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CKQ55_RS02615 56b05343209d03b279442e023326eb9d 301 Gene3D G3DSA:3.30.200.20 1 106 1.2E-5 T 29-03-2018 CKQ55_RS02615 56b05343209d03b279442e023326eb9d 301 SUPERFAMILY SSF56112 38 262 1.06E-31 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS02615 56b05343209d03b279442e023326eb9d 301 Gene3D G3DSA:3.90.1200.10 110 299 3.1E-16 T 29-03-2018 CKQ55_RS02615 56b05343209d03b279442e023326eb9d 301 Pfam PF01636 Phosphotransferase enzyme family 41 263 1.9E-25 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CKQ55_RS04780 eb771a3363fc26c1c4de9cc3f4111b6a 217 Gene3D G3DSA:3.40.109.10 1 217 4.0E-36 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS04780 eb771a3363fc26c1c4de9cc3f4111b6a 217 SUPERFAMILY SSF55469 1 216 7.98E-62 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CKQ55_RS04780 eb771a3363fc26c1c4de9cc3f4111b6a 217 Pfam PF00881 Nitroreductase family 8 193 3.8E-30 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CKQ55_RS06670 69cadc988bfad7dada79607144fb26f2 255 Gene3D G3DSA:3.40.50.300 1 232 4.3E-60 T 29-03-2018 CKQ55_RS06670 69cadc988bfad7dada79607144fb26f2 255 SUPERFAMILY SSF52540 1 211 1.39E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS06670 69cadc988bfad7dada79607144fb26f2 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06670 69cadc988bfad7dada79607144fb26f2 255 SMART SM00382 26 205 5.3E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06670 69cadc988bfad7dada79607144fb26f2 255 Pfam PF00005 ABC transporter 17 156 3.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 4.2E-27 T 29-03-2018 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.9E-46 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CKQ55_RS15580 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 3.9E-90 T 29-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 Gene3D G3DSA:3.40.30.10 1 95 1.2E-25 T 29-03-2018 CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 1.6E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 SUPERFAMILY SSF47616 82 211 6.54E-32 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 Pfam PF14497 Glutathione S-transferase, C-terminal domain 115 199 5.0E-8 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 SUPERFAMILY SSF52833 1 90 2.82E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS21840 bb8820c24577caa0e48cb4e933369e90 214 Gene3D G3DSA:1.20.1050.10 96 213 6.7E-27 T 29-03-2018 CKQ55_RS29290 8e825ea94711cc64f9709588b3c68cb2 353 Pfam PF05128 Domain of unknown function (DUF697) 183 341 1.3E-53 T 29-03-2018 IPR021147 Protein of unknown function DUF697 CKQ55_RS29290 8e825ea94711cc64f9709588b3c68cb2 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 2.4E-144 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 CKQ55_RS29290 8e825ea94711cc64f9709588b3c68cb2 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 38.964 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 CKQ55_RS23905 2ff6e3b9bfd10cf246b8ca8cb54223af 96 Pfam PF13974 YebO-like protein 17 96 3.2E-33 T 29-03-2018 IPR025594 YebO-like protein CKQ55_RS22415 2beb2108bf2de6949e8fa7d9184a8215 453 Gene3D G3DSA:3.20.20.70 8 170 0.0013 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS22415 2beb2108bf2de6949e8fa7d9184a8215 453 Pfam PF01136 Peptidase family U32 75 343 1.1E-95 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS22415 2beb2108bf2de6949e8fa7d9184a8215 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS22415 2beb2108bf2de6949e8fa7d9184a8215 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.7E-21 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal CKQ55_RS02625 38d9e4b6e4429043cb49e5bb5debcca6 194 Gene3D G3DSA:1.10.357.10 1 194 3.1E-29 T 29-03-2018 CKQ55_RS02625 38d9e4b6e4429043cb49e5bb5debcca6 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.2E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS02625 38d9e4b6e4429043cb49e5bb5debcca6 194 SUPERFAMILY SSF46689 3 77 3.75E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS13105 68795a58086956e205351da7239787af 229 SMART SM00895 97 220 3.5E-17 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS13105 68795a58086956e205351da7239787af 229 SMART SM00345 9 68 2.6E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13105 68795a58086956e205351da7239787af 229 Gene3D G3DSA:1.20.120.530 83 229 1.3E-27 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS13105 68795a58086956e205351da7239787af 229 SUPERFAMILY SSF46785 4 72 4.61E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13105 68795a58086956e205351da7239787af 229 Pfam PF07729 FCD domain 99 218 3.2E-25 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS13105 68795a58086956e205351da7239787af 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 6.6E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS13105 68795a58086956e205351da7239787af 229 Gene3D G3DSA:1.10.10.10 2 70 7.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS13105 68795a58086956e205351da7239787af 229 SUPERFAMILY SSF48008 98 227 1.33E-24 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS05990 9895a63443e207de32e627bc59ab7ad8 232 SUPERFAMILY SSF55729 27 198 9.23E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS05990 9895a63443e207de32e627bc59ab7ad8 232 Gene3D G3DSA:3.40.630.30 16 206 2.8E-29 T 29-03-2018 CKQ55_RS05990 9895a63443e207de32e627bc59ab7ad8 232 Pfam PF13302 Acetyltransferase (GNAT) domain 35 174 2.2E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS29825 ad99acc922925e909d796c2634fb84d7 452 Gene3D G3DSA:1.20.1250.20 245 451 5.9E-23 T 29-03-2018 CKQ55_RS29825 ad99acc922925e909d796c2634fb84d7 452 Gene3D G3DSA:1.20.1250.20 13 215 1.2E-29 T 29-03-2018 CKQ55_RS29825 ad99acc922925e909d796c2634fb84d7 452 SUPERFAMILY SSF103473 7 448 5.36E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS29825 ad99acc922925e909d796c2634fb84d7 452 Pfam PF00083 Sugar (and other) transporter 55 450 3.9E-38 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS11500 aef4f0387ac54c984fc4ae22e2e4b66a 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 2.3E-57 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS11500 aef4f0387ac54c984fc4ae22e2e4b66a 211 Gene3D G3DSA:3.20.20.70 12 206 1.5E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS11500 aef4f0387ac54c984fc4ae22e2e4b66a 211 Pfam PF02581 Thiamine monophosphate synthase 21 189 1.2E-55 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS11500 aef4f0387ac54c984fc4ae22e2e4b66a 211 SUPERFAMILY SSF51391 6 205 5.36E-65 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS11500 aef4f0387ac54c984fc4ae22e2e4b66a 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.825 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CKQ55_RS14715 66993a3aa0874cac35f6ab953c7859aa 221 Pfam PF02592 Putative vitamin uptake transporter 43 198 1.5E-36 T 29-03-2018 IPR003744 Queuosine precursor transporter CKQ55_RS14715 66993a3aa0874cac35f6ab953c7859aa 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 4.8E-66 T 29-03-2018 IPR003744 Queuosine precursor transporter CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.3E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 2.7E-54 T 29-03-2018 CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 SUPERFAMILY SSF51735 8 252 6.24E-72 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 6.0E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.0E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.0E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.0E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.0E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 6.0E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 Gene3D G3DSA:3.40.50.720 42 253 1.7E-56 T 29-03-2018 CKQ55_RS26800 d459a4966dc5004df90081da8228ffb9 253 Gene3D G3DSA:3.40.50.720 1 41 3.9E-7 T 29-03-2018 CKQ55_RS29425 7113f1d2f3f354fcdf76729fe50a047a 255 SUPERFAMILY SSF48317 13 113 6.02E-31 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29425 7113f1d2f3f354fcdf76729fe50a047a 255 SUPERFAMILY SSF48317 145 233 6.02E-31 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29425 7113f1d2f3f354fcdf76729fe50a047a 255 Gene3D G3DSA:1.20.144.10 7 250 2.1E-25 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29425 7113f1d2f3f354fcdf76729fe50a047a 255 Pfam PF01569 PAP2 superfamily 79 232 2.1E-31 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS29425 7113f1d2f3f354fcdf76729fe50a047a 255 SMART SM00014 76 227 1.4E-32 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS01045 198075232b1d5f9dd6ddd02ec7c70b31 375 Pfam PF09375 Imelysin 135 367 2.0E-43 T 29-03-2018 IPR018976 Peptidase M75, Imelysin CKQ55_RS01045 198075232b1d5f9dd6ddd02ec7c70b31 375 Pfam PF13473 Cupredoxin-like domain 13 115 1.6E-24 T 29-03-2018 IPR028096 EfeO-type cupredoxin-like domain CKQ55_RS01045 198075232b1d5f9dd6ddd02ec7c70b31 375 Gene3D G3DSA:3.90.20.10 155 370 4.3E-4 T 29-03-2018 CKQ55_RS01045 198075232b1d5f9dd6ddd02ec7c70b31 375 SUPERFAMILY SSF49503 16 115 2.21E-5 T 29-03-2018 IPR008972 Cupredoxin CKQ55_RS14650 27b8a73471892e8fb513f4553ec8b136 563 Gene3D G3DSA:3.90.550.10 8 260 5.4E-23 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14650 27b8a73471892e8fb513f4553ec8b136 563 SUPERFAMILY SSF53448 8 239 1.56E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS14650 27b8a73471892e8fb513f4553ec8b136 563 Pfam PF00535 Glycosyl transferase family 2 8 127 4.8E-18 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS08505 771128674e2de57de692f61f333f199f 419 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 5 414 6.0E-62 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS08505 771128674e2de57de692f61f333f199f 419 Pfam PF03600 Citrate transporter 15 343 1.6E-42 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CKQ55_RS14905 6ab2ca39a2981e0c445b8b1d5a844edc 231 Gene3D G3DSA:2.60.120.10 132 231 1.3E-24 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS14905 6ab2ca39a2981e0c445b8b1d5a844edc 231 PIRSF PIRSF006232 1 230 6.4E-58 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CKQ55_RS14905 6ab2ca39a2981e0c445b8b1d5a844edc 231 Gene3D G3DSA:2.60.120.10 11 131 5.6E-49 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS14905 6ab2ca39a2981e0c445b8b1d5a844edc 231 Pfam PF02678 Pirin 7 119 7.4E-38 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CKQ55_RS14905 6ab2ca39a2981e0c445b8b1d5a844edc 231 SUPERFAMILY SSF51182 1 231 5.86E-80 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS20460 25b0c51b771da69acb93e125a651fb8c 111 PIRSF PIRSF012296 1 111 2.7E-56 T 29-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 CKQ55_RS20460 25b0c51b771da69acb93e125a651fb8c 111 SMART SM00877 39 111 7.4E-13 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20460 25b0c51b771da69acb93e125a651fb8c 111 SUPERFAMILY SSF143414 39 106 1.44E-12 T 29-03-2018 CKQ55_RS20460 25b0c51b771da69acb93e125a651fb8c 111 Pfam PF00936 BMC domain 40 103 1.3E-11 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09630 d3f90fec98856cdb83dd5a075f7cc782 237 SMART SM00052 1 223 1.2E-7 T 29-03-2018 IPR001633 EAL domain CKQ55_RS09630 d3f90fec98856cdb83dd5a075f7cc782 237 Gene3D G3DSA:3.20.20.450 9 227 7.4E-26 T 29-03-2018 IPR001633 EAL domain CKQ55_RS09630 d3f90fec98856cdb83dd5a075f7cc782 237 Pfam PF00563 EAL domain 11 216 2.5E-22 T 29-03-2018 IPR001633 EAL domain CKQ55_RS09630 d3f90fec98856cdb83dd5a075f7cc782 237 SUPERFAMILY SSF141868 11 216 1.26E-25 T 29-03-2018 IPR001633 EAL domain CKQ55_RS18170 8be99a6ac21b879be40dc16057a09c92 288 SUPERFAMILY SSF54211 3 139 5.24E-20 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CKQ55_RS18170 8be99a6ac21b879be40dc16057a09c92 288 Gene3D G3DSA:3.30.230.10 20 142 2.9E-14 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CKQ55_RS18170 8be99a6ac21b879be40dc16057a09c92 288 Pfam PF00288 GHMP kinases N terminal domain 73 120 4.2E-8 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CKQ55_RS18170 8be99a6ac21b879be40dc16057a09c92 288 PIRSF PIRSF033887 1 269 1.6E-66 T 29-03-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 CKQ55_RS24965 e50d65262fd207bf425bfe599236fae4 70 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 3.4E-32 T 29-03-2018 IPR024493 Fumarase D CKQ55_RS24965 e50d65262fd207bf425bfe599236fae4 70 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 67 4.0E-24 T 29-03-2018 CKQ55_RS01055 1679b4618771624fc9730c3004c84bf8 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 2.0E-56 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CKQ55_RS01055 1679b4618771624fc9730c3004c84bf8 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.6E-19 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 Pfam PF00106 short chain dehydrogenase 8 194 6.8E-57 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 Gene3D G3DSA:3.40.50.720 1 241 2.4E-56 T 29-03-2018 CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 SUPERFAMILY SSF51735 1 234 8.54E-65 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.5E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.5E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS22130 a9a78fbbc420db780f6586aa229296ec 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.331 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 PIRSF PIRSF000190 1 218 8.9E-84 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 4.9E-100 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 2.7E-23 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 SUPERFAMILY SSF50475 21 218 1.07E-66 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 1.5E-18 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS25690 84c1e1bdf5a25e7ec855c56535c09003 218 Gene3D G3DSA:2.30.110.10 17 218 4.2E-69 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS03140 e793f728e386c515554d5be1bd5c2382 736 Pfam PF00924 Mechanosensitive ion channel 512 711 1.3E-41 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CKQ55_RS03140 e793f728e386c515554d5be1bd5c2382 736 SUPERFAMILY SSF82861 473 553 3.53E-12 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CKQ55_RS03140 e793f728e386c515554d5be1bd5c2382 736 SUPERFAMILY SSF50182 555 613 8.17E-10 T 29-03-2018 IPR010920 LSM domain CKQ55_RS03140 e793f728e386c515554d5be1bd5c2382 736 Gene3D G3DSA:2.30.30.60 572 619 5.0E-6 T 29-03-2018 CKQ55_RS03140 e793f728e386c515554d5be1bd5c2382 736 SUPERFAMILY SSF82689 624 719 4.32E-9 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CKQ55_RS03140 e793f728e386c515554d5be1bd5c2382 736 Gene3D G3DSA:3.30.70.100 620 717 1.3E-6 T 29-03-2018 CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 SUPERFAMILY SSF54862 18 112 1.42E-22 T 29-03-2018 CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.4E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 Gene3D G3DSA:3.30.70.20 7 45 1.7E-7 T 29-03-2018 CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 Gene3D G3DSA:3.30.70.20 46 80 1.0E-16 T 29-03-2018 CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 Gene3D G3DSA:3.30.70.20 81 165 8.2E-7 T 29-03-2018 CKQ55_RS19110 c1aa74b70f652b95d208a7808b2a627d 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS28490 7c0d22dc9e8241925d126a6d3e5ea22d 307 SUPERFAMILY SSF111369 44 186 3.27E-19 T 29-03-2018 CKQ55_RS28490 7c0d22dc9e8241925d126a6d3e5ea22d 307 Gene3D G3DSA:1.20.1600.10 32 266 2.6E-17 T 29-03-2018 CKQ55_RS28490 7c0d22dc9e8241925d126a6d3e5ea22d 307 Pfam PF13533 Biotin-lipoyl like 47 94 1.4E-14 T 29-03-2018 CKQ55_RS28490 7c0d22dc9e8241925d126a6d3e5ea22d 307 Pfam PF13437 HlyD family secretion protein 155 237 3.4E-7 T 29-03-2018 CKQ55_RS22195 5de2ba80f8d1b166eb940742eeab2f8a 266 SUPERFAMILY SSF46894 17 104 2.18E-9 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS22195 5de2ba80f8d1b166eb940742eeab2f8a 266 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 103 5.0E-8 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS22195 5de2ba80f8d1b166eb940742eeab2f8a 266 Gene3D G3DSA:1.10.10.10 11 112 1.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS22195 5de2ba80f8d1b166eb940742eeab2f8a 266 SMART SM00862 27 104 1.3E-7 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS22290 7188d41a049494219ee89e9bdbd8f224 247 Gene3D G3DSA:1.25.40.10 13 246 5.2E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS22290 7188d41a049494219ee89e9bdbd8f224 247 Pfam PF05944 Phage small terminase subunit 35 164 2.7E-39 T 29-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 Gene3D G3DSA:1.10.10.10 1 143 2.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 SMART SM00347 25 126 5.3E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 Pfam PF12802 MarR family 30 89 3.2E-12 T 29-03-2018 CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 SUPERFAMILY SSF46785 4 140 3.85E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.2E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.2E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.2E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS28245 068bc837a9d861e8e4bd2c5c45118565 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.2E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS17820 754c1a2658fa0290118f61e70afdc042 69 SUPERFAMILY SSF159871 3 67 2.62E-10 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS17820 754c1a2658fa0290118f61e70afdc042 69 Pfam PF07338 Protein of unknown function (DUF1471) 25 67 8.3E-7 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS17820 754c1a2658fa0290118f61e70afdc042 69 Gene3D G3DSA:3.30.1660.10 3 69 1.1E-13 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS27555 7fdd4c15e7f5cf06987894f5e9a168cb 205 PIRSF PIRSF006324 2 205 5.8E-42 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS27555 7fdd4c15e7f5cf06987894f5e9a168cb 205 Pfam PF01810 LysE type translocator 14 203 3.5E-32 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS27870 035dead4c6bda336505c5249125f669a 169 Pfam PF00583 Acetyltransferase (GNAT) family 32 132 2.6E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS27870 035dead4c6bda336505c5249125f669a 169 Gene3D G3DSA:3.40.630.30 7 163 3.4E-21 T 29-03-2018 CKQ55_RS27870 035dead4c6bda336505c5249125f669a 169 SUPERFAMILY SSF55729 1 135 3.11E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 Gene3D G3DSA:3.30.420.40 3 249 2.2E-67 T 29-03-2018 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 SUPERFAMILY SSF53067 260 498 4.97E-59 T 29-03-2018 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 Gene3D G3DSA:3.30.420.40 250 501 1.2E-55 T 29-03-2018 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 SUPERFAMILY SSF53067 8 253 1.5E-73 T 29-03-2018 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 253 3.1E-60 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 454 8.7E-44 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS04515 817c6792842a7d2d996fe05fb8c2662d 506 PIRSF PIRSF000538 6 504 2.3E-126 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS25465 b87f20c41604df795e2510cb4453f246 268 Gene3D G3DSA:3.60.15.10 53 249 2.0E-16 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS25465 b87f20c41604df795e2510cb4453f246 268 SUPERFAMILY SSF56281 52 237 8.4E-33 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS25465 b87f20c41604df795e2510cb4453f246 268 SMART SM00849 72 234 1.2E-4 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS31150 554b7d09213ea24a152e5005438d7e04 617 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 322 568 7.7E-82 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CKQ55_RS31150 554b7d09213ea24a152e5005438d7e04 617 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 10 608 6.6E-165 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CKQ55_RS00845 f7e6ad6f5f51e04b0c1e9629c64c8791 307 SUPERFAMILY SSF51735 4 138 8.04E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS00845 f7e6ad6f5f51e04b0c1e9629c64c8791 307 Gene3D G3DSA:3.30.360.10 137 307 2.6E-20 T 29-03-2018 CKQ55_RS00845 f7e6ad6f5f51e04b0c1e9629c64c8791 307 Gene3D G3DSA:3.40.50.720 3 136 7.5E-34 T 29-03-2018 CKQ55_RS00845 f7e6ad6f5f51e04b0c1e9629c64c8791 307 SUPERFAMILY SSF55347 124 264 1.24E-44 T 29-03-2018 CKQ55_RS00845 f7e6ad6f5f51e04b0c1e9629c64c8791 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 122 2.8E-27 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CKQ55_RS29880 6ff836917c34155b52a33439b76e3c31 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 37.887 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS29880 6ff836917c34155b52a33439b76e3c31 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 135 1.3E-64 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS29880 6ff836917c34155b52a33439b76e3c31 137 Pfam PF01641 SelR domain 9 127 7.5E-54 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CKQ55_RS29880 6ff836917c34155b52a33439b76e3c31 137 SUPERFAMILY SSF51316 5 133 8.89E-59 T 29-03-2018 IPR011057 Mss4-like CKQ55_RS29880 6ff836917c34155b52a33439b76e3c31 137 Gene3D G3DSA:2.170.150.20 1 136 1.4E-58 T 29-03-2018 CKQ55_RS27000 3e41a51cbbc0ca3cc9b44b1bef80a4ee 340 Gene3D G3DSA:1.20.1630.10 10 294 1.4E-41 T 29-03-2018 CKQ55_RS27000 3e41a51cbbc0ca3cc9b44b1bef80a4ee 340 Pfam PF03916 Polysulphide reductase, NrfD 11 290 2.0E-41 T 29-03-2018 IPR005614 NrfD family CKQ55_RS16390 220e57768e9e723901ed8f59a27d75d1 184 PIRSF PIRSF011443 1 180 3.6E-74 T 29-03-2018 IPR026267 Inner membrane protein YgjV CKQ55_RS16390 220e57768e9e723901ed8f59a27d75d1 184 Pfam PF10688 Bacterial inner membrane protein 5 163 3.7E-57 T 29-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV CKQ55_RS15020 316ada8fe0a026b72b178d9c9756774f 186 Gene3D G3DSA:3.90.79.10 8 186 2.8E-33 T 29-03-2018 CKQ55_RS15020 316ada8fe0a026b72b178d9c9756774f 186 Pfam PF00293 NUDIX domain 47 155 4.6E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS15020 316ada8fe0a026b72b178d9c9756774f 186 SUPERFAMILY SSF55811 3 181 1.49E-37 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS15020 316ada8fe0a026b72b178d9c9756774f 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS20270 4d1ecc0cbf5c0983b42d84ce38b267fa 398 SUPERFAMILY SSF103473 18 389 5.1E-31 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS20270 4d1ecc0cbf5c0983b42d84ce38b267fa 398 Gene3D G3DSA:1.20.1250.20 12 193 1.9E-14 T 29-03-2018 CKQ55_RS20270 4d1ecc0cbf5c0983b42d84ce38b267fa 398 Gene3D G3DSA:1.20.1250.20 200 388 7.7E-8 T 29-03-2018 CKQ55_RS20270 4d1ecc0cbf5c0983b42d84ce38b267fa 398 Pfam PF07690 Major Facilitator Superfamily 27 312 7.0E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS22255 6659daf6c63ff0ee20798084381d283b 346 Gene3D G3DSA:1.10.3290.10 127 345 5.4E-28 T 29-03-2018 IPR003812 Fido domain CKQ55_RS22255 6659daf6c63ff0ee20798084381d283b 346 Pfam PF02661 Fic/DOC family 197 296 4.4E-17 T 29-03-2018 IPR003812 Fido domain CKQ55_RS22255 6659daf6c63ff0ee20798084381d283b 346 SUPERFAMILY SSF140931 176 345 3.4E-29 T 29-03-2018 IPR003812 Fido domain CKQ55_RS03650 ff430938a3e37ec0ee91282c3cfe135c 105 Pfam PF14330 Domain of unknown function (DUF4387) 5 102 3.2E-39 T 29-03-2018 IPR025496 Protein of unknown function DUF4387 CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 Gene3D G3DSA:3.40.50.300 1 357 8.6E-32 T 29-03-2018 CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 97.164 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.0E-137 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 SUPERFAMILY SSF52540 1 342 2.27E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13080 0d6a32b60e8211aaec444d420e9d656b 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 5.0E-42 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CKQ55_RS16830 83b7d08edbac4a73f6435973e42f29a2 193 SUPERFAMILY SSF52218 1 192 2.99E-42 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS16830 83b7d08edbac4a73f6435973e42f29a2 193 Gene3D G3DSA:3.40.50.360 1 193 8.1E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS16830 83b7d08edbac4a73f6435973e42f29a2 193 Pfam PF02525 Flavodoxin-like fold 3 188 2.6E-36 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 176.661 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 SUPERFAMILY SSF56276 112 174 4.32E-23 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 SUPERFAMILY SSF56276 41 84 4.32E-23 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 7.6E-149 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 PIRSF PIRSF001356 1 263 4.8E-156 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 Gene3D G3DSA:3.60.90.10 32 189 1.6E-45 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CKQ55_RS07955 9c683b312cde812beff259b4b20bdf10 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.3E-30 T 29-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CKQ55_RS05020 b7d40b41684f0d5bd08d31c84504b102 160 Gene3D G3DSA:3.10.450.160 21 157 4.1E-19 T 29-03-2018 CKQ55_RS05020 b7d40b41684f0d5bd08d31c84504b102 160 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 76 149 1.0E-9 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CKQ55_RS05020 b7d40b41684f0d5bd08d31c84504b102 160 Pfam PF11776 Nickel/cobalt transporter regulator 101 151 9.9E-23 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CKQ55_RS04730 42c80c524edc8307d3951ba4e217b902 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 8.9E-46 T 29-03-2018 IPR010590 Protein of unknown function DUF1158 CKQ55_RS04730 42c80c524edc8307d3951ba4e217b902 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 36 80 2.0E-17 T 29-03-2018 IPR010590 Protein of unknown function DUF1158 CKQ55_RS22300 4adb9c4a9d1f7a347534bd8d6be6b8aa 67 Gene3D G3DSA:3.10.350.10 2 65 7.9E-5 T 29-03-2018 CKQ55_RS22300 4adb9c4a9d1f7a347534bd8d6be6b8aa 67 Pfam PF05489 Phage Tail Protein X 3 60 2.0E-28 T 29-03-2018 IPR008861 Phage Tail Protein X-like CKQ55_RS23710 67406afb6ee6146ee4a5799b965c5167 328 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 5.0E-145 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CKQ55_RS23710 67406afb6ee6146ee4a5799b965c5167 328 PIRSF PIRSF026649 9 314 1.7E-96 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CKQ55_RS23710 67406afb6ee6146ee4a5799b965c5167 328 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 52.579 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CKQ55_RS23710 67406afb6ee6146ee4a5799b965c5167 328 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 4.2E-102 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CKQ55_RS25500 a638ac9d55fc2eda4149af6b80886645 172 Gene3D G3DSA:3.90.950.20 5 170 2.5E-45 T 29-03-2018 CKQ55_RS25500 a638ac9d55fc2eda4149af6b80886645 172 Pfam PF02464 Competence-damaged protein 14 165 5.6E-49 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS25500 a638ac9d55fc2eda4149af6b80886645 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 19 166 7.2E-49 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS25500 a638ac9d55fc2eda4149af6b80886645 172 SUPERFAMILY SSF142433 13 166 4.84E-45 T 29-03-2018 IPR008136 CinA, C-terminal CKQ55_RS19360 34c86faa3a6df1b41ca5e516be51e423 354 Gene3D G3DSA:1.10.3720.10 108 336 2.0E-36 T 29-03-2018 CKQ55_RS19360 34c86faa3a6df1b41ca5e516be51e423 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 2.8E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS19360 34c86faa3a6df1b41ca5e516be51e423 354 SUPERFAMILY SSF161098 142 324 8.11E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS07480 e64a659439ba6adf9efaca8ca1f956cf 273 SUPERFAMILY SSF54001 64 160 1.54E-26 T 29-03-2018 CKQ55_RS07480 e64a659439ba6adf9efaca8ca1f956cf 273 SUPERFAMILY SSF54001 201 258 1.54E-26 T 29-03-2018 CKQ55_RS07480 e64a659439ba6adf9efaca8ca1f956cf 273 Gene3D G3DSA:3.90.1720.10 61 251 7.8E-27 T 29-03-2018 CKQ55_RS07480 e64a659439ba6adf9efaca8ca1f956cf 273 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 67 156 5.4E-10 T 29-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CKQ55_RS00995 8e4c51d50e08d1b2e1b08a2cf83102a6 225 Gene3D G3DSA:3.40.50.850 10 215 4.8E-40 T 29-03-2018 CKQ55_RS00995 8e4c51d50e08d1b2e1b08a2cf83102a6 225 SUPERFAMILY SSF52499 13 209 2.49E-47 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS00995 8e4c51d50e08d1b2e1b08a2cf83102a6 225 Pfam PF00857 Isochorismatase family 19 172 3.5E-21 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CKQ55_RS18660 8050ae1679f15726cf52d6d3eafa2f85 352 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 325 6.4E-124 T 29-03-2018 IPR010148 CRISPR-associated protein, CT1975 CKQ55_RS18660 8050ae1679f15726cf52d6d3eafa2f85 352 Pfam PF09344 CT1975-like protein 5 331 2.5E-98 T 29-03-2018 IPR010148 CRISPR-associated protein, CT1975 CKQ55_RS06740 e334f24e700024a5376bc6aef884518f 378 Gene3D G3DSA:3.40.50.2300 16 197 1.4E-31 T 29-03-2018 CKQ55_RS06740 e334f24e700024a5376bc6aef884518f 378 Pfam PF13458 Periplasmic binding protein 28 369 1.2E-48 T 29-03-2018 IPR028081 Leucine-binding protein domain CKQ55_RS06740 e334f24e700024a5376bc6aef884518f 378 SUPERFAMILY SSF53822 28 370 3.4E-74 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS06740 e334f24e700024a5376bc6aef884518f 378 Gene3D G3DSA:3.40.50.2300 198 362 1.9E-19 T 29-03-2018 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 Gene3D G3DSA:3.40.50.150 9 254 1.3E-83 T 29-03-2018 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 SUPERFAMILY SSF51905 266 474 8.42E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 SUPERFAMILY SSF51905 567 655 8.42E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 2.2E-49 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 Pfam PF01266 FAD dependent oxidoreductase 266 628 7.5E-51 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 653 28.357 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 658 1.6E-157 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 SUPERFAMILY SSF53335 149 214 4.48E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS20895 41a16cde6c0180c8c8b7c9d465664f1c 662 Gene3D G3DSA:3.50.50.60 255 662 3.7E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS09285 103d5dd74801b058808ae6adfed29322 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 5.4E-26 T 29-03-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CKQ55_RS09270 766fdba99858f6bd92f43f7978107e3f 303 SUPERFAMILY SSF141130 3 290 1.96E-85 T 29-03-2018 CKQ55_RS09270 766fdba99858f6bd92f43f7978107e3f 303 Gene3D G3DSA:2.60.120.580 121 211 1.5E-31 T 29-03-2018 CKQ55_RS09270 766fdba99858f6bd92f43f7978107e3f 303 Gene3D G3DSA:2.60.120.580 1 119 2.3E-24 T 29-03-2018 CKQ55_RS09270 766fdba99858f6bd92f43f7978107e3f 303 Pfam PF03069 Acetamidase/Formamidase family 147 220 5.1E-19 T 29-03-2018 IPR004304 Acetamidase/Formamidase GO:0016811 CKQ55_RS09270 766fdba99858f6bd92f43f7978107e3f 303 Pfam PF03069 Acetamidase/Formamidase family 15 141 1.1E-12 T 29-03-2018 IPR004304 Acetamidase/Formamidase GO:0016811 CKQ55_RS09270 766fdba99858f6bd92f43f7978107e3f 303 Gene3D G3DSA:3.10.28.20 214 292 7.7E-19 T 29-03-2018 CKQ55_RS31005 a1d52e292dfc63c30c221767e9b84b21 143 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 4 142 1.2E-67 T 29-03-2018 IPR009385 Plasmid SOS inhibition CKQ55_RS14260 aa2aa4c6346e5bf37f5efc736a7f62ee 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 60 5.0E-19 T 29-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CKQ55_RS14260 aa2aa4c6346e5bf37f5efc736a7f62ee 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 4.3E-23 T 29-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CKQ55_RS26095 05a9492d67586aac4f73a1065967b762 344 Pfam PF01594 AI-2E family transporter 14 328 3.3E-69 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CKQ55_RS10055 a144ea4fbf8740c1c5eb90722666b52b 34 Pfam PF08052 PyrBI operon leader peptide 1 33 2.1E-15 T 29-03-2018 IPR012602 PyrBI operon leader peptide GO:0019856 CKQ55_RS17550 07b78db1cf6d3d21a2016cce6d86cd29 329 Pfam PF00248 Aldo/keto reductase family 16 306 4.3E-73 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17550 07b78db1cf6d3d21a2016cce6d86cd29 329 SUPERFAMILY SSF51430 1 311 2.88E-100 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS17550 07b78db1cf6d3d21a2016cce6d86cd29 329 Gene3D G3DSA:3.20.20.100 1 327 5.1E-99 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CKQ55_RS31290 5dbc8c3de594f2a4035030965b5ec6de 193 Pfam PF11140 Protein of unknown function (DUF2913) 9 167 1.3E-23 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 CKQ55_RS22700 4771a7077e17b93f118276005c59fc37 246 Pfam PF00005 ABC transporter 47 177 2.9E-16 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS22700 4771a7077e17b93f118276005c59fc37 246 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS22700 4771a7077e17b93f118276005c59fc37 246 SUPERFAMILY SSF52540 42 239 1.26E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22700 4771a7077e17b93f118276005c59fc37 246 Gene3D G3DSA:3.40.50.300 1 245 1.6E-47 T 29-03-2018 CKQ55_RS22700 4771a7077e17b93f118276005c59fc37 246 SMART SM00382 55 244 5.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS10275 2b2b94d98d251ac0012fb07539b41f34 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.3E-24 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CKQ55_RS10275 2b2b94d98d251ac0012fb07539b41f34 114 Gene3D G3DSA:3.10.490.10 1 112 2.4E-29 T 29-03-2018 CKQ55_RS10275 2b2b94d98d251ac0012fb07539b41f34 114 SUPERFAMILY SSF110857 1 110 6.02E-34 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CKQ55_RS03850 348802a3e55d7380f3e465f438bd34e3 231 SUPERFAMILY SSF53639 2 223 1.67E-64 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS03850 348802a3e55d7380f3e465f438bd34e3 231 SMART SM01007 7 198 8.5E-60 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS03850 348802a3e55d7380f3e465f438bd34e3 231 Gene3D G3DSA:3.40.225.10 1 231 5.0E-55 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS03850 348802a3e55d7380f3e465f438bd34e3 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 196 6.3E-45 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CKQ55_RS03850 348802a3e55d7380f3e465f438bd34e3 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 4.0E-119 T 29-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CKQ55_RS20160 d184cf60e39e83e4b0b953816cff93a8 258 Pfam PF07179 SseB protein N-terminal domain 8 119 2.0E-26 T 29-03-2018 IPR009839 SseB protein N-terminal domain CKQ55_RS20160 d184cf60e39e83e4b0b953816cff93a8 258 Pfam PF14581 SseB protein C-terminal domain 137 243 1.8E-29 T 29-03-2018 IPR027945 SseB protein, C-terminal CKQ55_RS21430 fc4c7017998b89f7d04ad8dc9924beee 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 32 210 5.1E-54 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CKQ55_RS21430 fc4c7017998b89f7d04ad8dc9924beee 216 SUPERFAMILY SSF51197 15 211 3.85E-58 T 29-03-2018 CKQ55_RS21430 fc4c7017998b89f7d04ad8dc9924beee 216 Gene3D G3DSA:2.60.120.590 11 216 7.0E-49 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CKQ55_RS13200 b5962f8eadbe8cf64a344caa5697734c 394 SUPERFAMILY SSF103473 4 386 1.05E-54 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS13200 b5962f8eadbe8cf64a344caa5697734c 394 Gene3D G3DSA:1.20.1250.20 196 392 1.7E-6 T 29-03-2018 CKQ55_RS13200 b5962f8eadbe8cf64a344caa5697734c 394 Gene3D G3DSA:1.20.1250.20 1 195 2.8E-30 T 29-03-2018 CKQ55_RS13200 b5962f8eadbe8cf64a344caa5697734c 394 Pfam PF07690 Major Facilitator Superfamily 14 349 7.4E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS13200 b5962f8eadbe8cf64a344caa5697734c 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 51 186 4.8E-39 T 29-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 CKQ55_RS23315 9291f7d682e9c041055a2001989d56aa 309 Gene3D G3DSA:3.40.50.1820 41 302 1.0E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23315 9291f7d682e9c041055a2001989d56aa 309 SUPERFAMILY SSF53474 43 297 2.04E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23315 9291f7d682e9c041055a2001989d56aa 309 Pfam PF00756 Putative esterase 64 212 1.3E-9 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CKQ55_RS03195 e10f65e81a385b5a0d6cdb5f9920c154 281 Gene3D G3DSA:3.40.50.970 1 279 4.8E-60 T 29-03-2018 CKQ55_RS03195 e10f65e81a385b5a0d6cdb5f9920c154 281 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 267 4.3E-41 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CKQ55_RS03195 e10f65e81a385b5a0d6cdb5f9920c154 281 SUPERFAMILY SSF52518 7 278 9.4E-78 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CKQ55_RS08170 3ac62bf33de0ef43159a8bd7156dbf8b 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 6.6E-29 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CKQ55_RS08170 3ac62bf33de0ef43159a8bd7156dbf8b 121 Pfam PF04999 Cell division protein FtsL 25 119 1.1E-35 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CKQ55_RS08170 3ac62bf33de0ef43159a8bd7156dbf8b 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.764 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CKQ55_RS22190 1da9fa3e243828f136308dd4f1889c9c 257 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS22190 1da9fa3e243828f136308dd4f1889c9c 257 SUPERFAMILY SSF52540 1 232 1.81E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS22190 1da9fa3e243828f136308dd4f1889c9c 257 Gene3D G3DSA:3.40.50.300 1 256 6.7E-71 T 29-03-2018 CKQ55_RS22190 1da9fa3e243828f136308dd4f1889c9c 257 Pfam PF00005 ABC transporter 22 167 1.8E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS22190 1da9fa3e243828f136308dd4f1889c9c 257 SMART SM00382 30 216 8.0E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS28740 0c627381751e085990266509769faea7 104 Gene3D G3DSA:3.40.50.2300 3 103 8.2E-19 T 29-03-2018 CKQ55_RS28740 0c627381751e085990266509769faea7 104 SUPERFAMILY SSF52794 2 100 4.97E-20 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS28740 0c627381751e085990266509769faea7 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 93 1.8E-6 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS09675 0809664e2baf3744d446ae449a946648 157 Pfam PF13817 IS66 C-terminal element 113 150 2.6E-15 T 29-03-2018 CKQ55_RS09675 0809664e2baf3744d446ae449a946648 157 Pfam PF03050 Transposase IS66 family 2 106 2.5E-29 T 29-03-2018 IPR004291 Transposase, IS66 CKQ55_RS00665 df34f12d92091d2c5f397613c2fdb524 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 7.5E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS00665 df34f12d92091d2c5f397613c2fdb524 85 Gene3D G3DSA:3.30.1660.10 21 85 6.1E-21 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS00665 df34f12d92091d2c5f397613c2fdb524 85 SUPERFAMILY SSF159871 3 85 3.92E-24 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS19805 2bfcd77cea49918b961c09e18e62d25e 245 SUPERFAMILY SSF48452 27 121 2.95E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS19805 2bfcd77cea49918b961c09e18e62d25e 245 Pfam PF13525 Outer membrane lipoprotein 28 236 1.7E-84 T 29-03-2018 CKQ55_RS19805 2bfcd77cea49918b961c09e18e62d25e 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 244 3.0E-88 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CKQ55_RS19805 2bfcd77cea49918b961c09e18e62d25e 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.16 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CKQ55_RS19805 2bfcd77cea49918b961c09e18e62d25e 245 Gene3D G3DSA:1.25.20.10 30 244 4.1E-15 T 29-03-2018 CKQ55_RS15240 1895e3da0791c7dac80c8c50327d485b 272 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 153 9.2E-37 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CKQ55_RS15240 1895e3da0791c7dac80c8c50327d485b 272 SUPERFAMILY SSF54534 42 250 2.16E-65 T 29-03-2018 CKQ55_RS15240 1895e3da0791c7dac80c8c50327d485b 272 Gene3D G3DSA:3.10.50.40 135 251 3.5E-43 T 29-03-2018 CKQ55_RS15240 1895e3da0791c7dac80c8c50327d485b 272 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 247 7.4E-28 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CKQ55_RS15240 1895e3da0791c7dac80c8c50327d485b 272 Gene3D G3DSA:1.10.287.460 26 134 3.6E-28 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CKQ55_RS22175 3aa48b6c6e013e4bc0bdf7f295c8304f 345 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 344 3.3E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22175 3aa48b6c6e013e4bc0bdf7f295c8304f 345 Gene3D G3DSA:1.10.3720.10 7 333 6.4E-39 T 29-03-2018 CKQ55_RS22175 3aa48b6c6e013e4bc0bdf7f295c8304f 345 SUPERFAMILY SSF161098 101 169 7.52E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22175 3aa48b6c6e013e4bc0bdf7f295c8304f 345 SUPERFAMILY SSF161098 208 329 7.52E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS30240 c058c43e6d7a0b6f00a65d3be0802fce 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 1.3E-46 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 CKQ55_RS30240 c058c43e6d7a0b6f00a65d3be0802fce 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 1.1E-128 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CKQ55_RS12325 5c220d5a13ddb84c6f1aea3d31a570b6 167 Pfam PF07813 LTXXQ motif family protein 41 136 4.6E-22 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CKQ55_RS12325 5c220d5a13ddb84c6f1aea3d31a570b6 167 PIRSF PIRSF034445 1 146 2.0E-29 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CKQ55_RS13140 5e1dc3781f309228ca496ce8aa0d4fab 137 Gene3D G3DSA:2.60.40.790 5 137 6.6E-20 T 29-03-2018 IPR008978 HSP20-like chaperone CKQ55_RS13140 5e1dc3781f309228ca496ce8aa0d4fab 137 SUPERFAMILY SSF49764 30 137 2.16E-19 T 29-03-2018 IPR008978 HSP20-like chaperone CKQ55_RS13140 5e1dc3781f309228ca496ce8aa0d4fab 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 49.031 T 29-03-2018 IPR023728 Small heat shock protein IbpA CKQ55_RS13140 5e1dc3781f309228ca496ce8aa0d4fab 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.6E-22 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CKQ55_RS27275 900acad59028132b94a6347594d8ce90 185 SUPERFAMILY SSF53254 5 181 8.14E-25 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS27275 900acad59028132b94a6347594d8ce90 185 Gene3D G3DSA:3.40.50.1240 1 184 2.6E-20 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS27275 900acad59028132b94a6347594d8ce90 185 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 180 3.8E-20 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CKQ55_RS01320 aa3686374a66b9ebed10f3ea3e9c3c85 465 SUPERFAMILY SSF75304 1 453 8.63E-129 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS01320 aa3686374a66b9ebed10f3ea3e9c3c85 465 Pfam PF01425 Amidase 24 444 1.2E-101 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS01320 aa3686374a66b9ebed10f3ea3e9c3c85 465 Gene3D G3DSA:3.90.1300.10 6 454 2.1E-132 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CKQ55_RS01320 aa3686374a66b9ebed10f3ea3e9c3c85 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 8 456 4.0E-205 T 29-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 84 94 - T 29-03-2018 IPR019819 Carboxylesterase type B, conserved site CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 182 197 - T 29-03-2018 IPR019826 Carboxylesterase type B, active site CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 PRINTS PR00878 Cholinesterase signature 108 137 5.2E-6 T 29-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 PRINTS PR00878 Cholinesterase signature 400 412 5.2E-6 T 29-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 Pfam PF00135 Carboxylesterase family 6 328 3.3E-91 T 29-03-2018 IPR002018 Carboxylesterase, type B CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 Pfam PF00135 Carboxylesterase family 353 475 7.5E-11 T 29-03-2018 IPR002018 Carboxylesterase, type B CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 SUPERFAMILY SSF53474 6 496 1.54E-110 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS28135 8f2954ff0938e234c4d2db6aac52d49d 502 Gene3D G3DSA:3.40.50.1820 2 500 3.4E-119 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 Gene3D G3DSA:1.10.10.10 8 154 1.8E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 Pfam PF01047 MarR family 36 94 7.8E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 SUPERFAMILY SSF46785 10 147 4.23E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 5.7E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 5.7E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 5.7E-9 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS09230 fc9b1e04343fb7d94e042125905899af 154 SMART SM00347 29 130 2.9E-19 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS19875 c8246374b1e3f5a70bc7fa6dad561258 232 SMART SM01144 27 218 4.0E-71 T 29-03-2018 IPR005636 DTW CKQ55_RS19875 c8246374b1e3f5a70bc7fa6dad561258 232 Pfam PF03942 DTW domain 30 212 8.4E-42 T 29-03-2018 IPR005636 DTW CKQ55_RS19635 e749ae6f60bc43ff9d9c7587bb2558a9 106 Pfam PF17345 Family of unknown function (DUF5375) 1 106 1.1E-60 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CKQ55_RS19635 e749ae6f60bc43ff9d9c7587bb2558a9 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 20 106 4.0E-43 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CKQ55_RS25615 5e4f672a21d57e8badb57f063143f72c 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 118.054 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CKQ55_RS25615 5e4f672a21d57e8badb57f063143f72c 214 SMART SM00479 18 203 5.0E-34 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS25615 5e4f672a21d57e8badb57f063143f72c 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 7.6E-109 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CKQ55_RS25615 5e4f672a21d57e8badb57f063143f72c 214 Pfam PF00929 Exonuclease 20 194 3.0E-39 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CKQ55_RS25615 5e4f672a21d57e8badb57f063143f72c 214 Gene3D G3DSA:3.30.420.10 9 212 1.7E-30 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS25615 5e4f672a21d57e8badb57f063143f72c 214 SUPERFAMILY SSF53098 12 207 1.19E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS27775 abfa15a76c38f1dc299faa3758a2087d 551 SUPERFAMILY SSF161098 288 548 5.1E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27775 abfa15a76c38f1dc299faa3758a2087d 551 Gene3D G3DSA:1.10.3720.10 4 271 4.9E-33 T 29-03-2018 CKQ55_RS27775 abfa15a76c38f1dc299faa3758a2087d 551 Gene3D G3DSA:1.10.3720.10 288 550 1.4E-28 T 29-03-2018 CKQ55_RS27775 abfa15a76c38f1dc299faa3758a2087d 551 SUPERFAMILY SSF161098 4 269 3.64E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27775 abfa15a76c38f1dc299faa3758a2087d 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 365 544 4.1E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27775 abfa15a76c38f1dc299faa3758a2087d 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 265 2.8E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06790 7235eb2488b5e0cd6e6717f1338cc838 234 Gene3D G3DSA:2.60.40.10 30 159 4.0E-18 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS06790 7235eb2488b5e0cd6e6717f1338cc838 234 SUPERFAMILY SSF49354 26 130 2.15E-11 T 29-03-2018 IPR008962 PapD-like CKQ55_RS06790 7235eb2488b5e0cd6e6717f1338cc838 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 157 3.0E-7 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS08905 7b40e434c5854fe752a7c8f1d6bc8c4c 258 Pfam PF06738 Putative threonine/serine exporter 13 252 2.2E-69 T 29-03-2018 IPR010619 Putative threonine/serine exporter CKQ55_RS22410 d6a197492dbd2feb7d25cbbbc5f7d889 73 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 5.2E-19 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.3E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.3E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.3E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.3E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.3E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 Pfam PF00361 Proton-conducting membrane transporter 133 430 7.8E-68 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21170 c8d799e467875598cfbebb3e237c13cb 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 7.4E-181 T 29-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS17975 9cad50a21de771c323f01cc95cc2d3e1 246 Pfam PF06551 Protein of unknown function (DUF1120) 31 130 2.6E-6 T 29-03-2018 IPR010546 Protein of unknown function DUF1120 CKQ55_RS17975 9cad50a21de771c323f01cc95cc2d3e1 246 Gene3D G3DSA:2.60.40.1090 28 246 4.7E-7 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS13565 8a441c68be7637985041e08a8dba2c33 571 Pfam PF05170 AsmA family 249 540 5.4E-16 T 29-03-2018 IPR007844 AsmA CKQ55_RS02450 efbaf94b405739031db07abc6ac4ecb6 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 9.0E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS02450 efbaf94b405739031db07abc6ac4ecb6 180 SUPERFAMILY SSF48498 88 176 4.89E-5 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CKQ55_RS02450 efbaf94b405739031db07abc6ac4ecb6 180 Gene3D G3DSA:1.10.357.10 1 180 2.8E-33 T 29-03-2018 CKQ55_RS02450 efbaf94b405739031db07abc6ac4ecb6 180 SUPERFAMILY SSF46689 2 83 9.75E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS02730 6050350c5385d067653a70916d616566 783 Pfam PF01464 Transglycosylase SLT domain 188 291 4.2E-9 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CKQ55_RS02730 6050350c5385d067653a70916d616566 783 Gene3D G3DSA:1.10.530.10 144 357 1.7E-16 T 29-03-2018 CKQ55_RS02730 6050350c5385d067653a70916d616566 783 SUPERFAMILY SSF53955 188 327 3.75E-17 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS14700 2610de31e2bbd4324c746ca8c17abdaa 349 Pfam PF01594 AI-2E family transporter 14 328 3.2E-80 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 Gene3D G3DSA:3.30.1340.10 1 85 3.7E-32 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 SUPERFAMILY SSF55594 1 82 2.36E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.4E-31 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS20640 4fa7e8caa81cc83f6adad99da67a0679 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.2E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CKQ55_RS18530 d45a47af51110d2dfebb2ac82cfeffad 185 Pfam PF07348 Syd protein (SUKH-2) 7 183 9.0E-67 T 29-03-2018 IPR009948 Syd GO:0009898 CKQ55_RS18530 d45a47af51110d2dfebb2ac82cfeffad 185 Hamap MF_01104 Protein Syd [syd]. 3 185 32.895 T 29-03-2018 IPR009948 Syd GO:0009898 CKQ55_RS18530 d45a47af51110d2dfebb2ac82cfeffad 185 Gene3D G3DSA:3.10.450.50 2 127 7.7E-4 T 29-03-2018 CKQ55_RS17960 134bed6bdae71088a7fd76570cd0ddcb 296 Gene3D G3DSA:1.10.3720.10 57 285 6.4E-46 T 29-03-2018 CKQ55_RS17960 134bed6bdae71088a7fd76570cd0ddcb 296 Gene3D G3DSA:1.20.58.370 1 39 3.4E-5 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CKQ55_RS17960 134bed6bdae71088a7fd76570cd0ddcb 296 SUPERFAMILY SSF161098 50 275 4.71E-59 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS17960 134bed6bdae71088a7fd76570cd0ddcb 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 276 3.5E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS10895 bc358564033f1704b9bb6bfa7198ce36 311 Gene3D G3DSA:3.40.50.2300 28 144 1.9E-15 T 29-03-2018 CKQ55_RS10895 bc358564033f1704b9bb6bfa7198ce36 311 Pfam PF13407 Periplasmic binding protein domain 28 288 7.4E-59 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS10895 bc358564033f1704b9bb6bfa7198ce36 311 SUPERFAMILY SSF53822 28 311 2.98E-73 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS10895 bc358564033f1704b9bb6bfa7198ce36 311 Gene3D G3DSA:3.40.50.2300 145 299 1.8E-40 T 29-03-2018 CKQ55_RS10380 04171e2e3885ae600c97dec03e80651d 316 SUPERFAMILY SSF103481 202 305 5.75E-9 T 29-03-2018 CKQ55_RS10380 04171e2e3885ae600c97dec03e80651d 316 SUPERFAMILY SSF103481 54 158 4.18E-15 T 29-03-2018 CKQ55_RS10380 04171e2e3885ae600c97dec03e80651d 316 Pfam PF00892 EamA-like transporter family 169 302 6.0E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS10380 04171e2e3885ae600c97dec03e80651d 316 Pfam PF00892 EamA-like transporter family 14 155 2.0E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS31810 96fde5250f53a1d31ad7dee3adfbc4f7 94 Gene3D G3DSA:1.10.1220.10 27 77 5.0E-4 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 Gene3D G3DSA:1.10.10.10 1 139 9.3E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 Pfam PF01047 MarR family 31 89 8.8E-19 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 SMART SM00347 24 125 2.0E-31 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 3 145 41.864 T 29-03-2018 IPR023071 Transcriptional regulator, SlyA CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 SUPERFAMILY SSF46785 3 142 3.67E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 3.4E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.4E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.4E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS25665 4f8ba90a0dd61ecfa819e96d18779cff 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 3.4E-28 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CKQ55_RS11810 174593ccb993e35c015f0df1416d6437 207 Pfam PF01810 LysE type translocator 14 206 8.2E-54 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS11810 174593ccb993e35c015f0df1416d6437 207 PIRSF PIRSF006324 1 207 8.2E-42 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS11810 174593ccb993e35c015f0df1416d6437 207 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 203 2.1E-66 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CKQ55_RS24170 e3282c3b444a0bbe03ddae5a405fc822 479 PIRSF PIRSF005522 1 478 4.0E-233 T 29-03-2018 IPR016450 Uncharacterised conserved protein UCP005522 CKQ55_RS24170 e3282c3b444a0bbe03ddae5a405fc822 479 Gene3D G3DSA:3.30.470.20 43 256 0.22 T 29-03-2018 CKQ55_RS24170 e3282c3b444a0bbe03ddae5a405fc822 479 SUPERFAMILY SSF56059 20 216 3.31E-65 T 29-03-2018 CKQ55_RS24170 e3282c3b444a0bbe03ddae5a405fc822 479 SUPERFAMILY SSF56059 321 466 3.31E-65 T 29-03-2018 CKQ55_RS24170 e3282c3b444a0bbe03ddae5a405fc822 479 Gene3D G3DSA:3.30.470.20 340 468 0.002 T 29-03-2018 CKQ55_RS24170 e3282c3b444a0bbe03ddae5a405fc822 479 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 451 1.3E-162 T 29-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Gene3D G3DSA:3.10.20.310 267 346 2.8E-11 T 29-03-2018 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 809 26.296 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Gene3D G3DSA:3.10.20.310 175 266 5.2E-21 T 29-03-2018 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Gene3D G3DSA:2.40.160.50 388 809 4.0E-88 T 29-03-2018 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Pfam PF01103 Surface antigen 448 809 3.0E-102 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Gene3D G3DSA:3.10.20.310 92 174 4.1E-12 T 29-03-2018 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Gene3D G3DSA:3.10.20.310 350 387 0.013 T 29-03-2018 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 809 4.1E-289 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 PIRSF PIRSF006076 1 809 1.9E-258 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Pfam PF07244 Surface antigen variable number repeat 176 263 4.4E-16 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Pfam PF07244 Surface antigen variable number repeat 266 344 1.1E-10 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Pfam PF07244 Surface antigen variable number repeat 92 172 7.8E-11 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Pfam PF07244 Surface antigen variable number repeat 347 421 7.0E-14 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CKQ55_RS07570 b33eb490dd7578f42ce24cf643acf59b 809 Gene3D G3DSA:3.10.20.310 21 91 4.0E-8 T 29-03-2018 CKQ55_RS10445 9d2da343eb358223d91276fe7e464944 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 4.8E-15 T 29-03-2018 CKQ55_RS10445 9d2da343eb358223d91276fe7e464944 354 SUPERFAMILY SSF56281 36 304 3.36E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS10445 9d2da343eb358223d91276fe7e464944 354 Gene3D G3DSA:3.60.15.10 1 337 3.0E-49 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS30225 acae49980d9688cdf3e052f8e7458048 393 Gene3D G3DSA:1.20.1530.10 14 390 6.2E-145 T 29-03-2018 IPR023171 Na/H antiporter domain CKQ55_RS30225 acae49980d9688cdf3e052f8e7458048 393 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 16 390 23.037 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CKQ55_RS30225 acae49980d9688cdf3e052f8e7458048 393 Pfam PF06965 Na+/H+ antiporter 1 18 384 1.5E-141 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CKQ55_RS30225 acae49980d9688cdf3e052f8e7458048 393 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 19 383 8.6E-135 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CKQ55_RS11540 4c11cb5b6c7b2219cf869848c87b6548 446 PIRSF PIRSF004539 1 444 3.6E-196 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS11540 4c11cb5b6c7b2219cf869848c87b6548 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 2.9E-199 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS11540 4c11cb5b6c7b2219cf869848c87b6548 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 1.1E-148 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CKQ55_RS08510 40d0a478387d82be8c7bab4eb502fae4 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 474 1.1E-172 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS08510 40d0a478387d82be8c7bab4eb502fae4 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 1.4E-157 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS08510 40d0a478387d82be8c7bab4eb502fae4 477 PIRSF PIRSF002457 1 474 1.0E-136 T 29-03-2018 IPR030676 Citrate carrier CitT-related CKQ55_RS07275 ef158b141746a8544cf8d74508436b39 149 SUPERFAMILY SSF55729 2 142 3.9E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS07275 ef158b141746a8544cf8d74508436b39 149 Pfam PF13673 Acetyltransferase (GNAT) domain 24 137 1.8E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS07275 ef158b141746a8544cf8d74508436b39 149 Gene3D G3DSA:3.40.630.30 1 149 1.4E-24 T 29-03-2018 CKQ55_RS12220 76291d9739ade439c23c67be9839dfff 215 SUPERFAMILY SSF50814 32 215 8.12E-73 T 29-03-2018 IPR012674 Calycin CKQ55_RS12220 76291d9739ade439c23c67be9839dfff 215 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 215 2.0E-82 T 29-03-2018 IPR015304 ZinT domain GO:0008270 CKQ55_RS12220 76291d9739ade439c23c67be9839dfff 215 Gene3D G3DSA:2.40.128.20 29 215 2.4E-67 T 29-03-2018 IPR012674 Calycin CKQ55_RS13770 51b9a7e6087972b83eb5009b04fa908b 362 Pfam PF04932 O-Antigen ligase 165 297 8.4E-19 T 29-03-2018 IPR007016 O-antigen ligase-related CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.1E-72 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 234 1.5E-111 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 Gene3D G3DSA:1.10.1270.20 170 254 6.5E-36 T 29-03-2018 CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 PIRSF PIRSF000386 1 253 1.2E-103 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 Gene3D G3DSA:3.40.1280.10 1 169 2.7E-72 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 SUPERFAMILY SSF75217 2 247 3.4E-102 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CKQ55_RS19745 bb3da549e7f3db0a4b06631557540799 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 120.209 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CKQ55_RS19935 ea23f6314db6a93968a916b200e99d02 159 PIRSF PIRSF004923 1 150 7.7E-41 T 29-03-2018 IPR026268 Protein RseC CKQ55_RS19935 ea23f6314db6a93968a916b200e99d02 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 3.3E-32 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 SUPERFAMILY SSF51735 202 446 1.1E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 Gene3D G3DSA:3.40.50.720 209 373 8.2E-47 T 29-03-2018 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 SUPERFAMILY SSF53223 7 196 8.0E-74 T 29-03-2018 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 183 1.1E-48 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 3.1E-87 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 Gene3D G3DSA:1.10.285.10 6 61 2.8E-7 T 29-03-2018 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 Gene3D G3DSA:1.10.285.10 374 447 6.0E-26 T 29-03-2018 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 PIRSF PIRSF000185 22 447 9.8E-116 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 Gene3D G3DSA:3.40.50.10860 62 190 3.0E-54 T 29-03-2018 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 SMART SM00839 204 445 3.7E-92 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 6.1E-34 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 6.1E-34 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 6.1E-34 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS29780 4547d24862649153d4af55ee548a34e1 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 6.1E-34 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CKQ55_RS30440 6ef0ce321bc578b00de08f5173db6bc4 73 Gene3D G3DSA:3.90.1680.10 1 64 6.2E-8 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) CKQ55_RS30440 6ef0ce321bc578b00de08f5173db6bc4 73 SUPERFAMILY SSF143081 2 59 1.57E-6 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) CKQ55_RS16455 1730505ddd634ae6ee5f87145f4757bb 344 Gene3D G3DSA:1.10.3470.10 22 306 2.7E-31 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS16455 1730505ddd634ae6ee5f87145f4757bb 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 300 8.2E-46 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS27730 959a35066af91af06cd774bb2d7740e9 292 Pfam PF00892 EamA-like transporter family 158 285 2.3E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS27730 959a35066af91af06cd774bb2d7740e9 292 SUPERFAMILY SSF103481 189 288 1.57E-7 T 29-03-2018 CKQ55_RS31650 24cc5050326f40f0199d49c60aaf0dd0 130 Pfam PF13117 Cag pathogenicity island protein Cag12 8 113 1.4E-35 T 29-03-2018 IPR025264 Cag pathogenicity island protein Cag12 CKQ55_RS05555 e3419a1e782da7c35182ef20a1da315f 155 SUPERFAMILY SSF103370 2 146 1.2E-38 T 29-03-2018 IPR008711 Recombinase NinB CKQ55_RS05555 e3419a1e782da7c35182ef20a1da315f 155 Gene3D G3DSA:1.10.3790.10 1 151 2.8E-32 T 29-03-2018 IPR008711 Recombinase NinB CKQ55_RS05555 e3419a1e782da7c35182ef20a1da315f 155 Pfam PF05772 NinB protein 2 133 8.2E-46 T 29-03-2018 IPR008711 Recombinase NinB CKQ55_RS26385 9d44aaa3d821bc4cd3f676f78234cf35 524 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 230 521 5.3E-129 T 29-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CKQ55_RS26385 9d44aaa3d821bc4cd3f676f78234cf35 524 Pfam PF02653 Branched-chain amino acid transport system / permease component 232 507 1.4E-49 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26385 9d44aaa3d821bc4cd3f676f78234cf35 524 SUPERFAMILY SSF48371 110 221 4.97E-7 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 CKQ55_RS26385 9d44aaa3d821bc4cd3f676f78234cf35 524 Gene3D G3DSA:1.10.3470.10 181 511 4.5E-51 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS06405 8399239849b8b5e3e4ff3f38bde47d4f 121 SUPERFAMILY SSF54593 3 120 1.41E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS06405 8399239849b8b5e3e4ff3f38bde47d4f 121 Gene3D G3DSA:3.10.180.10 1 121 2.8E-13 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS13420 54a289ead215f1f53d366a8fd3f14f11 156 SUPERFAMILY SSF54427 3 156 3.46E-80 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS13420 54a289ead215f1f53d366a8fd3f14f11 156 Gene3D G3DSA:3.10.450.50 12 156 2.3E-70 T 29-03-2018 CKQ55_RS13420 54a289ead215f1f53d366a8fd3f14f11 156 Pfam PF07080 Protein of unknown function (DUF1348) 9 138 2.1E-66 T 29-03-2018 IPR009783 Protein of unknown function DUF1348 CKQ55_RS15070 4e08b1f4a15a073011be6052755cff60 428 Hamap MF_02021 Cell division protein DamX [damX]. 1 428 25.115 T 29-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 CKQ55_RS15070 4e08b1f4a15a073011be6052755cff60 428 SUPERFAMILY SSF110997 344 408 1.7E-6 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS15070 4e08b1f4a15a073011be6052755cff60 428 Gene3D G3DSA:3.30.70.1070 346 411 4.3E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS15070 4e08b1f4a15a073011be6052755cff60 428 Pfam PF05036 Sporulation related domain 344 417 4.1E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CKQ55_RS28950 97b8e15e2dc66c60ecb0e7b4cccb7a9e 1077 Pfam PF06744 Type VI secretion protein IcmF C-terminal 804 1002 3.0E-55 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CKQ55_RS28950 97b8e15e2dc66c60ecb0e7b4cccb7a9e 1077 Pfam PF06761 Intracellular multiplication and human macrophage-killing 354 671 1.2E-70 T 29-03-2018 IPR009612 ImcF-related CKQ55_RS03935 66a9b9adea6bc9e78413bb6358e5be75 379 Gene3D G3DSA:3.30.70.20 8 101 1.5E-4 T 29-03-2018 CKQ55_RS03935 66a9b9adea6bc9e78413bb6358e5be75 379 SUPERFAMILY SSF54862 24 75 2.23E-6 T 29-03-2018 CKQ55_RS03935 66a9b9adea6bc9e78413bb6358e5be75 379 TIGRFAM TIGR02484 CitB: CitB domain protein 15 376 8.3E-118 T 29-03-2018 IPR012830 Citrate utilization protein B CKQ55_RS03935 66a9b9adea6bc9e78413bb6358e5be75 379 SUPERFAMILY SSF103501 157 370 1.7E-33 T 29-03-2018 IPR023234 NarG-like domain CKQ55_RS03935 66a9b9adea6bc9e78413bb6358e5be75 379 Gene3D G3DSA:1.20.950.20 152 363 5.1E-32 T 29-03-2018 CKQ55_RS22860 99b6e131e20dded87c037db8e61264c9 72 Gene3D G3DSA:2.40.50.240 1 68 1.6E-19 T 29-03-2018 IPR024044 NifT/FixU barrel-like domain CKQ55_RS22860 99b6e131e20dded87c037db8e61264c9 72 SUPERFAMILY SSF159203 3 68 5.89E-19 T 29-03-2018 IPR024044 NifT/FixU barrel-like domain CKQ55_RS22860 99b6e131e20dded87c037db8e61264c9 72 Pfam PF06988 NifT/FixU protein 1 66 2.5E-18 T 29-03-2018 IPR009727 NifT/FixU GO:0009399 CKQ55_RS22860 99b6e131e20dded87c037db8e61264c9 72 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 1 68 1.2E-13 T 29-03-2018 IPR009727 NifT/FixU GO:0009399 CKQ55_RS20255 8796a093b2035d0d710b2dc85aa37a2d 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 8.1E-33 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CKQ55_RS20255 8796a093b2035d0d710b2dc85aa37a2d 458 Gene3D G3DSA:1.20.5.340 307 400 0.08 T 29-03-2018 CKQ55_RS20255 8796a093b2035d0d710b2dc85aa37a2d 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 7.8E-104 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CKQ55_RS20255 8796a093b2035d0d710b2dc85aa37a2d 458 Gene3D G3DSA:2.40.50.140 4 105 1.3E-9 T 29-03-2018 CKQ55_RS20255 8796a093b2035d0d710b2dc85aa37a2d 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.426 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS20255 8796a093b2035d0d710b2dc85aa37a2d 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 8.2E-140 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CKQ55_RS13430 30aeee5d748b0f3b776710385c214462 286 SUPERFAMILY SSF103481 40 136 1.07E-8 T 29-03-2018 CKQ55_RS13430 30aeee5d748b0f3b776710385c214462 286 SUPERFAMILY SSF103481 189 279 9.42E-11 T 29-03-2018 CKQ55_RS13430 30aeee5d748b0f3b776710385c214462 286 Pfam PF00892 EamA-like transporter family 8 135 8.3E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS13430 30aeee5d748b0f3b776710385c214462 286 Pfam PF00892 EamA-like transporter family 148 273 2.7E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS18695 7a0c932029a30f8ef73272642a039abd 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.6E-168 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CKQ55_RS18695 7a0c932029a30f8ef73272642a039abd 302 Gene3D G3DSA:3.40.50.620 2 300 4.8E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS18695 7a0c932029a30f8ef73272642a039abd 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.0E-66 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CKQ55_RS18695 7a0c932029a30f8ef73272642a039abd 302 SUPERFAMILY SSF52402 6 209 7.72E-76 T 29-03-2018 CKQ55_RS18695 7a0c932029a30f8ef73272642a039abd 302 PIRSF PIRSF002936 1 302 2.1E-156 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CKQ55_RS18695 7a0c932029a30f8ef73272642a039abd 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.413 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CKQ55_RS28115 e4f2e1b710155517318252ae9211782a 332 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 13 316 5.2E-100 T 29-03-2018 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 CKQ55_RS28115 e4f2e1b710155517318252ae9211782a 332 Pfam PF03595 Voltage-dependent anion channel 12 309 4.9E-39 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CKQ55_RS26765 c6e5ef132e80fd890b51f885c222e18b 318 SUPERFAMILY SSF53807 39 314 1.92E-47 T 29-03-2018 CKQ55_RS26765 c6e5ef132e80fd890b51f885c222e18b 318 Gene3D G3DSA:3.40.50.1980 155 318 3.4E-35 T 29-03-2018 CKQ55_RS26765 c6e5ef132e80fd890b51f885c222e18b 318 Gene3D G3DSA:3.40.50.1980 15 154 8.1E-27 T 29-03-2018 CKQ55_RS26765 c6e5ef132e80fd890b51f885c222e18b 318 Pfam PF01497 Periplasmic binding protein 50 286 5.0E-23 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CKQ55_RS09005 8f81f416e2d8bca7eb87f173711f7a45 381 Gene3D G3DSA:1.20.1250.20 1 160 4.9E-31 T 29-03-2018 CKQ55_RS09005 8f81f416e2d8bca7eb87f173711f7a45 381 Pfam PF07690 Major Facilitator Superfamily 1 336 2.7E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS09005 8f81f416e2d8bca7eb87f173711f7a45 381 SUPERFAMILY SSF103473 1 374 7.85E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS09005 8f81f416e2d8bca7eb87f173711f7a45 381 Gene3D G3DSA:1.20.1250.20 175 379 3.7E-25 T 29-03-2018 CKQ55_RS06810 7d8205bccf5c3a3fa794520a559f6c8c 195 Pfam PF16449 Fimbrillin MatB 26 193 7.8E-87 T 29-03-2018 IPR016514 Fimbrial protein MatB CKQ55_RS06810 7d8205bccf5c3a3fa794520a559f6c8c 195 PIRSF PIRSF007320 1 195 1.2E-111 T 29-03-2018 IPR016514 Fimbrial protein MatB CKQ55_RS19985 e5f80ffc2d7fab9bcfd8e778f8866143 86 Gene3D G3DSA:3.30.70.20 2 84 7.0E-16 T 29-03-2018 CKQ55_RS19985 e5f80ffc2d7fab9bcfd8e778f8866143 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.7E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CKQ55_RS19985 e5f80ffc2d7fab9bcfd8e778f8866143 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CKQ55_RS19985 e5f80ffc2d7fab9bcfd8e778f8866143 86 SUPERFAMILY SSF54862 5 63 2.46E-17 T 29-03-2018 CKQ55_RS20835 cfa325757958bdcb509fdf3568fd627a 456 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 456 6.5E-147 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CKQ55_RS20835 cfa325757958bdcb509fdf3568fd627a 456 Gene3D G3DSA:2.40.160.60 28 456 1.6E-87 T 29-03-2018 CKQ55_RS20835 cfa325757958bdcb509fdf3568fd627a 456 SUPERFAMILY SSF56935 28 456 6.41E-108 T 29-03-2018 CKQ55_RS10785 baac8e1c746dc1f6788d769a6bc76c01 195 SUPERFAMILY SSF52218 1 194 5.43E-47 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS10785 baac8e1c746dc1f6788d769a6bc76c01 195 Pfam PF02525 Flavodoxin-like fold 1 170 1.1E-42 T 29-03-2018 IPR003680 Flavodoxin-like fold CKQ55_RS10785 baac8e1c746dc1f6788d769a6bc76c01 195 Gene3D G3DSA:3.40.50.360 1 194 2.6E-38 T 29-03-2018 IPR029039 Flavoprotein-like domain CKQ55_RS10195 dc38f2a854d08ce32ec8dc27f8a82735 120 Gene3D G3DSA:3.40.1190.20 10 119 3.2E-4 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS10195 dc38f2a854d08ce32ec8dc27f8a82735 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 2.2E-66 T 29-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CKQ55_RS10195 dc38f2a854d08ce32ec8dc27f8a82735 120 Pfam PF14272 Glycine-rich SFCGS 4 117 1.7E-58 T 29-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CKQ55_RS06245 6a16758fba22ce949b22914476206bf9 203 Pfam PF00510 Cytochrome c oxidase subunit III 15 201 1.6E-16 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06245 6a16758fba22ce949b22914476206bf9 203 SUPERFAMILY SSF81452 9 201 3.14E-60 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS06245 6a16758fba22ce949b22914476206bf9 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 203 6.6E-89 T 29-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CKQ55_RS06245 6a16758fba22ce949b22914476206bf9 203 Gene3D G3DSA:1.20.120.80 18 203 7.5E-52 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CKQ55_RS00385 1db6100949a9988aee0648f55fd14be2 152 Pfam PF06069 PerC transcriptional activator 83 132 8.3E-6 T 29-03-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 CKQ55_RS00385 1db6100949a9988aee0648f55fd14be2 152 ProDom PD096295 YFDN SB43 ORF40 92 147 0.001 T 29-03-2018 IPR020344 Bacteriophage SfV, Orf40 CKQ55_RS00015 1db6100949a9988aee0648f55fd14be2 152 Pfam PF06069 PerC transcriptional activator 83 132 8.3E-6 T 29-03-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 CKQ55_RS00015 1db6100949a9988aee0648f55fd14be2 152 ProDom PD096295 YFDN SB43 ORF40 92 147 0.001 T 29-03-2018 IPR020344 Bacteriophage SfV, Orf40 CKQ55_RS04455 c75059eb9fadfcda2d006538dcb28774 335 SUPERFAMILY SSF81345 9 328 3.27E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS04455 c75059eb9fadfcda2d006538dcb28774 335 Gene3D G3DSA:1.10.3470.10 4 334 8.8E-64 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS04455 c75059eb9fadfcda2d006538dcb28774 335 Pfam PF01032 FecCD transport family 20 328 4.4E-91 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS28125 1b2076f1c36aa3b6e28baef4f06b384b 194 SUPERFAMILY SSF55729 12 182 3.78E-41 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS28125 1b2076f1c36aa3b6e28baef4f06b384b 194 Pfam PF13302 Acetyltransferase (GNAT) domain 18 158 1.1E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS28125 1b2076f1c36aa3b6e28baef4f06b384b 194 Gene3D G3DSA:3.40.630.30 1 184 2.2E-27 T 29-03-2018 CKQ55_RS00615 7d6101455b45389fc0050e961ef0589c 335 SUPERFAMILY SSF53659 6 329 2.03E-94 T 29-03-2018 CKQ55_RS00615 7d6101455b45389fc0050e961ef0589c 335 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 36 324 7.7E-92 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS00615 7d6101455b45389fc0050e961ef0589c 335 Gene3D G3DSA:3.40.718.10 1 333 2.7E-112 T 29-03-2018 CKQ55_RS00615 7d6101455b45389fc0050e961ef0589c 335 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 330 30.011 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS00615 7d6101455b45389fc0050e961ef0589c 335 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 327 3.0E-91 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CKQ55_RS24085 48c091e2bfa0da4f677862009ce70e77 219 Gene3D G3DSA:3.90.850.10 2 217 3.5E-71 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS24085 48c091e2bfa0da4f677862009ce70e77 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 212 1.7E-51 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS24085 48c091e2bfa0da4f677862009ce70e77 219 SUPERFAMILY SSF56529 11 216 4.97E-69 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS16950 3549cbfad034bfb1e25c980ea9e80066 623 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 251 615 2.2E-65 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CKQ55_RS16950 3549cbfad034bfb1e25c980ea9e80066 623 Pfam PF05257 CHAP domain 52 149 2.3E-11 T 29-03-2018 IPR007921 CHAP domain CKQ55_RS16950 3549cbfad034bfb1e25c980ea9e80066 623 SUPERFAMILY SSF56059 497 614 3.88E-74 T 29-03-2018 CKQ55_RS16950 3549cbfad034bfb1e25c980ea9e80066 623 SUPERFAMILY SSF56059 211 379 3.88E-74 T 29-03-2018 CKQ55_RS16950 3549cbfad034bfb1e25c980ea9e80066 623 SUPERFAMILY SSF52440 380 510 1.06E-36 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CKQ55_RS16950 3549cbfad034bfb1e25c980ea9e80066 623 SUPERFAMILY SSF54001 10 194 3.63E-59 T 29-03-2018 CKQ55_RS06780 c9577f4eadfdf32f1226f5123352d055 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 238 1.6E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06780 c9577f4eadfdf32f1226f5123352d055 249 SUPERFAMILY SSF161098 17 224 5.15E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06780 c9577f4eadfdf32f1226f5123352d055 249 Gene3D G3DSA:1.10.3720.10 4 245 2.9E-32 T 29-03-2018 CKQ55_RS06780 c9577f4eadfdf32f1226f5123352d055 249 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 80 1.6E-14 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS29145 a84c0b4555ee80ef03eac22a6883bd19 139 Gene3D G3DSA:2.40.50.100 52 131 7.0E-9 T 29-03-2018 CKQ55_RS29145 a84c0b4555ee80ef03eac22a6883bd19 139 SUPERFAMILY SSF51230 55 129 1.57E-11 T 29-03-2018 IPR011053 Single hybrid motif CKQ55_RS29145 a84c0b4555ee80ef03eac22a6883bd19 139 Pfam PF00364 Biotin-requiring enzyme 59 129 3.3E-8 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CKQ55_RS16165 845a8fa6b69f6515195fef81458d6cf3 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 33.718 T 29-03-2018 IPR011194 Uncharacterised protein family UPF0306 CKQ55_RS16165 845a8fa6b69f6515195fef81458d6cf3 147 SUPERFAMILY SSF50475 3 140 4.77E-17 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS16165 845a8fa6b69f6515195fef81458d6cf3 147 Gene3D G3DSA:2.30.110.10 2 145 2.2E-15 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS16165 845a8fa6b69f6515195fef81458d6cf3 147 PIRSF PIRSF009554 1 145 3.8E-57 T 29-03-2018 IPR011194 Uncharacterised protein family UPF0306 CKQ55_RS04610 9651c39488458c48f4a0310c9cc96ae9 234 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS04610 9651c39488458c48f4a0310c9cc96ae9 234 SMART SM00382 28 216 3.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS04610 9651c39488458c48f4a0310c9cc96ae9 234 Pfam PF00005 ABC transporter 21 167 4.4E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS04610 9651c39488458c48f4a0310c9cc96ae9 234 Gene3D G3DSA:3.40.50.300 1 232 5.0E-63 T 29-03-2018 CKQ55_RS04610 9651c39488458c48f4a0310c9cc96ae9 234 SUPERFAMILY SSF52540 4 227 1.08E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21030 b350fe56ba5334fed6316fc3beee191f 184 Gene3D G3DSA:3.90.79.10 2 181 5.0E-39 T 29-03-2018 CKQ55_RS21030 b350fe56ba5334fed6316fc3beee191f 184 PIRSF PIRSF017340 1 172 1.6E-72 T 29-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 CKQ55_RS21030 b350fe56ba5334fed6316fc3beee191f 184 Pfam PF00293 NUDIX domain 37 155 2.3E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS21030 b350fe56ba5334fed6316fc3beee191f 184 SUPERFAMILY SSF55811 10 166 7.99E-35 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS14885 bfa7694e857b7d874f52ddc80d3e78b9 163 Pfam PF00583 Acetyltransferase (GNAT) family 35 136 9.1E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS14885 bfa7694e857b7d874f52ddc80d3e78b9 163 Gene3D G3DSA:3.40.630.30 1 163 6.4E-35 T 29-03-2018 CKQ55_RS14885 bfa7694e857b7d874f52ddc80d3e78b9 163 SUPERFAMILY SSF55729 3 161 4.88E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS12540 f68b05c85c9b30eb5d56b7c5bed5c859 375 SUPERFAMILY SSF56801 50 319 3.05E-5 T 29-03-2018 CKQ55_RS12540 f68b05c85c9b30eb5d56b7c5bed5c859 375 Pfam PF04443 Acyl-protein synthetase, LuxE 22 370 7.8E-23 T 29-03-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 CKQ55_RS12540 f68b05c85c9b30eb5d56b7c5bed5c859 375 PIRSF PIRSF016580 1 375 1.1E-111 T 29-03-2018 IPR016671 Acyl-protein synthetase, LuxE, bacterial GO:0008218|GO:0047474 MetaCyc: PWY-7723 CKQ55_RS23005 c48cfd62c832cc9adc7514eab7e4b917 110 Gene3D G3DSA:2.60.120.10 7 110 1.1E-32 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS23005 c48cfd62c832cc9adc7514eab7e4b917 110 SUPERFAMILY SSF51197 4 108 7.0E-33 T 29-03-2018 CKQ55_RS23005 c48cfd62c832cc9adc7514eab7e4b917 110 PIRSF PIRSF020632 3 108 7.4E-41 T 29-03-2018 IPR014510 Tellurite resistance predicted, YeaR CKQ55_RS23005 c48cfd62c832cc9adc7514eab7e4b917 110 Pfam PF09313 Domain of unknown function (DUF1971) 14 98 3.3E-23 T 29-03-2018 IPR015392 Domain of unknown function DUF1971 CKQ55_RS10455 c0f4522e3f79cc52c01ab73cdf4ce9da 238 Pfam PF00326 Prolyl oligopeptidase family 86 238 8.2E-14 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CKQ55_RS10455 c0f4522e3f79cc52c01ab73cdf4ce9da 238 Gene3D G3DSA:3.40.50.1820 13 238 8.7E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS10455 c0f4522e3f79cc52c01ab73cdf4ce9da 238 SUPERFAMILY SSF53474 15 238 4.12E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS31370 3efce72816918516f7ec866b7bf0e7ff 228 Pfam PF09299 Mu transposase, C-terminal 62 122 4.2E-11 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal CKQ55_RS31370 3efce72816918516f7ec866b7bf0e7ff 228 Gene3D G3DSA:2.30.30.130 63 127 9.0E-12 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 Pfam PF03170 Bacterial cellulose synthase subunit 95 700 1.6E-191 T 29-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 541 560 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 412 433 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 493 512 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 250 273 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 119 140 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 167 190 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS14210 78f069c41518e739cc8d53c01411b0a9 802 PRINTS PR01440 Cellulose synthase subunit B signature 741 761 8.7E-31 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CKQ55_RS10430 0adf7b6e6a609bb738565ccdf04fe51c 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 3.0E-32 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS10430 0adf7b6e6a609bb738565ccdf04fe51c 155 Gene3D G3DSA:3.40.930.10 1 154 4.2E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS10430 0adf7b6e6a609bb738565ccdf04fe51c 155 SUPERFAMILY SSF55804 6 149 2.09E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS10430 0adf7b6e6a609bb738565ccdf04fe51c 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS23400 8dc644e5115380d3314306d410711fa6 303 Pfam PF00892 EamA-like transporter family 150 284 5.5E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS23400 8dc644e5115380d3314306d410711fa6 303 Pfam PF00892 EamA-like transporter family 13 140 9.2E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS23400 8dc644e5115380d3314306d410711fa6 303 SUPERFAMILY SSF103481 43 144 5.75E-10 T 29-03-2018 CKQ55_RS23400 8dc644e5115380d3314306d410711fa6 303 SUPERFAMILY SSF103481 186 287 2.09E-12 T 29-03-2018 CKQ55_RS06495 84e06a8c02769208524ae8b2f3ad8a3f 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.1E-161 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CKQ55_RS06495 84e06a8c02769208524ae8b2f3ad8a3f 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 4.6E-159 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CKQ55_RS01065 274f2b2f2e5ecb68994f938ce5f351bc 502 Pfam PF00474 Sodium:solute symporter family 35 437 1.6E-144 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS01065 274f2b2f2e5ecb68994f938ce5f351bc 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 2.3E-232 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CKQ55_RS01065 274f2b2f2e5ecb68994f938ce5f351bc 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 5.5E-130 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CKQ55_RS01065 274f2b2f2e5ecb68994f938ce5f351bc 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS01065 274f2b2f2e5ecb68994f938ce5f351bc 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CKQ55_RS09550 851c805bbdcc0625ee6680c799ec639e 129 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 111 1.1E-54 T 29-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 SUPERFAMILY SSF52540 1331 1454 3.54E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 SUPERFAMILY SSF52540 1087 1148 3.54E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 SUPERFAMILY SSF52540 1221 1253 3.54E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 Gene3D G3DSA:3.40.50.300 936 1127 3.8E-15 T 29-03-2018 CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 Pfam PF08751 TrwC relaxase 10 283 5.9E-73 T 29-03-2018 IPR014862 TrwC relaxase CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 Pfam PF07057 DNA helicase TraI 1432 1552 5.5E-55 T 29-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 SUPERFAMILY SSF52540 938 1114 5.16E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 Pfam PF13604 AAA domain 970 1157 1.7E-33 T 29-03-2018 CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 4.7E-100 T 29-03-2018 IPR014059 Conjugative relaxase, N-terminal CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 SUPERFAMILY SSF55464 1 299 4.26E-95 T 29-03-2018 CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 Gene3D G3DSA:3.40.50.300 1128 1459 5.1E-4 T 29-03-2018 CKQ55_RS30505 909e73151b72751c6c79ff45d5927130 1752 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1464 0.0 T 29-03-2018 IPR014129 Conjugative transfer relaxase protein TraI CKQ55_RS09195 8a471534b8aa457e523237d0c5e214ea 84 Pfam PF11823 Protein of unknown function (DUF3343) 3 58 2.5E-12 T 29-03-2018 IPR021778 Domain of unknown function DUF3343 CKQ55_RS17670 58784f997241d23271a885d7486f1cd5 445 Gene3D G3DSA:1.20.1250.20 242 445 2.2E-36 T 29-03-2018 CKQ55_RS17670 58784f997241d23271a885d7486f1cd5 445 Gene3D G3DSA:1.20.1250.20 14 211 2.0E-25 T 29-03-2018 CKQ55_RS17670 58784f997241d23271a885d7486f1cd5 445 SUPERFAMILY SSF103473 1 442 5.1E-71 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17670 58784f997241d23271a885d7486f1cd5 445 Pfam PF07690 Major Facilitator Superfamily 31 303 7.6E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS10760 743a8f48c46741f63186b891e521b425 695 Pfam PF06674 Protein of unknown function (DUF1176) 27 336 2.7E-93 T 29-03-2018 IPR009560 Protein of unknown function DUF1176 CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 PIRSF PIRSF012290 1 219 3.9E-84 T 29-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 SUPERFAMILY SSF143414 159 211 1.83E-5 T 29-03-2018 CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 SMART SM00877 35 132 6.2E-4 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 SMART SM00877 142 219 3.6E-6 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 3.1E-100 T 29-03-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 Pfam PF00936 BMC domain 36 107 2.3E-11 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS20530 40f6937068f97a36f4bc4b2a52e9c0d2 219 Pfam PF00936 BMC domain 162 208 5.3E-6 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS07145 c9455ad4a2f81e36200e862a88f52530 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.671 T 29-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CKQ55_RS07145 c9455ad4a2f81e36200e862a88f52530 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 2.7E-41 T 29-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CKQ55_RS24030 bf1f6a7be5dbe4d4cf27c8731da4c9e2 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 29-03-2018 IPR019897 RidA, conserved site CKQ55_RS24030 bf1f6a7be5dbe4d4cf27c8731da4c9e2 114 Pfam PF01042 Endoribonuclease L-PSP 3 114 1.8E-28 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CKQ55_RS24030 bf1f6a7be5dbe4d4cf27c8731da4c9e2 114 Gene3D G3DSA:3.30.1330.40 2 114 3.5E-22 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS24030 bf1f6a7be5dbe4d4cf27c8731da4c9e2 114 SUPERFAMILY SSF55298 2 114 2.36E-27 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CKQ55_RS25625 0709611e27aa0bead531f502cab38e89 365 Gene3D G3DSA:3.20.20.70 5 365 7.7E-126 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS25625 0709611e27aa0bead531f502cab38e89 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 3.9E-88 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CKQ55_RS25625 0709611e27aa0bead531f502cab38e89 365 SUPERFAMILY SSF51395 4 364 1.07E-122 T 29-03-2018 CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 SUPERFAMILY SSF51735 1 332 5.56E-89 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.5E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 Gene3D G3DSA:3.90.25.10 195 334 3.0E-33 T 29-03-2018 CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.8E-29 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 2.8E-29 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.8E-29 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.8E-29 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CKQ55_RS22690 9ba3c08b7ff07b2d46e20dafedbf6f90 334 Gene3D G3DSA:3.40.50.720 1 194 1.1E-35 T 29-03-2018 CKQ55_RS06520 f36110cfb71fa288d6fd5059943d7d4b 120 Gene3D G3DSA:3.40.50.10400 1 119 8.1E-19 T 29-03-2018 IPR027269 Hypothetical PA1492 domain CKQ55_RS12175 550861361817c47f470ec8a307a4bc6f 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CKQ55_RS12175 550861361817c47f470ec8a307a4bc6f 211 Gene3D G3DSA:1.10.357.10 3 199 1.6E-26 T 29-03-2018 CKQ55_RS12175 550861361817c47f470ec8a307a4bc6f 211 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 2 210 52.601 T 29-03-2018 IPR023764 Transcriptional repressor HTH, FabR CKQ55_RS12175 550861361817c47f470ec8a307a4bc6f 211 SUPERFAMILY SSF46689 2 78 5.67E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS02325 acdaef4d2bf96ad9f7d9dacf8689c499 477 Gene3D G3DSA:3.30.530.20 325 476 3.3E-6 T 29-03-2018 IPR023393 START-like domain CKQ55_RS02325 acdaef4d2bf96ad9f7d9dacf8689c499 477 SUPERFAMILY SSF51735 3 292 2.92E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS02325 acdaef4d2bf96ad9f7d9dacf8689c499 477 Gene3D G3DSA:3.40.50.720 2 302 2.0E-28 T 29-03-2018 CKQ55_RS02325 acdaef4d2bf96ad9f7d9dacf8689c499 477 Pfam PF13460 NAD(P)H-binding 9 138 1.4E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS02325 acdaef4d2bf96ad9f7d9dacf8689c499 477 Pfam PF11066 Protein of unknown function (DUF2867) 332 463 1.0E-12 T 29-03-2018 IPR021295 Protein of unknown function DUF2867 CKQ55_RS02325 acdaef4d2bf96ad9f7d9dacf8689c499 477 SUPERFAMILY SSF55961 335 472 1.19E-5 T 29-03-2018 CKQ55_RS18345 8292e1e961bbac5a1f149ad9cf533256 261 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 242 1.5E-71 T 29-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CKQ55_RS18345 8292e1e961bbac5a1f149ad9cf533256 261 Gene3D G3DSA:3.40.50.2300 70 261 1.4E-12 T 29-03-2018 CKQ55_RS18345 8292e1e961bbac5a1f149ad9cf533256 261 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 235 8.4E-52 T 29-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CKQ55_RS06085 9b86fc1a60fad2c4fb45ba1a33c8859c 85 Gene3D G3DSA:1.10.1220.10 2 37 1.1E-4 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS14445 59d06ec4869925ac4fad19d413ccf70c 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 1.3E-198 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS14445 59d06ec4869925ac4fad19d413ccf70c 438 PIRSF PIRSF002746 1 438 1.6E-159 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS14445 59d06ec4869925ac4fad19d413ccf70c 438 Pfam PF02447 GntP family permease 1 437 7.7E-184 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS00705 18128b16dc22a1a12030fba4e9326811 272 Gene3D G3DSA:3.90.1200.10 44 272 2.5E-19 T 29-03-2018 CKQ55_RS00705 18128b16dc22a1a12030fba4e9326811 272 Hamap MF_01604 Thiamine kinase [thiK]. 2 269 39.247 T 29-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CKQ55_RS00705 18128b16dc22a1a12030fba4e9326811 272 SUPERFAMILY SSF56112 13 260 1.17E-27 T 29-03-2018 IPR011009 Protein kinase-like domain CKQ55_RS00705 18128b16dc22a1a12030fba4e9326811 272 Pfam PF01636 Phosphotransferase enzyme family 37 221 9.4E-11 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CKQ55_RS09275 286e63c238a99e3616c1ed58cd79417c 447 PIRSF PIRSF006060 1 446 2.1E-56 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS09275 286e63c238a99e3616c1ed58cd79417c 447 Pfam PF13520 Amino acid permease 27 407 2.6E-30 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS14410 ca8694de10d6be8486e34812fbffdfc8 75 Gene3D G3DSA:2.30.30.90 1 75 7.6E-14 T 29-03-2018 CKQ55_RS14410 ca8694de10d6be8486e34812fbffdfc8 75 SUPERFAMILY SSF50037 2 72 1.01E-16 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CKQ55_RS14410 ca8694de10d6be8486e34812fbffdfc8 75 Pfam PF04023 FeoA domain 8 70 4.5E-8 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CKQ55_RS14410 ca8694de10d6be8486e34812fbffdfc8 75 SMART SM00899 1 72 6.4E-8 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CKQ55_RS06660 74ba424cabd348a6cae1bc1a27208f7d 283 SUPERFAMILY SSF51197 5 281 6.87E-99 T 29-03-2018 CKQ55_RS06660 74ba424cabd348a6cae1bc1a27208f7d 283 Gene3D G3DSA:3.60.130.10 1 283 9.6E-87 T 29-03-2018 CKQ55_RS06660 74ba424cabd348a6cae1bc1a27208f7d 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 1.6E-67 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CKQ55_RS27335 f073be4a39b2ebc18dff6be350b6ddb6 53 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CKQ55_RS27335 f073be4a39b2ebc18dff6be350b6ddb6 53 Pfam PF01679 Proteolipid membrane potential modulator 3 48 2.4E-18 T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CKQ55_RS22705 7a83a3169f46bae1e1c15e1f18ea1ec5 630 SUPERFAMILY SSF53448 278 556 1.86E-55 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22705 7a83a3169f46bae1e1c15e1f18ea1ec5 630 Gene3D G3DSA:3.90.550.10 277 572 2.7E-49 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22705 7a83a3169f46bae1e1c15e1f18ea1ec5 630 Pfam PF01501 Glycosyl transferase family 8 278 545 9.5E-45 T 29-03-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 CKQ55_RS22705 7a83a3169f46bae1e1c15e1f18ea1ec5 630 Pfam PF14393 Domain of unknown function (DUF4422) 5 244 1.3E-72 T 29-03-2018 IPR025536 Domain of unknown function DUF4422 CKQ55_RS31340 178c6ec03895195a62cdea0aacc41794 80 Gene3D G3DSA:3.40.630.30 1 71 2.9E-4 T 29-03-2018 CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 SUPERFAMILY SSF50692 1 121 2.24E-46 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.128 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-61 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.3E-65 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 Pfam PF02261 Aspartate decarboxylase 1 114 3.7E-47 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 PIRSF PIRSF006246 1 125 7.2E-51 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CKQ55_RS07855 3627d40341799b310e1679244e64b808 126 Gene3D G3DSA:2.40.40.20 1 117 2.1E-51 T 29-03-2018 CKQ55_RS03435 32d08b9f09f09199105368b034c8c51b 158 Gene3D G3DSA:3.40.630.30 9 157 8.9E-27 T 29-03-2018 CKQ55_RS03435 32d08b9f09f09199105368b034c8c51b 158 Pfam PF00583 Acetyltransferase (GNAT) family 43 141 4.4E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS03435 32d08b9f09f09199105368b034c8c51b 158 SUPERFAMILY SSF55729 13 141 3.66E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 SUPERFAMILY SSF46785 4 59 8.31E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 Gene3D G3DSA:1.10.10.10 1 62 3.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 SMART SM00420 5 57 1.6E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 SUPERFAMILY SSF100950 76 234 3.98E-28 T 29-03-2018 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.4E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.4E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 Pfam PF00455 DeoR C terminal sensor domain 76 232 3.5E-44 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 SMART SM01134 74 234 7.4E-53 T 29-03-2018 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 Gene3D G3DSA:3.40.50.1360 67 235 3.1E-30 T 29-03-2018 CKQ55_RS18450 f8d8c515060bf4dc53259ce213a74c78 236 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 6.8E-18 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CKQ55_RS09160 5fa1bb805c00419a4685416318bcc77d 429 Gene3D G3DSA:1.20.120.20 235 382 2.6E-4 T 29-03-2018 CKQ55_RS09160 5fa1bb805c00419a4685416318bcc77d 429 Pfam PF04286 Protein of unknown function (DUF445) 49 421 2.7E-108 T 29-03-2018 IPR007383 Protein of unknown function DUF445 CKQ55_RS24465 91aec381ea96d3b87c79a272f14042d7 80 Pfam PF08980 Domain of unknown function (DUF1883) 13 79 1.7E-5 T 29-03-2018 IPR015073 Atu1913-like CKQ55_RS24465 91aec381ea96d3b87c79a272f14042d7 80 SUPERFAMILY SSF141099 1 80 3.4E-23 T 29-03-2018 IPR015073 Atu1913-like CKQ55_RS24465 91aec381ea96d3b87c79a272f14042d7 80 Gene3D G3DSA:4.10.1210.10 1 80 5.3E-20 T 29-03-2018 IPR015073 Atu1913-like CKQ55_RS09565 27b31e5aa27362bfd28b110b18390b7b 159 SUPERFAMILY SSF102712 56 127 1.02E-5 T 29-03-2018 CKQ55_RS09565 27b31e5aa27362bfd28b110b18390b7b 159 Pfam PF04002 RadC-like JAB domain 38 157 1.1E-42 T 29-03-2018 IPR025657 RadC-like JAB domain CKQ55_RS09565 27b31e5aa27362bfd28b110b18390b7b 159 Gene3D G3DSA:3.40.140.10 35 159 3.2E-44 T 29-03-2018 CKQ55_RS09565 27b31e5aa27362bfd28b110b18390b7b 159 TIGRFAM TIGR00608 radc: DNA repair protein RadC 35 159 2.6E-44 T 29-03-2018 IPR001405 RadC protein CKQ55_RS31565 e816674cc17a33a584e99c01af8df496 67 Gene3D G3DSA:1.10.1660.10 2 58 5.2E-6 T 29-03-2018 CKQ55_RS31565 e816674cc17a33a584e99c01af8df496 67 SUPERFAMILY SSF46955 4 50 7.87E-5 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS30740 158d15afbb54a27f9dd9b338b16f2eea 242 Pfam PF06952 PsiA protein 4 237 2.8E-111 T 29-03-2018 IPR009713 Uncharacterised protein family PsiA CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 29-03-2018 IPR018215 ClpP, Ser active site CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 29-03-2018 IPR033135 ClpP, histidine active site CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 45.114 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 2.6E-112 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 Gene3D G3DSA:3.90.226.10 15 207 8.0E-48 T 29-03-2018 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.2E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 Pfam PF00574 Clp protease 26 205 6.2E-90 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CKQ55_RS06200 ce76245fbaf308d810552cd3abda2764 207 SUPERFAMILY SSF52096 23 206 5.14E-76 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 SUPERFAMILY SSF53850 92 288 1.17E-22 T 29-03-2018 CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 Gene3D G3DSA:3.40.190.10 94 181 1.3E-6 T 29-03-2018 CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 Gene3D G3DSA:1.10.10.10 2 89 1.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 Pfam PF03466 LysR substrate binding domain 94 280 3.2E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 SUPERFAMILY SSF46785 8 92 1.36E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16320 881cb54407bc38bf43465b02690ce085 298 Gene3D G3DSA:3.40.190.10 182 267 5.6E-11 T 29-03-2018 CKQ55_RS25795 095c9fa8ab88b6a1d96218b2c553c895 67 Pfam PF14001 YdfZ protein 3 65 1.9E-31 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CKQ55_RS25795 095c9fa8ab88b6a1d96218b2c553c895 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 2.9E-34 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CKQ55_RS29680 b0871d577b095e3152e029a7231b842a 680 Pfam PF09972 Predicted membrane protein (DUF2207) 49 606 4.9E-68 T 29-03-2018 IPR018702 Protein of unknown function DUF2207, membrane CKQ55_RS12385 2e57b76bbe4c2b489c5bffff185efbd8 328 Pfam PF13407 Periplasmic binding protein domain 26 285 3.2E-61 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS12385 2e57b76bbe4c2b489c5bffff185efbd8 328 Gene3D G3DSA:3.40.50.2300 143 298 1.4E-18 T 29-03-2018 CKQ55_RS12385 2e57b76bbe4c2b489c5bffff185efbd8 328 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 26 326 1.4E-136 T 29-03-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 CKQ55_RS12385 2e57b76bbe4c2b489c5bffff185efbd8 328 Gene3D G3DSA:3.40.50.2300 22 142 1.5E-20 T 29-03-2018 CKQ55_RS12385 2e57b76bbe4c2b489c5bffff185efbd8 328 SUPERFAMILY SSF53822 23 324 4.71E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS16705 0ff65de2249df6aa0d68184e48068987 127 Pfam PF02152 Dihydroneopterin aldolase 4 113 3.8E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS16705 0ff65de2249df6aa0d68184e48068987 127 SUPERFAMILY SSF55620 1 114 9.64E-38 T 29-03-2018 CKQ55_RS16705 0ff65de2249df6aa0d68184e48068987 127 Gene3D G3DSA:3.30.1130.10 1 122 4.4E-36 T 29-03-2018 CKQ55_RS16705 0ff65de2249df6aa0d68184e48068987 127 SMART SM00905 4 114 4.5E-49 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS16705 0ff65de2249df6aa0d68184e48068987 127 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 2.2E-28 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS16705 0ff65de2249df6aa0d68184e48068987 127 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 2.4E-41 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CKQ55_RS02795 b765c3bc9718db7c44bc1ac8326eb6e5 323 Pfam PF03592 Terminase small subunit 74 270 1.3E-23 T 29-03-2018 IPR005335 Terminase small subunit GO:0006323 CKQ55_RS02795 b765c3bc9718db7c44bc1ac8326eb6e5 323 Gene3D G3DSA:1.20.1580.10 35 299 2.2E-4 T 29-03-2018 CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 PIRSF PIRSF006443 1 166 1.3E-60 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 4.5E-81 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 SMART SM00852 14 158 1.9E-29 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 7.4E-32 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 Gene3D G3DSA:3.40.980.10 3 170 2.6E-35 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 9.1E-38 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CKQ55_RS03285 54140752b5ebc9d34d84b9a931237737 170 SUPERFAMILY SSF53218 8 167 2.49E-45 T 29-03-2018 IPR001453 MoaB/Mog domain CKQ55_RS06115 9b0a0a914dc53dbaedbf9551d7641005 423 ProSitePatterns PS01219 Ammonium transporters signature. 177 202 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CKQ55_RS06115 9b0a0a914dc53dbaedbf9551d7641005 423 Pfam PF00909 Ammonium Transporter Family 28 421 1.3E-126 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CKQ55_RS06115 9b0a0a914dc53dbaedbf9551d7641005 423 SUPERFAMILY SSF111352 22 402 1.7E-126 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CKQ55_RS06115 9b0a0a914dc53dbaedbf9551d7641005 423 Gene3D G3DSA:1.10.3430.10 18 402 5.6E-131 T 29-03-2018 CKQ55_RS06115 9b0a0a914dc53dbaedbf9551d7641005 423 TIGRFAM TIGR00836 amt: ammonium transporter 26 421 7.8E-137 T 29-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CKQ55_RS17885 a5654312106a06470f41d1dbb6202b7d 153 Pfam PF05232 Chlorhexidine efflux transporter 9 71 1.7E-23 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter CKQ55_RS17885 a5654312106a06470f41d1dbb6202b7d 153 Pfam PF05232 Chlorhexidine efflux transporter 77 140 2.9E-20 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter CKQ55_RS21485 350faafc195547d0c89e4f248be921c8 542 SUPERFAMILY SSF103088 387 513 6.54E-33 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS21485 350faafc195547d0c89e4f248be921c8 542 PRINTS PR01021 OMPA domain signature 443 458 6.4E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS21485 350faafc195547d0c89e4f248be921c8 542 PRINTS PR01021 OMPA domain signature 413 435 6.4E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS21485 350faafc195547d0c89e4f248be921c8 542 PRINTS PR01021 OMPA domain signature 458 474 6.4E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CKQ55_RS21485 350faafc195547d0c89e4f248be921c8 542 Pfam PF00691 OmpA family 412 508 2.8E-16 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS21485 350faafc195547d0c89e4f248be921c8 542 Gene3D G3DSA:3.30.1330.60 159 524 3.4E-34 T 29-03-2018 IPR006665 OmpA-like domain CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Gene3D G3DSA:1.25.40.10 101 192 4.7E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Gene3D G3DSA:1.25.40.10 233 348 2.2E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Gene3D G3DSA:1.25.40.10 19 100 8.8E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 SUPERFAMILY SSF48452 109 281 4.55E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Pfam PF14559 Tetratricopeptide repeat 191 245 3.7E-6 T 29-03-2018 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 SMART SM00028 69 102 69.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 SMART SM00028 214 247 0.026 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 SMART SM00028 180 213 15.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Gene3D G3DSA:1.25.40.10 193 232 8.1E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.406 T 29-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CKQ55_RS29415 e12678ae25b3014a2b630f137b090e36 389 Pfam PF13432 Tetratricopeptide repeat 113 169 0.012 T 29-03-2018 CKQ55_RS04265 606688dc2602a10853eb9fe1deb88b7a 180 Gene3D G3DSA:2.60.120.10 2 157 5.1E-43 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS04265 606688dc2602a10853eb9fe1deb88b7a 180 Pfam PF03079 ARD/ARD' family 13 165 2.9E-35 T 29-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 CKQ55_RS04265 606688dc2602a10853eb9fe1deb88b7a 180 SUPERFAMILY SSF51182 4 178 2.49E-44 T 29-03-2018 IPR011051 RmlC-like cupin domain CKQ55_RS04265 606688dc2602a10853eb9fe1deb88b7a 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.05 T 29-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 CKQ55_RS30205 eabbf68070b66583e80928a698fc6591 96 Gene3D G3DSA:3.30.460.10 4 96 2.8E-16 T 29-03-2018 CKQ55_RS30205 eabbf68070b66583e80928a698fc6591 96 SUPERFAMILY SSF81301 3 96 6.95E-18 T 29-03-2018 CKQ55_RS30205 eabbf68070b66583e80928a698fc6591 96 Pfam PF01909 Nucleotidyltransferase domain 27 91 1.5E-6 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CKQ55_RS27995 22bf26723c89e2361eaa2fb213901f9f 57 Pfam PF10753 Toxin GhoT_OrtT 4 57 2.5E-23 T 29-03-2018 IPR019689 Toxin GhoT/OrtT CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 Pfam PF02126 Phosphotriesterase family 31 357 6.7E-70 T 29-03-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 34 42 - T 29-03-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 SUPERFAMILY SSF51556 18 58 1.62E-89 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 SUPERFAMILY SSF51556 85 358 1.62E-89 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 PIRSF PIRSF016839 18 74 0.49 T 29-03-2018 CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 PIRSF PIRSF016839 72 359 1.5E-53 T 29-03-2018 CKQ55_RS27045 18e46e48b1f440f862435ccdbdb5385d 359 Gene3D G3DSA:3.20.20.140 17 359 2.9E-67 T 29-03-2018 CKQ55_RS31220 39de69d044972f69f12f1d0cb00630f7 263 Gene3D G3DSA:3.40.30.10 77 263 1.4E-34 T 29-03-2018 CKQ55_RS31220 39de69d044972f69f12f1d0cb00630f7 263 Pfam PF13462 Thioredoxin 86 227 2.2E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS31220 39de69d044972f69f12f1d0cb00630f7 263 SUPERFAMILY SSF52833 76 254 4.62E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS31385 f83773467aeadfe523bf454a8a5f034f 509 Pfam PF04986 Putative transposase 179 403 8.4E-47 T 29-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CKQ55_RS31385 f83773467aeadfe523bf454a8a5f034f 509 Pfam PF14319 Transposase zinc-binding domain 52 149 8.0E-22 T 29-03-2018 IPR026889 Transposase zinc-binding domain CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 SUPERFAMILY SSF53067 2 246 5.09E-78 T 29-03-2018 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 TIGRFAM TIGR01312 XylB: xylulokinase 3 478 2.8E-198 T 29-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 PIRSF PIRSF000538 1 487 1.0E-138 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 3.5E-76 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 SUPERFAMILY SSF53067 245 478 1.48E-60 T 29-03-2018 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 Gene3D G3DSA:3.30.420.40 1 240 3.0E-80 T 29-03-2018 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 439 1.3E-36 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 Gene3D G3DSA:3.30.420.40 241 487 1.9E-59 T 29-03-2018 CKQ55_RS22150 a7b46df77fd86882b6983174453443c7 487 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CKQ55_RS13470 35fd983994f3453f425656910dcfbe7e 201 SUPERFAMILY SSF52540 4 172 4.1E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS13470 35fd983994f3453f425656910dcfbe7e 201 Pfam PF01202 Shikimate kinase 11 171 1.1E-14 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CKQ55_RS13470 35fd983994f3453f425656910dcfbe7e 201 Gene3D G3DSA:3.40.50.300 2 191 2.9E-17 T 29-03-2018 CKQ55_RS31245 74f7367b299ce4e06c6420ddd49f865b 287 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 11 285 6.8E-179 T 29-03-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type CKQ55_RS31245 74f7367b299ce4e06c6420ddd49f865b 287 Pfam PF02387 IncFII RepA protein family 13 251 4.6E-34 T 29-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 SUPERFAMILY SSF53067 66 111 7.77E-26 T 29-03-2018 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 SUPERFAMILY SSF53067 143 341 7.77E-26 T 29-03-2018 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 SUPERFAMILY SSF53067 5 36 7.77E-26 T 29-03-2018 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 Gene3D G3DSA:3.30.420.40 3 187 5.0E-54 T 29-03-2018 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 Gene3D G3DSA:3.30.420.40 224 374 4.7E-30 T 29-03-2018 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 6.3E-171 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CKQ55_RS25680 06e6e6edf0ad4894c424d7df5a19d2a5 374 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.91 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CKQ55_RS30475 9875ce34e5bbd466fad7664bb1aa8fe3 208 Pfam PF10881 Protein of unknown function (DUF2726) 65 186 1.4E-24 T 29-03-2018 IPR024402 Domain of unknown function DUF2726 CKQ55_RS16700 98f8ca30d8fe923a38bbb56ffb1e24f1 206 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.438 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CKQ55_RS16700 98f8ca30d8fe923a38bbb56ffb1e24f1 206 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 3.1E-81 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CKQ55_RS16700 98f8ca30d8fe923a38bbb56ffb1e24f1 206 SMART SM01207 10 185 2.3E-85 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CKQ55_RS16700 98f8ca30d8fe923a38bbb56ffb1e24f1 206 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.2E-49 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CKQ55_RS14020 d664116b94441e511b5eab00c966eeba 330 Gene3D G3DSA:3.40.50.2300 131 329 6.0E-36 T 29-03-2018 CKQ55_RS14020 d664116b94441e511b5eab00c966eeba 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 2.5E-165 T 29-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 CKQ55_RS14020 d664116b94441e511b5eab00c966eeba 330 SUPERFAMILY SSF53822 24 318 4.35E-72 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS14020 d664116b94441e511b5eab00c966eeba 330 Pfam PF13407 Periplasmic binding protein domain 38 282 1.6E-62 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS14020 d664116b94441e511b5eab00c966eeba 330 Gene3D G3DSA:3.40.50.2300 26 130 2.3E-19 T 29-03-2018 CKQ55_RS02945 4aa9719a8739710d566fa48473a05e22 71 Pfam PF06806 Putative excisionase (DUF1233) 6 69 3.2E-14 T 29-03-2018 IPR009634 Bacteriophage 933W, Xis excisionase CKQ55_RS31695 5bbb65ab5a6f35ac9d392682cc008ba4 273 Pfam PF10263 SprT-like family 13 116 1.4E-11 T 29-03-2018 IPR006640 SprT-like CKQ55_RS07885 7a10d1004cb4949bce2f1759e0d1c052 183 Gene3D G3DSA:2.60.40.1090 16 183 7.0E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07885 7a10d1004cb4949bce2f1759e0d1c052 183 Pfam PF00419 Fimbrial protein 19 183 4.2E-9 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS07885 7a10d1004cb4949bce2f1759e0d1c052 183 SUPERFAMILY SSF49401 17 183 5.47E-17 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS03780 f2e09a2214ad1a502206c4cb119c38d3 241 Pfam PF06149 Protein of unknown function (DUF969) 7 225 2.6E-89 T 29-03-2018 IPR010374 Protein of unknown function DUF969 CKQ55_RS06055 4b327f0047cc3ecfb143c3a5f760704a 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 2.0E-21 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CKQ55_RS23950 43e9e55a203b6aa23843c7527a7106ce 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 1.4E-146 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS23950 43e9e55a203b6aa23843c7527a7106ce 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 7.2E-112 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS06710 7c73f88ec6bd5a1ab89b3149a5d6ed5e 310 Pfam PF02574 Homocysteine S-methyltransferase 18 307 4.0E-82 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CKQ55_RS06710 7c73f88ec6bd5a1ab89b3149a5d6ed5e 310 Gene3D G3DSA:3.20.20.330 1 309 1.4E-104 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CKQ55_RS06710 7c73f88ec6bd5a1ab89b3149a5d6ed5e 310 PIRSF PIRSF037505 6 175 9.2E-8 T 29-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CKQ55_RS06710 7c73f88ec6bd5a1ab89b3149a5d6ed5e 310 PIRSF PIRSF037505 272 309 29.0 T 29-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 CKQ55_RS06710 7c73f88ec6bd5a1ab89b3149a5d6ed5e 310 SUPERFAMILY SSF82282 7 308 5.89E-85 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CKQ55_RS22640 1ec70ede7db2d669f37fe300df564fbf 373 SUPERFAMILY SSF53756 5 310 1.26E-20 T 29-03-2018 CKQ55_RS22640 1ec70ede7db2d669f37fe300df564fbf 373 Pfam PF00534 Glycosyl transferases group 1 198 278 1.5E-7 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS22640 1ec70ede7db2d669f37fe300df564fbf 373 Gene3D G3DSA:3.40.50.2000 177 325 1.8E-14 T 29-03-2018 CKQ55_RS01205 af680110a37c0078dc5db64e5f99872d 358 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 334 3.9E-85 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CKQ55_RS17775 b9014e7e4c4e7417480aba020bda8c55 645 Pfam PF04632 Fusaric acid resistance protein family 19 629 1.4E-66 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CKQ55_RS05310 9f24d4f2ae28e2cbcd1ddd06d571d9c9 319 Pfam PF10554 Ash protein family 104 202 9.6E-29 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Gene3D G3DSA:3.40.630.30 350 521 1.5E-16 T 29-03-2018 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 SUPERFAMILY SSF52540 171 280 1.67E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Pfam PF17176 tRNA-binding domain 534 650 1.2E-36 T 29-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Pfam PF13718 GNAT acetyltransferase 2 366 474 2.1E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Pfam PF13718 GNAT acetyltransferase 2 480 530 5.4E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 15 648 47.134 T 29-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 SUPERFAMILY SSF55729 451 510 2.57E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 SUPERFAMILY SSF55729 369 415 2.57E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Gene3D G3DSA:3.40.50.300 167 305 0.0044 T 29-03-2018 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Pfam PF08351 Domain of unknown function (DUF1726) 63 142 2.8E-5 T 29-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CKQ55_RS20405 e2477edf66573b3509b0c29f8719fb97 666 Pfam PF05127 Helicase 194 334 5.6E-38 T 29-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 163 46.779 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 SUPERFAMILY SSF46785 2 133 9.1E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 Pfam PF02082 Transcriptional regulator 1 83 5.4E-27 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.8E-46 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 Gene3D G3DSA:1.10.10.10 1 139 1.3E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CKQ55_RS20115 43cadcbabb1a3c0ea5d7a902998877e0 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.8E-66 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CKQ55_RS16230 3e6f9b865c37c6d7b19a2979391e8d3b 94 Gene3D G3DSA:3.40.50.2300 2 94 7.2E-19 T 29-03-2018 CKQ55_RS16230 3e6f9b865c37c6d7b19a2979391e8d3b 94 SUPERFAMILY SSF52794 3 92 3.4E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS16230 3e6f9b865c37c6d7b19a2979391e8d3b 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 86 1.1E-10 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS30650 93c1ecfe63982d3585416164a8ff54e1 122 Pfam PF05513 TraA 1 120 1.5E-64 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CKQ55_RS30650 93c1ecfe63982d3585416164a8ff54e1 122 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 26 122 1.7E-32 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 Gene3D G3DSA:3.40.190.10 201 335 2.3E-19 T 29-03-2018 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 SUPERFAMILY SSF53850 29 369 2.99E-106 T 29-03-2018 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PIRSF PIRSF019574 1 370 6.3E-144 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 1.1E-32 T 29-03-2018 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 3.0E-73 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CKQ55_RS02410 59e5f780e51e1f5382f9e6895589b4f4 370 Gene3D G3DSA:3.40.190.10 23 200 3.1E-34 T 29-03-2018 CKQ55_RS14150 1ee4b8427da519b89ef7342005c237c1 562 Pfam PF08019 Domain of unknown function (DUF1705) 56 170 2.6E-18 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CKQ55_RS14150 1ee4b8427da519b89ef7342005c237c1 562 Pfam PF00884 Sulfatase 250 538 2.0E-47 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CKQ55_RS14150 1ee4b8427da519b89ef7342005c237c1 562 SUPERFAMILY SSF53649 250 542 6.54E-19 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CKQ55_RS14150 1ee4b8427da519b89ef7342005c237c1 562 Gene3D G3DSA:3.40.720.10 246 544 3.2E-19 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CKQ55_RS01450 499de38c02b52c88866eb21fd67b38c5 342 Gene3D G3DSA:3.20.20.30 1 338 1.2E-59 T 29-03-2018 CKQ55_RS01450 499de38c02b52c88866eb21fd67b38c5 342 SUPERFAMILY SSF51679 7 333 1.13E-57 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS01450 499de38c02b52c88866eb21fd67b38c5 342 Pfam PF00296 Luciferase-like monooxygenase 8 250 4.9E-27 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 404 2.7E-140 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 40.296 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 Gene3D G3DSA:2.30.40.10 7 81 1.5E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 Pfam PF01979 Amidohydrolase family 64 383 1.8E-13 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 Gene3D G3DSA:3.20.20.140 82 365 7.9E-55 T 29-03-2018 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 SUPERFAMILY SSF51556 66 365 1.11E-80 T 29-03-2018 IPR032466 Metal-dependent hydrolase CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 SUPERFAMILY SSF51338 367 404 8.65E-29 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS03385 7b09e384060d8b812361f0c54ccc2ad8 405 SUPERFAMILY SSF51338 8 66 8.65E-29 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CKQ55_RS26060 c78c0d7fa31ca14337dc7d299dc79a6b 206 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 6 198 1.1E-47 T 29-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CKQ55_RS26060 c78c0d7fa31ca14337dc7d299dc79a6b 206 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 4 205 33.022 T 29-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CKQ55_RS26060 c78c0d7fa31ca14337dc7d299dc79a6b 206 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 6 199 1.7E-52 T 29-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CKQ55_RS25315 656df52af854602c5c68d9f66fd45609 362 Gene3D G3DSA:3.40.190.10 5 175 9.3E-19 T 29-03-2018 CKQ55_RS25315 656df52af854602c5c68d9f66fd45609 362 SUPERFAMILY SSF53850 44 342 1.59E-52 T 29-03-2018 CKQ55_RS25315 656df52af854602c5c68d9f66fd45609 362 Pfam PF13416 Bacterial extracellular solute-binding protein 59 314 3.2E-20 T 29-03-2018 CKQ55_RS25315 656df52af854602c5c68d9f66fd45609 362 Gene3D G3DSA:3.40.190.10 176 318 2.0E-10 T 29-03-2018 CKQ55_RS07640 e3b9767fc0e9f2d197c1a4445f3b1251 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 4.6E-55 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CKQ55_RS07640 e3b9767fc0e9f2d197c1a4445f3b1251 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.65 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CKQ55_RS07640 e3b9767fc0e9f2d197c1a4445f3b1251 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 4.0E-66 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CKQ55_RS03365 f46319b1c39ead56dbc96a38a7e11dd1 460 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS03365 f46319b1c39ead56dbc96a38a7e11dd1 460 PIRSF PIRSF006060 1 457 5.4E-69 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS03365 f46319b1c39ead56dbc96a38a7e11dd1 460 Pfam PF00324 Amino acid permease 17 451 8.9E-98 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS04785 a19c7a07d44351f74da027fb1bac8575 280 Pfam PF01478 Type IV leader peptidase family 137 245 1.8E-26 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CKQ55_RS04785 a19c7a07d44351f74da027fb1bac8575 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 146 163 2.1E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS04785 a19c7a07d44351f74da027fb1bac8575 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 203 213 2.1E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS04785 a19c7a07d44351f74da027fb1bac8575 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 214 225 2.1E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS04785 a19c7a07d44351f74da027fb1bac8575 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 226 241 2.1E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CKQ55_RS04785 a19c7a07d44351f74da027fb1bac8575 280 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 125 1.7E-29 T 29-03-2018 IPR010627 Peptidase A24A, N-terminal CKQ55_RS25570 da0393ec4a18e29217abbc0c8ba83bad 382 SUPERFAMILY SSF53335 117 373 4.96E-81 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS25570 da0393ec4a18e29217abbc0c8ba83bad 382 Gene3D G3DSA:3.40.50.150 105 372 2.3E-66 T 29-03-2018 CKQ55_RS25570 da0393ec4a18e29217abbc0c8ba83bad 382 PIRSF PIRSF003085 2 381 7.3E-129 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CKQ55_RS25570 da0393ec4a18e29217abbc0c8ba83bad 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.2E-103 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 Gene3D G3DSA:3.40.50.1000 78 197 5.2E-21 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 SUPERFAMILY SSF56784 3 192 2.71E-43 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 184 2.5E-17 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 7.8E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 7.8E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 7.8E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 7.8E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 61 184 4.9E-11 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS12705 d1302fb993d59c6daf507109fa715a8b 199 Gene3D G3DSA:1.10.150.240 18 77 4.8E-20 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CKQ55_RS22985 fbcf42c843082d787314f2575c381950 242 SUPERFAMILY SSF55681 26 238 4.31E-38 T 29-03-2018 CKQ55_RS22985 fbcf42c843082d787314f2575c381950 242 Gene3D G3DSA:3.30.930.10 19 242 4.3E-24 T 29-03-2018 CKQ55_RS20520 5bc23e91f5b8a0a6a36dd201d1145ecd 453 Gene3D G3DSA:2.30.170.30 1 53 2.7E-26 T 29-03-2018 CKQ55_RS20520 5bc23e91f5b8a0a6a36dd201d1145ecd 453 Gene3D G3DSA:1.10.220.70 56 140 1.1E-31 T 29-03-2018 CKQ55_RS20520 5bc23e91f5b8a0a6a36dd201d1145ecd 453 Gene3D G3DSA:3.20.20.70 143 449 2.2E-153 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS20520 5bc23e91f5b8a0a6a36dd201d1145ecd 453 PIRSF PIRSF018788 1 453 8.7E-235 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS20520 5bc23e91f5b8a0a6a36dd201d1145ecd 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 3.3E-204 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CKQ55_RS04910 07d6ed9a45adf396560bca07c211a1d7 475 Pfam PF07690 Major Facilitator Superfamily 17 419 2.0E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS04910 07d6ed9a45adf396560bca07c211a1d7 475 Gene3D G3DSA:1.20.1250.20 264 470 1.2E-13 T 29-03-2018 CKQ55_RS04910 07d6ed9a45adf396560bca07c211a1d7 475 SUPERFAMILY SSF103473 11 199 7.85E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS04910 07d6ed9a45adf396560bca07c211a1d7 475 SUPERFAMILY SSF103473 253 463 7.85E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS04910 07d6ed9a45adf396560bca07c211a1d7 475 Gene3D G3DSA:1.20.1250.20 9 204 6.4E-26 T 29-03-2018 CKQ55_RS30045 6bcd0ecd02add31f2784832d7edc88aa 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS30045 6bcd0ecd02add31f2784832d7edc88aa 255 Pfam PF00005 ABC transporter 19 166 2.2E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS30045 6bcd0ecd02add31f2784832d7edc88aa 255 SUPERFAMILY SSF52540 11 220 1.0E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS30045 6bcd0ecd02add31f2784832d7edc88aa 255 SMART SM00382 27 214 8.5E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS30045 6bcd0ecd02add31f2784832d7edc88aa 255 Gene3D G3DSA:3.40.50.300 2 245 2.4E-62 T 29-03-2018 CKQ55_RS09385 4157d4f8998f64eaa5b689725514260e 31 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 9 30 5.0E-11 T 29-03-2018 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 CKQ55_RS23855 a9af929b6cf07f2e5b99a65233d8b97b 877 Pfam PF02470 MlaD protein 46 137 1.5E-14 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS23855 a9af929b6cf07f2e5b99a65233d8b97b 877 Pfam PF02470 MlaD protein 747 810 3.8E-8 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS23855 a9af929b6cf07f2e5b99a65233d8b97b 877 Pfam PF02470 MlaD protein 280 348 9.7E-7 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS23855 a9af929b6cf07f2e5b99a65233d8b97b 877 Pfam PF02470 MlaD protein 636 724 3.1E-9 T 29-03-2018 IPR003399 Mce/MlaD CKQ55_RS14145 8d12b292531e73dfc4176e756bbb6ae3 400 Gene3D G3DSA:1.20.1250.20 4 199 1.1E-18 T 29-03-2018 CKQ55_RS14145 8d12b292531e73dfc4176e756bbb6ae3 400 Pfam PF07690 Major Facilitator Superfamily 23 230 9.1E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS14145 8d12b292531e73dfc4176e756bbb6ae3 400 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 1.1E-133 T 29-03-2018 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS14145 8d12b292531e73dfc4176e756bbb6ae3 400 Gene3D G3DSA:1.20.1250.20 206 399 1.4E-20 T 29-03-2018 CKQ55_RS14145 8d12b292531e73dfc4176e756bbb6ae3 400 SUPERFAMILY SSF103473 6 388 9.55E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS15030 19144be37282e6bed940e5661e781df8 263 Gene3D G3DSA:3.30.420.40 4 158 2.1E-9 T 29-03-2018 CKQ55_RS15030 19144be37282e6bed940e5661e781df8 263 SUPERFAMILY SSF53067 43 164 2.07E-5 T 29-03-2018 CKQ55_RS06745 8fc3964076d43d9865c831259e83dbab 299 Gene3D G3DSA:1.10.3470.10 3 286 3.4E-51 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS06745 8fc3964076d43d9865c831259e83dbab 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 2.4E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS15235 78d7eccd507b6fc30b4efd49a5e097a5 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.061 T 29-03-2018 IPR007236 SlyX CKQ55_RS15235 78d7eccd507b6fc30b4efd49a5e097a5 72 Pfam PF04102 SlyX 6 72 1.5E-23 T 29-03-2018 IPR007236 SlyX CKQ55_RS15235 78d7eccd507b6fc30b4efd49a5e097a5 72 Gene3D G3DSA:1.20.5.300 4 50 3.3E-17 T 29-03-2018 CKQ55_RS17610 2978dc697a0c813b64739dfbd27626ab 349 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 57 216 1.4E-8 T 29-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 CKQ55_RS17610 2978dc697a0c813b64739dfbd27626ab 349 SUPERFAMILY SSF53474 45 185 8.43E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS17610 2978dc697a0c813b64739dfbd27626ab 349 SUPERFAMILY SSF53474 237 348 8.43E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS17610 2978dc697a0c813b64739dfbd27626ab 349 Gene3D G3DSA:3.40.50.1820 37 349 1.1E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS11985 adb27a5764e38cd8078793d9cb4d9aad 348 Gene3D G3DSA:3.30.1890.10 44 202 8.6E-54 T 29-03-2018 CKQ55_RS11985 adb27a5764e38cd8078793d9cb4d9aad 348 SUPERFAMILY SSF160355 54 318 4.84E-82 T 29-03-2018 CKQ55_RS11985 adb27a5764e38cd8078793d9cb4d9aad 348 Pfam PF02706 Chain length determinant protein 15 81 4.2E-13 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CKQ55_RS11985 adb27a5764e38cd8078793d9cb4d9aad 348 Gene3D G3DSA:1.10.287.210 203 294 1.4E-19 T 29-03-2018 CKQ55_RS11985 adb27a5764e38cd8078793d9cb4d9aad 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 56.832 T 29-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 CKQ55_RS26080 390d0b3a0958c0615c108ef64967f258 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 40.468 T 29-03-2018 IPR009662 Malonate decarboxylase delta subunit CKQ55_RS26080 390d0b3a0958c0615c108ef64967f258 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 95 1.4E-20 T 29-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CKQ55_RS26080 390d0b3a0958c0615c108ef64967f258 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 1.7E-29 T 29-03-2018 IPR009662 Malonate decarboxylase delta subunit CKQ55_RS26080 390d0b3a0958c0615c108ef64967f258 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 3.0E-43 T 29-03-2018 IPR009662 Malonate decarboxylase delta subunit CKQ55_RS09840 c62e8eaccef4fe5dc7ad218050bc23b5 322 Pfam PF01548 Transposase 9 155 1.9E-21 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CKQ55_RS09840 c62e8eaccef4fe5dc7ad218050bc23b5 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 278 2.4E-21 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CKQ55_RS23945 48221b8206b4d4777a83dfae20c074f8 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 1.0E-60 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CKQ55_RS23945 48221b8206b4d4777a83dfae20c074f8 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 30.58 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CKQ55_RS23945 48221b8206b4d4777a83dfae20c074f8 152 PIRSF PIRSF020687 1 152 1.1E-64 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CKQ55_RS23945 48221b8206b4d4777a83dfae20c074f8 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 20 148 4.0E-52 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CKQ55_RS16325 5e932c7c0cd32928f54c2a9fc75d3dc3 122 Pfam PF05656 Protein of unknown function (DUF805) 11 117 6.6E-35 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CKQ55_RS14470 1a207154a70e4f09b49cb01a66655822 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 5.9E-54 T 29-03-2018 IPR019598 Universal stress protein B CKQ55_RS14470 1a207154a70e4f09b49cb01a66655822 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.183 T 29-03-2018 IPR019598 Universal stress protein B CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 SUPERFAMILY SSF49354 21 140 3.66E-18 T 29-03-2018 IPR008962 PapD-like CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 Gene3D G3DSA:2.60.40.10 143 226 9.0E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 141 1.1E-18 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 SUPERFAMILY SSF49584 145 225 5.36E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 PRINTS PR00969 Pili chaperone signature 123 138 5.9E-9 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 PRINTS PR00969 Pili chaperone signature 72 93 5.9E-9 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 PRINTS PR00969 Pili chaperone signature 157 172 5.9E-9 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CKQ55_RS17995 8b8c590e3ce4206beb3ebd26f76edccc 233 Gene3D G3DSA:2.60.40.10 31 139 2.2E-17 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 Gene3D G3DSA:3.40.190.10 159 301 2.2E-31 T 29-03-2018 CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 SUPERFAMILY SSF53850 28 533 4.34E-111 T 29-03-2018 CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 PIRSF PIRSF002741 4 536 8.5E-74 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 Gene3D G3DSA:3.90.76.10 47 158 1.6E-26 T 29-03-2018 CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 Gene3D G3DSA:3.10.105.10 302 504 5.3E-37 T 29-03-2018 CKQ55_RS22170 d33aca4725a3a8cd5232fa8098d5927b 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 443 1.0E-79 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CKQ55_RS19725 e32de902c400f93e8977e76cd2d4af00 263 Pfam PF01578 Cytochrome C assembly protein 36 262 1.3E-44 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CKQ55_RS15290 62051a391e86bd6ed1733e36fe0e2164 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 4.2E-15 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CKQ55_RS22365 95a4f061cb121c679ab7e1e683a6d947 372 Gene3D G3DSA:3.90.1580.10 85 305 1.4E-4 T 29-03-2018 CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 Pfam PF01614 Bacterial transcriptional regulator 130 243 2.7E-24 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 SUPERFAMILY SSF46785 14 82 2.89E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 Gene3D G3DSA:3.30.450.40 78 250 9.0E-42 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 SMART SM00346 11 99 1.3E-14 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 Gene3D G3DSA:1.10.10.10 3 77 2.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 SUPERFAMILY SSF55781 75 248 2.06E-40 T 29-03-2018 IPR029016 GAF domain-like CKQ55_RS06265 ebd05f25d49f45af9c7f2d149205bcb0 252 Pfam PF09339 IclR helix-turn-helix domain 14 64 3.1E-8 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CKQ55_RS26905 244ac59b737a1e70a10b5e64ec27247f 297 Gene3D G3DSA:3.40.50.720 7 173 6.3E-22 T 29-03-2018 CKQ55_RS26905 244ac59b737a1e70a10b5e64ec27247f 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 171 291 4.0E-17 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CKQ55_RS26905 244ac59b737a1e70a10b5e64ec27247f 297 Gene3D G3DSA:1.10.1040.10 174 295 3.8E-19 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS26905 244ac59b737a1e70a10b5e64ec27247f 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 149 2.7E-24 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CKQ55_RS26905 244ac59b737a1e70a10b5e64ec27247f 297 SUPERFAMILY SSF48179 171 291 8.16E-21 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS26905 244ac59b737a1e70a10b5e64ec27247f 297 SUPERFAMILY SSF51735 7 126 3.32E-9 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS15130 5917362e6feae7a8455dc4a5e0c5410d 55 ProDom PD026929 YHFG 1 55 1.0E-18 T 29-03-2018 IPR022541 Protein of unknown function DUF2559 CKQ55_RS15130 5917362e6feae7a8455dc4a5e0c5410d 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 1.4E-30 T 29-03-2018 IPR022541 Protein of unknown function DUF2559 CKQ55_RS23530 eaae363acf556874de5c9a486e6edc8f 165 Gene3D G3DSA:1.20.1260.10 1 161 5.2E-41 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS23530 eaae363acf556874de5c9a486e6edc8f 165 Pfam PF00210 Ferritin-like domain 7 142 1.7E-34 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CKQ55_RS23530 eaae363acf556874de5c9a486e6edc8f 165 SUPERFAMILY SSF47240 4 160 1.42E-54 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS21785 32083ee487226072db6f5a67cb763e6c 332 Pfam PF13407 Periplasmic binding protein domain 28 300 4.3E-64 T 29-03-2018 IPR025997 Periplasmic binding protein CKQ55_RS21785 32083ee487226072db6f5a67cb763e6c 332 SUPERFAMILY SSF53822 25 329 1.14E-84 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CKQ55_RS21785 32083ee487226072db6f5a67cb763e6c 332 Gene3D G3DSA:3.40.50.2300 26 136 9.8E-16 T 29-03-2018 CKQ55_RS21785 32083ee487226072db6f5a67cb763e6c 332 Gene3D G3DSA:3.40.50.2300 137 332 4.3E-41 T 29-03-2018 CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 SMART SM00342 207 290 4.8E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 Pfam PF12833 Helix-turn-helix domain 213 288 7.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 SUPERFAMILY SSF46689 191 241 1.57E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 SUPERFAMILY SSF46689 243 292 1.66E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 Gene3D G3DSA:1.10.10.60 248 297 2.8E-13 T 29-03-2018 CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 178 2.3E-38 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CKQ55_RS16895 2d084c29447e8d154556ef5aa332c938 299 Gene3D G3DSA:1.10.10.60 27 247 2.4E-14 T 29-03-2018 CKQ55_RS11885 253271f7017dc9b95189d7b677fe1cc9 527 Pfam PF07690 Major Facilitator Superfamily 16 426 2.1E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS11885 253271f7017dc9b95189d7b677fe1cc9 527 Gene3D G3DSA:1.20.1250.20 272 526 2.2E-11 T 29-03-2018 CKQ55_RS11885 253271f7017dc9b95189d7b677fe1cc9 527 SUPERFAMILY SSF103473 261 433 8.11E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS11885 253271f7017dc9b95189d7b677fe1cc9 527 SUPERFAMILY SSF103473 5 195 8.11E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS11885 253271f7017dc9b95189d7b677fe1cc9 527 Gene3D G3DSA:1.20.1250.20 6 198 4.1E-24 T 29-03-2018 CKQ55_RS27270 c608ed79af1aaa69ac3dfded653581e9 251 Gene3D G3DSA:1.20.1250.20 113 235 0.028 T 29-03-2018 CKQ55_RS27270 c608ed79af1aaa69ac3dfded653581e9 251 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 3 235 1.1E-69 T 29-03-2018 IPR012666 Cobalt transporter subunit CbtA, putative CKQ55_RS27270 c608ed79af1aaa69ac3dfded653581e9 251 Gene3D G3DSA:1.20.1250.20 3 112 1.2E-4 T 29-03-2018 CKQ55_RS18715 7ef1368bab78d1fcf52335fe661bfaac 105 Gene3D G3DSA:1.20.5.1000 27 104 2.1E-4 T 29-03-2018 CKQ55_RS18715 7ef1368bab78d1fcf52335fe661bfaac 105 Pfam PF04977 Septum formation initiator 11 89 1.5E-30 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CKQ55_RS18715 7ef1368bab78d1fcf52335fe661bfaac 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.026 T 29-03-2018 IPR023081 Cell division protein FtsB CKQ55_RS17445 0d641376da2bf56852031045f4500919 136 PIRSF PIRSF020653 1 136 2.8E-65 T 29-03-2018 IPR009883 Inner membrane protein YgfX CKQ55_RS17445 0d641376da2bf56852031045f4500919 136 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 7.0E-43 T 29-03-2018 IPR009883 Inner membrane protein YgfX CKQ55_RS17445 0d641376da2bf56852031045f4500919 136 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 1.6E-54 T 29-03-2018 IPR009883 Inner membrane protein YgfX CKQ55_RS04475 c272d5b02c0cf9a9ee2cfcf281d0a9ad 67 Pfam PF03621 MbtH-like protein 4 53 8.3E-19 T 29-03-2018 IPR005153 MbtH-like protein CKQ55_RS04475 c272d5b02c0cf9a9ee2cfcf281d0a9ad 67 Gene3D G3DSA:3.90.820.10 4 63 4.5E-22 T 29-03-2018 CKQ55_RS04475 c272d5b02c0cf9a9ee2cfcf281d0a9ad 67 SMART SM00923 5 55 2.7E-20 T 29-03-2018 IPR005153 MbtH-like protein CKQ55_RS04475 c272d5b02c0cf9a9ee2cfcf281d0a9ad 67 SUPERFAMILY SSF160582 3 65 4.32E-22 T 29-03-2018 CKQ55_RS30635 cfc8b999145d2135868edd3a5d6a276b 244 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 15 237 1.0E-60 T 29-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK CKQ55_RS30635 cfc8b999145d2135868edd3a5d6a276b 244 Pfam PF06586 TraK protein 19 236 1.7E-50 T 29-03-2018 IPR010563 Pilus assembly TraK CKQ55_RS07975 a9960ab5b7067bae052ae1603bf6ee46 317 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 314 2.0E-115 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CKQ55_RS07975 a9960ab5b7067bae052ae1603bf6ee46 317 Pfam PF03812 2-keto-3-deoxygluconate permease 3 306 2.6E-122 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CKQ55_RS07975 a9960ab5b7067bae052ae1603bf6ee46 317 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 312 32.521 T 29-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CKQ55_RS26670 8c8aa6ea8bad28a64e29e3670247e82e 91 Gene3D G3DSA:1.10.720.30 12 68 5.0E-31 T 29-03-2018 IPR003034 SAP domain CKQ55_RS26670 8c8aa6ea8bad28a64e29e3670247e82e 91 Pfam PF09905 DNA-binding protein VF530 4 66 4.8E-34 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 PIRSF PIRSF000371 1 299 8.9E-97 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 2.7E-10 T 29-03-2018 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 SUPERFAMILY SSF102114 101 265 1.43E-16 T 29-03-2018 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 291 4.3E-107 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 Pfam PF04055 Radical SAM superfamily 19 229 5.8E-31 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CKQ55_RS03020 77b51b7f535df79b7a8ed057cac12665 299 Gene3D G3DSA:3.20.20.70 4 298 1.0E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS19210 bf75e817e32066994e93bda6fa5309c1 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 6 171 3.6E-76 T 29-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CKQ55_RS19210 bf75e817e32066994e93bda6fa5309c1 187 PIRSF PIRSF038321 2 182 4.0E-88 T 29-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CKQ55_RS19210 bf75e817e32066994e93bda6fa5309c1 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 1.3E-110 T 29-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CKQ55_RS06800 3d26f6819159074ea402ac7517ebf54b 841 Pfam PF16967 E-set like domain 283 350 3.5E-25 T 29-03-2018 IPR032636 Pilus assembly protein, E-set like domain CKQ55_RS06800 3d26f6819159074ea402ac7517ebf54b 841 Pfam PF15976 CS1-pili formation C-terminal 732 824 5.4E-28 T 29-03-2018 IPR031917 Pilus assembly protein, C-terminal domain CKQ55_RS06800 3d26f6819159074ea402ac7517ebf54b 841 SUPERFAMILY SSF49464 749 802 9.81E-5 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain CKQ55_RS07645 f0e54dde0ac1db35fbb146a4e5f50d1f 992 Pfam PF03272 Putative mucin or carbohydrate-binding module 875 989 2.7E-17 T 29-03-2018 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 CKQ55_RS07645 f0e54dde0ac1db35fbb146a4e5f50d1f 992 Pfam PF03272 Putative mucin or carbohydrate-binding module 730 843 2.1E-15 T 29-03-2018 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 CKQ55_RS07645 f0e54dde0ac1db35fbb146a4e5f50d1f 992 Pfam PF03272 Putative mucin or carbohydrate-binding module 535 646 3.9E-17 T 29-03-2018 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 CKQ55_RS07645 f0e54dde0ac1db35fbb146a4e5f50d1f 992 SMART SM01276 29 330 6.2E-9 T 29-03-2018 IPR031161 Peptidase family M60 domain CKQ55_RS07645 f0e54dde0ac1db35fbb146a4e5f50d1f 992 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 114 378 2.9E-12 T 29-03-2018 IPR031161 Peptidase family M60 domain CKQ55_RS30795 362126cb33ddaf6bbfe44c1ad4338a8a 47 Pfam PF07339 Protein of unknown function (DUF1472) 23 47 2.9E-6 T 29-03-2018 IPR009940 Protein of unknown function DUF1472 CKQ55_RS04245 15adeefeae6f0ba02d137960e747f68d 407 Gene3D G3DSA:3.40.50.620 9 237 1.5E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS04245 15adeefeae6f0ba02d137960e747f68d 407 Pfam PF11922 Domain of unknown function (DUF3440) 237 339 1.6E-28 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 CKQ55_RS04245 15adeefeae6f0ba02d137960e747f68d 407 Pfam PF11922 Domain of unknown function (DUF3440) 352 386 2.6E-8 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 CKQ55_RS04245 15adeefeae6f0ba02d137960e747f68d 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 1.5E-15 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CKQ55_RS04245 15adeefeae6f0ba02d137960e747f68d 407 SUPERFAMILY SSF52402 12 232 1.2E-41 T 29-03-2018 CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 SUPERFAMILY SSF50891 100 226 2.35E-34 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 22 223 1.3E-51 T 29-03-2018 IPR010016 KipI family CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 SMART SM00796 16 214 1.6E-78 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 Gene3D G3DSA:3.30.1360.40 2 95 2.5E-9 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 SUPERFAMILY SSF160467 18 104 3.27E-10 T 29-03-2018 CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 17 214 1.1E-57 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CKQ55_RS29170 90d600c6aa39dbd4547cab9fa8aa5b49 229 Gene3D G3DSA:2.40.100.10 98 228 5.1E-37 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS13480 f794280b6f2382f4e20f457926a49740 62 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 1 31 1.3E-11 T 29-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CKQ55_RS13480 f794280b6f2382f4e20f457926a49740 62 Gene3D G3DSA:2.10.260.10 1 59 2.8E-4 T 29-03-2018 CKQ55_RS09325 2ffb98c3b4f9e605486dda1bce4cd0d2 94 Pfam PF00936 BMC domain 4 79 1.2E-28 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09325 2ffb98c3b4f9e605486dda1bce4cd0d2 94 SMART SM00877 3 79 4.9E-36 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS09325 2ffb98c3b4f9e605486dda1bce4cd0d2 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 29-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CKQ55_RS09325 2ffb98c3b4f9e605486dda1bce4cd0d2 94 SUPERFAMILY SSF143414 3 90 4.05E-31 T 29-03-2018 CKQ55_RS09325 2ffb98c3b4f9e605486dda1bce4cd0d2 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 45 3.0E-17 T 29-03-2018 CKQ55_RS26420 116606b4e45ff7f1b46eae6cc6322d6b 397 Gene3D G3DSA:1.20.1250.20 196 390 4.8E-12 T 29-03-2018 CKQ55_RS26420 116606b4e45ff7f1b46eae6cc6322d6b 397 Pfam PF07690 Major Facilitator Superfamily 13 342 3.5E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS26420 116606b4e45ff7f1b46eae6cc6322d6b 397 SUPERFAMILY SSF103473 6 382 2.35E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS26420 116606b4e45ff7f1b46eae6cc6322d6b 397 Gene3D G3DSA:1.20.1250.20 4 195 4.1E-28 T 29-03-2018 CKQ55_RS00225 f80bf91abeba4e5a6f6b9e24714f11d5 134 Pfam PF06222 Phage tail assembly chaperone 3 133 1.5E-44 T 29-03-2018 IPR010411 Bacteriophage tail assembly protein, Gp13/14 CKQ55_RS01780 8492728d18e776ce5035fd83261fe012 430 Gene3D G3DSA:3.40.50.1000 68 399 1.2E-7 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS01780 8492728d18e776ce5035fd83261fe012 430 Pfam PF12710 haloacid dehalogenase-like hydrolase 252 360 2.8E-6 T 29-03-2018 CKQ55_RS01780 8492728d18e776ce5035fd83261fe012 430 SUPERFAMILY SSF56784 250 376 2.78E-27 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS01780 8492728d18e776ce5035fd83261fe012 430 SUPERFAMILY SSF56784 47 107 2.78E-27 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS01780 8492728d18e776ce5035fd83261fe012 430 SUPERFAMILY SSF56784 135 216 2.78E-27 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS04960 2cd65cbafbd31ff31f66c9d49487c56a 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS04960 2cd65cbafbd31ff31f66c9d49487c56a 211 Gene3D G3DSA:1.10.10.10 147 203 9.5E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04960 2cd65cbafbd31ff31f66c9d49487c56a 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 194 7.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CKQ55_RS04960 2cd65cbafbd31ff31f66c9d49487c56a 211 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 8 193 8.0E-24 T 29-03-2018 CKQ55_RS04960 2cd65cbafbd31ff31f66c9d49487c56a 211 SUPERFAMILY SSF46894 140 198 2.35E-8 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 1.5E-148 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 PRINTS PR00171 Sugar transporter signature 26 36 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 PRINTS PR00171 Sugar transporter signature 262 272 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 PRINTS PR00171 Sugar transporter signature 352 373 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 PRINTS PR00171 Sugar transporter signature 375 387 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 PRINTS PR00171 Sugar transporter signature 109 128 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 Pfam PF00083 Sugar (and other) transporter 18 450 1.6E-138 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 SUPERFAMILY SSF103473 13 448 4.45E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 Gene3D G3DSA:1.20.1250.20 3 231 1.2E-36 T 29-03-2018 CKQ55_RS17180 c8dc6768a3a467f619475775a3f58cd3 464 Gene3D G3DSA:1.20.1250.20 232 463 4.3E-41 T 29-03-2018 CKQ55_RS00280 75f28d68da7388bab38a441fb1a973c4 154 Pfam PF05119 Phage terminase, small subunit 46 142 2.0E-24 T 29-03-2018 IPR006448 Putative phage terminase, small subunit, P27 family CKQ55_RS00280 75f28d68da7388bab38a441fb1a973c4 154 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 37 152 2.3E-22 T 29-03-2018 IPR006448 Putative phage terminase, small subunit, P27 family CKQ55_RS01520 46867bf4a0c22dfcefaa16f8aa935370 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 14 174 1.3E-51 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CKQ55_RS01520 46867bf4a0c22dfcefaa16f8aa935370 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 174 2.0E-53 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CKQ55_RS07935 4ae01a2a3c49e122d587937e1b651424 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 7.0E-56 T 29-03-2018 CKQ55_RS07935 4ae01a2a3c49e122d587937e1b651424 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 23 106 6.8E-10 T 29-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CKQ55_RS18220 e1d1ce30b5cfb13472de17f4534605f8 163 Pfam PF15953 Putative propanediol utilisation 7 157 7.1E-57 T 29-03-2018 IPR030992 Microcompartment protein PduM GO:0005198 CKQ55_RS18220 e1d1ce30b5cfb13472de17f4534605f8 163 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 7 159 9.9E-60 T 29-03-2018 IPR030992 Microcompartment protein PduM GO:0005198 CKQ55_RS27890 7b0b7c1556413a3fbc6eaabd4341cc20 333 SUPERFAMILY SSF51679 4 324 7.59E-62 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS27890 7b0b7c1556413a3fbc6eaabd4341cc20 333 Gene3D G3DSA:3.20.20.30 3 329 1.5E-60 T 29-03-2018 CKQ55_RS27890 7b0b7c1556413a3fbc6eaabd4341cc20 333 Pfam PF00296 Luciferase-like monooxygenase 17 296 2.7E-31 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS27890 7b0b7c1556413a3fbc6eaabd4341cc20 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 324 3.1E-105 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 Gene3D G3DSA:1.20.1250.20 3 199 9.0E-36 T 29-03-2018 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 SUPERFAMILY SSF103473 212 397 1.11E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 Gene3D G3DSA:1.20.1250.20 200 399 2.9E-25 T 29-03-2018 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.3E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 PRINTS PR01035 Tetracycline resistance protein signature 79 103 1.3E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 PRINTS PR01035 Tetracycline resistance protein signature 106 127 1.3E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.3E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.3E-11 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 SUPERFAMILY SSF103473 6 198 1.83E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS06600 b52ec27a2098f90265b7b944dbe09f9c 399 Pfam PF07690 Major Facilitator Superfamily 11 235 2.4E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS04160 2450d179e49c4d027a41c80245c159a8 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.618 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CKQ55_RS04160 2450d179e49c4d027a41c80245c159a8 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 6.8E-29 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CKQ55_RS04160 2450d179e49c4d027a41c80245c159a8 87 Gene3D G3DSA:3.30.70.260 5 87 1.5E-30 T 29-03-2018 CKQ55_RS04160 2450d179e49c4d027a41c80245c159a8 87 SUPERFAMILY SSF117991 1 87 3.14E-31 T 29-03-2018 IPR027471 YbeD-like domain CKQ55_RS03015 023394b307130b0ea8bbdaa3d2180236 251 SUPERFAMILY SSF69572 4 249 4.45E-87 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS03015 023394b307130b0ea8bbdaa3d2180236 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 1.9E-131 T 29-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CKQ55_RS03015 023394b307130b0ea8bbdaa3d2180236 251 Gene3D G3DSA:3.40.50.720 2 250 8.9E-77 T 29-03-2018 CKQ55_RS03015 023394b307130b0ea8bbdaa3d2180236 251 Pfam PF00899 ThiF family 13 246 1.1E-63 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CKQ55_RS02280 b9f3275cce71b92d67dce6e219b8e142 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 5.0E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS02280 b9f3275cce71b92d67dce6e219b8e142 371 SUPERFAMILY SSF111369 52 298 6.41E-28 T 29-03-2018 CKQ55_RS02280 b9f3275cce71b92d67dce6e219b8e142 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 362 3.8E-56 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS02280 b9f3275cce71b92d67dce6e219b8e142 371 Gene3D G3DSA:1.20.1600.10 31 305 1.6E-34 T 29-03-2018 CKQ55_RS19530 74b1bb4a239157b28de64fa3328f5397 67 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 1.6E-15 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CKQ55_RS19530 74b1bb4a239157b28de64fa3328f5397 67 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 1.2E-18 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CKQ55_RS28745 ba543b79d52691907d91cba4f5746092 187 Pfam PF07274 Protein of unknown function (DUF1440) 29 163 4.4E-49 T 29-03-2018 IPR009898 Protein of unknown function DUF1440 CKQ55_RS27345 7b28a50f7645030b25ad4f58a8e61041 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 199 27.159 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS27345 7b28a50f7645030b25ad4f58a8e61041 199 PIRSF PIRSF006102 2 199 1.2E-51 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS27345 7b28a50f7645030b25ad4f58a8e61041 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 197 1.2E-49 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CKQ55_RS27345 7b28a50f7645030b25ad4f58a8e61041 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 4 197 4.0E-93 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 CKQ55_RS21260 1d1ad948589551eac8b9bea83f88b703 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 1.7E-142 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane CKQ55_RS00350 9a3c44a4e0b2110983847c8f647f84be 276 Pfam PF03589 Antitermination protein 23 109 1.0E-21 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 CKQ55_RS00350 9a3c44a4e0b2110983847c8f647f84be 276 Pfam PF03589 Antitermination protein 174 258 3.2E-22 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 CKQ55_RS00350 9a3c44a4e0b2110983847c8f647f84be 276 Gene3D G3DSA:2.10.230.10 99 187 1.2E-7 T 29-03-2018 CKQ55_RS00350 9a3c44a4e0b2110983847c8f647f84be 276 SUPERFAMILY SSF57938 165 215 2.88E-6 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CKQ55_RS23835 1fa1eb23c84dbda2ab81d0d9e843b10d 217 Pfam PF00149 Calcineurin-like phosphoesterase 12 100 1.2E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CKQ55_RS23835 1fa1eb23c84dbda2ab81d0d9e843b10d 217 SUPERFAMILY SSF56300 11 212 2.63E-43 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS23835 1fa1eb23c84dbda2ab81d0d9e843b10d 217 Gene3D G3DSA:3.60.21.10 2 216 1.2E-36 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CKQ55_RS23835 1fa1eb23c84dbda2ab81d0d9e843b10d 217 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 70 75 - T 29-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 SUPERFAMILY SSF52540 1 239 3.19E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 Gene3D G3DSA:3.40.50.300 1 242 1.1E-72 T 29-03-2018 CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 Pfam PF00005 ABC transporter 17 162 1.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 Pfam PF00571 CBS domain 265 307 7.2E-5 T 29-03-2018 IPR000644 CBS domain CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 SUPERFAMILY SSF54631 265 307 1.97E-7 T 29-03-2018 CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 Gene3D G3DSA:3.10.580.10 263 314 7.3E-7 T 29-03-2018 CKQ55_RS21925 ff95bf4cac7276337c3a7fe1076e4802 315 SMART SM00382 26 212 4.7E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS02335 14f7bf3e82d9b615a61047e6af6472c6 276 Gene3D G3DSA:3.40.80.10 42 192 4.7E-43 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS02335 14f7bf3e82d9b615a61047e6af6472c6 276 Gene3D G3DSA:1.10.101.10 193 276 1.0E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like CKQ55_RS02335 14f7bf3e82d9b615a61047e6af6472c6 276 SMART SM00644 32 178 2.1E-37 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS02335 14f7bf3e82d9b615a61047e6af6472c6 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 42 179 3.3E-26 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS02335 14f7bf3e82d9b615a61047e6af6472c6 276 SUPERFAMILY SSF47090 198 273 6.36E-21 T 29-03-2018 IPR002477 Peptidoglycan binding-like CKQ55_RS02335 14f7bf3e82d9b615a61047e6af6472c6 276 SUPERFAMILY SSF55846 23 194 8.9E-52 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 50 447 7.7E-176 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 Gene3D G3DSA:3.40.710.10 20 477 4.1E-39 T 29-03-2018 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 3.2E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 3.2E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 3.2E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 3.2E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 3.2E-39 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 SUPERFAMILY SSF56601 23 473 1.01E-99 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CKQ55_RS16015 b02ea401166e6298bde6d941646afda7 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 5.6E-167 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CKQ55_RS20930 b05e871e0d1771c9be848fee2cb9ee85 219 Pfam PF09335 SNARE associated Golgi protein 49 177 4.7E-26 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS05810 bd7cd935b879170cb368574856e5660d 152 Gene3D G3DSA:2.40.50.140 93 148 5.2E-14 T 29-03-2018 CKQ55_RS05810 bd7cd935b879170cb368574856e5660d 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 5.9E-24 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain CKQ55_RS05810 bd7cd935b879170cb368574856e5660d 152 SUPERFAMILY SSF141322 106 150 3.92E-7 T 29-03-2018 CKQ55_RS24835 90d81cd32c6e9d90dbedae3da5d200dc 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 452 3.0E-159 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 CKQ55_RS24835 90d81cd32c6e9d90dbedae3da5d200dc 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 46.34 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 CKQ55_RS07540 a1ddfda5507dce35f8e0c471fdcb7a6f 198 Pfam PF01351 Ribonuclease HII 13 187 1.5E-37 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain CKQ55_RS07540 a1ddfda5507dce35f8e0c471fdcb7a6f 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 37.578 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 CKQ55_RS07540 a1ddfda5507dce35f8e0c471fdcb7a6f 198 Gene3D G3DSA:3.30.420.10 3 198 1.4E-66 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS07540 a1ddfda5507dce35f8e0c471fdcb7a6f 198 SUPERFAMILY SSF53098 3 195 8.8E-69 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CKQ55_RS23075 f588f47c66e175537af808ca6c01861b 273 SMART SM00862 23 100 4.0E-11 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS23075 f588f47c66e175537af808ca6c01861b 273 Gene3D G3DSA:1.10.10.10 5 103 2.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23075 f588f47c66e175537af808ca6c01861b 273 SUPERFAMILY SSF46894 14 99 1.45E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CKQ55_RS23075 f588f47c66e175537af808ca6c01861b 273 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 99 2.3E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CKQ55_RS11470 9ad5c4c063d374f0b0f7dc7b62d5eada 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 3.3E-83 T 29-03-2018 IPR007338 Protein of unknown function DUF416 CKQ55_RS11470 9ad5c4c063d374f0b0f7dc7b62d5eada 196 Gene3D G3DSA:1.20.1590.10 5 194 2.5E-77 T 29-03-2018 IPR023381 YP001051499.1-like domain CKQ55_RS02865 37eb1ea2969caf87b6f8a9e915918e67 298 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 17 201 5.2E-58 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS02865 37eb1ea2969caf87b6f8a9e915918e67 298 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 15 196 3.4E-59 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS01575 1127e1494c92d0247ef6c399be7939b9 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 217 6.3E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01575 1127e1494c92d0247ef6c399be7939b9 223 SUPERFAMILY SSF161098 17 203 9.29E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS01575 1127e1494c92d0247ef6c399be7939b9 223 Gene3D G3DSA:1.10.3720.10 2 222 2.2E-37 T 29-03-2018 CKQ55_RS01575 1127e1494c92d0247ef6c399be7939b9 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 112 8.5E-22 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS31685 dd21e25a291346c2e376386eed33a3ab 216 Pfam PF03692 Putative zinc- or iron-chelating domain 73 140 3.9E-10 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CKQ55_RS15745 845553bc4fb0f6343740415d93766be8 422 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 6 413 7.2E-62 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS15745 845553bc4fb0f6343740415d93766be8 422 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 368 384 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CKQ55_RS15745 845553bc4fb0f6343740415d93766be8 422 Pfam PF03600 Citrate transporter 15 265 1.4E-32 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CKQ55_RS13110 7a74d46f5f5e580830775aa1ea5c7b35 291 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 285 3.0E-92 T 29-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CKQ55_RS14830 9066e7675cd65f6eafcb6d8ad3c65101 531 SMART SM00858 11 82 1.3E-7 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CKQ55_RS14830 9066e7675cd65f6eafcb6d8ad3c65101 531 Pfam PF08666 SAF domain 11 81 1.1E-7 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CKQ55_RS14830 9066e7675cd65f6eafcb6d8ad3c65101 531 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 527 1.7E-138 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CKQ55_RS06165 16e53b9e40ff12d77f7976124c85fad5 133 Gene3D G3DSA:3.10.129.10 1 131 4.0E-36 T 29-03-2018 CKQ55_RS06165 16e53b9e40ff12d77f7976124c85fad5 133 SUPERFAMILY SSF54637 3 130 1.41E-39 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS06165 16e53b9e40ff12d77f7976124c85fad5 133 Pfam PF13279 Thioesterase-like superfamily 11 126 5.4E-16 T 29-03-2018 CKQ55_RS06165 16e53b9e40ff12d77f7976124c85fad5 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 1.4E-33 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CKQ55_RS06165 16e53b9e40ff12d77f7976124c85fad5 133 PIRSF PIRSF003230 1 132 7.8E-21 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 SUPERFAMILY SSF53474 7 287 4.39E-62 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 1.8E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 1.8E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 1.8E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 1.8E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 Pfam PF12697 Alpha/beta hydrolase family 38 278 4.3E-21 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 Hamap MF_01654 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase [mhpC]. 2 287 70.741 T 29-03-2018 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GO:0005737|GO:0016787|GO:0018771|GO:0019439|GO:0042803 KEGG: 00360+3.7.1.14|MetaCyc: PWY-6690 CKQ55_RS25025 a0b0d58b4a6dab8ea7e55e8740469994 288 Gene3D G3DSA:3.40.50.1820 6 288 1.2E-57 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS05675 9898cab3fe6f6f5cbed2a5c868805f09 175 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 7 171 2.8E-64 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS05675 9898cab3fe6f6f5cbed2a5c868805f09 175 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 6 169 3.3E-55 T 29-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CKQ55_RS01060 02ea4d2e41e3301f7bf647fec14bf9b1 144 Pfam PF12098 Protein of unknown function (DUF3574) 43 144 3.4E-40 T 29-03-2018 IPR021957 Protein of unknown function DUF3574 CKQ55_RS31570 369790a82219219278b76cd4f78a5cfd 414 Pfam PF05159 Capsule polysaccharide biosynthesis protein 83 389 2.8E-89 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CKQ55_RS20825 f13681caf7551e01a7109dd6fa3c2347 298 Gene3D G3DSA:1.20.1080.10 30 291 3.9E-52 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CKQ55_RS20825 f13681caf7551e01a7109dd6fa3c2347 298 Pfam PF01226 Formate/nitrite transporter 40 275 2.6E-42 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CKQ55_RS29420 1fbcfa38ca81d5d88e8ee0c47d86361e 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 23.25 T 29-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CKQ55_RS29420 1fbcfa38ca81d5d88e8ee0c47d86361e 102 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 4.4E-21 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CKQ55_RS17625 f4b5a32dd127d644539ef1d7e4959d27 102 Pfam PF11682 Probable zinc-ribbon 2 98 8.1E-17 T 29-03-2018 IPR021696 Protein of unknown function DUF3279 CKQ55_RS26480 d3868af761e745d5dcd35d93595423b1 253 Pfam PF03741 Integral membrane protein TerC family 15 204 6.8E-49 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CKQ55_RS07940 e2cc8a108f60de736b3983eaaeb667e0 108 Gene3D G3DSA:1.25.40.10 5 104 7.3E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS09340 349a668241db1a0b4876a6cd42484d66 85 Gene3D G3DSA:2.40.50.220 1 85 4.6E-18 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS09340 349a668241db1a0b4876a6cd42484d66 85 SUPERFAMILY SSF159133 1 83 1.24E-17 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS09340 349a668241db1a0b4876a6cd42484d66 85 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 57 5.0E-4 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS09340 349a668241db1a0b4876a6cd42484d66 85 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 63 1.6E-16 T 29-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CKQ55_RS25660 fab6f738aabdc7930a811c47524c358e 78 Pfam PF07869 Protein of unknown function (DUF1656) 21 70 2.0E-11 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CKQ55_RS30550 db12d75c1f772f6463e6b337f0737925 80 Pfam PF11100 Conjugal transfer protein TrbE 12 71 1.1E-10 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE CKQ55_RS30550 db12d75c1f772f6463e6b337f0737925 80 ProDom PD028820 PLASMID TRBE CONJUGATIVE TRANSFER MEMBRANE TRANSMEMBRANE INNER 11 78 3.0E-8 T 29-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE CKQ55_RS04180 fc054153a92a72002874b3be6998496a 67 Pfam PF02416 mttA/Hcf106 family 4 54 8.5E-14 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CKQ55_RS04180 fc054153a92a72002874b3be6998496a 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 26.751 T 29-03-2018 IPR024905 Sec-independent protein translocase protein TatE CKQ55_RS04180 fc054153a92a72002874b3be6998496a 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 21.527 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CKQ55_RS04180 fc054153a92a72002874b3be6998496a 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 5.9E-21 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CKQ55_RS17130 05342344d3ed28899332bb0dd47ef1dd 188 Pfam PF02325 YGGT family 101 167 3.0E-17 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CKQ55_RS17130 05342344d3ed28899332bb0dd47ef1dd 188 Pfam PF02325 YGGT family 10 78 2.2E-21 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CKQ55_RS29430 53db634ba9c36f62c460fc61d2e7150d 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 6.8E-93 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CKQ55_RS29430 53db634ba9c36f62c460fc61d2e7150d 196 Pfam PF00925 GTP cyclohydrolase II 5 170 1.0E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CKQ55_RS29430 53db634ba9c36f62c460fc61d2e7150d 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.539 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CKQ55_RS29430 53db634ba9c36f62c460fc61d2e7150d 196 SUPERFAMILY SSF142695 3 173 4.58E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CKQ55_RS16350 9d7daeb615a1706444135f25e8ed668b 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 101 9.8E-32 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CKQ55_RS16350 9d7daeb615a1706444135f25e8ed668b 101 Gene3D G3DSA:1.20.5.1230 2 86 4.7E-5 T 29-03-2018 CKQ55_RS13415 83c573cbbc2fcd43c2879cfc9fc4fc06 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 130 4.1E-10 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CKQ55_RS13415 83c573cbbc2fcd43c2879cfc9fc4fc06 206 SUPERFAMILY SSF50475 44 148 2.16E-13 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS13415 83c573cbbc2fcd43c2879cfc9fc4fc06 206 Gene3D G3DSA:2.30.110.10 31 191 1.2E-21 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS06280 0a02dc9c2752a552cbe1a09329066583 106 SUPERFAMILY SSF54909 1 106 1.58E-31 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS06280 0a02dc9c2752a552cbe1a09329066583 106 Pfam PF07978 NIPSNAP 3 104 6.9E-31 T 29-03-2018 IPR012577 NIPSNAP CKQ55_RS06280 0a02dc9c2752a552cbe1a09329066583 106 Gene3D G3DSA:3.30.70.100 1 106 3.1E-30 T 29-03-2018 CKQ55_RS25380 d0d20fd8b34296b5518b840e135597db 175 Pfam PF00419 Fimbrial protein 31 174 4.3E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS25380 d0d20fd8b34296b5518b840e135597db 175 Gene3D G3DSA:2.60.40.1090 27 175 4.2E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS25380 d0d20fd8b34296b5518b840e135597db 175 SUPERFAMILY SSF49401 28 175 1.14E-22 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 Pfam PF00462 Glutaredoxin 4 69 1.1E-16 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 SUPERFAMILY SSF52833 4 82 1.1E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 PRINTS PR00160 Glutaredoxin signature 3 21 6.0E-12 T 29-03-2018 IPR014025 Glutaredoxin subgroup CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 PRINTS PR00160 Glutaredoxin signature 66 79 6.0E-12 T 29-03-2018 IPR014025 Glutaredoxin subgroup CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 PRINTS PR00160 Glutaredoxin signature 52 65 6.0E-12 T 29-03-2018 IPR014025 Glutaredoxin subgroup CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 7.9E-52 T 29-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CKQ55_RS02435 9963e8249f9951510e1371d1cf690b6c 87 Gene3D G3DSA:3.40.30.10 1 83 8.3E-22 T 29-03-2018 CKQ55_RS08460 e048fa62b678d2a623f7a914cfbd946d 446 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 18 441 5.4E-176 T 29-03-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes CKQ55_RS08460 e048fa62b678d2a623f7a914cfbd946d 446 PIRSF PIRSF005348 3 446 1.6E-155 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CKQ55_RS08460 e048fa62b678d2a623f7a914cfbd946d 446 Pfam PF03390 2-hydroxycarboxylate transporter family 23 440 2.8E-147 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CKQ55_RS31135 b33cf907963245a37b88e119695b92ad 215 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 4 202 8.9E-69 T 29-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CKQ55_RS31135 b33cf907963245a37b88e119695b92ad 215 Pfam PF12477 Sex factor F TraW protein N terminal 3 30 1.3E-6 T 29-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain CKQ55_RS03710 89218e1fdbe7024439b7c913d04317ee 256 SMART SM00342 164 247 6.2E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS03710 89218e1fdbe7024439b7c913d04317ee 256 SUPERFAMILY SSF46689 147 198 3.75E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS03710 89218e1fdbe7024439b7c913d04317ee 256 Gene3D G3DSA:2.60.120.10 32 200 6.5E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS03710 89218e1fdbe7024439b7c913d04317ee 256 Gene3D G3DSA:1.10.10.60 201 255 1.5E-9 T 29-03-2018 CKQ55_RS03710 89218e1fdbe7024439b7c913d04317ee 256 Pfam PF12833 Helix-turn-helix domain 170 249 3.7E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CKQ55_RS03710 89218e1fdbe7024439b7c913d04317ee 256 SUPERFAMILY SSF46689 200 251 2.28E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CKQ55_RS02570 890ddcd5b4d5dfe70b29fcee870f3ab4 140 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 139 2.0E-53 T 29-03-2018 IPR004891 MerC mercury resistance protein CKQ55_RS02570 890ddcd5b4d5dfe70b29fcee870f3ab4 140 Pfam PF03203 MerC mercury resistance protein 9 120 4.6E-20 T 29-03-2018 IPR004891 MerC mercury resistance protein CKQ55_RS05470 729c9621d92215b1d6f90d93775e7972 313 Gene3D G3DSA:2.30.36.70 114 157 0.0012 T 29-03-2018 CKQ55_RS05470 729c9621d92215b1d6f90d93775e7972 313 PIRSF PIRSF029202 2 313 5.2E-103 T 29-03-2018 IPR020049 Protein of unknown function DUF2184 CKQ55_RS05470 729c9621d92215b1d6f90d93775e7972 313 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 73 313 5.2E-82 T 29-03-2018 IPR020049 Protein of unknown function DUF2184 CKQ55_RS31655 d43782a80cdb3642a3a898eaa0eca8ab 104 Pfam PF07424 TrbM 30 90 2.2E-8 T 29-03-2018 IPR009989 TrbM CKQ55_RS23895 b806f6d359ae19356b226f986a72fb98 79 Pfam PF13996 YobH-like protein 2 71 2.8E-38 T 29-03-2018 IPR025611 YobH-like protein CKQ55_RS20620 b0a339a0218d315c1dd262e1a55b6109 288 SUPERFAMILY SSF53613 23 279 3.27E-61 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS20620 b0a339a0218d315c1dd262e1a55b6109 288 Pfam PF08543 Phosphomethylpyrimidine kinase 93 267 6.4E-24 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CKQ55_RS20620 b0a339a0218d315c1dd262e1a55b6109 288 Gene3D G3DSA:3.40.1190.20 18 278 3.6E-48 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS20620 b0a339a0218d315c1dd262e1a55b6109 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 22 279 2.1E-50 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CKQ55_RS05580 0b67f67537f7407b44a3e0efe06d4c34 91 Pfam PF15944 Domain of unknown function (DUF4752) 1 82 2.7E-40 T 29-03-2018 IPR031858 Protein of unknown function DUF4752 CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 SMART SM00345 17 75 5.4E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 Gene3D G3DSA:1.10.10.10 1 70 2.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 Pfam PF07729 FCD domain 89 208 8.1E-24 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 SMART SM00895 85 209 6.4E-16 T 29-03-2018 IPR011711 GntR, C-terminal CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 1.0E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 SUPERFAMILY SSF48008 82 213 1.41E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 Gene3D G3DSA:1.20.120.530 71 224 7.2E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CKQ55_RS26240 c315c6804e96f60e57e25a096eaca266 228 SUPERFAMILY SSF46785 8 98 9.36E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS16695 1725fbff32057e2eb7f2851df7cf223a 274 Hamap MF_01384 Urease accessory protein UreD [ureD]. 13 258 28.112 T 29-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CKQ55_RS16695 1725fbff32057e2eb7f2851df7cf223a 274 Pfam PF01774 UreD urease accessory protein 54 243 2.5E-44 T 29-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CKQ55_RS06620 8c763010ce6bd70d57ec5e5e04631746 100 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 100 2.0E-31 T 29-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 CKQ55_RS06620 8c763010ce6bd70d57ec5e5e04631746 100 Pfam PF10954 Protein of unknown function (DUF2755) 1 100 2.2E-47 T 29-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.0E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 SUPERFAMILY SSF50249 3 68 4.29E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 PIRSF PIRSF002599 1 69 2.0E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 SMART SM00357 5 69 7.0E-33 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CKQ55_RS04195 2bd6fd99d5732ccb0489a4726a5a8bf5 69 Gene3D G3DSA:2.40.50.140 4 69 3.4E-29 T 29-03-2018 CKQ55_RS22905 d49761dacbe2ef7e92c30aba01fcc256 478 Pfam PF14052 Capsule assembly protein Wzi 89 465 7.0E-110 T 29-03-2018 IPR026950 Capsule assembly protein Wzi CKQ55_RS28020 aa0f6e14371edd2cec9459c7f21de4ec 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 246 1.4E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28020 aa0f6e14371edd2cec9459c7f21de4ec 268 SUPERFAMILY SSF161098 6 257 1.09E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28020 aa0f6e14371edd2cec9459c7f21de4ec 268 Gene3D G3DSA:1.10.3720.10 7 262 4.4E-34 T 29-03-2018 CKQ55_RS11955 bb479024c1c504d210447d44767aa912 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 358 64.269 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CKQ55_RS11955 bb479024c1c504d210447d44767aa912 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 4.4E-177 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CKQ55_RS11955 bb479024c1c504d210447d44767aa912 359 Gene3D G3DSA:3.40.50.2000 170 354 3.5E-6 T 29-03-2018 CKQ55_RS07290 0d2bfe0489d9f251edf6009d453e5629 72 Pfam PF04400 (Na+)-NQR maturation NqrM 24 65 5.4E-22 T 29-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM CKQ55_RS16490 e88fb41271ceb451de5a03a243a5bb24 488 Pfam PF05488 PAAR motif 10 79 5.6E-8 T 29-03-2018 IPR008727 PAAR motif CKQ55_RS16490 e88fb41271ceb451de5a03a243a5bb24 488 Gene3D G3DSA:1.10.490.30 336 468 0.0086 T 29-03-2018 CKQ55_RS18805 e7cd3475942019ed654fc21a4f099086 184 SUPERFAMILY SSF49401 34 184 2.29E-30 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS18805 e7cd3475942019ed654fc21a4f099086 184 Pfam PF00419 Fimbrial protein 36 183 8.2E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS18805 e7cd3475942019ed654fc21a4f099086 184 Gene3D G3DSA:2.60.40.1090 32 184 1.8E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS29585 a8543ce9f7065668cfadd7cf3377700a 438 SUPERFAMILY SSF81340 6 401 6.8E-82 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS29585 a8543ce9f7065668cfadd7cf3377700a 438 Pfam PF00654 Voltage gated chloride channel 60 391 4.3E-64 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS29585 a8543ce9f7065668cfadd7cf3377700a 438 PRINTS PR00762 Chloride channel signature 101 120 1.0E-5 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS29585 a8543ce9f7065668cfadd7cf3377700a 438 PRINTS PR00762 Chloride channel signature 152 171 1.0E-5 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS29585 a8543ce9f7065668cfadd7cf3377700a 438 Gene3D G3DSA:1.10.3080.10 9 410 8.4E-57 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CKQ55_RS11520 cce0b7ecf9675783f78f0d51954dfbde 377 SUPERFAMILY SSF102114 36 363 1.96E-52 T 29-03-2018 CKQ55_RS11520 cce0b7ecf9675783f78f0d51954dfbde 377 Pfam PF04055 Radical SAM superfamily 82 208 3.7E-9 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CKQ55_RS11520 cce0b7ecf9675783f78f0d51954dfbde 377 Gene3D G3DSA:3.20.20.70 19 369 9.4E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS11520 cce0b7ecf9675783f78f0d51954dfbde 377 SMART SM00876 258 361 1.2E-28 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS11520 cce0b7ecf9675783f78f0d51954dfbde 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 8.4E-21 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CKQ55_RS11520 cce0b7ecf9675783f78f0d51954dfbde 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 7.3E-160 T 29-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CKQ55_RS00345 259ed9639cb01e715b0b428df2f666c9 63 SUPERFAMILY SSF46785 2 51 1.79E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00345 259ed9639cb01e715b0b428df2f666c9 63 Gene3D G3DSA:1.10.10.10 2 55 3.6E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28615 8c6dcfdd3320852d877386c994b25c72 90 Pfam PF03891 Domain of unknown function (DUF333) 40 84 1.2E-15 T 29-03-2018 IPR005590 Protein of unknown function DUF333 CKQ55_RS13865 94c7940c71db9d55a77b6ea9fa7d3211 551 Pfam PF02652 L-lactate permease 16 542 3.6E-231 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CKQ55_RS13865 94c7940c71db9d55a77b6ea9fa7d3211 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 1.8E-238 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CKQ55_RS28435 3d461d8ef270b47010e9314d1b6e5107 182 Gene3D G3DSA:1.25.40.10 63 177 2.5E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS28435 3d461d8ef270b47010e9314d1b6e5107 182 SUPERFAMILY SSF48452 71 167 9.05E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CKQ55_RS28435 3d461d8ef270b47010e9314d1b6e5107 182 Pfam PF14559 Tetratricopeptide repeat 111 176 2.5E-6 T 29-03-2018 CKQ55_RS28435 3d461d8ef270b47010e9314d1b6e5107 182 SMART SM00028 132 165 97.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS28435 3d461d8ef270b47010e9314d1b6e5107 182 SMART SM00028 98 131 8.3E-5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CKQ55_RS20720 36a9feb29cd695daa6b50ca2c3ee1973 130 SUPERFAMILY SSF46955 4 53 3.17E-11 T 29-03-2018 IPR009061 Putative DNA-binding domain CKQ55_RS20720 36a9feb29cd695daa6b50ca2c3ee1973 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 129 1.0E-31 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 CKQ55_RS20720 36a9feb29cd695daa6b50ca2c3ee1973 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 128 5.1E-48 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 CKQ55_RS20720 36a9feb29cd695daa6b50ca2c3ee1973 130 Gene3D G3DSA:1.10.10.10 7 61 4.0E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS04710 2c394053c91a83fee74d69c12d486766 239 Pfam PF09992 Phosphodiester glycosidase 70 217 1.4E-19 T 29-03-2018 IPR018711 Phosphodiester glycosidase CKQ55_RS31075 11c0046ffb3e737eb329e5e7ac3a211a 116 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 19 116 1.3E-40 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CKQ55_RS31075 11c0046ffb3e737eb329e5e7ac3a211a 116 Pfam PF05513 TraA 15 114 2.9E-45 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CKQ55_RS22380 2a91684cbe0cfbc6ddf4b2a983f8c0e4 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 8.7E-50 T 29-03-2018 IPR006498 Tail tube protein CKQ55_RS22380 2a91684cbe0cfbc6ddf4b2a983f8c0e4 171 Pfam PF04985 Phage tail tube protein FII 4 170 5.3E-61 T 29-03-2018 IPR006498 Tail tube protein CKQ55_RS23755 d090cc0067712772b70a5d7c233cc47c 213 SUPERFAMILY SSF51569 3 210 5.49E-67 T 29-03-2018 CKQ55_RS23755 d090cc0067712772b70a5d7c233cc47c 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 29-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS23755 d090cc0067712772b70a5d7c233cc47c 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 210 2.4E-84 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS23755 d090cc0067712772b70a5d7c233cc47c 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS23755 d090cc0067712772b70a5d7c233cc47c 213 Pfam PF01081 KDPG and KHG aldolase 9 204 1.1E-88 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS23755 d090cc0067712772b70a5d7c233cc47c 213 Gene3D G3DSA:3.20.20.70 1 213 2.0E-29 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS24450 0ca2b8cc524c637878f85dc9cfea3393 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 2 365 5.8E-121 T 29-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 CKQ55_RS24450 0ca2b8cc524c637878f85dc9cfea3393 366 Pfam PF01699 Sodium/calcium exchanger protein 224 364 8.8E-8 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CKQ55_RS24450 0ca2b8cc524c637878f85dc9cfea3393 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 4.2E-14 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CKQ55_RS00370 d53e35f393bdd44262ee9d45090be0e5 158 SUPERFAMILY SSF46785 2 71 6.37E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00370 d53e35f393bdd44262ee9d45090be0e5 158 Gene3D G3DSA:1.10.10.10 2 68 4.9E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS00370 d53e35f393bdd44262ee9d45090be0e5 158 Pfam PF01726 LexA DNA binding domain 1 65 3.1E-20 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CKQ55_RS09660 9d5110ed530b0e85cc7eaee75111ebdf 185 Pfam PF16970 Type-1 fimbrial protein, A 56 185 2.0E-22 T 29-03-2018 CKQ55_RS09660 9d5110ed530b0e85cc7eaee75111ebdf 185 SUPERFAMILY SSF49401 30 185 6.46E-27 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS09660 9d5110ed530b0e85cc7eaee75111ebdf 185 Gene3D G3DSA:2.60.40.1090 29 185 3.4E-33 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS26890 604aeda328e19f9536b42d8a533fde49 142 Pfam PF04126 Cyclophilin-like 29 130 2.7E-5 T 29-03-2018 IPR025658 Cyclophilin TM1367-like domain CKQ55_RS26890 604aeda328e19f9536b42d8a533fde49 142 SUPERFAMILY SSF50891 29 141 1.18E-24 T 29-03-2018 IPR029000 Cyclophilin-like domain CKQ55_RS29740 fbce9abccc1a12b3c7a5e56d9391a68a 183 Pfam PF02627 Carboxymuconolactone decarboxylase family 55 122 4.5E-8 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CKQ55_RS29740 fbce9abccc1a12b3c7a5e56d9391a68a 183 Gene3D G3DSA:1.20.1290.10 17 176 9.2E-27 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS29740 fbce9abccc1a12b3c7a5e56d9391a68a 183 SUPERFAMILY SSF69118 3 173 3.06E-37 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CKQ55_RS06820 9944e5d7e8a0dfe97a93440287698917 280 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 27 273 4.9E-89 T 29-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CKQ55_RS06820 9944e5d7e8a0dfe97a93440287698917 280 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS06820 9944e5d7e8a0dfe97a93440287698917 280 SMART SM00382 53 273 1.6E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS06820 9944e5d7e8a0dfe97a93440287698917 280 Gene3D G3DSA:3.40.50.300 24 277 1.7E-57 T 29-03-2018 CKQ55_RS06820 9944e5d7e8a0dfe97a93440287698917 280 Pfam PF00005 ABC transporter 44 205 2.6E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS06820 9944e5d7e8a0dfe97a93440287698917 280 SUPERFAMILY SSF52540 27 266 6.01E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS28060 1c9e9e8754c92bb54daf0844ebe65b75 41 Pfam PF10617 Protein of unknown function (DUF2474) 4 40 1.6E-16 T 29-03-2018 IPR018895 Protein of unknown function DUF2474 CKQ55_RS22005 54535da271c19c147b69dfb2172745b9 140 PIRSF PIRSF006276 1 140 3.6E-17 T 29-03-2018 IPR006015 Universal stress protein A CKQ55_RS22005 54535da271c19c147b69dfb2172745b9 140 Gene3D G3DSA:3.40.50.620 3 138 1.5E-9 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CKQ55_RS22005 54535da271c19c147b69dfb2172745b9 140 SUPERFAMILY SSF52402 4 136 9.21E-13 T 29-03-2018 CKQ55_RS22005 54535da271c19c147b69dfb2172745b9 140 Pfam PF00582 Universal stress protein family 4 136 4.4E-7 T 29-03-2018 IPR006016 UspA GO:0006950 CKQ55_RS22275 3596fa34f10312f4395cb815c8a9e12e 589 Gene3D G3DSA:1.10.10.60 8 74 1.7E-6 T 29-03-2018 CKQ55_RS22275 3596fa34f10312f4395cb815c8a9e12e 589 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 12 69 4.7E-25 T 29-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 CKQ55_RS22275 3596fa34f10312f4395cb815c8a9e12e 589 Pfam PF03237 Terminase-like family 164 385 3.4E-57 T 29-03-2018 CKQ55_RS22275 3596fa34f10312f4395cb815c8a9e12e 589 Pfam PF17289 Terminase RNaseH-like domain 413 571 1.3E-40 T 29-03-2018 IPR035421 Terminase, large subunit gp17-like CKQ55_RS28070 ef6e7f670fd23e9d6a29571807eb753a 654 Pfam PF12392 Collagenase 391 505 4.3E-17 T 29-03-2018 IPR020988 Peptidase U32, collagenase CKQ55_RS28070 ef6e7f670fd23e9d6a29571807eb753a 654 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS28070 ef6e7f670fd23e9d6a29571807eb753a 654 Gene3D G3DSA:3.20.20.70 6 174 4.7E-6 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS28070 ef6e7f670fd23e9d6a29571807eb753a 654 Pfam PF01136 Peptidase family U32 79 305 2.0E-70 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CKQ55_RS29100 ed46695fbe8d5026381c82161a0aacaa 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 222 1.5E-15 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CKQ55_RS29100 ed46695fbe8d5026381c82161a0aacaa 261 Gene3D G3DSA:3.40.50.1000 17 260 8.4E-20 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS29100 ed46695fbe8d5026381c82161a0aacaa 261 SUPERFAMILY SSF56784 15 251 1.08E-21 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS12090 e00172d3180b5b987b994eaff3e9c9de 85 SUPERFAMILY SSF55021 3 75 2.87E-12 T 29-03-2018 CKQ55_RS12090 e00172d3180b5b987b994eaff3e9c9de 85 Gene3D G3DSA:3.30.70.260 1 79 2.8E-7 T 29-03-2018 CKQ55_RS12090 e00172d3180b5b987b994eaff3e9c9de 85 Pfam PF13710 ACT domain 13 73 4.2E-27 T 29-03-2018 CKQ55_RS09220 0ed32354c198bae2f121facfc97071e2 354 Pfam PF11168 Protein of unknown function (DUF2955) 25 163 1.3E-40 T 29-03-2018 IPR022604 Protein of unknown function DUF2955 CKQ55_RS09220 0ed32354c198bae2f121facfc97071e2 354 PIRSF PIRSF029594 18 353 1.6E-101 T 29-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 CKQ55_RS04530 2a3d36bb9fddfcd783222dcbc1695c53 206 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 9 200 1.0E-49 T 29-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CKQ55_RS04530 2a3d36bb9fddfcd783222dcbc1695c53 206 SUPERFAMILY SSF141318 40 187 1.14E-14 T 29-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CKQ55_RS23040 6f689486c4f3f320a2476118b44bec3f 167 SUPERFAMILY SSF49401 27 166 2.04E-23 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS23040 6f689486c4f3f320a2476118b44bec3f 167 Gene3D G3DSA:2.60.40.1090 36 167 1.4E-25 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS16055 ed205009def042330b2e4ca4256c5647 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.1E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CKQ55_RS16055 ed205009def042330b2e4ca4256c5647 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.1E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CKQ55_RS16055 ed205009def042330b2e4ca4256c5647 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.1E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CKQ55_RS16055 ed205009def042330b2e4ca4256c5647 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.1E-43 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CKQ55_RS16055 ed205009def042330b2e4ca4256c5647 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 4.9E-27 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CKQ55_RS16055 ed205009def042330b2e4ca4256c5647 109 Pfam PF03840 Preprotein translocase SecG subunit 5 72 1.3E-21 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CKQ55_RS28535 b1cd1db4a775d20169adbb8510d0e60f 224 Pfam PF06267 Family of unknown function (DUF1028) 2 191 2.6E-67 T 29-03-2018 IPR010430 Protein of unknown function DUF1028 CKQ55_RS28535 b1cd1db4a775d20169adbb8510d0e60f 224 SUPERFAMILY SSF56235 1 224 1.77E-76 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS28535 b1cd1db4a775d20169adbb8510d0e60f 224 Gene3D G3DSA:3.60.20.10 1 216 4.3E-77 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS08595 498198130e2298536f5fd6088c90684e 177 Pfam PF09374 Predicted Peptidoglycan domain 91 175 2.4E-25 T 29-03-2018 IPR018537 Peptidoglycan binding domain CKQ55_RS08595 498198130e2298536f5fd6088c90684e 177 Pfam PF05838 Glycosyl hydrolase 108 6 88 5.2E-22 T 29-03-2018 IPR008565 Protein of unknown function DUF847 CKQ55_RS08595 498198130e2298536f5fd6088c90684e 177 SUPERFAMILY SSF53955 2 173 1.94E-42 T 29-03-2018 IPR023346 Lysozyme-like domain CKQ55_RS08595 498198130e2298536f5fd6088c90684e 177 Gene3D G3DSA:1.20.141.10 1 177 1.5E-39 T 29-03-2018 CKQ55_RS14425 3eb271a89cc325aec64f582753f9e40e 89 SUPERFAMILY SSF159871 3 89 7.46E-24 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS14425 3eb271a89cc325aec64f582753f9e40e 89 Gene3D G3DSA:3.30.1660.10 22 89 2.3E-21 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS14425 3eb271a89cc325aec64f582753f9e40e 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 1.3E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS10590 59726c745fd116c74277800f5b6779d0 320 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 285 2.4E-100 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CKQ55_RS10590 59726c745fd116c74277800f5b6779d0 320 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.002 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CKQ55_RS10590 59726c745fd116c74277800f5b6779d0 320 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.5E-58 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CKQ55_RS31085 c291717cf2ba229a7dd7503794c2f64d 188 Pfam PF05309 TraE protein 1 182 1.4E-58 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CKQ55_RS31085 c291717cf2ba229a7dd7503794c2f64d 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 1.8E-54 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CKQ55_RS07175 1d9c431eb2bbba876da7893c4719cac4 83 Pfam PF12674 Putative zinc ribbon domain 7 77 4.1E-10 T 29-03-2018 IPR025868 Putative zinc ribbon domain CKQ55_RS30380 df917328d621bcec121273f0850b5015 98 ProDom PD028710 PLASMID KORC REPRESSOR TRANSCRIPTIONAL TRANSCRIPTION DNA-BINDING REGULATION KLCC 17 96 1.0E-39 T 29-03-2018 IPR020136 Transcriptional repressor KorC CKQ55_RS11490 380483f21b7c3e0e619621fd7b1cc01a 165 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 3.8E-54 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CKQ55_RS11490 380483f21b7c3e0e619621fd7b1cc01a 165 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.168 T 29-03-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CKQ55_RS11490 380483f21b7c3e0e619621fd7b1cc01a 165 PIRSF PIRSF016548 1 159 1.2E-56 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CKQ55_RS06110 a16c761ea997121a4d1d5ee044e43d69 287 SUPERFAMILY SSF54637 5 114 3.46E-41 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS06110 a16c761ea997121a4d1d5ee044e43d69 287 Gene3D G3DSA:3.10.129.10 131 286 6.3E-54 T 29-03-2018 CKQ55_RS06110 a16c761ea997121a4d1d5ee044e43d69 287 Gene3D G3DSA:3.10.129.10 2 116 6.2E-43 T 29-03-2018 CKQ55_RS06110 a16c761ea997121a4d1d5ee044e43d69 287 SUPERFAMILY SSF54637 116 284 8.52E-59 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS06110 a16c761ea997121a4d1d5ee044e43d69 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.0E-100 T 29-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 CKQ55_RS06110 a16c761ea997121a4d1d5ee044e43d69 287 Pfam PF13622 Thioesterase-like superfamily 33 282 9.8E-60 T 29-03-2018 CKQ55_RS13395 6a45d166335bbeb189a16e6a5d4dae71 138 SUPERFAMILY SSF55729 6 134 1.5E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS13395 6a45d166335bbeb189a16e6a5d4dae71 138 Gene3D G3DSA:3.40.630.30 7 138 1.8E-19 T 29-03-2018 CKQ55_RS13395 6a45d166335bbeb189a16e6a5d4dae71 138 Pfam PF00583 Acetyltransferase (GNAT) family 45 115 1.2E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS19995 182737e8bce4c320493ef93fb55b187d 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 9.8E-13 T 29-03-2018 CKQ55_RS19995 182737e8bce4c320493ef93fb55b187d 211 Gene3D G3DSA:3.40.50.1000 1 144 1.0E-6 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS19995 182737e8bce4c320493ef93fb55b187d 211 SUPERFAMILY SSF56784 7 170 8.13E-8 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS19995 182737e8bce4c320493ef93fb55b187d 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 4 211 2.9E-121 T 29-03-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CKQ55_RS20885 bb93eaf185aca566fc4656631e63a458 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 1.6E-80 T 29-03-2018 IPR007411 Elongation factor P hydroxylase CKQ55_RS31630 5c061d1fc5612d583976ec39f3077882 404 Pfam PF03743 Bacterial conjugation TrbI-like protein 209 391 1.8E-38 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CKQ55_RS13805 ccbd84f47eb6f73f56b04e9609f82573 265 SUPERFAMILY SSF53448 2 189 5.63E-22 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS13805 ccbd84f47eb6f73f56b04e9609f82573 265 Gene3D G3DSA:3.90.550.10 3 256 3.0E-19 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS13805 ccbd84f47eb6f73f56b04e9609f82573 265 Pfam PF00535 Glycosyl transferase family 2 5 115 1.8E-15 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS05215 a1a4a727d2a7bc82593611309b7bc783 143 Gene3D G3DSA:1.10.1220.10 2 46 3.4E-4 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS30805 7818a0c933eac8afa9dd003df515926d 136 Pfam PF07128 Protein of unknown function (DUF1380) 2 128 9.5E-26 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 CKQ55_RS11040 ae2559c72e5118d801fdf830c2cdecea 129 Hamap MF_01199 Anti-adapter protein IraM [iraM]. 1 111 26.743 T 29-03-2018 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 CKQ55_RS11040 ae2559c72e5118d801fdf830c2cdecea 129 Pfam PF11183 Polymyxin resistance protein PmrD 1 76 3.0E-5 T 29-03-2018 CKQ55_RS02560 eed7f14dd87f25831317bf570a8e3f9c 116 Pfam PF02411 MerT mercuric transport protein 1 116 1.9E-64 T 29-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CKQ55_RS02560 eed7f14dd87f25831317bf570a8e3f9c 116 Gene3D G3DSA:1.10.287.910 16 68 9.8E-19 T 29-03-2018 CKQ55_RS18310 e01aee7ddcb71f0bb230b757e58fa67a 210 SUPERFAMILY SSF63965 9 207 4.71E-63 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CKQ55_RS18310 e01aee7ddcb71f0bb230b757e58fa67a 210 Gene3D G3DSA:3.40.50.10230 3 210 2.4E-74 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CKQ55_RS18310 e01aee7ddcb71f0bb230b757e58fa67a 210 Pfam PF02570 Precorrin-8X methylmutase 10 204 1.8E-65 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CKQ55_RS04345 c9b808b217e34b4f359415413569bca9 422 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 32 357 4.7E-32 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CKQ55_RS04345 c9b808b217e34b4f359415413569bca9 422 Gene3D G3DSA:3.40.50.1240 18 416 2.4E-42 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS04345 c9b808b217e34b4f359415413569bca9 422 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 33 47 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site CKQ55_RS04345 c9b808b217e34b4f359415413569bca9 422 SUPERFAMILY SSF53254 29 404 1.3E-62 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CKQ55_RS15045 65f613bff3a74df82c7be7cd55dc4a00 135 Pfam PF10748 Protein of unknown function (DUF2531) 6 130 6.2E-39 T 29-03-2018 IPR019684 HofP protein CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.3E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.3E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.3E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.3E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 SUPERFAMILY SSF51735 6 221 1.26E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PIRSF PIRSF000126 1 261 1.2E-70 T 29-03-2018 CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.2E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.2E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.2E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 Gene3D G3DSA:3.40.50.720 1 262 3.6E-54 T 29-03-2018 CKQ55_RS27430 dcf72b233f307b6d56e5dcecfc5bab46 262 Pfam PF00106 short chain dehydrogenase 6 197 6.9E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CKQ55_RS14320 f63b13a790f3aa169779129d095a7154 683 Pfam PF05170 AsmA family 1 578 4.3E-158 T 29-03-2018 IPR007844 AsmA CKQ55_RS23030 175fd05317213e5f4d47dd7e6a22d705 470 SUPERFAMILY SSF141868 193 436 6.54E-48 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23030 175fd05317213e5f4d47dd7e6a22d705 470 SMART SM00052 188 430 5.9E-42 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23030 175fd05317213e5f4d47dd7e6a22d705 470 Gene3D G3DSA:3.20.20.450 190 445 1.7E-47 T 29-03-2018 IPR001633 EAL domain CKQ55_RS23030 175fd05317213e5f4d47dd7e6a22d705 470 Pfam PF00563 EAL domain 194 425 9.0E-45 T 29-03-2018 IPR001633 EAL domain CKQ55_RS31110 00d3543982fed78abe7199e665ddf2d3 61 Gene3D G3DSA:3.40.50.300 1 57 1.5E-4 T 29-03-2018 CKQ55_RS10320 d8400e613139c7ca9640407d7fe03716 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 6.0E-93 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CKQ55_RS10320 d8400e613139c7ca9640407d7fe03716 185 Gene3D G3DSA:3.40.30.10 14 182 2.4E-5 T 29-03-2018 CKQ55_RS10320 d8400e613139c7ca9640407d7fe03716 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 181 2.0E-76 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CKQ55_RS24470 5cfb313f50d38b6a3f5f52e67dd37895 117 SUPERFAMILY SSF75169 1 117 2.62E-34 T 29-03-2018 IPR027396 DsrEFH-like CKQ55_RS24470 5cfb313f50d38b6a3f5f52e67dd37895 117 Gene3D G3DSA:3.40.1260.10 1 117 5.9E-29 T 29-03-2018 CKQ55_RS24470 5cfb313f50d38b6a3f5f52e67dd37895 117 Pfam PF02635 DsrE/DsrF-like family 3 117 4.0E-22 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CKQ55_RS29915 dc57799f9602caf40c2f8410a4ba5311 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.278 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CKQ55_RS29915 dc57799f9602caf40c2f8410a4ba5311 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 1.1E-186 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CKQ55_RS02505 ca8c600a59522efbd48e917b9c08b80a 133 Pfam PF14319 Transposase zinc-binding domain 3 93 1.2E-24 T 29-03-2018 IPR026889 Transposase zinc-binding domain CKQ55_RS02400 e3dfa5c03a0cc77bd99f3318f9789bee 317 SUPERFAMILY SSF161098 29 308 2.06E-56 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02400 e3dfa5c03a0cc77bd99f3318f9789bee 317 Gene3D G3DSA:1.10.3720.10 30 313 2.9E-42 T 29-03-2018 CKQ55_RS02400 e3dfa5c03a0cc77bd99f3318f9789bee 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 9.3E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS16520 e7b71830338c4537fc425578f6b8fcf5 149 SUPERFAMILY SSF51197 3 142 2.14E-18 T 29-03-2018 CKQ55_RS16520 e7b71830338c4537fc425578f6b8fcf5 149 Gene3D G3DSA:2.60.120.370 2 142 3.3E-19 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS16520 e7b71830338c4537fc425578f6b8fcf5 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 4.0E-21 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CKQ55_RS00930 9da1460976e72892163ec903eab67f08 842 Pfam PF00535 Glycosyl transferase family 2 246 428 2.7E-23 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS00930 9da1460976e72892163ec903eab67f08 842 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 63 745 51.834 T 29-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 CKQ55_RS00930 9da1460976e72892163ec903eab67f08 842 SUPERFAMILY SSF53448 244 532 5.63E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS00930 9da1460976e72892163ec903eab67f08 842 Gene3D G3DSA:3.90.550.10 223 503 1.4E-19 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS12580 d16be65cb0fd2ed8b86545e7269e79b2 145 SUPERFAMILY SSF55804 7 145 1.83E-30 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS12580 d16be65cb0fd2ed8b86545e7269e79b2 145 Gene3D G3DSA:3.40.930.10 2 145 3.4E-31 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS12580 d16be65cb0fd2ed8b86545e7269e79b2 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 1.6E-28 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS03235 916cdf917f1fc76cf294fd5a6b72d78b 377 Pfam PF12698 ABC-2 family transporter protein 29 370 1.0E-37 T 29-03-2018 CKQ55_RS03235 916cdf917f1fc76cf294fd5a6b72d78b 377 Gene3D G3DSA:3.40.1710.10 45 196 1.4E-22 T 29-03-2018 CKQ55_RS22780 8c2840ee9a045fcb87f82a1f11f9a400 454 Pfam PF13520 Amino acid permease 51 410 1.9E-34 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS22780 8c2840ee9a045fcb87f82a1f11f9a400 454 PIRSF PIRSF006060 3 448 7.0E-70 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 PRINTS PR00990 Ribokinase signature 216 227 3.0E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 PRINTS PR00990 Ribokinase signature 176 191 3.0E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 PRINTS PR00990 Ribokinase signature 23 42 3.0E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 Gene3D G3DSA:3.40.1190.20 3 307 2.1E-69 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 SUPERFAMILY SSF53613 1 304 4.21E-80 T 29-03-2018 IPR029056 Ribokinase-like CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CKQ55_RS05050 71e461b7e3fd3ae3d35a06bd23829b9d 307 Pfam PF00294 pfkB family carbohydrate kinase 3 298 1.2E-70 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CKQ55_RS30900 0d6c628eb4208d0ac0c01cb0d6d9e8ff 60 Pfam PF03811 InsA N-terminal domain 2 36 2.8E-20 T 29-03-2018 IPR003220 InsA N-terminal domain GO:0006313 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 Gene3D G3DSA:3.20.20.70 3 296 5.8E-69 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 PIRSF PIRSF001365 1 299 1.6E-63 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 2.7E-13 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.7E-13 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 2.7E-13 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 2.7E-13 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 Pfam PF00701 Dihydrodipicolinate synthetase family 3 291 3.4E-60 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 SMART SM01130 1 294 1.6E-68 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CKQ55_RS14840 b3ccb986be864498566e00b96d101beb 299 SUPERFAMILY SSF51569 5 294 4.5E-69 T 29-03-2018 CKQ55_RS27055 b1333fd91e0cb0c16cc03528759799a6 260 SMART SM00382 35 228 5.0E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27055 b1333fd91e0cb0c16cc03528759799a6 260 SUPERFAMILY SSF52540 10 235 6.73E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS27055 b1333fd91e0cb0c16cc03528759799a6 260 Pfam PF00005 ABC transporter 26 180 3.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27055 b1333fd91e0cb0c16cc03528759799a6 260 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27055 b1333fd91e0cb0c16cc03528759799a6 260 Gene3D G3DSA:3.40.50.300 8 242 2.0E-55 T 29-03-2018 CKQ55_RS27605 9ba0cfe37a855c837cf73d053ea53991 283 SMART SM00849 36 218 4.1E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS27605 9ba0cfe37a855c837cf73d053ea53991 283 SUPERFAMILY SSF56281 21 242 8.68E-34 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS27605 9ba0cfe37a855c837cf73d053ea53991 283 Gene3D G3DSA:3.60.15.10 29 282 9.3E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase CKQ55_RS16400 a548a1c68151582ed0c1f6135c27a59b 322 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 313 3.9E-122 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CKQ55_RS16400 a548a1c68151582ed0c1f6135c27a59b 322 Pfam PF03741 Integral membrane protein TerC family 80 282 2.8E-56 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CKQ55_RS26565 5fa2ad0a02f7ad757461a5c7e0d84670 250 Gene3D G3DSA:3.40.50.150 15 166 2.8E-24 T 29-03-2018 CKQ55_RS26565 5fa2ad0a02f7ad757461a5c7e0d84670 250 SUPERFAMILY SSF53335 18 236 7.59E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS26565 5fa2ad0a02f7ad757461a5c7e0d84670 250 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 250 41.237 T 29-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS26565 5fa2ad0a02f7ad757461a5c7e0d84670 250 Gene3D G3DSA:1.10.150.290 167 230 2.8E-30 T 29-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CKQ55_RS26565 5fa2ad0a02f7ad757461a5c7e0d84670 250 Pfam PF13649 Methyltransferase domain 36 124 5.6E-14 T 29-03-2018 CKQ55_RS23440 38dc0d0296d29a633a6d015c41a46563 137 Pfam PF13987 YedD-like protein 25 129 5.0E-53 T 29-03-2018 IPR025596 YedD-like protein CKQ55_RS06855 8c1f95536ddba386b3d014e093122552 269 Pfam PF01925 Sulfite exporter TauE/SafE 5 265 2.6E-37 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CKQ55_RS14620 1319d35306dfba4e4ca6679995bb3fd6 158 Pfam PF07977 FabA-like domain 11 132 4.3E-6 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CKQ55_RS14620 1319d35306dfba4e4ca6679995bb3fd6 158 Gene3D G3DSA:3.10.129.10 8 141 1.9E-24 T 29-03-2018 CKQ55_RS14620 1319d35306dfba4e4ca6679995bb3fd6 158 PIRSF PIRSF020565 1 157 1.3E-49 T 29-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CKQ55_RS14620 1319d35306dfba4e4ca6679995bb3fd6 158 SUPERFAMILY SSF54637 8 146 3.08E-23 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS14600 d3f1bef2d611771a9c8ab5e08d1a8b0d 127 SUPERFAMILY SSF103481 38 122 1.44E-10 T 29-03-2018 CKQ55_RS14600 d3f1bef2d611771a9c8ab5e08d1a8b0d 127 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 21.081 T 29-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CKQ55_RS02430 554864c55f0088d9a7c1943b836e1157 96 Pfam PF07214 Protein of unknown function (DUF1418) 1 93 1.4E-34 T 29-03-2018 IPR010815 Protein of unknown function DUF1418 CKQ55_RS25055 8a016875f663df49b065287a50e49201 467 Pfam PF09362 Domain of unknown function (DUF1996) 40 265 6.4E-39 T 29-03-2018 IPR018535 Domain of unknown function DUF1996 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 171 1.8E-17 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 PIRSF PIRSF001435 2 213 5.0E-40 T 29-03-2018 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 Hamap MF_00942 Endonuclease III [nth]. 1 213 30.964 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 Gene3D G3DSA:1.10.340.30 23 119 3.1E-22 T 29-03-2018 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 Gene3D G3DSA:1.10.1670.10 120 216 5.0E-23 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 SUPERFAMILY SSF48150 4 209 3.45E-53 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CKQ55_RS31320 9844f4d72169fab4117fa8adb61ee946 232 SMART SM00478 40 188 1.6E-43 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CKQ55_RS07350 59bfbb876541561e49f43fdd517bebfd 256 Gene3D G3DSA:3.60.110.10 2 254 4.8E-55 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS07350 59bfbb876541561e49f43fdd517bebfd 256 SUPERFAMILY SSF56317 4 249 3.01E-60 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS07350 59bfbb876541561e49f43fdd517bebfd 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 3.1E-30 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CKQ55_RS07350 59bfbb876541561e49f43fdd517bebfd 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CKQ55_RS13710 193551c334537d6ab32739c47fce1a80 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS13710 193551c334537d6ab32739c47fce1a80 78 SUPERFAMILY SSF143800 2 77 1.26E-29 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13710 193551c334537d6ab32739c47fce1a80 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS13710 193551c334537d6ab32739c47fce1a80 78 Gene3D G3DSA:2.30.170.40 2 75 3.3E-28 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS13710 193551c334537d6ab32739c47fce1a80 78 Pfam PF00830 Ribosomal L28 family 3 62 1.9E-25 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS16410 45f57f6506304b174a5a654c77a0b400 167 Pfam PF01863 Protein of unknown function DUF45 93 149 3.1E-11 T 29-03-2018 IPR002725 Protein of unknown function DUF45 CKQ55_RS14330 c07892a556ea1c24330217be46c784e4 343 Pfam PF03631 Virulence factor BrkB 72 331 4.6E-48 T 29-03-2018 IPR017039 Virulence factor BrkB CKQ55_RS14330 c07892a556ea1c24330217be46c784e4 343 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 58 332 1.4E-127 T 29-03-2018 IPR005274 Inner membrane protein YhjD CKQ55_RS14330 c07892a556ea1c24330217be46c784e4 343 PIRSF PIRSF035875 43 340 4.1E-25 T 29-03-2018 IPR017039 Virulence factor BrkB CKQ55_RS28815 24530b9ef0d8f8aafbf5ccf492d052ff 144 SUPERFAMILY SSF54427 5 136 4.4E-28 T 29-03-2018 IPR032710 NTF2-like domain CKQ55_RS28815 24530b9ef0d8f8aafbf5ccf492d052ff 144 Pfam PF12680 SnoaL-like domain 13 113 5.0E-20 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CKQ55_RS28815 24530b9ef0d8f8aafbf5ccf492d052ff 144 Gene3D G3DSA:3.10.450.50 2 126 9.8E-27 T 29-03-2018 CKQ55_RS16805 531f439d398483773f7b6fd2a9b86bf3 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 1.2E-41 T 29-03-2018 IPR009659 Protein of unknown function DUF1249 CKQ55_RS26425 77a0b66fe4ab4cb91e97af767b70ad9e 299 Pfam PF00892 EamA-like transporter family 7 131 4.6E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS26425 77a0b66fe4ab4cb91e97af767b70ad9e 299 Pfam PF00892 EamA-like transporter family 144 286 4.7E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS26425 77a0b66fe4ab4cb91e97af767b70ad9e 299 SUPERFAMILY SSF103481 41 132 2.75E-11 T 29-03-2018 CKQ55_RS26425 77a0b66fe4ab4cb91e97af767b70ad9e 299 SUPERFAMILY SSF103481 181 287 1.83E-9 T 29-03-2018 CKQ55_RS19500 4eebc10adc8f03a9bc6356e8dc97a630 148 SMART SM01235 16 148 1.4E-36 T 29-03-2018 IPR025992 Haem-binding domain CKQ55_RS19500 4eebc10adc8f03a9bc6356e8dc97a630 148 Pfam PF14376 Haem-binding domain 18 147 3.6E-31 T 29-03-2018 IPR025992 Haem-binding domain CKQ55_RS28480 eecbc19209bf264b38b08c325ab54e2b 679 Pfam PF04632 Fusaric acid resistance protein family 34 672 1.7E-159 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CKQ55_RS22315 ba2b37fd963f7e91cdfec9ffaa6f559f 143 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 3 138 2.3E-40 T 29-03-2018 IPR020000 Bacteriophage P2, LysB CKQ55_RS03645 e1ea9a48e68eb3d83df989c4f6fe3ef2 456 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 72 308 1.6E-18 T 29-03-2018 IPR010839 Acyclic terpene utilisation CKQ55_RS00295 8e1b3045ad9d0200c415bc1b373afd87 81 ProDom PD865026 ORF80 HKBM GENE GP15-GP3 ORF46 ORF-118 1 73 3.0E-7 T 29-03-2018 IPR022544 Bacteriophage P22, Orf80 CKQ55_RS00295 8e1b3045ad9d0200c415bc1b373afd87 81 Pfam PF10834 Protein of unknown function (DUF2560) 3 73 1.3E-19 T 29-03-2018 IPR022544 Bacteriophage P22, Orf80 CKQ55_RS21885 7242aa9d37072b401c688de84de058f2 189 Pfam PF09335 SNARE associated Golgi protein 23 144 5.0E-21 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS07200 8869b4710ed567ff5bf9bf61fdda0cdf 428 Pfam PF10082 Putative beta-barrel porin 2 233 397 2.8E-9 T 29-03-2018 IPR018759 Putative beta-barrel porin 2 CKQ55_RS07200 8869b4710ed567ff5bf9bf61fdda0cdf 428 Gene3D G3DSA:2.40.160.10 4 314 0.14 T 29-03-2018 CKQ55_RS07200 8869b4710ed567ff5bf9bf61fdda0cdf 428 Gene3D G3DSA:2.40.160.10 315 428 1.5E-4 T 29-03-2018 CKQ55_RS13220 7c3fce86d5ba97a843c6abdd33229cb0 31 Pfam PF08049 IlvB leader peptide 1 31 2.5E-15 T 29-03-2018 IPR012566 IlvB leader peptide CKQ55_RS00885 15e60d7d078af0b6b6f5b43ff41adc7b 84 Pfam PF13991 BssS protein family 11 81 1.4E-33 T 29-03-2018 IPR025730 Biofilm regulator BssS CKQ55_RS00885 15e60d7d078af0b6b6f5b43ff41adc7b 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 3.0E-38 T 29-03-2018 IPR025730 Biofilm regulator BssS CKQ55_RS30625 7d395bb9b83cdf09ac7e42a1d1b1cca6 198 Pfam PF07296 TraP protein 7 185 3.3E-80 T 29-03-2018 IPR009913 TraP CKQ55_RS20500 59d03af7787cee81d1595a7939a336ad 279 Pfam PF14450 Cell division protein FtsA 142 246 8.8E-8 T 29-03-2018 CKQ55_RS20500 59d03af7787cee81d1595a7939a336ad 279 Gene3D G3DSA:3.30.420.150 145 258 2.7E-13 T 29-03-2018 CKQ55_RS20500 59d03af7787cee81d1595a7939a336ad 279 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 34 268 2.5E-109 T 29-03-2018 IPR013366 Ethanolamine utilisation EutJ CKQ55_RS20500 59d03af7787cee81d1595a7939a336ad 279 SUPERFAMILY SSF53067 31 132 8.78E-11 T 29-03-2018 CKQ55_RS20500 59d03af7787cee81d1595a7939a336ad 279 SUPERFAMILY SSF53067 141 260 1.1E-19 T 29-03-2018 CKQ55_RS20500 59d03af7787cee81d1595a7939a336ad 279 Gene3D G3DSA:3.30.420.40 6 144 1.1E-14 T 29-03-2018 CKQ55_RS13615 78b826fe935fc39e0c5242da76151328 199 Pfam PF07305 Protein of unknown function (DUF1454) 19 192 4.2E-82 T 29-03-2018 IPR009918 Protein of unknown function DUF1454 CKQ55_RS17170 7fc053144c0d6982f99dcf3d0e805531 235 SUPERFAMILY SSF54060 26 230 1.29E-87 T 29-03-2018 CKQ55_RS17170 7fc053144c0d6982f99dcf3d0e805531 235 Pfam PF04231 Endonuclease I 45 229 1.4E-46 T 29-03-2018 IPR007346 Endonuclease I GO:0004518 CKQ55_RS01880 16f0dc236dbeabdfed6dbe254e795656 148 Pfam PF03733 Inner membrane component domain 4 53 1.9E-9 T 29-03-2018 IPR005185 Inner membrane component domain CKQ55_RS01880 16f0dc236dbeabdfed6dbe254e795656 148 Pfam PF03733 Inner membrane component domain 77 127 2.3E-18 T 29-03-2018 IPR005185 Inner membrane component domain CKQ55_RS01880 16f0dc236dbeabdfed6dbe254e795656 148 PIRSF PIRSF028777 1 139 1.3E-54 T 29-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 CKQ55_RS14585 64abcc30f9e7772b6ea56a429f2f410d 300 Gene3D G3DSA:3.20.20.370 2 268 8.0E-28 T 29-03-2018 CKQ55_RS14585 64abcc30f9e7772b6ea56a429f2f410d 300 SUPERFAMILY SSF88713 85 267 6.99E-27 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS14585 64abcc30f9e7772b6ea56a429f2f410d 300 SUPERFAMILY SSF88713 14 41 6.99E-27 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CKQ55_RS14585 64abcc30f9e7772b6ea56a429f2f410d 300 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 62.479 T 29-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 CKQ55_RS14585 64abcc30f9e7772b6ea56a429f2f410d 300 Pfam PF01522 Polysaccharide deacetylase 15 167 1.3E-9 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CKQ55_RS16875 8fddafacbd0f0812456dc6da6cdef66a 151 Gene3D G3DSA:3.30.428.10 1 151 1.1E-28 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS16875 8fddafacbd0f0812456dc6da6cdef66a 151 PRINTS PR00332 Histidine triad family signature 25 43 7.2E-7 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS16875 8fddafacbd0f0812456dc6da6cdef66a 151 PRINTS PR00332 Histidine triad family signature 4 20 7.2E-7 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS16875 8fddafacbd0f0812456dc6da6cdef66a 151 SUPERFAMILY SSF54197 1 150 5.1E-29 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CKQ55_RS16875 8fddafacbd0f0812456dc6da6cdef66a 151 Pfam PF01230 HIT domain 11 77 3.8E-10 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CKQ55_RS13920 04d91bceffb37a63c00dd32b005be8e9 653 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 12 560 1.2E-169 T 29-03-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CKQ55_RS13920 04d91bceffb37a63c00dd32b005be8e9 653 SUPERFAMILY SSF48208 16 426 2.24E-38 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS13920 04d91bceffb37a63c00dd32b005be8e9 653 Gene3D G3DSA:1.50.10.20 27 186 1.6E-11 T 29-03-2018 CKQ55_RS13920 04d91bceffb37a63c00dd32b005be8e9 653 Gene3D G3DSA:1.50.10.20 187 347 6.4E-33 T 29-03-2018 CKQ55_RS27160 c6032e65b17fbd232771913eb1ffb543 417 Pfam PF13343 Bacterial extracellular solute-binding protein 79 324 1.1E-34 T 29-03-2018 CKQ55_RS27160 c6032e65b17fbd232771913eb1ffb543 417 Gene3D G3DSA:3.40.190.10 128 293 1.2E-24 T 29-03-2018 CKQ55_RS27160 c6032e65b17fbd232771913eb1ffb543 417 SUPERFAMILY SSF53850 27 331 2.04E-43 T 29-03-2018 CKQ55_RS21875 bfcd042e5327f2da76329b0ea2f829a3 244 Pfam PF08241 Methyltransferase domain 47 141 2.7E-21 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CKQ55_RS21875 bfcd042e5327f2da76329b0ea2f829a3 244 Gene3D G3DSA:3.40.50.150 26 242 3.5E-47 T 29-03-2018 CKQ55_RS21875 bfcd042e5327f2da76329b0ea2f829a3 244 SUPERFAMILY SSF53335 5 234 2.76E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS13300 a06a1dc1a8da50396e6013a93f68e986 286 TIGRFAM TIGR03226 PhnU: 2-aminoethylphosphonate ABC transporter, permease protein 9 286 1.2E-133 T 29-03-2018 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU GO:0016020|GO:0033223 CKQ55_RS13300 a06a1dc1a8da50396e6013a93f68e986 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 281 2.7E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS13300 a06a1dc1a8da50396e6013a93f68e986 286 SUPERFAMILY SSF161098 15 277 6.35E-50 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS13300 a06a1dc1a8da50396e6013a93f68e986 286 Gene3D G3DSA:1.10.3720.10 16 286 7.7E-45 T 29-03-2018 CKQ55_RS25175 5165553617cf5641a17af97dbc71d7f8 510 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 87 507 2.5E-166 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ55_RS25175 5165553617cf5641a17af97dbc71d7f8 510 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 55 507 2.0E-199 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ55_RS25175 5165553617cf5641a17af97dbc71d7f8 510 Gene3D G3DSA:3.90.210.10 265 370 0.044 T 29-03-2018 CKQ55_RS31145 a5b08ff73dbba0911e28a714eb37296b 209 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 93 174 2.5E-18 T 29-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CKQ55_RS31145 a5b08ff73dbba0911e28a714eb37296b 209 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 92 204 2.6E-32 T 29-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CKQ55_RS26900 d1dbd8d98c65723f28e5d90ee92046e4 72 Pfam PF04325 Protein of unknown function (DUF465) 19 66 6.7E-14 T 29-03-2018 IPR007420 Protein of unknown function DUF465 CKQ55_RS10350 175fe400a53ba1d38889d6a43b9c2cf4 327 Pfam PF00892 EamA-like transporter family 7 126 2.4E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS10350 175fe400a53ba1d38889d6a43b9c2cf4 327 SUPERFAMILY SSF103481 47 146 2.81E-9 T 29-03-2018 CKQ55_RS09470 7b86669757c788e6cd34586c37ae3d64 447 Pfam PF03573 outer membrane porin, OprD family 45 384 8.1E-17 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CKQ55_RS09470 7b86669757c788e6cd34586c37ae3d64 447 Gene3D G3DSA:2.40.160.10 1 447 3.5E-61 T 29-03-2018 CKQ55_RS31605 0ed8732f5cb9e728b964dff858e8bbdd 256 SUPERFAMILY SSF101082 22 221 2.88E-25 T 29-03-2018 IPR023220 Type IV secretion system, VirB5-domain CKQ55_RS31605 0ed8732f5cb9e728b964dff858e8bbdd 256 Pfam PF07996 Type IV secretion system proteins 37 215 3.8E-27 T 29-03-2018 IPR014158 Type IV secretion system, VirB5 CKQ55_RS31605 0ed8732f5cb9e728b964dff858e8bbdd 256 Gene3D G3DSA:1.20.58.430 22 230 4.3E-21 T 29-03-2018 CKQ55_RS00070 2f5f64691be9bcf176b4c27be2f404d4 175 Gene3D G3DSA:1.10.3210.10 1 175 9.8E-26 T 29-03-2018 CKQ55_RS00070 2f5f64691be9bcf176b4c27be2f404d4 175 SUPERFAMILY SSF109604 1 173 1.18E-42 T 29-03-2018 CKQ55_RS00440 2f5f64691be9bcf176b4c27be2f404d4 175 Gene3D G3DSA:1.10.3210.10 1 175 9.8E-26 T 29-03-2018 CKQ55_RS00440 2f5f64691be9bcf176b4c27be2f404d4 175 SUPERFAMILY SSF109604 1 173 1.18E-42 T 29-03-2018 CKQ55_RS01840 f12578e031be723e102a5405d0baa1ac 1047 Pfam PF00534 Glycosyl transferases group 1 847 999 3.4E-27 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CKQ55_RS01840 f12578e031be723e102a5405d0baa1ac 1047 Gene3D G3DSA:3.40.50.2000 812 1008 5.6E-35 T 29-03-2018 CKQ55_RS01840 f12578e031be723e102a5405d0baa1ac 1047 SUPERFAMILY SSF53756 740 1020 9.42E-49 T 29-03-2018 CKQ55_RS01840 f12578e031be723e102a5405d0baa1ac 1047 SUPERFAMILY SSF48208 251 418 4.34E-11 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CKQ55_RS01840 f12578e031be723e102a5405d0baa1ac 1047 Gene3D G3DSA:1.50.10.10 194 492 3.0E-20 T 29-03-2018 CKQ55_RS07385 14c698e0127537d6094dabac7d2c9eb0 256 SUPERFAMILY SSF53335 11 243 7.52E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS07385 14c698e0127537d6094dabac7d2c9eb0 256 Gene3D G3DSA:3.40.50.150 25 255 3.0E-46 T 29-03-2018 CKQ55_RS07385 14c698e0127537d6094dabac7d2c9eb0 256 Pfam PF08241 Methyltransferase domain 49 145 2.4E-26 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CKQ55_RS23840 2cb038b4e2dce6b6ab8b0210715c20b7 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 1.1E-33 T 29-03-2018 IPR009954 Protein of unknown function DUF1482 CKQ55_RS14195 3888eba01980a17fec8fbd44bd2509b1 192 Pfam PF17037 Cellulose biosynthesis protein BcsO 1 192 8.2E-16 T 29-03-2018 IPR031484 Cellulose biosynthesis protein BcsO CKQ55_RS28835 5c05a7e8736c5b5a3ccd837b9fe2edcc 407 Pfam PF02353 Mycolic acid cyclopropane synthetase 130 401 9.8E-87 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS28835 5c05a7e8736c5b5a3ccd837b9fe2edcc 407 Gene3D G3DSA:3.40.50.150 126 405 1.5E-65 T 29-03-2018 CKQ55_RS28835 5c05a7e8736c5b5a3ccd837b9fe2edcc 407 PIRSF PIRSF003085 23 407 1.3E-125 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CKQ55_RS28835 5c05a7e8736c5b5a3ccd837b9fe2edcc 407 SUPERFAMILY SSF53335 18 359 1.06E-81 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS07310 fa6bd67ed528d4bb1310ffae453ae196 264 SMART SM00900 149 247 4.6E-32 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CKQ55_RS07310 fa6bd67ed528d4bb1310ffae453ae196 264 PIRSF PIRSF009437 2 262 2.6E-100 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CKQ55_RS07310 fa6bd67ed528d4bb1310ffae453ae196 264 Pfam PF04205 FMN-binding domain 149 243 1.7E-14 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CKQ55_RS07310 fa6bd67ed528d4bb1310ffae453ae196 264 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 7 255 4.4E-95 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CKQ55_RS07310 fa6bd67ed528d4bb1310ffae453ae196 264 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 8 259 35.946 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CKQ55_RS12445 ae93548cc5a8637c4b9c1e4d6e3dbb74 90 Pfam PF07119 Protein of unknown function (DUF1375) 10 79 9.0E-14 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 CKQ55_RS29690 0550e142d59122eb735ddf84f26aa1a5 160 Pfam PF07813 LTXXQ motif family protein 44 140 4.1E-24 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CKQ55_RS29690 0550e142d59122eb735ddf84f26aa1a5 160 PIRSF PIRSF034445 1 150 4.2E-30 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CKQ55_RS10420 6b23684b5a1b7e763bad22d248ee02d6 284 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 4.2E-34 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS10420 6b23684b5a1b7e763bad22d248ee02d6 284 SUPERFAMILY SSF51658 21 272 2.49E-58 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CKQ55_RS10420 6b23684b5a1b7e763bad22d248ee02d6 284 Gene3D G3DSA:3.20.20.150 1 284 3.6E-62 T 29-03-2018 CKQ55_RS10420 6b23684b5a1b7e763bad22d248ee02d6 284 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 6 281 2.1E-151 T 29-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CKQ55_RS00960 cd5b0c4724da2faf5246f4a5c9db4250 163 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 1.4E-38 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 CKQ55_RS08860 02e716793783e5bdb89ce760475eaeb6 100 Pfam PF07256 Protein of unknown function (DUF1435) 22 96 1.0E-30 T 29-03-2018 IPR009885 Protein of unknown function DUF1435 CKQ55_RS08860 02e716793783e5bdb89ce760475eaeb6 100 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 22 97 3.0E-24 T 29-03-2018 IPR009885 Protein of unknown function DUF1435 CKQ55_RS08445 82605169f10933eb1dc49a8ee5a14e92 289 PIRSF PIRSF015582 1 289 1.1E-75 T 29-03-2018 IPR011206 Citrate lyase beta subunit-like CKQ55_RS08445 82605169f10933eb1dc49a8ee5a14e92 289 SUPERFAMILY SSF51621 2 233 5.23E-62 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS08445 82605169f10933eb1dc49a8ee5a14e92 289 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 2 287 3.3E-153 T 29-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CKQ55_RS08445 82605169f10933eb1dc49a8ee5a14e92 289 Gene3D G3DSA:3.20.20.360 1 262 1.8E-51 T 29-03-2018 CKQ55_RS08445 82605169f10933eb1dc49a8ee5a14e92 289 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 223 5.3E-78 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CKQ55_RS23580 3058a6dee913e8afcd86db5a763e313e 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 313 6.9E-44 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23580 3058a6dee913e8afcd86db5a763e313e 326 Gene3D G3DSA:1.10.3470.10 37 319 5.6E-34 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS07485 609171d29a84107cea58fe47cc0d725a 233 Pfam PF17185 NlpE C-terminal OB domain 143 231 8.7E-31 T 29-03-2018 IPR033450 NlpE, C-terminal OB domain CKQ55_RS07485 609171d29a84107cea58fe47cc0d725a 233 Pfam PF04170 NlpE N-terminal domain 44 128 2.0E-26 T 29-03-2018 IPR007298 Copper resistance lipoprotein NlpE CKQ55_RS13050 47933358b34967b33891bd3878243750 85 Pfam PF01809 Haemolytic domain 10 75 7.0E-31 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CKQ55_RS13050 47933358b34967b33891bd3878243750 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 3.0E-20 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CKQ55_RS13050 47933358b34967b33891bd3878243750 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.446 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CKQ55_RS13050 47933358b34967b33891bd3878243750 85 SMART SM01234 8 75 8.2E-46 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CKQ55_RS13050 47933358b34967b33891bd3878243750 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 1.1E-32 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CKQ55_RS05200 071efa08dfc15665d42d5718aa9a28a7 204 Gene3D G3DSA:2.30.110.10 1 199 3.5E-49 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS05200 071efa08dfc15665d42d5718aa9a28a7 204 PIRSF PIRSF010372 1 201 1.4E-59 T 29-03-2018 IPR007396 Transcriptional regulator PAI 2-type CKQ55_RS05200 071efa08dfc15665d42d5718aa9a28a7 204 Pfam PF04299 Putative FMN-binding domain 1 157 3.5E-45 T 29-03-2018 IPR007396 Transcriptional regulator PAI 2-type CKQ55_RS05200 071efa08dfc15665d42d5718aa9a28a7 204 SUPERFAMILY SSF50475 11 183 6.21E-29 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CKQ55_RS28445 04575db9603c588e4bcbea3f064dcc36 229 Pfam PF08279 HTH domain 6 60 6.0E-15 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CKQ55_RS28445 04575db9603c588e4bcbea3f064dcc36 229 Gene3D G3DSA:1.10.10.10 1 63 6.9E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28445 04575db9603c588e4bcbea3f064dcc36 229 SUPERFAMILY SSF46785 1 62 1.02E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS28445 04575db9603c588e4bcbea3f064dcc36 229 Pfam PF13280 WYL domain 135 209 1.9E-14 T 29-03-2018 IPR026881 WYL domain CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 162 170 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 131 152 1.2E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 1.2E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 158 169 1.2E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.2E-39 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 SUPERFAMILY SSF56925 28 170 1.73E-30 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 Pfam PF13505 Outer membrane protein beta-barrel domain 11 170 1.6E-24 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CKQ55_RS03105 8075af79b16ab6f4349ea65fe638674c 170 Gene3D G3DSA:2.40.160.20 23 170 2.3E-21 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CKQ55_RS22995 20f676d0e333d0bd9ce08d08f4c7392c 165 Gene3D G3DSA:3.90.420.10 8 165 8.2E-22 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CKQ55_RS22995 20f676d0e333d0bd9ce08d08f4c7392c 165 Pfam PF00174 Oxidoreductase molybdopterin binding domain 62 139 1.2E-5 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CKQ55_RS22995 20f676d0e333d0bd9ce08d08f4c7392c 165 SUPERFAMILY SSF56524 31 164 8.63E-18 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CKQ55_RS29735 85f2614057a5f1334306db3d813e9ed6 232 Pfam PF09335 SNARE associated Golgi protein 76 193 5.8E-25 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS09545 12ae7c6eac54931df46043dbf936f837 281 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 1.2E-61 T 29-03-2018 IPR031339 Domain of unknown function DUF4942 CKQ55_RS18910 8e4b529b690092c5834deaec57827781 103 Gene3D G3DSA:1.10.10.10 40 103 3.0E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18910 8e4b529b690092c5834deaec57827781 103 SUPERFAMILY SSF46785 43 101 3.56E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS18910 8e4b529b690092c5834deaec57827781 103 Pfam PF04703 FaeA-like protein 57 94 9.1E-6 T 29-03-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 CKQ55_RS28595 b8c8905f5595955643f74331deba6f4d 883 Pfam PF11739 Dicarboxylate transport 661 862 8.0E-62 T 29-03-2018 IPR021730 Dicarboxylate transport CKQ55_RS20890 0042b5a4acd2c187a271baf6e4807a7f 92 Pfam PF08891 YfcL protein 4 87 3.0E-37 T 29-03-2018 IPR014987 Uncharacterised protein family YfcL CKQ55_RS20890 0042b5a4acd2c187a271baf6e4807a7f 92 Gene3D G3DSA:1.10.357.10 3 92 1.3E-4 T 29-03-2018 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 SUPERFAMILY SSF51445 5 460 1.43E-134 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 8.5E-11 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 365 373 8.5E-11 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 8.5E-11 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 293 307 8.5E-11 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 8.5E-11 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 Gene3D G3DSA:3.20.20.80 6 466 1.1E-118 T 29-03-2018 CKQ55_RS18020 040fac90442657683eab0cbba1ab2652 475 Pfam PF00232 Glycosyl hydrolase family 1 7 463 5.7E-104 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CKQ55_RS30895 5a8009ecdf5282e833a6817c9ac563a2 53 Pfam PF12759 InsA C-terminal domain 10 50 1.5E-27 T 29-03-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CKQ55_RS30895 5a8009ecdf5282e833a6817c9ac563a2 53 Gene3D G3DSA:1.10.10.10 7 52 6.8E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS23935 d0f16cec722d7d969b3112c35668cdfc 187 Pfam PF02659 Putative manganese efflux pump 31 181 5.8E-52 T 29-03-2018 IPR003810 Putative manganese efflux pump CKQ55_RS23935 d0f16cec722d7d969b3112c35668cdfc 187 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.367 T 29-03-2018 IPR022929 Putative manganese efflux pump MntP CKQ55_RS01945 cdb08d0e0c04ad7b9d567d8347012520 422 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 1.5E-176 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CKQ55_RS01945 cdb08d0e0c04ad7b9d567d8347012520 422 Pfam PF04403 Paraquat-inducible protein A 49 200 4.4E-38 T 29-03-2018 IPR007498 Paraquat-inducible protein A CKQ55_RS01945 cdb08d0e0c04ad7b9d567d8347012520 422 Pfam PF04403 Paraquat-inducible protein A 253 408 2.4E-54 T 29-03-2018 IPR007498 Paraquat-inducible protein A CKQ55_RS03110 acc8eccb927316811d2bb9a4dc7c4edc 295 Pfam PF00892 EamA-like transporter family 148 277 3.5E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS03110 acc8eccb927316811d2bb9a4dc7c4edc 295 SUPERFAMILY SSF103481 184 278 1.63E-9 T 29-03-2018 CKQ55_RS03110 acc8eccb927316811d2bb9a4dc7c4edc 295 SUPERFAMILY SSF103481 46 136 1.57E-6 T 29-03-2018 CKQ55_RS12650 b58827631fcd0778b9bd1d6675a33317 70 SUPERFAMILY SSF159871 2 69 3.53E-14 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS12650 b58827631fcd0778b9bd1d6675a33317 70 Pfam PF07338 Protein of unknown function (DUF1471) 23 68 3.6E-10 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS12650 b58827631fcd0778b9bd1d6675a33317 70 Gene3D G3DSA:3.30.1660.10 9 70 6.7E-15 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS29455 a2da191bab40c66a60d0b9ad18a6e542 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 1.1E-42 T 29-03-2018 IPR019633 Protein of unknown function DUF2498 CKQ55_RS15935 72fb79e89d54c8326d9a3b54e045e1f8 188 PIRSF PIRSF006118 13 188 8.8E-75 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS15935 72fb79e89d54c8326d9a3b54e045e1f8 188 Gene3D G3DSA:3.40.50.1000 4 188 1.8E-27 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15935 72fb79e89d54c8326d9a3b54e045e1f8 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 162 2.7E-10 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15935 72fb79e89d54c8326d9a3b54e045e1f8 188 SUPERFAMILY SSF56784 22 181 1.4E-42 T 29-03-2018 IPR023214 HAD-like domain CKQ55_RS15935 72fb79e89d54c8326d9a3b54e045e1f8 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 3.4E-74 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CKQ55_RS13190 3f8fd4e63696043ac96b4b4f63294b59 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 445 3.2E-167 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS13190 3f8fd4e63696043ac96b4b4f63294b59 445 Pfam PF02447 GntP family permease 7 444 2.0E-159 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS13190 3f8fd4e63696043ac96b4b4f63294b59 445 PIRSF PIRSF002746 2 445 3.9E-143 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS25140 6b27ef67a38ff45a5a6aa4b1d671f24b 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 248 9.3E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS25140 6b27ef67a38ff45a5a6aa4b1d671f24b 255 Gene3D G3DSA:1.10.3720.10 2 254 1.5E-45 T 29-03-2018 CKQ55_RS25140 6b27ef67a38ff45a5a6aa4b1d671f24b 255 SUPERFAMILY SSF161098 14 234 6.28E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02870 0c30dc085c23d6f953d8b54badcb71fe 197 Pfam PF05766 Bacteriophage Lambda NinG protein 4 192 2.6E-50 T 29-03-2018 IPR008713 Bacteriophage lambda NinG CKQ55_RS00265 2cfbe3be85f354557fcebd658329edf6 235 Gene3D G3DSA:3.20.16.10 20 195 1.1E-40 T 29-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain CKQ55_RS00265 2cfbe3be85f354557fcebd658329edf6 235 Pfam PF04586 Caudovirus prohead serine protease 15 169 1.4E-41 T 29-03-2018 IPR006433 Prohead protease CKQ55_RS00265 2cfbe3be85f354557fcebd658329edf6 235 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 24 164 5.5E-35 T 29-03-2018 IPR006433 Prohead protease CKQ55_RS05595 4f1f4504b32fbc410061afc70bab894d 258 Pfam PF06992 Replication protein P 36 202 1.0E-33 T 29-03-2018 IPR009731 Replication P GO:0006270 CKQ55_RS27965 9d8828c32380cd2f0fbca65a7570e697 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 143 2.7E-19 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ CKQ55_RS02755 a8c1aff2963efd4225016e7922591e2e 141 Gene3D G3DSA:2.30.30.140 25 116 0.0011 T 29-03-2018 CKQ55_RS19230 41c86b945449634d4e4ab5e29b4661c5 287 SUPERFAMILY SSF81345 5 268 6.8E-19 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS19230 41c86b945449634d4e4ab5e29b4661c5 287 Pfam PF00950 ABC 3 transport family 13 272 1.6E-52 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CKQ55_RS19230 41c86b945449634d4e4ab5e29b4661c5 287 Gene3D G3DSA:1.10.3470.10 4 280 5.2E-21 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 SUPERFAMILY SSF46785 20 86 7.03E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 Gene3D G3DSA:3.90.1150.10 390 490 2.3E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 SMART SM00345 25 84 2.5E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 Pfam PF00155 Aminotransferase class I and II 157 455 4.6E-21 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 Gene3D G3DSA:3.40.640.10 145 389 4.3E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 SUPERFAMILY SSF53383 80 487 1.03E-81 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 3.3E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CKQ55_RS14770 d828605de98a64678ce4d3eafe2bc895 504 Gene3D G3DSA:1.10.10.10 12 86 1.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS06455 6c8a4be83cbea9b27f1b6671d4776f8f 464 Pfam PF13163 Protein of unknown function (DUF3999) 31 453 1.6E-107 T 29-03-2018 IPR025060 Protein of unknown function DUF3999 CKQ55_RS04925 9e767c48c9897557a4f33b9ee3028e45 132 Pfam PF00293 NUDIX domain 7 111 1.1E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CKQ55_RS04925 9e767c48c9897557a4f33b9ee3028e45 132 Gene3D G3DSA:3.90.79.10 2 130 1.7E-18 T 29-03-2018 CKQ55_RS04925 9e767c48c9897557a4f33b9ee3028e45 132 SUPERFAMILY SSF55811 4 129 1.76E-21 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CKQ55_RS04925 9e767c48c9897557a4f33b9ee3028e45 132 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CKQ55_RS24620 ade919517e0f19f8bf4809a1fac13ffc 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.1E-81 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CKQ55_RS24620 ade919517e0f19f8bf4809a1fac13ffc 215 Pfam PF01914 MarC family integral membrane protein 8 210 1.5E-73 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CKQ55_RS29870 5bea85ced8b4ff297a150013bd3fe6d3 114 Pfam PF01844 HNH endonuclease 27 75 9.7E-12 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CKQ55_RS29870 5bea85ced8b4ff297a150013bd3fe6d3 114 SMART SM00507 15 70 1.4E-5 T 29-03-2018 IPR003615 HNH nuclease CKQ55_RS29870 5bea85ced8b4ff297a150013bd3fe6d3 114 Gene3D G3DSA:3.40.1800.10 6 85 1.9E-7 T 29-03-2018 CKQ55_RS10225 5e21e4582244704bd428283e87a0ce70 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 369 1.2E-112 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CKQ55_RS10225 5e21e4582244704bd428283e87a0ce70 380 Gene3D G3DSA:1.20.1090.10 184 380 1.2E-60 T 29-03-2018 CKQ55_RS10225 5e21e4582244704bd428283e87a0ce70 380 Gene3D G3DSA:3.40.50.1970 1 183 1.2E-43 T 29-03-2018 CKQ55_RS10225 5e21e4582244704bd428283e87a0ce70 380 SUPERFAMILY SSF56796 5 379 2.49E-112 T 29-03-2018 CKQ55_RS10225 5e21e4582244704bd428283e87a0ce70 380 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS10225 5e21e4582244704bd428283e87a0ce70 380 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CKQ55_RS14630 654412bf207a9782f7102544f3ec2385 194 Pfam PF11659 Protein of unknown function (DUF3261) 55 191 5.9E-36 T 29-03-2018 IPR021675 Protein of unknown function DUF3261 CKQ55_RS26830 041766c681c9bd956b9c19a34e7196be 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 315 1.6E-53 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS26830 041766c681c9bd956b9c19a34e7196be 339 Gene3D G3DSA:1.10.3470.10 43 318 4.7E-37 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS29135 ea0ae282b2eaebc6429223df632da6a4 231 SUPERFAMILY SSF161098 16 211 2.62E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29135 ea0ae282b2eaebc6429223df632da6a4 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 120 3.4E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS29135 ea0ae282b2eaebc6429223df632da6a4 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 224 2.0E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS29135 ea0ae282b2eaebc6429223df632da6a4 231 Gene3D G3DSA:1.10.3720.10 2 231 7.4E-37 T 29-03-2018 CKQ55_RS08250 778e8d10851c70683ddbb8c1bf4ecabd 251 ProSitePatterns PS01028 Dehydroquinase class I active site. 115 145 - T 29-03-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CKQ55_RS08250 778e8d10851c70683ddbb8c1bf4ecabd 251 SUPERFAMILY SSF51569 4 250 1.44E-81 T 29-03-2018 CKQ55_RS08250 778e8d10851c70683ddbb8c1bf4ecabd 251 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 19 246 1.4E-80 T 29-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CKQ55_RS08250 778e8d10851c70683ddbb8c1bf4ecabd 251 Gene3D G3DSA:3.20.20.70 2 251 1.8E-87 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS08250 778e8d10851c70683ddbb8c1bf4ecabd 251 Pfam PF01487 Type I 3-dehydroquinase 20 246 3.3E-74 T 29-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CKQ55_RS08250 778e8d10851c70683ddbb8c1bf4ecabd 251 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 18 250 39.807 T 29-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CKQ55_RS16510 0841cd1aa0e574f29a89c3bbdc0a4c62 477 PIRSF PIRSF006060 1 477 3.1E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS16510 0841cd1aa0e574f29a89c3bbdc0a4c62 477 Pfam PF13520 Amino acid permease 11 439 1.4E-25 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS22840 e6fcc8d457eba0c8ddda3b2099a34a4b 156 SUPERFAMILY SSF53146 14 122 4.84E-25 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CKQ55_RS22840 e6fcc8d457eba0c8ddda3b2099a34a4b 156 Gene3D G3DSA:3.30.420.130 11 133 1.7E-23 T 29-03-2018 CKQ55_RS22840 e6fcc8d457eba0c8ddda3b2099a34a4b 156 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 29 118 3.8E-14 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CKQ55_RS31090 ef45ad6129a803f40d4ed6f9c62e93e9 247 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 12 237 1.6E-59 T 29-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK CKQ55_RS31090 ef45ad6129a803f40d4ed6f9c62e93e9 247 Pfam PF06586 TraK protein 19 235 1.5E-43 T 29-03-2018 IPR010563 Pilus assembly TraK CKQ55_RS24090 9cb9442657d22c91c0f8cc76340720f7 153 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 2.4E-8 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CKQ55_RS24090 9cb9442657d22c91c0f8cc76340720f7 153 PIRSF PIRSF006173 4 150 4.9E-69 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CKQ55_RS24090 9cb9442657d22c91c0f8cc76340720f7 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 150 42.246 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CKQ55_RS30575 69a066db79cf37ce63fffa21cde8e4bd 330 Pfam PF06834 TraU protein 28 328 1.2E-116 T 29-03-2018 IPR009649 TraU CKQ55_RS14780 0bc580b72a259e01d23c6fb84c02c740 414 Pfam PF03222 Tryptophan/tyrosine permease family 23 387 3.2E-31 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CKQ55_RS19345 4df72330221d54bddf7ff5a46b5d2d7a 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 3.0E-15 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CKQ55_RS30525 4a19125cfcbdc05e6cb63752e32404a5 456 Pfam PF06122 Conjugative relaxosome accessory transposon protein 29 377 1.0E-115 T 29-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CKQ55_RS05435 45cf0d667d73f75abbba6fc627c761cf 146 Pfam PF11681 Protein of unknown function (DUF3277) 1 144 4.6E-70 T 29-03-2018 IPR021695 Bacteriophage rv5, Orf52 CKQ55_RS01315 c035d49dc3ea5e30b21b26038b3a327a 62 Pfam PF13318 Protein of unknown function (DUF4089) 11 60 1.2E-20 T 29-03-2018 IPR025148 Protein of unknown function DUF4089 CKQ55_RS21565 6210b7b1730b387316282b371f107549 367 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 325 1.6E-69 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CKQ55_RS21565 6210b7b1730b387316282b371f107549 367 Pfam PF06996 Type VI secretion, TssG 26 325 5.1E-77 T 29-03-2018 IPR010732 Type VI secretion, TssG-like CKQ55_RS18900 62d93336369725b687fcdac48a293eec 161 Pfam PF15941 FidL-like putative membrane protein 69 154 1.6E-6 T 29-03-2018 IPR031854 Putative membrane protein FidL-like CKQ55_RS29505 ced82a5b10684b2ee91d7345e26d2c20 289 Gene3D G3DSA:3.20.20.140 9 265 6.5E-40 T 29-03-2018 CKQ55_RS29505 ced82a5b10684b2ee91d7345e26d2c20 289 SUPERFAMILY SSF89550 172 282 5.36E-50 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CKQ55_RS29505 ced82a5b10684b2ee91d7345e26d2c20 289 SUPERFAMILY SSF89550 9 90 5.36E-50 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CKQ55_RS29505 ced82a5b10684b2ee91d7345e26d2c20 289 Pfam PF02811 PHP domain 11 178 1.5E-9 T 29-03-2018 IPR004013 PHP domain GO:0003824 CKQ55_RS29505 ced82a5b10684b2ee91d7345e26d2c20 289 SMART SM00481 10 77 2.9E-18 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CKQ55_RS30655 7c6c3b527c14f50e6608d4931efb8497 55 Pfam PF05509 TraY domain 1 48 4.6E-24 T 29-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 CKQ55_RS22495 94f07f1f9808644480b9ac93ede0160f 312 SUPERFAMILY SSF161098 95 294 3.92E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22495 94f07f1f9808644480b9ac93ede0160f 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 311 4.7E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS22495 94f07f1f9808644480b9ac93ede0160f 312 Gene3D G3DSA:1.10.3720.10 1 300 8.2E-43 T 29-03-2018 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 8.3E-51 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 8.3E-51 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 8.3E-51 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 8.3E-51 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 8.3E-51 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 8.3E-51 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 Pfam PF01235 Sodium:alanine symporter family 52 453 8.9E-145 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS08650 d0e2d857a364cf4b0d05d5887239a563 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.7E-155 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CKQ55_RS09600 6a684cc44e2f4fc33ef2bc2204a7bdab 80 Gene3D G3DSA:1.10.10.10 33 78 6.5E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09600 6a684cc44e2f4fc33ef2bc2204a7bdab 80 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 18 73 1.5E-19 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CKQ55_RS09600 6a684cc44e2f4fc33ef2bc2204a7bdab 80 Gene3D G3DSA:1.10.10.60 7 32 1.9E-4 T 29-03-2018 CKQ55_RS11735 f8035d3276b910732568738a33a7598e 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.9 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CKQ55_RS11735 f8035d3276b910732568738a33a7598e 83 Pfam PF02416 mttA/Hcf106 family 4 50 5.2E-15 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CKQ55_RS11735 f8035d3276b910732568738a33a7598e 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 3.5E-22 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CKQ55_RS21715 49504c113fd675c9806884134d731003 311 Gene3D G3DSA:3.40.1790.10 6 311 4.4E-138 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CKQ55_RS21715 49504c113fd675c9806884134d731003 311 Pfam PF04227 Indigoidine synthase A like protein 16 306 6.5E-132 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CKQ55_RS21715 49504c113fd675c9806884134d731003 311 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 309 43.616 T 29-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CKQ55_RS21715 49504c113fd675c9806884134d731003 311 SUPERFAMILY SSF110581 9 307 7.98E-117 T 29-03-2018 CKQ55_RS30185 2cfac2a395f46e916ad2482f7bb76774 67 SUPERFAMILY SSF68989 1 67 3.66E-30 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS30185 2cfac2a395f46e916ad2482f7bb76774 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 3.4E-29 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS30185 2cfac2a395f46e916ad2482f7bb76774 67 Gene3D G3DSA:1.20.1280.40 1 66 3.7E-32 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CKQ55_RS18430 82c3c37894026827b1477cd084e160c5 74 SUPERFAMILY SSF50182 21 72 2.07E-20 T 29-03-2018 IPR010920 LSM domain CKQ55_RS18430 82c3c37894026827b1477cd084e160c5 74 Gene3D G3DSA:2.30.30.100 21 72 6.7E-32 T 29-03-2018 CKQ55_RS18430 82c3c37894026827b1477cd084e160c5 74 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 69 6.2E-25 T 29-03-2018 IPR010305 Protein of unknown function DUF903 CKQ55_RS26810 fc49e586100646f1f9af997656ff205c 183 Gene3D G3DSA:3.20.20.400 1 183 3.5E-54 T 29-03-2018 CKQ55_RS26810 fc49e586100646f1f9af997656ff205c 183 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 7 183 5.7E-48 T 29-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CKQ55_RS26810 fc49e586100646f1f9af997656ff205c 183 SUPERFAMILY SSF110391 7 183 1.57E-43 T 29-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CKQ55_RS26810 fc49e586100646f1f9af997656ff205c 183 PIRSF PIRSF016897 1 183 1.8E-43 T 29-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 CKQ55_RS27495 f96cb3dd6d82c5d43f6a54a3aef59988 210 Pfam PF01810 LysE type translocator 17 150 8.6E-24 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS28965 594593132fae22167e95a0711073e534 655 SUPERFAMILY SSF53474 214 289 4.69E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS28965 594593132fae22167e95a0711073e534 655 Gene3D G3DSA:3.40.50.1820 23 383 1.8E-15 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS24640 1316fae5252226c134df8577c9a05ba9 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 2.9E-13 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS24640 1316fae5252226c134df8577c9a05ba9 302 SUPERFAMILY SSF161098 100 283 1.83E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24640 1316fae5252226c134df8577c9a05ba9 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 1.4E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24640 1316fae5252226c134df8577c9a05ba9 302 Gene3D G3DSA:1.10.3720.10 28 291 9.6E-38 T 29-03-2018 CKQ55_RS27470 f1ac7c23d4311c618b60487aa4fb76ef 258 Gene3D G3DSA:3.40.50.300 1 226 5.5E-58 T 29-03-2018 CKQ55_RS27470 f1ac7c23d4311c618b60487aa4fb76ef 258 SMART SM00382 28 218 3.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CKQ55_RS27470 f1ac7c23d4311c618b60487aa4fb76ef 258 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CKQ55_RS27470 f1ac7c23d4311c618b60487aa4fb76ef 258 Pfam PF00005 ABC transporter 19 168 1.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CKQ55_RS27470 f1ac7c23d4311c618b60487aa4fb76ef 258 SUPERFAMILY SSF52540 3 219 5.58E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS18130 096bfc90509ac0dbf7a36d05c26731db 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 1.6E-19 T 29-03-2018 IPR022204 Prepilin peptidase dependent protein C CKQ55_RS21100 a9ad250ab750c498d2507ba0d5d11970 405 Gene3D G3DSA:3.40.640.10 53 280 9.0E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CKQ55_RS21100 a9ad250ab750c498d2507ba0d5d11970 405 SUPERFAMILY SSF53383 7 401 2.29E-95 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CKQ55_RS21100 a9ad250ab750c498d2507ba0d5d11970 405 Gene3D G3DSA:3.90.1150.10 281 405 4.2E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CKQ55_RS21100 a9ad250ab750c498d2507ba0d5d11970 405 Pfam PF00155 Aminotransferase class I and II 59 394 1.7E-46 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CKQ55_RS25960 3739e9a1c68c8e9b7ad9a5dfb838b216 187 SUPERFAMILY SSF160443 87 169 5.49E-10 T 29-03-2018 IPR002625 Smr domain CKQ55_RS25960 3739e9a1c68c8e9b7ad9a5dfb838b216 187 Pfam PF01713 Smr domain 89 169 1.3E-16 T 29-03-2018 IPR002625 Smr domain CKQ55_RS25960 3739e9a1c68c8e9b7ad9a5dfb838b216 187 SMART SM00463 85 169 3.1E-13 T 29-03-2018 IPR002625 Smr domain CKQ55_RS24015 d1c4bc21227605b94d692ebf9a2b78fe 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 272 1.2E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS24015 d1c4bc21227605b94d692ebf9a2b78fe 279 Gene3D G3DSA:1.10.3720.10 2 266 3.5E-44 T 29-03-2018 CKQ55_RS24015 d1c4bc21227605b94d692ebf9a2b78fe 279 SUPERFAMILY SSF161098 4 279 9.42E-67 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS15985 abcf99b8af943f0ed351a0bbe192af0b 90 Pfam PF13693 Winged helix-turn-helix DNA-binding 6 80 1.1E-34 T 29-03-2018 CKQ55_RS15985 abcf99b8af943f0ed351a0bbe192af0b 90 Gene3D G3DSA:1.10.260.40 1 72 7.8E-11 T 29-03-2018 CKQ55_RS15985 abcf99b8af943f0ed351a0bbe192af0b 90 SUPERFAMILY SSF47413 4 71 1.12E-28 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS14385 9592f89dde2237e25cbc20eaa59c606d 423 SUPERFAMILY SSF48317 104 310 2.49E-30 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS14385 9592f89dde2237e25cbc20eaa59c606d 423 Gene3D G3DSA:1.20.144.10 76 314 1.5E-31 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS14385 9592f89dde2237e25cbc20eaa59c606d 423 Pfam PF01569 PAP2 superfamily 183 284 3.9E-14 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS14385 9592f89dde2237e25cbc20eaa59c606d 423 SMART SM00014 173 292 1.9E-7 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CKQ55_RS10315 e7442dd6f64306e9d160987312f8bede 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 3.0E-29 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CKQ55_RS10315 e7442dd6f64306e9d160987312f8bede 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 7.2E-30 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CKQ55_RS10315 e7442dd6f64306e9d160987312f8bede 68 Gene3D G3DSA:3.30.1910.10 1 62 3.7E-31 T 29-03-2018 CKQ55_RS27050 3dcea242befc4e49fae719898ad2c819 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 319 1.1E-45 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS27050 3dcea242befc4e49fae719898ad2c819 336 Gene3D G3DSA:1.10.3470.10 42 328 7.7E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS17415 cce051f9938f058a6a19d4ea10c71e65 249 Pfam PF03609 PTS system sorbose-specific iic component 7 238 4.4E-74 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS07095 bd9de95abb71b846a06dcca6e5fdbe35 304 SUPERFAMILY SSF103481 190 292 1.07E-13 T 29-03-2018 CKQ55_RS07095 bd9de95abb71b846a06dcca6e5fdbe35 304 Pfam PF00892 EamA-like transporter family 9 136 4.8E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS07095 bd9de95abb71b846a06dcca6e5fdbe35 304 Pfam PF00892 EamA-like transporter family 150 289 4.5E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS07095 bd9de95abb71b846a06dcca6e5fdbe35 304 SUPERFAMILY SSF103481 39 137 1.09E-11 T 29-03-2018 CKQ55_RS26770 57f681235b0361277b8e945a3f1380cb 335 Pfam PF01032 FecCD transport family 18 332 2.0E-82 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CKQ55_RS26770 57f681235b0361277b8e945a3f1380cb 335 Gene3D G3DSA:1.10.3470.10 4 335 2.7E-65 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS26770 57f681235b0361277b8e945a3f1380cb 335 SUPERFAMILY SSF81345 6 332 6.28E-75 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CKQ55_RS26935 ed89f6e336f029d3a2c7331e49668dee 436 Pfam PF03611 PTS system sugar-specific permease component 14 401 1.3E-112 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CKQ55_RS02525 7fb42b514bffb983e194894ba3957b2d 892 Pfam PF13700 Domain of unknown function (DUF4158) 2 73 2.5E-16 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 CKQ55_RS02525 7fb42b514bffb983e194894ba3957b2d 892 Pfam PF01526 Tn3 transposase DDE domain 484 870 3.9E-157 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CKQ55_RS17230 c90ad0fbd12312c1802a618f13e8c6cf 235 Pfam PF02361 Cobalt transport protein 10 202 1.8E-5 T 29-03-2018 IPR003339 ABC/ECF transporter, transmembrane component CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 Pfam PF00119 ATP synthase A chain 46 265 6.6E-56 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 Gene3D G3DSA:1.20.120.220 95 271 2.5E-54 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 2.5E-44 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.166 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 SUPERFAMILY SSF81336 95 265 8.76E-50 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 4.6E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 4.6E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 4.6E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS12905 79eef92bea4225dbdcf373cfd074b0ce 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 6 128 5.5E-39 T 29-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 Gene3D G3DSA:2.60.120.330 3 338 3.4E-89 T 29-03-2018 IPR027443 Isopenicillin N synthase-like CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 176 273 1.3E-18 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 SUPERFAMILY SSF51197 2 282 1.79E-83 T 29-03-2018 CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 PRINTS PR00682 Isopenicillin N synthase signature 234 260 1.4E-12 T 29-03-2018 CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 PRINTS PR00682 Isopenicillin N synthase signature 27 44 1.4E-12 T 29-03-2018 CKQ55_RS26665 e2323404bf16623f62a1e98e03942b3e 342 PRINTS PR00682 Isopenicillin N synthase signature 198 219 1.4E-12 T 29-03-2018 CKQ55_RS07675 95ab8d3f92dc0fa524817a92a03616f7 207 Pfam PF03458 UPF0126 domain 4 78 5.6E-23 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CKQ55_RS07675 95ab8d3f92dc0fa524817a92a03616f7 207 Pfam PF03458 UPF0126 domain 92 163 4.5E-19 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CKQ55_RS00290 9a31faf4ddc779dbf327fa3557d66976 61 Gene3D G3DSA:2.20.25.10 1 39 1.0E-5 T 29-03-2018 CKQ55_RS00290 9a31faf4ddc779dbf327fa3557d66976 61 SUPERFAMILY SSF57783 3 46 1.36E-5 T 29-03-2018 CKQ55_RS29400 07931f2eb4c37a580f5093787cd47a11 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 1.7E-7 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CKQ55_RS21685 2995b2b5ba2347c4b2d813775456c5db 83 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 6.7E-6 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CKQ55_RS20575 6307423d0fa953c79768a195623cb506 299 SUPERFAMILY SSF54909 1 296 3.4E-88 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CKQ55_RS20575 6307423d0fa953c79768a195623cb506 299 Pfam PF04261 Dyp-type peroxidase family 5 295 4.2E-95 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CKQ55_RS20575 6307423d0fa953c79768a195623cb506 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 3.2E-88 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CKQ55_RS11090 a0c7d79d66bcefaf9f58f767697ee25f 117 SUPERFAMILY SSF142906 1 116 1.83E-32 T 29-03-2018 CKQ55_RS11090 a0c7d79d66bcefaf9f58f767697ee25f 117 Pfam PF04237 YjbR 12 102 4.0E-17 T 29-03-2018 IPR007351 Uncharacterised protein YjbR CKQ55_RS13350 f219b8e80501b78d357e9e1cccc817f6 293 Pfam PF00892 EamA-like transporter family 151 283 3.0E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS13350 f219b8e80501b78d357e9e1cccc817f6 293 Pfam PF00892 EamA-like transporter family 2 138 7.7E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CKQ55_RS13350 f219b8e80501b78d357e9e1cccc817f6 293 SUPERFAMILY SSF103481 184 289 2.88E-12 T 29-03-2018 CKQ55_RS13350 f219b8e80501b78d357e9e1cccc817f6 293 SUPERFAMILY SSF103481 36 141 7.06E-9 T 29-03-2018 CKQ55_RS02990 2271238a26ef58b7454e1c87df1414fc 306 Gene3D G3DSA:1.10.3720.10 2 293 1.7E-44 T 29-03-2018 CKQ55_RS02990 2271238a26ef58b7454e1c87df1414fc 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 4.1E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02990 2271238a26ef58b7454e1c87df1414fc 306 SUPERFAMILY SSF161098 90 288 3.79E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS28590 2adaad33c77e7f75a44c2e51c3fc459d 61 Pfam PF13617 YnbE-like lipoprotein 5 59 4.0E-28 T 29-03-2018 IPR025985 YnbE-like lipoprotein CKQ55_RS28590 2adaad33c77e7f75a44c2e51c3fc459d 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 16 61 2.0E-17 T 29-03-2018 CKQ55_RS30865 505566863b82731e19f85ff13e76aa3e 130 Pfam PF10784 Plasmid stability protein 8 78 2.3E-26 T 29-03-2018 IPR019720 Plasmid stability protein, StbB CKQ55_RS28465 b0b22a8839f3107cf031550e10bc026e 391 Gene3D G3DSA:2.40.50.100 66 138 5.6E-21 T 29-03-2018 CKQ55_RS28465 b0b22a8839f3107cf031550e10bc026e 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 2.3E-84 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CKQ55_RS28465 b0b22a8839f3107cf031550e10bc026e 391 Gene3D G3DSA:2.40.50.100 166 362 2.3E-5 T 29-03-2018 CKQ55_RS28465 b0b22a8839f3107cf031550e10bc026e 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 297 4.3E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CKQ55_RS28465 b0b22a8839f3107cf031550e10bc026e 391 SUPERFAMILY SSF111369 57 302 1.31E-73 T 29-03-2018 CKQ55_RS14730 93a9f89801b7df21ae244bc79f59c3f1 208 Pfam PF07947 YhhN family 27 205 2.5E-39 T 29-03-2018 IPR012506 YhhN-like GO:0016021 CKQ55_RS18725 55f0d6b8cf6539a385a73d07011e58f9 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.768 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CKQ55_RS18725 55f0d6b8cf6539a385a73d07011e58f9 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 2.6E-71 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CKQ55_RS18725 55f0d6b8cf6539a385a73d07011e58f9 159 Pfam PF02542 YgbB family 1 154 3.2E-66 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CKQ55_RS18725 55f0d6b8cf6539a385a73d07011e58f9 159 SUPERFAMILY SSF69765 1 156 3.79E-66 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CKQ55_RS18725 55f0d6b8cf6539a385a73d07011e58f9 159 Gene3D G3DSA:3.30.1330.50 1 158 4.1E-73 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CKQ55_RS18725 55f0d6b8cf6539a385a73d07011e58f9 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CKQ55_RS08955 a054c6ccb8cdec337e6402648cca6a94 259 Pfam PF03609 PTS system sorbose-specific iic component 1 233 5.1E-70 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CKQ55_RS27585 8adf6b7cef7dd32814447f619528a012 289 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 42 272 7.2E-54 T 29-03-2018 IPR018713 Domain of unknown function DUF2236 CKQ55_RS15675 5ebdbca17eb77837df2394521f3894b5 1265 Pfam PF13502 AsmA-like C-terminal region 1009 1251 3.0E-61 T 29-03-2018 IPR032712 AsmA-like, C-terminal CKQ55_RS15675 5ebdbca17eb77837df2394521f3894b5 1265 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1260 0.0 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 CKQ55_RS15675 5ebdbca17eb77837df2394521f3894b5 1265 Pfam PF13116 Protein of unknown function 506 786 2.9E-95 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 CKQ55_RS29565 94179ce952aac0615e2473e56cb8f42b 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 1.9E-45 T 29-03-2018 IPR020251 Uncharacterised protein family, YmjA CKQ55_RS29565 94179ce952aac0615e2473e56cb8f42b 81 ProDom PD059807 YMJA ECS1872 1 81 4.0E-32 T 29-03-2018 IPR020251 Uncharacterised protein family, YmjA CKQ55_RS17155 0f597f0d44aa2d3301704f21bf6ef090 187 Gene3D G3DSA:3.40.1740.10 103 179 9.9E-13 T 29-03-2018 CKQ55_RS17155 0f597f0d44aa2d3301704f21bf6ef090 187 Gene3D G3DSA:3.40.1740.10 1 95 2.1E-28 T 29-03-2018 CKQ55_RS17155 0f597f0d44aa2d3301704f21bf6ef090 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 3.6E-49 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CKQ55_RS17155 0f597f0d44aa2d3301704f21bf6ef090 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.732 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CKQ55_RS17155 0f597f0d44aa2d3301704f21bf6ef090 187 SUPERFAMILY SSF143456 1 187 5.36E-66 T 29-03-2018 CKQ55_RS23210 98ff9650c1d7a9987df209e3d0efc626 551 Pfam PF03321 GH3 auxin-responsive promoter 35 536 5.9E-80 T 29-03-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 CKQ55_RS09030 ea3b69832d2c56e71ab1e08e5bac61bd 290 Pfam PF05035 2-keto-3-deoxy-galactonokinase 8 285 4.4E-92 T 29-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 Gene3D G3DSA:1.10.10.10 3 81 2.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 Gene3D G3DSA:3.40.190.10 180 265 2.2E-26 T 29-03-2018 CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 SUPERFAMILY SSF46785 7 113 6.68E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 Pfam PF03466 LysR substrate binding domain 92 297 9.4E-44 T 29-03-2018 IPR005119 LysR, substrate-binding CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 SUPERFAMILY SSF53850 93 299 2.33E-44 T 29-03-2018 CKQ55_RS08495 36fd61ae7c9b792316e9c9039440dabb 314 Gene3D G3DSA:3.40.190.10 82 179 1.5E-14 T 29-03-2018 CKQ55_RS10070 589022d70e786ab585e68a49971b01a8 491 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 22 187 6.3E-40 T 29-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal CKQ55_RS10070 589022d70e786ab585e68a49971b01a8 491 Gene3D G3DSA:2.60.40.10 285 365 0.035 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS10070 589022d70e786ab585e68a49971b01a8 491 Gene3D G3DSA:2.60.40.10 182 284 0.57 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS10070 589022d70e786ab585e68a49971b01a8 491 SUPERFAMILY SSF81296 22 191 8.26E-64 T 29-03-2018 IPR014756 Immunoglobulin E-set CKQ55_RS10070 589022d70e786ab585e68a49971b01a8 491 Gene3D G3DSA:2.70.50.50 22 181 7.4E-60 T 29-03-2018 CKQ55_RS10070 589022d70e786ab585e68a49971b01a8 491 Gene3D G3DSA:2.10.10.20 411 491 1.5E-4 T 29-03-2018 CKQ55_RS26920 1369eae0c74665eb3129939d2f55217c 246 SUPERFAMILY SSF102215 1 237 1.31E-51 T 29-03-2018 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CKQ55_RS26920 1369eae0c74665eb3129939d2f55217c 246 Pfam PF02633 Creatinine amidohydrolase 5 232 1.2E-48 T 29-03-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CKQ55_RS26920 1369eae0c74665eb3129939d2f55217c 246 Gene3D G3DSA:3.40.50.10310 1 242 9.4E-56 T 29-03-2018 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 CKQ55_RS05510 506628eebae945320391eda359e8885c 71 Pfam PF13619 KTSC domain 7 63 1.4E-26 T 29-03-2018 IPR025309 KTSC domain CKQ55_RS29935 219b9684561bdd70c7f4efa6dbbef97d 166 Gene3D G3DSA:3.90.960.10 6 166 6.7E-34 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS29935 219b9684561bdd70c7f4efa6dbbef97d 166 SUPERFAMILY SSF55826 9 160 5.89E-33 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS29935 219b9684561bdd70c7f4efa6dbbef97d 166 Pfam PF04073 Aminoacyl-tRNA editing domain 29 153 2.5E-23 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CKQ55_RS25520 64e490755139137cff4b5a80e8d01de5 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 4.4E-166 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS25520 64e490755139137cff4b5a80e8d01de5 467 PIRSF PIRSF006446 2 459 1.7E-217 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS20125 b6a946e2ae406916ac2a0d76c3bf27cd 128 SUPERFAMILY SSF82649 1 125 2.22E-49 T 29-03-2018 CKQ55_RS20125 b6a946e2ae406916ac2a0d76c3bf27cd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 2.0E-71 T 29-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CKQ55_RS20125 b6a946e2ae406916ac2a0d76c3bf27cd 128 Pfam PF01592 NifU-like N terminal domain 2 126 2.2E-57 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CKQ55_RS20125 b6a946e2ae406916ac2a0d76c3bf27cd 128 Gene3D G3DSA:3.90.1010.10 1 128 4.0E-53 T 29-03-2018 CKQ55_RS08775 a2fd1b1fb4f5772b49dfe725978a0e21 240 Pfam PF01048 Phosphorylase superfamily 15 218 1.6E-39 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS08775 a2fd1b1fb4f5772b49dfe725978a0e21 240 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CKQ55_RS08775 a2fd1b1fb4f5772b49dfe725978a0e21 240 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 235 2.8E-124 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CKQ55_RS08775 a2fd1b1fb4f5772b49dfe725978a0e21 240 SUPERFAMILY SSF53167 3 235 4.32E-92 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CKQ55_RS08775 a2fd1b1fb4f5772b49dfe725978a0e21 240 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 236 52.078 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CKQ55_RS08775 a2fd1b1fb4f5772b49dfe725978a0e21 240 Gene3D G3DSA:3.40.50.1580 9 236 1.1E-55 T 29-03-2018 CKQ55_RS13475 79898d2b258f1543fbd75f9d7f056873 327 Pfam PF13310 Virulence protein RhuM family 55 305 7.1E-112 T 29-03-2018 IPR011204 Virulence protein RhuM-like CKQ55_RS13475 79898d2b258f1543fbd75f9d7f056873 327 PIRSF PIRSF015268 1 327 1.5E-150 T 29-03-2018 IPR011204 Virulence protein RhuM-like CKQ55_RS02045 477aa8b88f57c54e8797d489fd92591c 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 49.003 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CKQ55_RS02045 477aa8b88f57c54e8797d489fd92591c 234 Pfam PF04288 MukE-like family 10 230 9.1E-127 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 Gene3D G3DSA:3.50.50.60 1 370 1.3E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 Pfam PF01494 FAD binding domain 2 337 2.1E-20 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 5.1E-18 T 29-03-2018 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 5.1E-18 T 29-03-2018 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 5.1E-18 T 29-03-2018 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 5.1E-18 T 29-03-2018 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 SUPERFAMILY SSF51905 2 167 2.7E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS01370 9a93515a8ff9879359fa4aed934ddd15 384 SUPERFAMILY SSF51905 264 355 2.7E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CKQ55_RS15995 93cd8e36f0d079ecc21d4da550c8a38d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-37 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15995 93cd8e36f0d079ecc21d4da550c8a38d 103 SUPERFAMILY SSF141091 1 102 7.46E-37 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15995 93cd8e36f0d079ecc21d4da550c8a38d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.877 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS15995 93cd8e36f0d079ecc21d4da550c8a38d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CKQ55_RS15995 93cd8e36f0d079ecc21d4da550c8a38d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-44 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CKQ55_RS27465 1623c224e564b136b6749b83857f46e4 242 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 13 240 1.2E-91 T 29-03-2018 IPR017792 Urea carboxylase-associated protein 2 CKQ55_RS27465 1623c224e564b136b6749b83857f46e4 242 Pfam PF09347 Domain of unknown function (DUF1989) 15 186 8.1E-51 T 29-03-2018 IPR018959 Domain of unknown function DUF1989 CKQ55_RS19850 b0cee9721ae399cc23250a430f1513ed 151 Pfam PF14328 Domain of unknown function (DUF4385) 7 148 1.2E-65 T 29-03-2018 IPR025494 Protein of unknown function DUF4385 CKQ55_RS30585 71c72bf558d953731212627714fa7509 129 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 17 125 4.3E-40 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CKQ55_RS30585 71c72bf558d953731212627714fa7509 129 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 20 124 3.7E-38 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CKQ55_RS24840 a87a7dba5d134e8d08eb3b4c4662a876 62 Pfam PF10636 Hemin uptake protein hemP 27 62 1.3E-16 T 29-03-2018 IPR019600 Hemin uptake protein HemP CKQ55_RS24840 a87a7dba5d134e8d08eb3b4c4662a876 62 Gene3D G3DSA:2.10.70.10 26 62 3.6E-17 T 29-03-2018 CKQ55_RS21750 e36b38933d0aba3ffd0c0087eaf5f9f7 489 PIRSF PIRSF006060 1 487 5.1E-78 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS21750 e36b38933d0aba3ffd0c0087eaf5f9f7 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CKQ55_RS21750 e36b38933d0aba3ffd0c0087eaf5f9f7 489 Pfam PF00324 Amino acid permease 21 475 2.6E-145 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CKQ55_RS08335 e78726bdc99dbe38db91756e60e35537 179 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 11 174 5.2E-56 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CKQ55_RS08335 e78726bdc99dbe38db91756e60e35537 179 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 11 174 9.6E-60 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CKQ55_RS18185 fba9894b3d2499e0fbdf4b60e47307ad 116 Pfam PF00936 BMC domain 45 109 8.8E-13 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18185 fba9894b3d2499e0fbdf4b60e47307ad 116 PIRSF PIRSF012296 1 116 4.5E-59 T 29-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 CKQ55_RS18185 fba9894b3d2499e0fbdf4b60e47307ad 116 SMART SM00877 44 116 3.6E-19 T 29-03-2018 IPR000249 Microcompartment protein, bacteria CKQ55_RS18185 fba9894b3d2499e0fbdf4b60e47307ad 116 SUPERFAMILY SSF143414 44 112 7.72E-15 T 29-03-2018 CKQ55_RS00065 51b847211f50bf8c3d581000572458e5 276 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 8 274 2.8E-78 T 29-03-2018 IPR019276 Protein of unkown function DUF2303 CKQ55_RS00435 51b847211f50bf8c3d581000572458e5 276 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 8 274 2.8E-78 T 29-03-2018 IPR019276 Protein of unkown function DUF2303 CKQ55_RS21265 4b332ddfb1767b600d622d5670171649 143 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 137 3.7E-17 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 CKQ55_RS11270 4b16c7c71abc504dd5c50acc95afd75a 262 Pfam PF10127 Predicted nucleotidyltransferase 10 256 1.4E-92 T 29-03-2018 IPR018775 Nucleotidyltransferase, predicted CKQ55_RS11270 4b16c7c71abc504dd5c50acc95afd75a 262 Gene3D G3DSA:3.30.460.10 5 127 9.3E-6 T 29-03-2018 CKQ55_RS15460 fcf3f625be2612f1b23238892b8f635b 86 Pfam PF03889 Domain of unknown function 9 45 2.8E-24 T 29-03-2018 IPR005589 Protein of unknown function DUF331 CKQ55_RS26970 e93552b33285d836e8a46a1e62ea6f11 76 Gene3D G3DSA:3.30.429.10 2 69 2.6E-18 T 29-03-2018 CKQ55_RS26970 e93552b33285d836e8a46a1e62ea6f11 76 Pfam PF01361 Tautomerase enzyme 2 61 7.7E-12 T 29-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CKQ55_RS26970 e93552b33285d836e8a46a1e62ea6f11 76 SUPERFAMILY SSF55331 2 63 4.73E-13 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CKQ55_RS05540 d5e8daf6fa6e6caf7704f0d753e6a4f1 193 Pfam PF05766 Bacteriophage Lambda NinG protein 3 186 3.4E-70 T 29-03-2018 IPR008713 Bacteriophage lambda NinG CKQ55_RS02360 759f323ef383d8edf458d245c215a15a 238 Gene3D G3DSA:1.10.3720.10 2 236 1.1E-37 T 29-03-2018 CKQ55_RS02360 759f323ef383d8edf458d245c215a15a 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 4.4E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS02360 759f323ef383d8edf458d245c215a15a 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 87 1.1E-12 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS02360 759f323ef383d8edf458d245c215a15a 238 SUPERFAMILY SSF161098 8 216 3.53E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS15450 23c940b5f78035fc77bc83544130934b 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 3.8E-24 T 29-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 1.9E-115 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 1.4E-82 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 SUPERFAMILY SSF111364 32 294 6.02E-89 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CKQ55_RS06395 cdbe741a2aae7754944cd57809a01e0f 294 Gene3D G3DSA:2.40.230.20 26 294 5.2E-79 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CKQ55_RS06390 a2d7aa51d67943d548d8e322e01e31fb 180 Pfam PF11622 Protein of unknown function (DUF3251) 20 177 8.5E-77 T 29-03-2018 IPR021658 Domain of unknown function DUF3251 CKQ55_RS06390 a2d7aa51d67943d548d8e322e01e31fb 180 Gene3D G3DSA:2.60.40.1620 43 175 1.1E-54 T 29-03-2018 IPR021658 Domain of unknown function DUF3251 CKQ55_RS18785 aa22e7627d11e55a146aeb0a8222fdc0 78 Gene3D G3DSA:2.20.25.10 2 41 0.002 T 29-03-2018 CKQ55_RS20370 6607b7d89ca197c7d27a0d2f471779cc 355 Pfam PF01594 AI-2E family transporter 20 345 3.2E-84 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CKQ55_RS17195 e9f593ba07d8e817ea9e9c8ffbfae1d2 53 Pfam PF11036 Virulence promoting factor 6 47 4.6E-20 T 29-03-2018 IPR020196 Uncharacterised protein family YqgB CKQ55_RS17195 e9f593ba07d8e817ea9e9c8ffbfae1d2 53 ProDom PD050163 YQGB INNER MEMBRANE STY3241 6 47 3.0E-9 T 29-03-2018 IPR020196 Uncharacterised protein family YqgB CKQ55_RS13545 283c2e7ec700039f97ed6ce1e962863d 227 Pfam PF07385 D-lyxose isomerase 1 222 7.6E-88 T 29-03-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 CKQ55_RS13545 283c2e7ec700039f97ed6ce1e962863d 227 Gene3D G3DSA:2.60.120.10 73 200 9.1E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CKQ55_RS28265 c1ddc2f5a17bee9a201fe6d09f18e4c1 219 Gene3D G3DSA:3.40.50.150 1 219 4.0E-40 T 29-03-2018 CKQ55_RS28265 c1ddc2f5a17bee9a201fe6d09f18e4c1 219 Pfam PF01596 O-methyltransferase 28 202 5.5E-40 T 29-03-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CKQ55_RS28265 c1ddc2f5a17bee9a201fe6d09f18e4c1 219 SUPERFAMILY SSF53335 3 215 2.01E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CKQ55_RS17785 3998713516402d7671afa1e657ac42c2 90 Pfam PF17090 Uncharacterised protein family 25 88 1.1E-18 T 29-03-2018 IPR031381 Uncharacterised protein YtcA CKQ55_RS10500 de08b9e6215072603630b877b99a2966 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 5.6E-22 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 CKQ55_RS06385 3b5674c14bab8d87adbb64069345727d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.083 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CKQ55_RS06385 3b5674c14bab8d87adbb64069345727d 149 Pfam PF03477 ATP cone domain 50 136 4.6E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CKQ55_RS06385 3b5674c14bab8d87adbb64069345727d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.6E-77 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CKQ55_RS31315 24a9f8d2d95697e44e31f9aa1513a898 291 Pfam PF01609 Transposase DDE domain 138 288 2.2E-27 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CKQ55_RS31315 24a9f8d2d95697e44e31f9aa1513a898 291 Pfam PF05598 Transposase domain (DUF772) 51 124 2.9E-21 T 29-03-2018 IPR008490 Transposase InsH, N-terminal CKQ55_RS10210 8cba9f4ffb8707a2e6435d39b583c96c 450 Gene3D G3DSA:3.30.2290.10 10 236 2.9E-61 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CKQ55_RS10210 8cba9f4ffb8707a2e6435d39b583c96c 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 1.5E-61 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CKQ55_RS10210 8cba9f4ffb8707a2e6435d39b583c96c 450 SUPERFAMILY SSF111283 17 449 1.57E-130 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CKQ55_RS17095 9c1d51a4b09f3807c5af57219cf7403f 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 236 4.7E-41 T 29-03-2018 IPR021307 Protein of unknown function DUF2884 CKQ55_RS14815 0bab1f31adf721e680157e11079cad97 426 Gene3D G3DSA:1.10.3470.10 107 401 2.5E-47 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS14815 0bab1f31adf721e680157e11079cad97 426 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 4.3E-25 T 29-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CKQ55_RS14815 0bab1f31adf721e680157e11079cad97 426 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 1.8E-59 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS21595 36a8ca8799328988db8038c11f86811c 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 2.2E-97 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CKQ55_RS21595 36a8ca8799328988db8038c11f86811c 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 46.459 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CKQ55_RS11295 e3489c421db1f26d6286144a9018b3d0 90 Pfam PF11656 YjbD family (DUF3811) 3 90 8.1E-39 T 29-03-2018 IPR020317 Uncharacterised protein family YjbD CKQ55_RS11295 e3489c421db1f26d6286144a9018b3d0 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 7.0E-33 T 29-03-2018 IPR020317 Uncharacterised protein family YjbD CKQ55_RS25510 6dae859364eeed22d5562eb062f9d052 541 Gene3D G3DSA:2.60.40.1180 457 535 1.3E-8 T 29-03-2018 CKQ55_RS25510 6dae859364eeed22d5562eb062f9d052 541 SMART SM00642 12 419 4.6E-60 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS25510 6dae859364eeed22d5562eb062f9d052 541 Pfam PF00128 Alpha amylase, catalytic domain 27 376 1.8E-59 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CKQ55_RS25510 6dae859364eeed22d5562eb062f9d052 541 Gene3D G3DSA:3.20.20.80 9 454 9.2E-85 T 29-03-2018 CKQ55_RS25510 6dae859364eeed22d5562eb062f9d052 541 SUPERFAMILY SSF51445 3 317 5.68E-89 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS25510 6dae859364eeed22d5562eb062f9d052 541 SUPERFAMILY SSF51445 345 452 5.68E-89 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CKQ55_RS11455 f139b9a68ec7d285fa08981c807a56d6 144 Pfam PF13801 Heavy-metal resistance 8 120 8.1E-23 T 29-03-2018 IPR025961 Heavy-metal resistance protein CKQ55_RS11455 f139b9a68ec7d285fa08981c807a56d6 144 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 23 123 9.0E-31 T 29-03-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 CKQ55_RS09375 b1e0cc88b5fecab02b6a7904b24727e5 137 SUPERFAMILY SSF103481 28 113 2.88E-16 T 29-03-2018 CKQ55_RS09375 b1e0cc88b5fecab02b6a7904b24727e5 137 Pfam PF00893 Small Multidrug Resistance protein 8 101 3.1E-18 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CKQ55_RS27475 544fd8b1a596e02e8b4d875a0a7e0fd3 271 SUPERFAMILY SSF161098 70 255 5.76E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27475 544fd8b1a596e02e8b4d875a0a7e0fd3 271 Gene3D G3DSA:1.10.3720.10 13 265 6.8E-22 T 29-03-2018 CKQ55_RS27475 544fd8b1a596e02e8b4d875a0a7e0fd3 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 261 1.1E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS15795 3f6f52e3ec5e77ef6510d6f06d8efbf2 377 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 376 53.513 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CKQ55_RS15795 3f6f52e3ec5e77ef6510d6f06d8efbf2 377 SUPERFAMILY SSF52540 72 210 2.28E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS15795 3f6f52e3ec5e77ef6510d6f06d8efbf2 377 Gene3D G3DSA:3.40.50.300 21 374 4.6E-13 T 29-03-2018 CKQ55_RS15795 3f6f52e3ec5e77ef6510d6f06d8efbf2 377 Pfam PF03969 AFG1-like ATPase 5 373 1.5E-162 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CKQ55_RS21460 9171fa93cf859d1432557d64f644b0f3 368 Pfam PF01594 AI-2E family transporter 11 339 1.8E-53 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 48.289 T 29-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 SUPERFAMILY SSF103025 8 242 5.02E-66 T 29-03-2018 CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 1.3E-25 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 Gene3D G3DSA:3.30.70.1400 27 240 8.6E-25 T 29-03-2018 CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 138 4.2E-9 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 PIRSF PIRSF006487 20 286 2.8E-11 T 29-03-2018 CKQ55_RS17435 a8d08b3748a66b4565040abcd5b5baf2 327 SUPERFAMILY SSF101790 244 325 9.15E-26 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CKQ55_RS17025 4610c39bfad20090efbf2dd3c5a9750d 67 Gene3D G3DSA:1.10.260.40 1 60 7.5E-8 T 29-03-2018 CKQ55_RS17025 4610c39bfad20090efbf2dd3c5a9750d 67 SUPERFAMILY SSF47413 3 57 1.41E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CKQ55_RS17025 4610c39bfad20090efbf2dd3c5a9750d 67 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 58 2.5E-21 T 29-03-2018 CKQ55_RS25940 23c2863e8192ee34225f8e94c916c7e6 508 TIGRFAM TIGR00819 ydaH: AbgT transporter family 1 507 2.5E-254 T 29-03-2018 IPR011540 AbgT, Proteobacteria GO:0015558|GO:1902604 CKQ55_RS25940 23c2863e8192ee34225f8e94c916c7e6 508 Pfam PF03806 AbgT putative transporter family 14 505 5.6E-199 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CKQ55_RS28095 88bf87769f69adc57b703690865b1270 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 211 1.1E-54 T 29-03-2018 IPR021747 Protein of unknown function DUF3313 CKQ55_RS02765 3b5bba31764955c0416b7d03f8a23a0e 283 SUPERFAMILY SSF56563 21 273 5.1E-5 T 29-03-2018 CKQ55_RS12170 31a3715d966c8ec88810217202f7ee61 119 Pfam PF07226 Protein of unknown function (DUF1422) 4 114 4.9E-53 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 CKQ55_RS12170 31a3715d966c8ec88810217202f7ee61 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 7.0E-58 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 CKQ55_RS15790 25da570c3d5bc6daa3389432844f7472 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 4.5E-47 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 CKQ55_RS15790 25da570c3d5bc6daa3389432844f7472 132 PIRSF PIRSF006318 1 132 4.0E-51 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 CKQ55_RS26715 0dd12329291c6d724ec44458a40652e5 251 Pfam PF13468 Glyoxalase-like domain 6 196 6.2E-37 T 29-03-2018 IPR025870 Glyoxalase-like domain CKQ55_RS26715 0dd12329291c6d724ec44458a40652e5 251 Gene3D G3DSA:3.10.180.10 1 147 1.8E-9 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS26715 0dd12329291c6d724ec44458a40652e5 251 Gene3D G3DSA:3.10.180.10 148 246 0.2 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS26715 0dd12329291c6d724ec44458a40652e5 251 SUPERFAMILY SSF54593 3 210 8.12E-8 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS11795 aa1ff32ee8f4f6440811ef9b3fc449fb 330 SUPERFAMILY SSF53474 26 167 1.19E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS11795 aa1ff32ee8f4f6440811ef9b3fc449fb 330 SUPERFAMILY SSF53474 250 328 1.19E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS11795 aa1ff32ee8f4f6440811ef9b3fc449fb 330 Pfam PF12146 Serine aminopeptidase, S33 52 312 1.2E-57 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CKQ55_RS11795 aa1ff32ee8f4f6440811ef9b3fc449fb 330 Gene3D G3DSA:3.40.50.1820 17 330 1.6E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS08295 ef131552027e539806e5e84847fe62b6 255 Pfam PF09335 SNARE associated Golgi protein 36 159 2.4E-17 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS26685 19215fbfb4882438c0437b9d8552d31a 69 SUPERFAMILY SSF159871 3 67 1.96E-11 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS26685 19215fbfb4882438c0437b9d8552d31a 69 Gene3D G3DSA:3.30.1660.10 4 69 7.0E-14 T 29-03-2018 IPR025543 Dodecin-like CKQ55_RS26685 19215fbfb4882438c0437b9d8552d31a 69 Pfam PF07338 Protein of unknown function (DUF1471) 24 67 2.2E-8 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CKQ55_RS22335 1bcda8285438704d2311caa13e8791af 318 Gene3D G3DSA:3.40.50.1010 2 212 2.5E-7 T 29-03-2018 IPR029060 PIN domain-like CKQ55_RS09120 e8c1c5dbdfc1875db67ac94872fadcfb 67 Pfam PF04328 Selenoprotein, putative 5 67 1.2E-27 T 29-03-2018 IPR007423 Selenoprotein, putative CKQ55_RS22635 a8b9a98be905e7d209745e966612286b 232 Pfam PF14897 EpsG family 38 222 9.9E-11 T 29-03-2018 CKQ55_RS22620 d7bf8df3a0b964e68d38cf9f8324de69 277 SUPERFAMILY SSF53448 3 247 5.63E-27 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS22620 d7bf8df3a0b964e68d38cf9f8324de69 277 Pfam PF00535 Glycosyl transferase family 2 5 128 3.8E-8 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CKQ55_RS22620 d7bf8df3a0b964e68d38cf9f8324de69 277 Gene3D G3DSA:3.90.550.10 2 223 1.0E-19 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CKQ55_RS09530 0a8083569386ba8e3714d5ed365ccff9 144 Gene3D G3DSA:3.10.180.10 4 139 2.1E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS09530 0a8083569386ba8e3714d5ed365ccff9 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 124 1.0E-16 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS09530 0a8083569386ba8e3714d5ed365ccff9 144 SUPERFAMILY SSF54593 12 130 3.09E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS03085 ae05ccaf4605502922f72da7221398ec 368 Pfam PF03600 Citrate transporter 19 304 2.3E-26 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CKQ55_RS23845 3345f77b048aef5c3c3b607888f6dff6 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 1.0E-42 T 29-03-2018 IPR009950 Protein of unknown function DUF1480 CKQ55_RS23845 3345f77b048aef5c3c3b607888f6dff6 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 2.0E-35 T 29-03-2018 IPR009950 Protein of unknown function DUF1480 CKQ55_RS00880 d8b108a30294d08d69c539331c21f469 81 Gene3D G3DSA:3.30.910.10 1 78 3.5E-31 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS00880 d8b108a30294d08d69c539331c21f469 81 Pfam PF06183 DinI-like family 14 78 1.3E-28 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS00880 d8b108a30294d08d69c539331c21f469 81 SUPERFAMILY SSF54857 1 79 3.4E-26 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CKQ55_RS08625 3601e002bf33ec53801cdc5489858a9f 249 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 9.2E-17 T 29-03-2018 IPR025217 Domain of unknown function DUF3944 CKQ55_RS08625 3601e002bf33ec53801cdc5489858a9f 249 Pfam PF03981 Ubiquinol-cytochrome C chaperone 59 220 2.6E-16 T 29-03-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CKQ55_RS22325 7bca3ae0a86d278b96a9f9de5c53a8a7 149 Pfam PF05069 Phage virion morphogenesis family 3 147 1.0E-40 T 29-03-2018 IPR006522 Phage virion morphogensis protein CKQ55_RS22325 7bca3ae0a86d278b96a9f9de5c53a8a7 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 5 147 2.3E-42 T 29-03-2018 IPR006522 Phage virion morphogensis protein CKQ55_RS25180 f6416fbd1517677bbb31b6e557e9135c 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 444 2.0E-133 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CKQ55_RS25180 f6416fbd1517677bbb31b6e557e9135c 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 443 1.9E-140 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CKQ55_RS20510 487f9cd7da5ff0d8a248415fd78b8098 410 PIRSF PIRSF019466 1 408 5.6E-128 T 29-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CKQ55_RS20510 487f9cd7da5ff0d8a248415fd78b8098 410 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 5.8E-140 T 29-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CKQ55_RS09695 fe73fb879581966707dd9915f548af5a 61 SUPERFAMILY SSF48179 2 60 7.82E-7 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CKQ55_RS09695 fe73fb879581966707dd9915f548af5a 61 Gene3D G3DSA:1.10.1040.10 1 21 0.043 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS09695 fe73fb879581966707dd9915f548af5a 61 Gene3D G3DSA:1.10.1040.10 22 61 9.0E-7 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CKQ55_RS03585 aef2b33a6f82eae577e0392ac7bafaaa 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.4E-38 T 29-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CKQ55_RS03585 aef2b33a6f82eae577e0392ac7bafaaa 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.8E-22 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CKQ55_RS14920 5ed36177e0c5efcabb4a895d859f039e 446 PIRSF PIRSF002746 1 446 5.2E-156 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS14920 5ed36177e0c5efcabb4a895d859f039e 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 3.3E-177 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS14920 5ed36177e0c5efcabb4a895d859f039e 446 Pfam PF02447 GntP family permease 5 441 4.1E-167 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CKQ55_RS18820 e240143ec0211648f1ed162bf9929a3a 209 SUPERFAMILY SSF49401 43 208 1.79E-26 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS18820 e240143ec0211648f1ed162bf9929a3a 209 Gene3D G3DSA:2.60.40.1090 42 209 2.1E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS23220 ed6e7f5d026f4659728baba4ebb1181a 391 SUPERFAMILY SSF52777 13 149 4.6E-9 T 29-03-2018 CKQ55_RS23220 ed6e7f5d026f4659728baba4ebb1181a 391 Gene3D G3DSA:3.30.559.10 6 178 2.5E-8 T 29-03-2018 CKQ55_RS12100 a4c4ff7d036b31794f438746bc460e3d 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.5E-17 T 29-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 CKQ55_RS23080 2efa0c5d34e944215c6330d3f362127a 161 Pfam PF15941 FidL-like putative membrane protein 77 158 7.6E-8 T 29-03-2018 IPR031854 Putative membrane protein FidL-like CKQ55_RS13035 7cea835233ecfec593c96afbb12102fb 135 Pfam PF00583 Acetyltransferase (GNAT) family 39 120 1.5E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS13035 7cea835233ecfec593c96afbb12102fb 135 Gene3D G3DSA:3.40.630.30 6 133 2.0E-15 T 29-03-2018 CKQ55_RS13035 7cea835233ecfec593c96afbb12102fb 135 SUPERFAMILY SSF55729 13 125 8.72E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS13315 d78c7009f826879ba40ca2b7b523bd56 100 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 6.2E-33 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS13315 d78c7009f826879ba40ca2b7b523bd56 100 Gene3D G3DSA:1.20.58.80 2 100 1.0E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS13315 d78c7009f826879ba40ca2b7b523bd56 100 SUPERFAMILY SSF46973 2 100 1.16E-32 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS13315 d78c7009f826879ba40ca2b7b523bd56 100 PIRSF PIRSF000699 1 100 1.4E-32 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CKQ55_RS28560 f5d991c1039281ea4662b2e4826d098b 290 Gene3D G3DSA:2.60.120.620 2 245 4.7E-40 T 29-03-2018 CKQ55_RS28560 f5d991c1039281ea4662b2e4826d098b 290 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 10 224 1.5E-27 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CKQ55_RS28560 f5d991c1039281ea4662b2e4826d098b 290 SUPERFAMILY SSF51197 2 249 8.51E-57 T 29-03-2018 CKQ55_RS26175 065e51d1a6ebb1eb72131ed67993ea1c 285 Gene3D G3DSA:1.20.1630.10 2 280 6.6E-42 T 29-03-2018 CKQ55_RS26175 065e51d1a6ebb1eb72131ed67993ea1c 285 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 275 5.2E-91 T 29-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CKQ55_RS00195 c16c21babac371e09c5efe5402c3deae 126 Gene3D G3DSA:3.90.1720.10 2 122 6.2E-6 T 29-03-2018 CKQ55_RS09090 dc7043c90311e23ac4f1c7f1392b2b8c 263 Hamap MF_01292 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase [hpcH]. 1 263 68.139 T 29-03-2018 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 CKQ55_RS09090 dc7043c90311e23ac4f1c7f1392b2b8c 263 SUPERFAMILY SSF51621 2 250 4.08E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CKQ55_RS09090 dc7043c90311e23ac4f1c7f1392b2b8c 263 Gene3D G3DSA:3.20.20.60 1 263 9.4E-54 T 29-03-2018 CKQ55_RS09090 dc7043c90311e23ac4f1c7f1392b2b8c 263 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 240 2.4E-65 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CKQ55_RS09090 dc7043c90311e23ac4f1c7f1392b2b8c 263 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 3 250 4.5E-130 T 29-03-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 CKQ55_RS30755 f77c864939cc81010c948d6fd22040a3 82 Pfam PF06006 Bacterial protein of unknown function (DUF905) 11 80 2.3E-41 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CKQ55_RS30755 f77c864939cc81010c948d6fd22040a3 82 Gene3D G3DSA:3.30.160.130 10 80 2.1E-38 T 29-03-2018 CKQ55_RS30755 f77c864939cc81010c948d6fd22040a3 82 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 6 82 2.0E-20 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CKQ55_RS30755 f77c864939cc81010c948d6fd22040a3 82 SUPERFAMILY SSF54786 15 80 5.49E-28 T 29-03-2018 CKQ55_RS16770 1da5aefe9ee8536460d0409a032fd5df 190 Pfam PF00419 Fimbrial protein 33 189 1.8E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS16770 1da5aefe9ee8536460d0409a032fd5df 190 SUPERFAMILY SSF49401 32 189 2.04E-31 T 29-03-2018 IPR008966 Adhesion domain CKQ55_RS16770 1da5aefe9ee8536460d0409a032fd5df 190 Gene3D G3DSA:2.60.40.1090 30 190 1.1E-29 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CKQ55_RS25370 cd48b4efb9fed4b91a9c0857c953f95e 223 Pfam PF15977 Winged helix-turn-helix DNA binding 151 216 3.0E-20 T 29-03-2018 CKQ55_RS23190 9ebb770901edda161c03c0fb2dfaabe7 290 Gene3D G3DSA:3.90.850.10 69 288 3.2E-7 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CKQ55_RS04940 5402efd32618cb50aeb565c85446809f 225 Gene3D G3DSA:2.60.40.10 22 147 2.2E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CKQ55_RS14230 b0e33dc5dc3e55f998d424a34515fcc1 41 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 7 41 2.0E-15 T 29-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr CKQ55_RS06605 ec41348d951a4851072e152b35e7fd12 227 Pfam PF06904 Extensin-like protein C-terminus 54 226 7.5E-55 T 29-03-2018 IPR009683 Extensin-like, C-terminal CKQ55_RS18880 52b503f0e6a423ec1bde1a1a9c5b676f 264 Pfam PF01575 MaoC like domain 6 45 2.4E-6 T 29-03-2018 IPR002539 MaoC-like domain CKQ55_RS18880 52b503f0e6a423ec1bde1a1a9c5b676f 264 SUPERFAMILY SSF54637 5 112 6.3E-11 T 29-03-2018 IPR029069 HotDog domain CKQ55_RS18880 52b503f0e6a423ec1bde1a1a9c5b676f 264 Gene3D G3DSA:3.10.129.10 2 85 5.8E-12 T 29-03-2018 CKQ55_RS17400 19748f0f4a6e8d122dce73420f188d8a 247 Gene3D G3DSA:3.20.20.70 3 247 4.3E-104 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CKQ55_RS17400 19748f0f4a6e8d122dce73420f188d8a 247 Pfam PF07071 KDGP aldolase 7 226 3.2E-92 T 29-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS17400 19748f0f4a6e8d122dce73420f188d8a 247 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 7 244 1.4E-103 T 29-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CKQ55_RS29875 8b41aa1929532d4a03af8c0d981e3c7e 91 Pfam PF07023 Protein of unknown function (DUF1315) 5 79 2.3E-25 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 CKQ55_RS28945 aef194c1b1a89f59a4c1fd6823b09e84 92 Pfam PF05488 PAAR motif 9 78 1.5E-12 T 29-03-2018 IPR008727 PAAR motif CKQ55_RS13665 a344ee3dcb907c994c784ecff6f2cf32 205 Pfam PF03458 UPF0126 domain 5 78 5.4E-19 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CKQ55_RS13665 a344ee3dcb907c994c784ecff6f2cf32 205 Pfam PF03458 UPF0126 domain 91 164 3.2E-21 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CKQ55_RS17800 16319510abcfbccba0632c214c00b773 203 Pfam PF01810 LysE type translocator 16 200 5.5E-23 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS22280 08e3b808283a5f95a906e3012b568ee6 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 7.3E-106 T 29-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 CKQ55_RS22280 08e3b808283a5f95a906e3012b568ee6 284 Gene3D G3DSA:1.20.120.20 144 271 1.2E-5 T 29-03-2018 CKQ55_RS07900 f97e9e3e5234cdaab9672e49107c6437 146 Gene3D G3DSA:3.40.50.510 1 136 2.3E-20 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS07900 f97e9e3e5234cdaab9672e49107c6437 146 Pfam PF03610 PTS system fructose IIA component 3 116 1.6E-23 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS07900 f97e9e3e5234cdaab9672e49107c6437 146 SUPERFAMILY SSF53062 1 124 3.53E-24 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CKQ55_RS07190 18cb5d30eb7da54fbfad6ba3f9e18b2b 322 Pfam PF13737 Transposase DDE domain 34 145 8.6E-45 T 29-03-2018 IPR025668 Transposase DDE domain CKQ55_RS10540 d83a2216a93e2e424d7e303bd4925c2a 153 SUPERFAMILY SSF52540 29 131 5.34E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS10540 d83a2216a93e2e424d7e303bd4925c2a 153 Gene3D G3DSA:3.40.50.300 1 153 1.3E-51 T 29-03-2018 CKQ55_RS10540 d83a2216a93e2e424d7e303bd4925c2a 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 1.3E-57 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CKQ55_RS10540 d83a2216a93e2e424d7e303bd4925c2a 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 6.8E-42 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CKQ55_RS10015 015f45a8f066cefa8721532539cbd160 147 Gene3D G3DSA:3.40.50.10110 1 147 2.2E-52 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CKQ55_RS10015 015f45a8f066cefa8721532539cbd160 147 SUPERFAMILY SSF102400 1 145 1.57E-48 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CKQ55_RS10015 015f45a8f066cefa8721532539cbd160 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 1.1E-38 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CKQ55_RS27575 2d4d6c17857127d2c58c5fd2a3e9305d 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 283 3.7E-61 T 29-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CKQ55_RS28360 28e7f7de2ae410b8b2d6312893a5538d 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 4.9E-6 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CKQ55_RS28360 28e7f7de2ae410b8b2d6312893a5538d 141 Gene3D G3DSA:3.10.180.10 1 138 1.5E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS28360 28e7f7de2ae410b8b2d6312893a5538d 141 SUPERFAMILY SSF54593 2 130 1.13E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CKQ55_RS22450 f27be311e72f2b373d2e4ab08a7e69ea 253 Pfam PF02274 Amidinotransferase 58 250 4.9E-9 T 29-03-2018 CKQ55_RS22450 f27be311e72f2b373d2e4ab08a7e69ea 253 SUPERFAMILY SSF55909 25 253 3.49E-47 T 29-03-2018 CKQ55_RS22450 f27be311e72f2b373d2e4ab08a7e69ea 253 Gene3D G3DSA:3.75.10.10 2 253 3.2E-43 T 29-03-2018 CKQ55_RS24385 27eb888a9e76b4108c94f6f6cb922c66 91 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 1.5E-47 T 29-03-2018 IPR019698 Protein of unknown function DUF2583 CKQ55_RS13520 aecf3f2bb7950569566217b398b6af71 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 7.1E-31 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CKQ55_RS13520 aecf3f2bb7950569566217b398b6af71 104 SUPERFAMILY SSF52794 2 100 8.2E-33 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS13520 aecf3f2bb7950569566217b398b6af71 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 88 5.1E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS13520 aecf3f2bb7950569566217b398b6af71 104 Gene3D G3DSA:3.40.50.2300 2 101 4.2E-36 T 29-03-2018 CKQ55_RS23805 fb1dd22765448490176e1a70447f1bb9 319 Pfam PF05229 Spore Coat Protein U domain 184 316 2.0E-21 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS23805 fb1dd22765448490176e1a70447f1bb9 319 Pfam PF05229 Spore Coat Protein U domain 17 158 2.6E-16 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS23805 fb1dd22765448490176e1a70447f1bb9 319 SMART SM00972 93 158 3.6E-14 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS23805 fb1dd22765448490176e1a70447f1bb9 319 SMART SM00972 262 316 5.1E-10 T 29-03-2018 IPR007893 Spore coat protein U CKQ55_RS07735 a8977bc5ad7be18b7fc5adadd013ed33 174 Pfam PF16537 Type II secretion system protein B 99 157 2.5E-20 T 29-03-2018 IPR032389 Type II secretion system protein B CKQ55_RS10705 5b7933c90d6983811b2b2a9fc0a856b0 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 2.1E-31 T 29-03-2018 IPR025294 Protein of unknown function DUF4156 CKQ55_RS06750 95ec4467196d7a9fcb65134ec9924657 349 Gene3D G3DSA:1.10.3470.10 26 329 2.1E-33 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS06750 95ec4467196d7a9fcb65134ec9924657 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 323 6.6E-36 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS22245 0929425549833e564302090d1a95d7fe 762 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 136 465 1.6E-110 T 29-03-2018 IPR008766 Replication gene A protein GO:0006260 CKQ55_RS25455 9c2700192bad4ae77221901a2845d150 209 Pfam PF01810 LysE type translocator 15 204 9.2E-35 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CKQ55_RS05395 c704b7641fc032b8227f6392b825b1ae 121 Pfam PF04233 Phage Mu protein F like protein 40 102 1.7E-6 T 29-03-2018 IPR006528 Phage head morphogenesis domain CKQ55_RS09525 e3f6a144f372cf809136f07fd7cf005e 107 Gene3D G3DSA:2.10.260.10 44 104 1.1E-4 T 29-03-2018 CKQ55_RS09525 e3f6a144f372cf809136f07fd7cf005e 107 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 21 71 6.8E-16 T 29-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CKQ55_RS20755 336400085f6d368a474f4af3c95534cc 116 Pfam PF10697 Protein of unknown function (DUF2502) 23 99 2.4E-18 T 29-03-2018 IPR019638 Protein of unknown function DUF2502 CKQ55_RS06785 0c022f51b7a783ad66a34145d0db09a5 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 217 6.9E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS06785 0c022f51b7a783ad66a34145d0db09a5 227 Gene3D G3DSA:1.10.3720.10 3 225 1.8E-33 T 29-03-2018 CKQ55_RS06785 0c022f51b7a783ad66a34145d0db09a5 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 115 2.0E-13 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CKQ55_RS06785 0c022f51b7a783ad66a34145d0db09a5 227 SUPERFAMILY SSF161098 23 214 3.53E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS27505 23d3f4f58eb99a5ee40d0c3853036267 144 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 140 9.5E-31 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ CKQ55_RS01250 3e5616f185e72a14c16be88cdd6be05d 47 Pfam PF11158 Protein of unknown function (DUF2938) 1 42 5.8E-13 T 29-03-2018 IPR021329 Protein of unknown function DUF2938 CKQ55_RS04315 e5ccf88fef463c5c8aadf0cdb08ae696 420 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 25 385 1.3E-14 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CKQ55_RS03600 6c0ecb0a3b55db3f656eadd583bc8492 94 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 2 94 5.2E-39 T 29-03-2018 IPR011846 Cyd operon protein YbgE CKQ55_RS03600 6c0ecb0a3b55db3f656eadd583bc8492 94 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 91 1.5E-32 T 29-03-2018 IPR011846 Cyd operon protein YbgE CKQ55_RS10700 caace9eb7a19a2cdda739c32abae8501 288 Pfam PF15922 YjeJ-like 1 283 2.0E-111 T 29-03-2018 IPR031810 YjeJ-like CKQ55_RS21795 281c5e2df678054277fee83210e47ba3 336 Gene3D G3DSA:1.10.3470.10 35 331 7.3E-31 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS21795 281c5e2df678054277fee83210e47ba3 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 5.0E-49 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS10640 6fd9f2533bf99d9f3670c0bdd96b0aca 48 Pfam PF08085 Entericidin EcnA/B family 23 43 1.3E-8 T 29-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CKQ55_RS02655 e615b72d30162dd691154e56ddbd3316 67 Gene3D G3DSA:3.40.630.30 1 67 2.7E-4 T 29-03-2018 CKQ55_RS26515 365135eb7ae893e9403280cf7133a92b 160 Pfam PF00583 Acetyltransferase (GNAT) family 51 129 5.7E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CKQ55_RS26515 365135eb7ae893e9403280cf7133a92b 160 Gene3D G3DSA:3.40.630.30 2 158 3.9E-26 T 29-03-2018 CKQ55_RS26515 365135eb7ae893e9403280cf7133a92b 160 SUPERFAMILY SSF55729 1 151 5.49E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CKQ55_RS22385 e9e7add07375636c7c0f194ec69648e7 91 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 85 2.2E-10 T 29-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CKQ55_RS26445 090e81d6f96d82cec3b32d60ad03fc93 222 Pfam PF01914 MarC family integral membrane protein 5 217 3.3E-67 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CKQ55_RS26445 090e81d6f96d82cec3b32d60ad03fc93 222 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 213 1.8E-36 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CKQ55_RS22295 803bb9abe0f7468508b9fccf44600b0f 168 Pfam PF05926 Phage head completion protein (GPL) 30 168 1.8E-49 T 29-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 CKQ55_RS10600 59021ff696acd75a78eaa7c161dfa1e4 500 Pfam PF13520 Amino acid permease 9 458 6.3E-31 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS10600 59021ff696acd75a78eaa7c161dfa1e4 500 PIRSF PIRSF006060 1 499 3.0E-59 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CKQ55_RS23725 d59899701cf5b1e4f3a78f12cc269522 315 Pfam PF03547 Membrane transport protein 6 157 3.1E-18 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CKQ55_RS23725 d59899701cf5b1e4f3a78f12cc269522 315 Pfam PF03547 Membrane transport protein 168 306 2.1E-14 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CKQ55_RS12575 1f8c7bbe1f459cf8a90ff857d9611a1b 184 Gene3D G3DSA:3.40.50.300 9 183 1.2E-12 T 29-03-2018 CKQ55_RS12575 1f8c7bbe1f459cf8a90ff857d9611a1b 184 SUPERFAMILY SSF52540 9 171 2.62E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CKQ55_RS31210 25195f873bec8d0e5d10a1e0a3226063 245 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 22 245 1.7E-69 T 29-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CKQ55_RS31210 25195f873bec8d0e5d10a1e0a3226063 245 Pfam PF05857 TraX protein 29 244 8.6E-41 T 29-03-2018 IPR008875 TraX CKQ55_RS21470 9cf57573c2791a061a8c9526d012948a 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 92 512 4.1E-168 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ55_RS21470 9cf57573c2791a061a8c9526d012948a 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 53 512 5.0E-203 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ55_RS22945 43802d6df5cd2e760171d4c0f44c6151 243 Pfam PF04982 HPP family 62 181 4.6E-40 T 29-03-2018 IPR007065 HPP CKQ55_RS19095 17331233d08a77fad5a2732cd3f4e85f 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 224 248 2.4E-5 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19095 17331233d08a77fad5a2732cd3f4e85f 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.4E-5 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS19095 17331233d08a77fad5a2732cd3f4e85f 608 Pfam PF00361 Proton-conducting membrane transporter 150 404 1.3E-37 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CKQ55_RS21210 ca53e463a2c405db7e0d3f720d1c3678 176 Gene3D G3DSA:1.10.443.10 4 176 3.7E-29 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS21210 ca53e463a2c405db7e0d3f720d1c3678 176 SUPERFAMILY SSF56349 6 173 7.65E-33 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CKQ55_RS21210 ca53e463a2c405db7e0d3f720d1c3678 176 Pfam PF00589 Phage integrase family 7 172 9.4E-33 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CKQ55_RS10845 d77eaae51cdc0017c53a40fda32c3e87 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.8E-154 T 29-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CKQ55_RS10845 d77eaae51cdc0017c53a40fda32c3e87 354 PIRSF PIRSF007313 1 354 2.6E-159 T 29-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CKQ55_RS31785 0374c9a2c5a75ace1ea1bf0dbe3cce12 118 SUPERFAMILY SSF51306 1 112 2.96E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CKQ55_RS31785 0374c9a2c5a75ace1ea1bf0dbe3cce12 118 Gene3D G3DSA:2.10.109.10 2 118 4.2E-8 T 29-03-2018 CKQ55_RS23280 a28df28c77318164935bfa72e6dbb620 310 Pfam PF07670 Nucleoside recognition 19 93 1.6E-5 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS00925 d4f9da2c06bfb92e4ada2cffbed6eb92 75 Pfam PF07119 Protein of unknown function (DUF1375) 49 69 2.7E-5 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 CKQ55_RS00925 d4f9da2c06bfb92e4ada2cffbed6eb92 75 Pfam PF07119 Protein of unknown function (DUF1375) 8 42 3.4E-4 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 CKQ55_RS13260 3e96e097c42a32b4144e62e5e6220005 114 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 108 2.2E-23 T 29-03-2018 IPR009241 Toxin HigB-like CKQ55_RS09205 92f91fe2740d7b3f6caad4add7def439 155 Pfam PF07670 Nucleoside recognition 30 105 1.2E-5 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CKQ55_RS31575 86e76c2a4b4a0b10ae0d8e52411957a8 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 386 442 1.4E-6 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CKQ55_RS31575 86e76c2a4b4a0b10ae0d8e52411957a8 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 473 620 9.2E-25 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CKQ55_RS31575 86e76c2a4b4a0b10ae0d8e52411957a8 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 40 302 1.3E-36 T 29-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CKQ55_RS06435 4d1d7e6ae86911746146abf5b14790dd 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.6E-93 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CKQ55_RS06435 4d1d7e6ae86911746146abf5b14790dd 375 SUPERFAMILY SSF51713 1 364 1.24E-163 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CKQ55_RS06435 4d1d7e6ae86911746146abf5b14790dd 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 4.0E-191 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CKQ55_RS06435 4d1d7e6ae86911746146abf5b14790dd 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.767 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CKQ55_RS06435 4d1d7e6ae86911746146abf5b14790dd 375 Gene3D G3DSA:3.20.20.105 1 369 3.5E-160 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CKQ55_RS06435 4d1d7e6ae86911746146abf5b14790dd 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 4.2E-181 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CKQ55_RS28370 1d68e40230d9ab3ca4f38ff38d236dd4 75 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 8.9E-31 T 29-03-2018 IPR010696 Protein of unknown function DUF1272 CKQ55_RS25150 d1a376d48eb60a9d59686d973fac8ff5 401 Pfam PF07690 Major Facilitator Superfamily 207 376 1.8E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CKQ55_RS25150 d1a376d48eb60a9d59686d973fac8ff5 401 Gene3D G3DSA:1.20.1250.20 5 199 1.9E-16 T 29-03-2018 CKQ55_RS25150 d1a376d48eb60a9d59686d973fac8ff5 401 SUPERFAMILY SSF103473 10 381 1.96E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CKQ55_RS25150 d1a376d48eb60a9d59686d973fac8ff5 401 Gene3D G3DSA:1.20.1250.20 203 394 4.5E-24 T 29-03-2018 CKQ55_RS14180 17e053ef5945a21cb7f62cd5d938b675 300 SUPERFAMILY SSF161098 93 280 7.06E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14180 17e053ef5945a21cb7f62cd5d938b675 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 6.2E-16 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CKQ55_RS14180 17e053ef5945a21cb7f62cd5d938b675 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 3.3E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS14180 17e053ef5945a21cb7f62cd5d938b675 300 Gene3D G3DSA:1.10.3720.10 20 287 1.7E-47 T 29-03-2018 CKQ55_RS25300 fc8cb8743f3b9b7a7746fbe84a829926 584 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 579 1.4E-170 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS25300 fc8cb8743f3b9b7a7746fbe84a829926 584 Pfam PF05947 Type VI secretion system, TssF 6 581 1.1E-186 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS25300 fc8cb8743f3b9b7a7746fbe84a829926 584 PIRSF PIRSF028304 1 583 3.1E-161 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like CKQ55_RS07465 8d12b562e563c4b1651601f544ddd8c3 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 35.999 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CKQ55_RS07465 8d12b562e563c4b1651601f544ddd8c3 135 Pfam PF16358 RcsF lipoprotein 28 133 5.3E-50 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CKQ55_RS03815 5d779e4815c3d581beca447fde1a9ec1 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 4.8E-33 T 29-03-2018 IPR019663 Uncharacterised protein YbfA CKQ55_RS20060 9086e04282321d1a58f10e02d4aa31f6 140 Pfam PF07681 DoxX 16 97 2.2E-17 T 29-03-2018 IPR032808 DoxX family CKQ55_RS07695 5e2291cfc9eeeda2fc857f23b3bafab1 309 Pfam PF04754 Putative transposase, YhgA-like 8 209 3.9E-84 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CKQ55_RS07695 5e2291cfc9eeeda2fc857f23b3bafab1 309 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 301 1.1E-56 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CKQ55_RS17055 4bc503cdbb3537ddc18fd4e2f563c254 238 Pfam PF04474 Protein of unknown function (DUF554) 3 230 2.8E-66 T 29-03-2018 IPR007563 Protein of unknown function DUF554 CKQ55_RS05255 d8cb57da163d7e0d4f6b239acb070091 379 Gene3D G3DSA:1.20.120.330 21 222 2.3E-4 T 29-03-2018 CKQ55_RS25075 e409b64bd30098f078ae2ab732f1cc1f 361 Pfam PF00296 Luciferase-like monooxygenase 11 323 1.7E-73 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS25075 e409b64bd30098f078ae2ab732f1cc1f 361 SUPERFAMILY SSF51679 12 350 5.63E-79 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CKQ55_RS25075 e409b64bd30098f078ae2ab732f1cc1f 361 Gene3D G3DSA:3.20.20.30 1 360 1.0E-74 T 29-03-2018 CKQ55_RS03590 760494e7170ce18f2af0defbb8cb37c1 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 9.2E-94 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CKQ55_RS03590 760494e7170ce18f2af0defbb8cb37c1 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 5.2E-42 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CKQ55_RS30745 342b211bc6a119e0f71e6f862c0af8f6 144 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 5 144 8.9E-69 T 29-03-2018 IPR009385 Plasmid SOS inhibition CKQ55_RS09115 dd01ed5548d7868861b21b67ab6c6b7f 716 Pfam PF02554 Carbon starvation protein CstA 34 405 1.3E-161 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CKQ55_RS09115 dd01ed5548d7868861b21b67ab6c6b7f 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.5E-33 T 29-03-2018 IPR025299 CstA, C-terminal domain CKQ55_RS23560 0b88daa7f9935b93f3f03a60a6bb173f 167 Gene3D G3DSA:1.20.1260.10 3 166 2.3E-20 T 29-03-2018 IPR012347 Ferritin-related CKQ55_RS23560 0b88daa7f9935b93f3f03a60a6bb173f 167 Pfam PF00210 Ferritin-like domain 8 142 3.2E-19 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CKQ55_RS23560 0b88daa7f9935b93f3f03a60a6bb173f 167 SUPERFAMILY SSF47240 4 158 1.77E-27 T 29-03-2018 IPR009078 Ferritin-like superfamily CKQ55_RS18370 38e6b2f0eff52841d97aa36f0485a5c0 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 216 4.5E-56 T 29-03-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 CKQ55_RS18370 38e6b2f0eff52841d97aa36f0485a5c0 225 Pfam PF02361 Cobalt transport protein 10 221 1.0E-51 T 29-03-2018 IPR003339 ABC/ECF transporter, transmembrane component CKQ55_RS29625 ab055e01a3641f1bb434306185fda632 115 Pfam PF10729 Cell division activator CedA 37 113 3.1E-46 T 29-03-2018 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 396 411 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 341 359 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 123 142 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 365 383 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 221 237 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 31 56 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 269 1.3E-22 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 SUPERFAMILY SSF56235 4 527 2.89E-150 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CKQ55_RS01310 73e938498c56f6435665d2e92770fe8d 527 Pfam PF01019 Gamma-glutamyltranspeptidase 24 522 7.1E-127 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CKQ55_RS22695 a86fc9de334d408129e55dc9f1de4e93 255 Pfam PF01061 ABC-2 type transporter 12 214 4.5E-15 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CKQ55_RS26465 4394b19694b2778f08b8a6fa4d39daae 426 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 417 4.4E-12 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CKQ55_RS26135 ed96d303030116c22443c03b08d13fc5 141 Hamap MF_00546 Acid shock protein [asr]. 1 141 18.491 T 29-03-2018 IPR023497 Acid shock protein CKQ55_RS19085 8268b54f3372305879fe70001862b401 149 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 3.1E-73 T 29-03-2018 IPR021285 Transcription regulator, HycA CKQ55_RS26980 2251997c7a54bd6695b49b7ab4b31150 72 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 61 7.3E-25 T 29-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system CKQ55_RS25850 2b9ed06f6697c6fe6fd2f8d9e9b9e59f 229 Pfam PF01988 VIT family 14 221 7.8E-53 T 29-03-2018 IPR008217 Ccc1 family CKQ55_RS00565 b5ac744b92e204bc495339b4a6512ba6 285 SUPERFAMILY SSF161098 6 274 1.59E-52 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS00565 b5ac744b92e204bc495339b4a6512ba6 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 6.9E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS00565 b5ac744b92e204bc495339b4a6512ba6 285 Gene3D G3DSA:1.10.3720.10 9 284 2.1E-42 T 29-03-2018 CKQ55_RS08925 1d880052b9052556f99beee450e7f930 164 Pfam PF10696 Protein of unknown function (DUF2501) 83 162 1.8E-25 T 29-03-2018 IPR019637 Protein of unknown function DUF2501 CKQ55_RS27085 342c582e9aa2431a826aee440e65c7ff 186 Pfam PF06042 Nucleotidyltransferase 23 181 4.0E-56 T 29-03-2018 IPR009267 Putative nucleotidyltransferase CKQ55_RS23290 fe634dfebde5e59477ccf759ebcc1a27 321 Pfam PF01757 Acyltransferase family 97 309 4.0E-8 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CKQ55_RS22370 639245b8c888b40ec6723c689fff38f5 357 Pfam PF12571 Phage tail-collar fibre protein 1 148 2.8E-45 T 29-03-2018 IPR022225 Phage tail fibre protein CKQ55_RS00275 667863b0faf31215799fb766c0c44c89 578 Pfam PF03354 Phage Terminase 89 556 5.6E-68 T 29-03-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type CKQ55_RS08620 d572e5e7c0e77e40cd78e8468dc23569 134 Pfam PF10807 Protein of unknown function (DUF2541) 3 132 1.0E-65 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI CKQ55_RS08620 d572e5e7c0e77e40cd78e8468dc23569 134 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 17 134 5.0E-54 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI CKQ55_RS08620 d572e5e7c0e77e40cd78e8468dc23569 134 Hamap MF_01372 UPF0412 protein YaaI [yaaI]. 1 134 41.078 T 29-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI CKQ55_RS16660 560a2daaa1fe354f21aa62c0402b0f4a 535 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 36 444 1.8E-9 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CKQ55_RS24880 168b412abc0d1b3c7b71af4f582062b0 82 Pfam PF04226 Transglycosylase associated protein 33 81 2.0E-15 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CKQ55_RS11910 0b181f8969c85b4fc32903ec1d2ad974 396 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 36 365 1.3E-128 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CKQ55_RS04360 9ac99764a27c09a1a2192852c233b0ed 413 Gene3D G3DSA:2.130.10.10 3 411 5.8E-6 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CKQ55_RS04360 9ac99764a27c09a1a2192852c233b0ed 413 SUPERFAMILY SSF50969 120 403 1.1E-7 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CKQ55_RS09775 88d5876ca62e43d618e9f3b4f59554c2 307 Pfam PF13737 Transposase DDE domain 19 130 2.4E-45 T 29-03-2018 IPR025668 Transposase DDE domain CKQ55_RS23405 99c4c51190cc93ac24ea108e44d67159 303 PIRSF PIRSF016660 1 303 1.0E-123 T 29-03-2018 IPR008526 Inner membrane protein YedI CKQ55_RS23405 99c4c51190cc93ac24ea108e44d67159 303 Pfam PF05661 Protein of unknown function (DUF808) 4 290 2.2E-113 T 29-03-2018 IPR008526 Inner membrane protein YedI CKQ55_RS05480 08bd91d4290a977c839c29720e87539f 399 PIRSF PIRSF029215 1 398 6.0E-74 T 29-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 CKQ55_RS05480 08bd91d4290a977c839c29720e87539f 399 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 17 182 8.2E-38 T 29-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 CKQ55_RS05965 52ace536fdf0984264d63b857e637153 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 3.0E-63 T 29-03-2018 IPR019693 Biofilm formation regulator YbaJ CKQ55_RS10725 7f9387745553a6e5f0dcae7c9d296439 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 2.3E-32 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CKQ55_RS18840 401db0154ae56b889146f9ee0023874f 68 Pfam PF15959 Domain of unknown function (DUF4762) 1 62 2.8E-28 T 29-03-2018 IPR031882 Protein of unknown function DUF4762 CKQ55_RS00395 f3a67059fc5dfcb455fc53c400bc7d4b 59 Pfam PF13973 Domain of unknown function (DUF4222) 4 54 7.8E-19 T 29-03-2018 IPR025317 Protein of unknown function DUF4222 CKQ55_RS00025 f3a67059fc5dfcb455fc53c400bc7d4b 59 Pfam PF13973 Domain of unknown function (DUF4222) 4 54 7.8E-19 T 29-03-2018 IPR025317 Protein of unknown function DUF4222 CKQ55_RS21480 797f01ae8092faff1fd6824fdc16052f 217 Pfam PF09850 Type VI secretion system protein DotU 10 203 5.2E-42 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CKQ55_RS21480 797f01ae8092faff1fd6824fdc16052f 217 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 207 1.7E-44 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU CKQ55_RS06255 dc1a6593d4212af283fb171eacc6d085 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site CKQ55_RS06255 dc1a6593d4212af283fb171eacc6d085 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 7.8E-93 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CKQ55_RS06255 dc1a6593d4212af283fb171eacc6d085 295 Pfam PF01040 UbiA prenyltransferase family 18 266 1.1E-61 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CKQ55_RS06255 dc1a6593d4212af283fb171eacc6d085 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.146 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CKQ55_RS19700 5f449ebe6dee5d823b3f5dffdc784b7f 113 Gene3D G3DSA:3.30.1450.10 37 107 5.6E-10 T 29-03-2018 CKQ55_RS19700 5f449ebe6dee5d823b3f5dffdc784b7f 113 Pfam PF04355 SmpA / OmlA family 35 104 3.3E-27 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CKQ55_RS19700 5f449ebe6dee5d823b3f5dffdc784b7f 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 33.586 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE CKQ55_RS29575 de75e33c558c0173a809aa9b4ef4c457 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.2E-98 T 29-03-2018 IPR009627 Uncharacterised protein family UPF0259 CKQ55_RS29575 de75e33c558c0173a809aa9b4ef4c457 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 246 22.36 T 29-03-2018 IPR009627 Uncharacterised protein family UPF0259 CKQ55_RS10795 d726a61f4e4a16d32e8195b59ff8f7b9 260 Pfam PF13462 Thioredoxin 87 228 9.7E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS10795 d726a61f4e4a16d32e8195b59ff8f7b9 260 SUPERFAMILY SSF52833 78 256 2.81E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS10795 d726a61f4e4a16d32e8195b59ff8f7b9 260 Gene3D G3DSA:3.40.30.10 77 260 3.1E-26 T 29-03-2018 CKQ55_RS23425 074e8080e37d41a1e021d088253a04b2 62 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.763 T 29-03-2018 IPR019717 Dextransucrase DSRB CKQ55_RS23425 074e8080e37d41a1e021d088253a04b2 62 Pfam PF10781 Dextransucrase DSRB 1 59 1.6E-36 T 29-03-2018 IPR019717 Dextransucrase DSRB CKQ55_RS31525 353c6d52533215e81012b2358f28440e 72 Pfam PF07362 Post-segregation antitoxin CcdA 2 72 9.8E-26 T 29-03-2018 IPR009956 Post-segregation antitoxin CcdA CKQ55_RS01750 fe43068a81e5ef9fbd7838e112d83910 259 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 3 258 9.7E-83 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS31230 b785530503c8f19a13f17d1baefae069 92 Pfam PF10723 Replication regulatory protein RepB 1 81 3.7E-38 T 29-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 CKQ55_RS13485 40295304fb2bf0c3a32243a4de5aed91 489 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 322 406 6.8E-21 T 29-03-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain CKQ55_RS13485 40295304fb2bf0c3a32243a4de5aed91 489 Pfam PF04326 Putative DNA-binding domain 23 145 1.2E-13 T 29-03-2018 IPR007421 Schlafen, AAA domain GO:0005524 CKQ55_RS22240 cd128f9f40d649e4f2fb2d7037f7ff17 91 Pfam PF17399 Domain of unknown function (DUF5405) 7 87 2.4E-11 T 29-03-2018 IPR035404 Domain of unknown function DUF5405 CKQ55_RS22240 cd128f9f40d649e4f2fb2d7037f7ff17 91 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 3 78 5.0E-23 T 29-03-2018 IPR020284 Protein of unknown function CP83 CKQ55_RS02345 673ac610f68ab183892f5708b10d2206 171 Pfam PF12883 Protein of unknown function (DUF3828) 40 154 1.4E-20 T 29-03-2018 IPR024289 Domain of unknown function DUF3828 CKQ55_RS13380 9d3263c8dba829736d3f3b34873717ec 454 Pfam PF02321 Outer membrane efflux protein 271 436 1.2E-29 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS13380 9d3263c8dba829736d3f3b34873717ec 454 Pfam PF02321 Outer membrane efflux protein 58 240 3.5E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CKQ55_RS13380 9d3263c8dba829736d3f3b34873717ec 454 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 452 2.7E-113 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CKQ55_RS13380 9d3263c8dba829736d3f3b34873717ec 454 Gene3D G3DSA:1.20.1600.10 17 454 8.0E-92 T 29-03-2018 CKQ55_RS13380 9d3263c8dba829736d3f3b34873717ec 454 SUPERFAMILY SSF56954 2 452 6.67E-101 T 29-03-2018 CKQ55_RS10150 aad4c67fd7574e5e8e3084fee9cb6564 130 Pfam PF14107 Domain of unknown function (DUF4280) 6 124 2.5E-31 T 29-03-2018 IPR025460 Protein of unknown function DUF4280 CKQ55_RS21350 3fd9c4cf15f9679841229e6a9da1bcb4 355 SUPERFAMILY SSF51695 29 353 1.12E-93 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CKQ55_RS21350 3fd9c4cf15f9679841229e6a9da1bcb4 355 Gene3D G3DSA:3.20.20.190 27 353 4.0E-65 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CKQ55_RS21350 3fd9c4cf15f9679841229e6a9da1bcb4 355 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 347 2.6E-76 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CKQ55_RS26710 1c16b81a28330b3f6d4c8dac2d764392 179 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 33 167 1.1E-12 T 29-03-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase CKQ55_RS04105 9e3444e34e26a42bde228a05a6f244f7 196 Pfam PF04390 Lipopolysaccharide-assembly 42 159 9.5E-16 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CKQ55_RS04105 9e3444e34e26a42bde228a05a6f244f7 196 Gene3D G3DSA:3.30.160.150 19 173 2.3E-49 T 29-03-2018 CKQ55_RS04105 9e3444e34e26a42bde228a05a6f244f7 196 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 26.248 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CKQ55_RS10990 48b960fe9ba9d5105658c648705f5628 136 Pfam PF03788 LrgA family 31 122 2.0E-25 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 CKQ55_RS06555 1440b441fecd8b9d50a0a85579bfe295 232 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 229 9.3E-69 T 29-03-2018 IPR018648 Protein of unknown function DUF2076 CKQ55_RS07025 779b6cb0b8da5973c96a47bf4ee5af60 214 Gene3D G3DSA:1.10.3720.10 1 212 5.7E-24 T 29-03-2018 CKQ55_RS07025 779b6cb0b8da5973c96a47bf4ee5af60 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 201 1.8E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS07025 779b6cb0b8da5973c96a47bf4ee5af60 214 SUPERFAMILY SSF161098 11 198 4.84E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CKQ55_RS09605 738d1482b499a5a4109f471666102560 68 Gene3D G3DSA:1.10.10.10 15 67 1.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CKQ55_RS09605 738d1482b499a5a4109f471666102560 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 58 3.8E-10 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CKQ55_RS00200 7bf1320e4c5a888c4cf39b0d9846d232 161 Pfam PF08875 Domain of unknown function (DUF1833) 3 148 1.6E-43 T 29-03-2018 IPR014974 Domain of unknown function DUF1833 CKQ55_RS19350 ebea8168f3b15764db5e0f93508b3cc6 248 Pfam PF03591 AzlC protein 27 168 4.9E-38 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease CKQ55_RS08270 7ea39197b002101b32e2f616c4c200cc 50 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 7 47 9.9E-15 T 29-03-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 CKQ55_RS05980 a828991d2f3f93c481a0321015a454e1 156 Pfam PF10777 Inner membrane protein YlaC 1 151 1.4E-66 T 29-03-2018 IPR019713 Inner membrane protein YlaC CKQ55_RS00920 045b72a77bf409d7ab9e2fee4d4ddbd9 128 Pfam PF13984 MsyB protein 7 128 6.7E-61 T 29-03-2018 IPR025729 MsyB protein CKQ55_RS05460 3ac49f0c5ce3187def2337e1fc6918bf 138 Pfam PF13262 Protein of unknown function (DUF4054) 13 125 1.3E-28 T 29-03-2018 IPR025127 Protein of unknown function DUF4054 CKQ55_RS23810 7ef4713a14428719ee66c5cc378521e6 776 Pfam PF00577 Outer membrane usher protein 223 684 9.9E-25 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CKQ55_RS23810 7ef4713a14428719ee66c5cc378521e6 776 Pfam PF13953 PapC C-terminal domain 703 760 1.5E-10 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CKQ55_RS30970 4bc76a74911fdf6022c424c13fe730fa 168 Pfam PF07275 Antirestriction protein (ArdA) 10 166 3.6E-35 T 29-03-2018 IPR009899 Antirestriction CKQ55_RS22405 e06a88d24cac2763319c58f65ddd4fb1 385 SUPERFAMILY SSF69279 15 187 2.15E-25 T 29-03-2018 CKQ55_RS22405 e06a88d24cac2763319c58f65ddd4fb1 385 Gene3D G3DSA:3.55.50.10 113 224 2.8E-7 T 29-03-2018 CKQ55_RS22405 e06a88d24cac2763319c58f65ddd4fb1 385 Pfam PF05954 Phage late control gene D protein (GPD) 43 364 7.0E-42 T 29-03-2018 CKQ55_RS14475 7d2ec31f9134946b4c43f3c974b39d77 498 Pfam PF01384 Phosphate transporter family 30 487 1.3E-84 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CKQ55_RS05550 781a21403f60d079a4ad36fe50489e4c 55 Pfam PF05322 NINE Protein 18 52 5.3E-11 T 29-03-2018 IPR007986 NINE CKQ55_RS13135 08123240ffdcdbb3e8e60fb13c437246 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 76 2.1E-11 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 CKQ55_RS21570 8ce4daf90a3cf2359df83c2fcc83da8a 180 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 21 169 5.0E-37 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CKQ55_RS21570 8ce4daf90a3cf2359df83c2fcc83da8a 180 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 13 161 7.5E-27 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CKQ55_RS00320 ee66aa86e1d0fc08b3eb4217d30b477f 92 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 87 3.8E-28 T 29-03-2018 IPR008473 Putative 3TM holin, Phage holin 3 CKQ55_RS05365 c261b4888caed486033887465ec66a83 192 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 2.8E-34 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CKQ55_RS13620 0da418e11c191cedbc5a7e3c1a1f3fff 142 Pfam PF05656 Protein of unknown function (DUF805) 8 132 6.5E-20 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CKQ55_RS23275 76a05b475416a9dd30f7e5a9d0def453 513 Gene3D G3DSA:3.40.50.1820 55 357 3.6E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23275 76a05b475416a9dd30f7e5a9d0def453 513 SUPERFAMILY SSF53474 91 274 9.95E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23275 76a05b475416a9dd30f7e5a9d0def453 513 SUPERFAMILY SSF53474 313 353 9.95E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CKQ55_RS23275 76a05b475416a9dd30f7e5a9d0def453 513 Pfam PF12146 Serine aminopeptidase, S33 129 351 9.6E-12 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CKQ55_RS05670 1135274cc960ee1f2044c96eddf80265 52 Pfam PF07026 Protein of unknown function (DUF1317) 1 51 8.4E-23 T 29-03-2018 IPR009750 Protein of unknown function DUF1317 CKQ55_RS24250 42177cb23dd7fc720d51023775d16133 164 SUPERFAMILY SSF58113 31 117 7.59E-5 T 29-03-2018 CKQ55_RS24250 42177cb23dd7fc720d51023775d16133 164 Gene3D G3DSA:1.20.120.20 21 156 1.6E-8 T 29-03-2018 CKQ55_RS02155 a4e3a7f62579bc9fe86750a15ad1e47f 91 Gene3D G3DSA:3.40.50.2300 1 91 3.2E-14 T 29-03-2018 CKQ55_RS02155 a4e3a7f62579bc9fe86750a15ad1e47f 91 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 2.4E-11 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS02155 a4e3a7f62579bc9fe86750a15ad1e47f 91 SUPERFAMILY SSF52794 1 89 1.1E-13 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CKQ55_RS16235 2c7ecf2de0e89c29ce624258c5e8adc2 155 Gene3D G3DSA:3.40.930.10 1 144 6.3E-26 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS16235 2c7ecf2de0e89c29ce624258c5e8adc2 155 SUPERFAMILY SSF55804 6 141 3.27E-28 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CKQ55_RS16235 2c7ecf2de0e89c29ce624258c5e8adc2 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 142 4.0E-25 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CKQ55_RS27145 373e78f5909a63e02af6d985155bb1de 436 SUPERFAMILY SSF56322 11 433 3.66E-95 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS27145 373e78f5909a63e02af6d985155bb1de 436 Gene3D G3DSA:3.60.120.10 10 435 4.3E-83 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CKQ55_RS27145 373e78f5909a63e02af6d985155bb1de 436 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 16 432 4.7E-195 T 29-03-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CKQ55_RS27145 373e78f5909a63e02af6d985155bb1de 436 Pfam PF00425 chorismate binding enzyme 173 424 1.1E-68 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CKQ55_RS06955 d18d3839ae4c3810c9b63bc530d8e880 182 Pfam PF10554 Ash protein family 22 130 1.6E-24 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein CKQ55_RS30400 88b63aed5418d68ce4133624f209d894 205 Gene3D G3DSA:1.10.1220.10 148 173 2.2E-15 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CKQ55_RS11290 819a2286757cdbc0ba61a7cf55d98953 309 Pfam PF01758 Sodium Bile acid symporter family 37 213 6.7E-40 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CKQ55_RS31010 da2e87815123c947780a79f6e2f92fe3 242 Pfam PF06952 PsiA protein 1 237 5.6E-85 T 29-03-2018 IPR009713 Uncharacterised protein family PsiA CKQ55_RS00940 55728c2f30c9d3cb10199613c7da6349 386 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 2 375 37.756 T 29-03-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 CKQ55_RS00940 55728c2f30c9d3cb10199613c7da6349 386 Pfam PF01757 Acyltransferase family 11 357 3.4E-32 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CKQ55_RS05535 880d6ff679f20e594dbbdc4fb1e87cf9 46 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 5 43 2.0E-7 T 29-03-2018 CKQ55_RS13180 ad89716b4603ea4b1f3c87494da0f091 176 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 12 176 1.0E-36 T 29-03-2018 CKQ55_RS08950 c728697041d4433f7eda245fec086cef 279 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 17 279 8.3E-103 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CKQ55_RS25635 c054ece9e47768a93e72e5139a473f17 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 3.8E-19 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 CKQ55_RS05855 e5243ba1047791dbb4518de57882d54d 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 134 1.1E-30 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CKQ55_RS09790 052c4a5e47827a7d12cf05d4f9cf4a80 200 Pfam PF08747 Domain of unknown function (DUF1788) 66 187 2.3E-35 T 29-03-2018 IPR014858 Protein of unknown function DUF1788 CKQ55_RS10280 f4c5f02742dd2db5f2997b7155c19869 1258 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 922 1258 1.2E-67 T 29-03-2018 IPR007452 Translocation and assembly module TamB CKQ55_RS06105 2b394fb1232025a6c1dc35ed5d9fcbab 169 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 46 150 9.9E-42 T 29-03-2018 CKQ55_RS03620 83c8a7c103e104497b1059d9666b73d2 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.3E-173 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS03620 83c8a7c103e104497b1059d9666b73d2 522 PIRSF PIRSF006446 1 328 2.9E-114 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS03620 83c8a7c103e104497b1059d9666b73d2 522 PIRSF PIRSF006446 345 521 6.7E-29 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CKQ55_RS20100 aad381e4946a54186924ce064a1b0f03 326 Pfam PF03824 High-affinity nickel-transport protein 72 179 1.3E-22 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CKQ55_RS20100 aad381e4946a54186924ce064a1b0f03 326 Pfam PF03824 High-affinity nickel-transport protein 185 315 1.3E-16 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CKQ55_RS21630 5fc54dedf1ebfab78b9dd47fa89bb313 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 3.0E-54 T 29-03-2018 IPR020489 Uncharacterised protein family YejG CKQ55_RS21630 5fc54dedf1ebfab78b9dd47fa89bb313 114 Pfam PF13989 YejG-like protein 4 108 1.0E-50 T 29-03-2018 IPR020489 Uncharacterised protein family YejG CKQ55_RS05695 81227512ee80e4099907e437c666b493 79 Pfam PF13973 Domain of unknown function (DUF4222) 4 52 7.4E-15 T 29-03-2018 IPR025317 Protein of unknown function DUF4222 CKQ55_RS02295 2958963dae6c5f938c10c457c3282b79 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 1.0E-71 T 29-03-2018 IPR005642 Lysine exporter LysO CKQ55_RS02295 2958963dae6c5f938c10c457c3282b79 299 Pfam PF03956 Lysine exporter LysO 113 297 5.6E-58 T 29-03-2018 IPR005642 Lysine exporter LysO CKQ55_RS29970 c2c3554ff7b8f3019bb7a3c46e218eb8 79 Pfam PF03891 Domain of unknown function (DUF333) 28 74 4.6E-17 T 29-03-2018 IPR005590 Protein of unknown function DUF333 CKQ55_RS31185 06816c798b1897a39d003fffad4992c5 940 Pfam PF07916 TraG-like protein, N-terminal region 3 444 5.0E-110 T 29-03-2018 IPR012931 TraG-like, N-terminal CKQ55_RS24760 66f82d00f3039099c5c63144f2d55922 252 Pfam PF04338 Protein of unknown function, DUF481 47 251 2.3E-56 T 29-03-2018 IPR007433 Protein of unknown function DUF481 CKQ55_RS19405 164166efe2adf2b41d0cb04dc827636f 116 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 5.5E-60 T 29-03-2018 IPR018994 Protein of unknown function DUF2002 CKQ55_RS19405 164166efe2adf2b41d0cb04dc827636f 116 SUPERFAMILY SSF159894 1 111 2.04E-58 T 29-03-2018 CKQ55_RS31595 1878aaf12d109bc8562a21836634fcc2 96 Pfam PF04956 TrbC/VIRB2 family 3 94 5.6E-20 T 29-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CKQ55_RS21660 dbdd164cb1030ae73776fc34e84625a2 189 Pfam PF00877 NlpC/P60 family 80 184 2.6E-33 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CKQ55_RS21660 dbdd164cb1030ae73776fc34e84625a2 189 Gene3D G3DSA:3.90.1720.10 64 189 7.0E-40 T 29-03-2018 CKQ55_RS21660 dbdd164cb1030ae73776fc34e84625a2 189 SUPERFAMILY SSF54001 68 186 1.18E-39 T 29-03-2018 CKQ55_RS02080 6ec4f69c84f7afbd6a499adce26fe2d3 409 Pfam PF06224 Winged helix DNA-binding domain 38 381 1.4E-81 T 29-03-2018 IPR009351 Protein of unknown function DUF1006 CKQ55_RS28585 af9be5ec1f2f93dd0d2147ece9805cbe 107 PIRSF PIRSF025560 1 107 1.3E-38 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CKQ55_RS28585 af9be5ec1f2f93dd0d2147ece9805cbe 107 Pfam PF07027 Protein of unknown function (DUF1318) 18 107 3.8E-29 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CKQ55_RS12565 83c07aec807c825b1dad53a8d91ebd35 219 Pfam PF03591 AzlC protein 19 154 9.3E-30 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease CKQ55_RS09505 ac1a3523b301dc63b68075b3eb93399f 143 SUPERFAMILY SSF143744 32 137 2.35E-21 T 29-03-2018 CKQ55_RS09505 ac1a3523b301dc63b68075b3eb93399f 143 Pfam PF03928 Haem-degrading 30 137 1.5E-18 T 29-03-2018 IPR005624 Haem-degrading CKQ55_RS31120 d630c750d43376bcd530c1e972d51ca8 188 Pfam PF07296 TraP protein 8 157 3.3E-27 T 29-03-2018 IPR009913 TraP CKQ55_RS18125 7e7c00a09481c00a307f077e7fb7dc06 137 Pfam PF10713 Protein of unknown function (DUF2509) 15 134 2.7E-33 T 29-03-2018 IPR019652 Protein of unknown function DUF2509 CKQ55_RS17880 922a54af36db733a370cefa355e8af86 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 378 3.0E-7 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CKQ55_RS27175 651883a4020d5bee41e7c6eac9914c0b 427 TIGRFAM TIGR00814 stp: serine transporter 16 416 1.4E-181 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CKQ55_RS25790 7a03cbaa69d31bff382562e24414d70c 403 Pfam PF04143 Sulphur transport 237 387 3.5E-23 T 29-03-2018 IPR007272 Sulphur transport domain CKQ55_RS25790 7a03cbaa69d31bff382562e24414d70c 403 Pfam PF04143 Sulphur transport 4 160 2.8E-26 T 29-03-2018 IPR007272 Sulphur transport domain CKQ55_RS16365 4fd6428211ac7f56cfe6402866749f6d 220 Pfam PF09335 SNARE associated Golgi protein 48 174 8.3E-22 T 29-03-2018 IPR032816 SNARE associated Golgi protein CKQ55_RS31165 030a26e3aa62b4f948926e55af96e160 82 TIGRFAM TIGR02741 TraQ: type-F conjugative transfer system pilin chaperone TraQ 1 82 1.0E-42 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CKQ55_RS31165 030a26e3aa62b4f948926e55af96e160 82 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 1 72 7.0E-21 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CKQ55_RS28635 41f7b85bfd3e36660f056bbd6d0fa75a 130 Pfam PF16931 Putative phage holin 1 125 3.9E-42 T 29-03-2018 IPR032637 Putative phage holin-like CKQ55_RS00325 035d4cbe01d082be601c82ecbd69baab 129 Pfam PF16931 Putative phage holin 1 124 5.6E-43 T 29-03-2018 IPR032637 Putative phage holin-like CKQ55_RS02855 65ce952073b498c7636400da0c247112 46 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 5 43 6.0E-6 T 29-03-2018 CKQ55_RS29390 fe0de444b3e20015f9efddae1648271f 60 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 60 22.128 T 29-03-2018 IPR020887 Uncharacterised protein family UPF0509 CKQ55_RS20445 30b94a3463245af68834a303ad098876 355 Pfam PF06674 Protein of unknown function (DUF1176) 26 348 2.0E-90 T 29-03-2018 IPR009560 Protein of unknown function DUF1176 CKQ55_RS29960 3f02707f9424414c773826715b0beaff 169 Pfam PF04463 Protein of unknown function (DUF523) 5 150 1.0E-39 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CKQ55_RS23420 099c2ccfebe930df8b649346ec43816c 71 Pfam PF10733 Protein of unknown function (DUF2525) 14 71 4.2E-33 T 29-03-2018 IPR019669 Uncharacterised bacterial stress protein YodD CKQ55_RS10880 2bf0fb916a7f93844c25fc91d18d6c87 110 Gene3D G3DSA:1.10.287.620 18 108 1.5E-4 T 29-03-2018 CKQ55_RS26280 cfbe6aed1da1fbb74adf466b44dcec55 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.0E-58 T 29-03-2018 IPR018636 Protein of unknown function DUF2058 CKQ55_RS24865 cc9b17f9774cdc09b3e3d5c3b92451c9 373 Pfam PF01594 AI-2E family transporter 15 344 7.4E-58 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CKQ55_RS29965 2a6ad64c88d59adab1f152a63c500bc4 114 Pfam PF04343 Protein of unknown function, DUF488 4 111 4.7E-32 T 29-03-2018 IPR007438 Protein of unknown function DUF488 CKQ55_RS07800 3b22e7ed6f0871a552e796a0631ce8a6 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 240 1.5E-40 T 29-03-2018 IPR022792 Type II secretion system, protein N CKQ55_RS00245 195e4a3c3f48932c6ef7c5e9c942b3f4 112 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 108 8.8E-17 T 29-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CKQ55_RS00245 195e4a3c3f48932c6ef7c5e9c942b3f4 112 Pfam PF05521 Phage head-tail joining protein 7 106 5.2E-22 T 29-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CKQ55_RS14735 aff21f73d5c7fd24e7ec3ac9211924d2 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 116 3.6E-29 T 29-03-2018 IPR019635 Protein of unknown function DUF2500 CKQ55_RS00190 fb6acfc5ab9cef24c9515c9997a3f6e1 1027 Pfam PF13550 Putative phage tail protein 798 904 2.1E-5 T 29-03-2018 IPR032876 Tip attachment protein J CKQ55_RS28960 9fa4be53e507fb1c6c4dc06444a744b6 86 Pfam PF05488 PAAR motif 9 76 2.4E-17 T 29-03-2018 IPR008727 PAAR motif CKQ55_RS17105 d1e2398e8bb8ab0c12d40e993ca81563 167 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 155 2.9E-30 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CKQ55_RS04790 4e255e056fa481f52f804f12a336ccc0 246 Pfam PF01203 Type II secretion system (T2SS), protein N 36 239 1.1E-39 T 29-03-2018 IPR022792 Type II secretion system, protein N CKQ55_RS23370 06ca0edbd04aaa25670b1b519f1c1327 129 Pfam PF04138 GtrA-like protein 16 126 3.3E-17 T 29-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CKQ55_RS16745 36bebedddc177d00392859e51ade3052 93 Pfam PF04380 Membrane fusogenic activity 1 77 5.2E-29 T 29-03-2018 IPR007475 Membrane fusogenic activity CKQ55_RS00800 84322fdeb939e7cc540b2f94cc19bb7b 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 3.8E-19 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CKQ55_RS06545 6faf990409b24976760929843656c625 63 Pfam PF16362 YaiA protein 1 63 6.1E-39 T 29-03-2018 IPR032303 YaiA protein CKQ55_RS30710 b39660644023f9cea3bb1e1031530709 224 Pfam PF13708 Domain of unknown function (DUF4942) 30 217 2.4E-48 T 29-03-2018 IPR031339 Domain of unknown function DUF4942 CKQ55_RS22015 7a1d1805e8f4638a0e1c946cb055356e 250 Gene3D G3DSA:1.10.150.130 74 250 0.0038 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CKQ55_RS31180 92c0abb8de34fa1628943af42cc95708 456 Pfam PF06122 Conjugative relaxosome accessory transposon protein 29 377 3.3E-113 T 29-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CKQ55_RS06940 af1b9dc75dabd77465f91c7426ad7e19 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 1 244 1.0E-69 T 29-03-2018 CKQ55_RS06865 52a576c1924007b79c371c62a3847a2d 595 SUPERFAMILY SSF52833 504 593 9.23E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold CKQ55_RS06865 52a576c1924007b79c371c62a3847a2d 595 Gene3D G3DSA:3.40.30.10 491 595 2.3E-13 T 29-03-2018 CKQ55_RS06865 52a576c1924007b79c371c62a3847a2d 595 Pfam PF00085 Thioredoxin 505 591 3.5E-8 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CKQ55_RS06865 52a576c1924007b79c371c62a3847a2d 595 Pfam PF05935 Arylsulfotransferase (ASST) 91 382 9.8E-22 T 29-03-2018 IPR010262 Arylsulfotransferase, C-terminal CKQ55_RS11235 e36dd990c3e14112371135e00848fac2 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 102 4.1E-16 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CKQ55_RS05275 a3fb958c90cc9c32f108ae094f82d2b1 325 Gene3D G3DSA:1.10.10.60 1 44 3.2E-8 T 29-03-2018 CKQ55_RS03245 2398dcf1b5b2c9f11871ad6a39b4505e 145 Pfam PF11076 Putative inner membrane protein YbhQ 1 127 9.4E-70 T 29-03-2018 IPR021303 Uncharacterised protein family, inner membrane, YbhQ CKQ55_RS14810 4c8983fe7849a79b3da135d52892ab29 308 Gene3D G3DSA:1.10.3470.10 4 299 1.6E-52 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CKQ55_RS14810 4c8983fe7849a79b3da135d52892ab29 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.4E-68 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CKQ55_RS24175 c4a9819253d36b6bfa9ac992edc7fa81 309 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 3.9E-79 T 29-03-2018 IPR007296 Domain of unknown function DUF403 CKQ55_RS03945 84d5893701f97f3fbadc935e2cf3162a 110 Pfam PF13982 YbfN-like lipoprotein 21 107 1.2E-48 T 29-03-2018 IPR025727 YbfN-like lipoprotein CKQ55_RS19665 b241d06a0c932a3e6c85f2e90691bb16 188 Pfam PF07455 Phage polarity suppression protein (Psu) 6 186 5.1E-67 T 29-03-2018 IPR010006 Bacteriophage P4, Psu, polarity suppression protein CKQ55_RS19665 b241d06a0c932a3e6c85f2e90691bb16 188 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 62 173 4.0E-5 T 29-03-2018 CKQ55_RS05380 7f3aae956d9e6a64150c00e924b50d09 399 Pfam PF04865 Baseplate J-like protein 86 342 1.9E-11 T 29-03-2018 IPR006949 Baseplate protein J-like CKQ55_RS00680 30aa0f3e27478ff46ead12e518f914f7 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 1.0E-11 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CKQ55_RS23915 b64af9522b2c3e6d9494d9e3edff2ca3 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 7.5E-28 T 29-03-2018 IPR019672 Protein of unknown function DUF2627 CKQ55_RS27970 a9711c9d13d42fec4e567f7426766ad0 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 76 2.4E-39 T 29-03-2018 IPR019671 Protein of unknown function DUF2526 CKQ55_RS06570 0d6246a4f36fe18d8211c64542647cb8 106 Pfam PF07769 psiF repeat 71 103 1.6E-16 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CKQ55_RS06570 0d6246a4f36fe18d8211c64542647cb8 106 Pfam PF07769 psiF repeat 27 59 2.0E-19 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CKQ55_RS18070 70a3d5ace77ed0a7980b9de62062e4d9 237 Pfam PF03741 Integral membrane protein TerC family 17 203 1.1E-52 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CKQ55_RS10985 58639bf714003462d16ab9dfcccbb87c 229 Pfam PF04172 LrgB-like family 14 224 2.0E-68 T 29-03-2018 IPR007300 CidB/LrgB family CKQ55_RS14685 6f355f515408de52cd3ba1b915a1e1c7 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 237 5.5E-65 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CKQ55_RS04400 4ed694b2a8365580244d2dc65fb97408 65 Pfam PF04328 Selenoprotein, putative 5 65 5.8E-29 T 29-03-2018 IPR007423 Selenoprotein, putative CKQ55_RS05440 7adca231cb042f64b5ab1d19fad2cfe4 381 Pfam PF11863 Protein of unknown function (DUF3383) 7 92 4.0E-23 T 29-03-2018 IPR021808 Protein of unknown function DUF3383 CKQ55_RS05440 7adca231cb042f64b5ab1d19fad2cfe4 381 Pfam PF11863 Protein of unknown function (DUF3383) 97 379 1.1E-95 T 29-03-2018 IPR021808 Protein of unknown function DUF3383 CKQ55_RS27525 1efbbc766e19d7be04baaa94020fa358 170 Gene3D G3DSA:3.10.450.160 33 170 3.0E-26 T 29-03-2018 CKQ55_RS21530 86ea2332e76db336e8489a663175f819 88 Pfam PF05488 PAAR motif 9 80 3.4E-23 T 29-03-2018 IPR008727 PAAR motif CKQ55_RS07085 66377ba78c3521f962895ae6daec1ed3 446 Pfam PF04966 Carbohydrate-selective porin, OprB family 72 446 3.4E-83 T 29-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 CKQ55_RS02390 2b68ad7485295b0bbfb72a18344e6526 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 4.5E-59 T 29-03-2018 IPR019703 Protein of unknown function DUF2593 CKQ55_RS00220 aa29e7155e220e1d1d24ae632448d7fe 101 Pfam PF13227 Protein of unknown function (DUF4035) 35 82 1.9E-12 T 29-03-2018 IPR025116 Protein of unknown function DUF4035 CKQ55_RS01345 9b8b37ab18aacd73a23a9c2a12a5bb39 495 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 32 465 1.5E-85 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CKQ55_RS00235 31736a8ee7d663726fa8807d301e68d8 115 Pfam PF11367 Protein of unknown function (DUF3168) 11 90 4.4E-8 T 29-03-2018 IPR021508 Tail completion protein CKQ55_RS24200 3c62c1beb1b1bb95f2a3855bb62d2e6e 327 Pfam PF00487 Fatty acid desaturase 56 289 2.3E-30 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CKQ55_RS21160 d8d4929497f2ee559a8f97bc99df0271 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 8.2E-21 T 29-03-2018 CKQ55_RS21160 d8d4929497f2ee559a8f97bc99df0271 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.51 T 29-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CKQ55_RS13020 537bb3f02080998255ad08601246c4e1 245 Gene3D G3DSA:3.90.470.20 4 140 2.8E-14 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CKQ55_RS12110 b0611e9ffb71ce42d0f96430e994ee06 112 Pfam PF04219 Protein of unknown function, DUF 10 98 4.2E-41 T 29-03-2018 IPR007335 Protein of unknown function DUF413 CKQ55_RS00250 16b0da60aa391e7c4f40f8678105aa1f 110 Pfam PF05135 Phage gp6-like head-tail connector protein 9 105 4.0E-9 T 29-03-2018 IPR021146 Phage gp6-like head-tail connector protein CKQ55_RS05630 836f152fccffb4510abc8665ab20a3cc 258 Pfam PF08861 Domain of unknown function DUF1828 30 108 2.7E-11 T 29-03-2018 IPR014960 Domain of unknown function DUF1828 CKQ55_RS21545 1dd4891824dc2ae906271635c38ff706 120 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 119 6.8E-20 T 29-03-2018 IPR010657 ImpA, N-terminal CKQ55_RS16345 6c60caef07e5a3e5633d6bb3e62bddc7 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.0E-18 T 29-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CKQ55_RS10945 0a0e8eca507a5a27b9c343d452f5d342 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 6.3E-34 T 29-03-2018 IPR007436 Protein of unknown function DUF485 CKQ55_RS31335 486f61f7db481356b282bf8a1c4d2347 99 Pfam PF10056 Uncharacterized conserved protein (DUF2293) 17 94 4.5E-10 T 29-03-2018 IPR018744 Domain of unknown function DUF2293