locus-tag	class	description
JMZ78_RS00020	COG0187	DNA topoisomerase II activity
JMZ78_RS00025	COG0561	phosphatase activity
JMZ78_RS00040	COG2186	Transcriptional regulator
JMZ78_RS00045	COG3734	2-keto-3-deoxy-galactonokinase
JMZ78_RS00050	COG0800	Aldolase
JMZ78_RS00060	COG2271	Major facilitator Superfamily
JMZ78_RS00065	COG0823	Involved in the tonB-independent uptake of proteins
JMZ78_RS00070	COG5645	(Lipo)protein
JMZ78_RS00085	COG3645	SOS response
JMZ78_RS00095	COG2188	Transcriptional regulator
JMZ78_RS00110	COG2149	membrane
JMZ78_RS00130	COG2610	gluconate transmembrane transporter activity
JMZ78_RS00140	COG0583	DNA-binding transcription factor activity
JMZ78_RS00145	COG2814	Major facilitator Superfamily
JMZ78_RS00175	COG0028	Belongs to the TPP enzyme family
JMZ78_RS00180	COG0440	acetolactate synthase activity
JMZ78_RS00185	COG2197	response regulator
JMZ78_RS00195	COG2271	Major facilitator Superfamily
JMZ78_RS00235	COG2188	Transcriptional regulator
JMZ78_RS00260	COG4580	involved in the transport of maltose and maltodextrins
JMZ78_RS00265	COG1447	Phosphotransferase system cellobiose-specific component IIA
JMZ78_RS00270	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS00270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS00280	COG1609	Transcriptional regulator
JMZ78_RS00290	COG3384	dioxygenase
JMZ78_RS00295	COG0583	DNA-binding transcription factor activity
JMZ78_RS00300	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JMZ78_RS00305	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JMZ78_RS00310	COG2828	Protein conserved in bacteria
JMZ78_RS00325	COG0697	spore germination
JMZ78_RS00330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS00330	COG1263	PTS System
JMZ78_RS00340	COG2814	Major facilitator Superfamily
JMZ78_RS00350	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JMZ78_RS00385	COG0583	DNA-binding transcription factor activity
JMZ78_RS00410	COG1464	Belongs to the NlpA lipoprotein family
JMZ78_RS00425	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JMZ78_RS00435	COG1064	alcohol dehydrogenase
JMZ78_RS00465	COG2211	Major facilitator Superfamily
JMZ78_RS00470	COG1501	Belongs to the glycosyl hydrolase 31 family
JMZ78_RS00480	COG1486	melibiose metabolic process
JMZ78_RS00485	COG1263	PTS System
JMZ78_RS00485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS00490	COG2982	Protein involved in outer membrane biogenesis
JMZ78_RS00495	COG2233	PERMEase
JMZ78_RS00500	COG0786	glutamate:sodium symporter activity
JMZ78_RS00520	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JMZ78_RS00545	COG3152	Membrane
JMZ78_RS00555	COG1494	fructose-1,6-bisphosphatase
JMZ78_RS00560	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JMZ78_RS00565	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JMZ78_RS00570	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JMZ78_RS00590	COG2860	membrane
JMZ78_RS00600	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JMZ78_RS00600	COG2169	Transcriptional regulator
JMZ78_RS00605	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JMZ78_RS00610	COG1561	YicC-like family, N-terminal region
JMZ78_RS00630	COG1131	(ABC) transporter
JMZ78_RS00635	COG0842	Transport permease protein
JMZ78_RS00660	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JMZ78_RS00695	COG1519	Transferase
JMZ78_RS00700	COG1216	Glycosyl transferase, family 2
JMZ78_RS00705	COG0438	transferase activity, transferring glycosyl groups
JMZ78_RS00715	COG0859	PFAM glycosyl transferase family 9
JMZ78_RS00740	COG0859	PFAM glycosyl transferase family 9
JMZ78_RS00755	COG0156	8-amino-7-oxononanoate synthase activity
JMZ78_RS00765	COG0463	Glycosyl transferase, family 2
JMZ78_RS00770	COG2861	carbohydrate metabolic process
JMZ78_RS00775	COG4942	peptidase
JMZ78_RS00785	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JMZ78_RS00790	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JMZ78_RS00810	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JMZ78_RS00820	COG2186	Transcriptional regulator
JMZ78_RS00840	COG3722	fumarate hydratase activity
JMZ78_RS00860	COG1566	PFAM secretion protein HlyD family protein
JMZ78_RS00865	COG0625	glutathione transferase activity
JMZ78_RS00875	COG3276	selenocysteine insertion sequence binding
JMZ78_RS00880	COG1414	Transcriptional regulator
JMZ78_RS00885	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JMZ78_RS00890	COG3977	Valine--pyruvate aminotransferase
JMZ78_RS00895	COG0366	Alpha amylase catalytic
JMZ78_RS00900	COG2992	FlgJ-related protein
JMZ78_RS00905	COG1609	Transcriptional regulator
JMZ78_RS00905	COG2207	Transcriptional regulator
JMZ78_RS00910	COG4214	carbohydrate transport
JMZ78_RS00920	COG4213	ABC transporter substrate-binding protein
JMZ78_RS00935	COG4682	membrane
JMZ78_RS00940	COG4682	membrane
JMZ78_RS00945	COG3274	enterobacterial common antigen metabolic process
JMZ78_RS00980	COG1278	Cold shock
JMZ78_RS00985	COG2944	sequence-specific DNA binding
JMZ78_RS00990	COG2814	Major facilitator Superfamily
JMZ78_RS01010	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS01020	COG1609	Transcriptional regulator
JMZ78_RS01025	COG2885	chlorophyll binding
JMZ78_RS01030	COG0243	molybdopterin cofactor binding
JMZ78_RS01035	COG0456	acetyltransferase
JMZ78_RS01040	COG2818	Glycosylase
JMZ78_RS01045	COG5571	outer membrane autotransporter
JMZ78_RS01050	COG2223	nitrite transmembrane transporter activity
JMZ78_RS01080	COG0747	negative chemotaxis
JMZ78_RS01085	COG0601	transmembrane transport
JMZ78_RS01090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS01095	COG0444	Belongs to the ABC transporter superfamily
JMZ78_RS01100	COG4608	Belongs to the ABC transporter superfamily
JMZ78_RS01125	COG1215	transferase activity, transferring glycosyl groups
JMZ78_RS01130	COG0457	Tetratricopeptide repeat
JMZ78_RS01145	COG2194	sulfuric ester hydrolase activity
JMZ78_RS01175	COG1215	transferase activity, transferring glycosyl groups
JMZ78_RS01180	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JMZ78_RS01185	COG3118	belongs to the thioredoxin family
JMZ78_RS01185	COG0457	Tetratricopeptide repeat
JMZ78_RS01190	COG2199	diguanylate cyclase activity
JMZ78_RS01190	COG2200	EAL domain
JMZ78_RS01200	COG0612	Peptidase, M16
JMZ78_RS01210	COG2982	Protein involved in outer membrane biogenesis
JMZ78_RS01215	COG0477	Major facilitator Superfamily
JMZ78_RS01220	COG1295	ribonuclease BN
JMZ78_RS01225	COG0583	DNA-binding transcription factor activity
JMZ78_RS01230	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS01235	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JMZ78_RS01245	COG1454	alcohol dehydrogenase
JMZ78_RS01255	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JMZ78_RS01260	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JMZ78_RS01265	COG0671	phosphoesterase, PA-phosphatase related
JMZ78_RS01285	COG0589	response to stress
JMZ78_RS01295	COG0306	phosphate transporter
JMZ78_RS01300	COG2081	HI0933 family
JMZ78_RS01305	COG2239	Acts as a magnesium transporter
JMZ78_RS01315	COG1124	(ABC) transporter
JMZ78_RS01325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS01330	COG0601	transmembrane transport
JMZ78_RS01335	COG0747	negative chemotaxis
JMZ78_RS01345	COG3479	Phenolic acid decarboxylase
JMZ78_RS01385	COG0628	permease
JMZ78_RS01390	COG0477	Major facilitator Superfamily
JMZ78_RS01400	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JMZ78_RS01415	COG3714	YhhN family
JMZ78_RS01425	COG3776	membrane
JMZ78_RS01430	COG0742	ribosomal rna small subunit methyltransferase
JMZ78_RS01435	COG0552	protein localization to endoplasmic reticulum
JMZ78_RS01440	COG2884	Cell division ATP-binding protein ftsE
JMZ78_RS01445	COG2177	Part of the ABC transporter FtsEX involved in
JMZ78_RS01460	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JMZ78_RS01470	COG0683	leucine binding
JMZ78_RS01480	COG0683	leucine binding
JMZ78_RS01485	COG0559	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS01535	COG0584	glycerophosphoryl diester phosphodiesterase
JMZ78_RS01545	COG0405	Gamma-glutamyltransferase
JMZ78_RS01550	COG1247	-acetyltransferase
JMZ78_RS01560	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS01565	COG1741	Belongs to the pirin family
JMZ78_RS01570	COG1609	Transcriptional regulator
JMZ78_RS01575	COG3265	gluconokinase activity
JMZ78_RS01580	COG2610	gluconate transmembrane transporter activity
JMZ78_RS01590	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JMZ78_RS01615	COG0058	SHG alpha-glucan phosphorylase activity
JMZ78_RS01630	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JMZ78_RS01645	COG1349	DNA-binding transcription factor activity
JMZ78_RS01655	COG0058	SHG alpha-glucan phosphorylase activity
JMZ78_RS01660	COG1640	4-alpha-glucanotransferase
JMZ78_RS01665	COG2610	gluconate transmembrane transporter activity
JMZ78_RS01675	COG1040	competence protein
JMZ78_RS01700	COG1918	ferrous iron import across plasma membrane
JMZ78_RS01705	COG2183	response to ionizing radiation
JMZ78_RS01710	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JMZ78_RS01735	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JMZ78_RS01740	COG1011	Hydrolase
JMZ78_RS01750	COG0494	nUDIX hydrolase
JMZ78_RS01755	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JMZ78_RS01780	COG4796	Type ii and iii secretion system protein
JMZ78_RS01795	COG3266	domain, Protein
JMZ78_RS01800	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JMZ78_RS01805	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JMZ78_RS01830	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JMZ78_RS01835	COG0402	S-adenosylhomocysteine deaminase activity
JMZ78_RS01840	COG0738	Major facilitator superfamily
JMZ78_RS01865	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JMZ78_RS01870	COG1289	transmembrane transporter activity
JMZ78_RS01880	COG1765	OsmC-like protein
JMZ78_RS01885	COG3954	Phosphoribulokinase
JMZ78_RS01910	COG0488	(ABC) transporter
JMZ78_RS01925	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
JMZ78_RS01930	COG1047	Peptidyl-prolyl cis-trans
JMZ78_RS01940	COG0545	Peptidyl-prolyl cis-trans isomerase
JMZ78_RS01945	COG2964	Protein conserved in bacteria
JMZ78_RS02000	COG0051	transcription antitermination factor activity, RNA binding
JMZ78_RS02025	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JMZ78_RS02040	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JMZ78_RS02105	COG0201	protein transport
JMZ78_RS02130	COG0202	RNA polymerase activity
JMZ78_RS02145	COG0789	Transcriptional regulator
JMZ78_RS02150	COG3036	rescue of stalled ribosome
JMZ78_RS02180	COG0758	DNA mediated transformation
JMZ78_RS02190	COG0551	DNA topoisomerase type I activity
JMZ78_RS02210	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JMZ78_RS02245	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JMZ78_RS02250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS02255	COG1309	transcriptional regulator
JMZ78_RS02260	COG0582	viral genome integration into host DNA
JMZ78_RS02275	COG3561	AntA/AntB antirepressor
JMZ78_RS02360	COG1802	Transcriptional regulator
JMZ78_RS02360	COG4626	Terminase
JMZ78_RS02385	COG4145	pantothenate transmembrane transporter activity
JMZ78_RS02390	COG3924	membrane
JMZ78_RS02395	COG0439	Biotin carboxylase
JMZ78_RS02400	COG0511	ligase activity, forming carbon-carbon bonds
JMZ78_RS02425	COG2200	EAL domain
JMZ78_RS02425	COG2199	diguanylate cyclase activity
JMZ78_RS02430	COG1077	Cell shape determining protein MreB Mrl
JMZ78_RS02435	COG1792	Involved in formation and maintenance of cell shape
JMZ78_RS02440	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JMZ78_RS02450	COG1530	ribonuclease E activity
JMZ78_RS02455	COG3164	Protein of unknown function
JMZ78_RS02460	COG0312	modulator of DNA gyrase
JMZ78_RS02465	COG0583	DNA-binding transcription factor activity
JMZ78_RS02480	COG1289	transmembrane transporter activity
JMZ78_RS02485	COG2732	(Barnase) inhibitor
JMZ78_RS02510	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JMZ78_RS02515	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JMZ78_RS02520	COG3105	Protein conserved in bacteria
JMZ78_RS02525	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JMZ78_RS02545	COG0625	glutathione transferase activity
JMZ78_RS02550	COG2969	positive regulation of protein catabolic process
JMZ78_RS02560	COG0493	'glutamate synthase
JMZ78_RS02565	COG0069	glutamate synthase activity
JMZ78_RS02565	COG0067	glutamate synthase
JMZ78_RS02565	COG0070	glutamate synthase
JMZ78_RS02570	COG1242	4 iron, 4 sulfur cluster binding
JMZ78_RS02575	COG2271	Major facilitator Superfamily
JMZ78_RS02580	COG1063	alcohol dehydrogenase
JMZ78_RS02585	COG1312	Catalyzes the dehydration of D-mannonate
JMZ78_RS02590	COG5002	protein histidine kinase activity
JMZ78_RS02590	COG2198	Histidine kinase
JMZ78_RS02590	COG0784	Response regulator, receiver
JMZ78_RS02595	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JMZ78_RS02600	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JMZ78_RS02605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS02615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS02620	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JMZ78_RS02625	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JMZ78_RS02630	COG1137	ATPase activity
JMZ78_RS02635	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JMZ78_RS02640	COG3117	lipopolysaccharide transmembrane transporter activity
JMZ78_RS02645	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JMZ78_RS02655	COG0530	calcium, potassium:sodium antiporter activity
JMZ78_RS02660	COG1127	ABC transporter
JMZ78_RS02665	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JMZ78_RS02670	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JMZ78_RS02675	COG2854	intermembrane phospholipid transfer
JMZ78_RS02680	COG3113	response to antibiotic
JMZ78_RS02685	COG5007	Belongs to the BolA IbaG family
JMZ78_RS02695	COG3423	Transcriptional regulator
JMZ78_RS02700	COG0142	geranyltranstransferase activity
JMZ78_RS02715	COG0697	spore germination
JMZ78_RS02725	COG2027	D-alanyl-D-alanine carboxypeptidase
JMZ78_RS02735	COG1534	Rna-binding protein
JMZ78_RS02745	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JMZ78_RS02750	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JMZ78_RS02760	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JMZ78_RS02800	COG0195	Participates in both transcription termination and antitermination
JMZ78_RS02845	COG0814	amino acid
JMZ78_RS02850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS02855	COG0826	peptidase U32
JMZ78_RS02860	COG0826	peptidase U32
JMZ78_RS02865	COG3154	lipid carrier protein
JMZ78_RS02870	COG3153	acetyltransferase
JMZ78_RS02885	COG0693	protein deglycase activity
JMZ78_RS02890	COG0702	epimerase
JMZ78_RS02895	COG0701	Predicted permease
JMZ78_RS02900	COG2823	Periplasmic or secreted lipoprotein
JMZ78_RS02920	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JMZ78_RS02935	COG1063	alcohol dehydrogenase
JMZ78_RS02940	COG3775	system Galactitol-specific IIC component
JMZ78_RS02945	COG3414	Phosphotransferase system galactitol-specific IIB component
JMZ78_RS02950	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS02960	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS02960	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS02965	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS02965	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS02965	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS02970	COG1105	Belongs to the carbohydrate kinase PfkB family
JMZ78_RS02980	COG1349	DNA-binding transcription factor activity
JMZ78_RS02985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS02990	COG2721	sulfolactate sulfo-lyase activity
JMZ78_RS02995	COG2271	Major facilitator Superfamily
JMZ78_RS03005	COG2084	Dehydrogenase
JMZ78_RS03010	COG1929	Belongs to the glycerate kinase type-1 family
JMZ78_RS03035	COG1741	Belongs to the pirin family
JMZ78_RS03040	COG0583	DNA-binding transcription factor activity
JMZ78_RS03045	COG3152	Membrane
JMZ78_RS03050	COG0435	Glutathione S-transferase
JMZ78_RS03055	COG2259	Doxx family
JMZ78_RS03065	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
JMZ78_RS03070	COG4575	ribosome binding
JMZ78_RS03075	COG1422	Protein of unknown function (DUF1090)
JMZ78_RS03085	COG0586	Pfam SNARE associated Golgi protein
JMZ78_RS03090	COG2186	Transcriptional regulator
JMZ78_RS03095	COG2271	Major facilitator Superfamily
JMZ78_RS03105	COG2721	sulfolactate sulfo-lyase activity
JMZ78_RS03120	COG0861	Integral membrane protein TerC family
JMZ78_RS03125	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS03130	COG1451	nucleotide metabolic process
JMZ78_RS03150	COG0446	pyridine nucleotide-disulphide oxidoreductase
JMZ78_RS03150	COG1902	pentaerythritol trinitrate reductase activity
JMZ78_RS03200	COG1695	Transcriptional regulator
JMZ78_RS03205	COG2375	cellular response to nickel ion
JMZ78_RS03225	COG1461	Dihydroxyacetone kinase
JMZ78_RS03230	COG2376	Dihydroxyacetone kinase
JMZ78_RS03300	COG3247	response to pH
JMZ78_RS03310	COG0784	Response regulator, receiver
JMZ78_RS03310	COG2198	Histidine kinase
JMZ78_RS03310	COG2205	protein histidine kinase activity
JMZ78_RS03310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS03315	COG2197	response regulator
JMZ78_RS03340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JMZ78_RS03345	COG0358	DNA primase activity
JMZ78_RS03350	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JMZ78_RS03415	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JMZ78_RS03430	COG4991	sh3 domain protein
JMZ78_RS03435	COG3025	triphosphatase activity
JMZ78_RS03460	COG2960	long-chain fatty acid transporting porin activity
JMZ78_RS03475	COG3384	dioxygenase
JMZ78_RS03480	COG0754	glutathionylspermidine amidase activity
JMZ78_RS03495	COG0494	nUDIX hydrolase
JMZ78_RS03500	COG3151	Protein conserved in bacteria
JMZ78_RS03505	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JMZ78_RS03510	COG3150	esterase
JMZ78_RS03520	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JMZ78_RS03525	COG2249	NAD(P)H dehydrogenase (quinone) activity
JMZ78_RS03530	COG0642	Histidine kinase
JMZ78_RS03540	COG3111	PFAM Bacterial OB fold (BOF) protein
JMZ78_RS03545	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JMZ78_RS03550	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JMZ78_RS03555	COG0204	Acyl-transferase
JMZ78_RS03560	COG2132	Multicopper oxidase
JMZ78_RS03565	COG1032	radical SAM domain protein
JMZ78_RS03575	COG0656	L-ascorbic acid biosynthetic process
JMZ78_RS03580	COG1979	alcohol dehydrogenase
JMZ78_RS03585	COG2207	Transcriptional regulator
JMZ78_RS03590	COG0586	Pfam SNARE associated Golgi protein
JMZ78_RS03595	COG0626	cystathionine gamma-synthase activity
JMZ78_RS03605	COG0848	biopolymer transport protein
JMZ78_RS03610	COG2211	Major facilitator Superfamily
JMZ78_RS03635	COG0625	glutathione transferase activity
JMZ78_RS03650	COG0754	glutathionylspermidine amidase activity
JMZ78_RS03655	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JMZ78_RS03675	COG0583	DNA-binding transcription factor activity
JMZ78_RS03680	COG0626	cystathionine gamma-synthase activity
JMZ78_RS03935	COG3423	Transcriptional regulator
JMZ78_RS03945	COG1278	Cold shock
JMZ78_RS03950	COG3423	Transcriptional regulator
JMZ78_RS04020	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JMZ78_RS04030	COG1811	Na channel or pump
JMZ78_RS04035	COG1982	Orn Lys Arg decarboxylase major
JMZ78_RS04040	COG2211	Major facilitator Superfamily
JMZ78_RS04055	COG1194	a g-specific adenine glycosylase
JMZ78_RS04065	COG3171	Protein conserved in bacteria
JMZ78_RS04075	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JMZ78_RS04090	COG0762	integral membrane protein
JMZ78_RS04095	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JMZ78_RS04100	COG2805	Type II/IV secretion system protein
JMZ78_RS04120	COG0189	ligase activity
JMZ78_RS04125	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JMZ78_RS04130	COG2356	endonuclease I
JMZ78_RS04140	COG2814	Major facilitator Superfamily
JMZ78_RS04175	COG2146	nitrite reductase [NAD(P)H] activity
JMZ78_RS04190	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS04195	COG1414	Transcriptional regulator
JMZ78_RS04225	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS04230	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
JMZ78_RS04250	COG0501	Belongs to the peptidase M48B family
JMZ78_RS04255	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JMZ78_RS04270	COG0191	fructose-bisphosphate aldolase activity
JMZ78_RS04275	COG0668	transmembrane transport
JMZ78_RS04285	COG2968	Membrane
JMZ78_RS04300	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JMZ78_RS04305	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JMZ78_RS04325	COG0006	proline dipeptidase activity
JMZ78_RS04330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JMZ78_RS04335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JMZ78_RS04355	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS04360	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JMZ78_RS04380	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS04385	COG1737	Transcriptional regulator
JMZ78_RS04395	COG1272	protein, Hemolysin III
JMZ78_RS04405	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JMZ78_RS04415	COG0716	FMN binding
JMZ78_RS04420	COG4974	Belongs to the 'phage' integrase family
JMZ78_RS04430	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JMZ78_RS04450	COG4942	peptidase
JMZ78_RS04460	COG2814	Major facilitator Superfamily
JMZ78_RS04475	COG0667	Aldo Keto reductase
JMZ78_RS04510	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JMZ78_RS04515	COG1393	Belongs to the ArsC family
JMZ78_RS04530	COG1538	Outer membrane efflux protein
JMZ78_RS04535	COG1289	transmembrane transporter activity
JMZ78_RS04550	COG3592	Divergent 4Fe-4S mono-cluster
JMZ78_RS04555	COG2388	GCN5-related N-acetyl-transferase
JMZ78_RS04565	COG3539	Fimbrial protein
JMZ78_RS04570	COG3539	Fimbrial protein
JMZ78_RS04575	COG3539	Fimbrial protein
JMZ78_RS04580	COG3188	usher protein
JMZ78_RS04585	COG3121	Chaperone
JMZ78_RS04590	COG3539	Fimbrial protein
JMZ78_RS04600	COG4974	Belongs to the 'phage' integrase family
JMZ78_RS04610	COG0582	viral genome integration into host DNA
JMZ78_RS04615	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JMZ78_RS04620	COG1846	Transcriptional regulator
JMZ78_RS04625	COG0697	spore germination
JMZ78_RS04675	COG0667	Aldo Keto reductase
JMZ78_RS04680	COG0814	amino acid
JMZ78_RS04695	COG0183	Belongs to the thiolase family
JMZ78_RS04705	COG0823	Involved in the tonB-independent uptake of proteins
JMZ78_RS04710	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS04715	COG2814	Major facilitator Superfamily
JMZ78_RS04750	COG3842	ATPase activity
JMZ78_RS04755	COG0395	ABC-type sugar transport system, permease component
JMZ78_RS04760	COG1175	transmembrane transport
JMZ78_RS04765	COG1917	Cupin 2, conserved barrel domain protein
JMZ78_RS04770	COG1794	racemase activity, acting on amino acids and derivatives
JMZ78_RS04775	COG0583	DNA-binding transcription factor activity
JMZ78_RS04785	COG1609	Transcriptional regulator
JMZ78_RS04790	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS04795	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS04800	COG2186	Transcriptional regulator
JMZ78_RS04810	COG1609	Transcriptional regulator
JMZ78_RS04830	COG0667	Aldo Keto reductase
JMZ78_RS04840	COG0861	Integral membrane protein TerC family
JMZ78_RS04875	COG2165	general secretion pathway protein
JMZ78_RS04880	COG4795	General secretion pathway protein
JMZ78_RS04890	COG4967	type IV pilus modification protein PilV
JMZ78_RS04895	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JMZ78_RS04900	COG1025	Belongs to the peptidase M16 family
JMZ78_RS04905	COG1074	ATP-dependent DNA helicase activity
JMZ78_RS04910	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JMZ78_RS04920	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JMZ78_RS04920	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JMZ78_RS04925	COG0860	N-Acetylmuramoyl-L-alanine amidase
JMZ78_RS04930	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JMZ78_RS04960	COG4656	Part of a membrane complex involved in electron transport
JMZ78_RS04965	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS04965	COG1454	alcohol dehydrogenase
JMZ78_RS04995	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
JMZ78_RS05150	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JMZ78_RS05155	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JMZ78_RS05160	COG2166	iron-sulfur cluster assembly
JMZ78_RS05165	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JMZ78_RS05175	COG0583	DNA-binding transcription factor activity
JMZ78_RS05180	COG2363	Small membrane protein
JMZ78_RS05190	COG1349	DNA-binding transcription factor activity
JMZ78_RS05210	COG0738	Major facilitator superfamily
JMZ78_RS05215	COG0235	Class ii aldolase
JMZ78_RS05220	COG1454	alcohol dehydrogenase
JMZ78_RS05240	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS05255	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JMZ78_RS05260	COG2011	ABC-type metal ion transport system permease component
JMZ78_RS05265	COG1464	Belongs to the NlpA lipoprotein family
JMZ78_RS05270	COG0477	Major facilitator Superfamily
JMZ78_RS05280	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JMZ78_RS05285	COG1760	l-serine dehydratase
JMZ78_RS05290	COG0814	amino acid
JMZ78_RS05295	COG1611	Belongs to the LOG family
JMZ78_RS05310	COG3098	single-species biofilm formation
JMZ78_RS05315	COG0564	pseudouridine synthase activity
JMZ78_RS05320	COG0716	FMN binding
JMZ78_RS05325	COG2271	Major facilitator Superfamily
JMZ78_RS05330	COG4948	Mandelate Racemase Muconate Lactonizing
JMZ78_RS05335	COG4948	Mandelate Racemase Muconate Lactonizing
JMZ78_RS05340	COG1929	Belongs to the glycerate kinase type-1 family
JMZ78_RS05345	COG3437	response regulator, receiver
JMZ78_RS05345	COG2205	protein histidine kinase activity
JMZ78_RS05345	COG3850	Histidine kinase
JMZ78_RS05345	COG4999	Histidine kinase
JMZ78_RS05355	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JMZ78_RS05360	COG3956	TIGRFAM MazG family protein
JMZ78_RS05380	COG0602	queuosine metabolic process
JMZ78_RS05385	COG0720	synthase
JMZ78_RS05405	COG2234	aminopeptidase activity
JMZ78_RS05465	COG4942	peptidase
JMZ78_RS05465	COG1388	LysM domain
JMZ78_RS05470	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JMZ78_RS05495	COG0163	prenyltransferase activity
JMZ78_RS05500	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JMZ78_RS05540	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS05545	COG4558	Periplasmic binding protein
JMZ78_RS05550	COG3720	iron ion transport
JMZ78_RS05570	COG0679	Auxin Efflux Carrier
JMZ78_RS05585	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JMZ78_RS05590	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JMZ78_RS05595	COG1121	(ABC) transporter
JMZ78_RS05600	COG0803	Belongs to the bacterial solute-binding protein 9 family
JMZ78_RS05605	COG1609	Transcriptional regulator
JMZ78_RS05610	COG1940	carbohydrate kinase activity
JMZ78_RS05615	COG1447	Phosphotransferase system cellobiose-specific component IIA
JMZ78_RS05620	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS05625	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS05630	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS05635	COG4580	involved in the transport of maltose and maltodextrins
JMZ78_RS05645	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS05655	COG0309	Hydrogenase expression formation protein (HypE)
JMZ78_RS05660	COG0409	Hydrogenase expression formation protein
JMZ78_RS05665	COG0298	carbon dioxide binding
JMZ78_RS05670	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JMZ78_RS05685	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JMZ78_RS05690	COG0651	ATP synthesis coupled electron transport
JMZ78_RS05695	COG0650	Formate hydrogenlyase subunit 4
JMZ78_RS05700	COG3261	NADH dehydrogenase
JMZ78_RS05700	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
JMZ78_RS05705	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JMZ78_RS05710	COG3260	NADH ubiquinone oxidoreductase 20
JMZ78_RS05720	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JMZ78_RS05730	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS05735	COG1263	PTS System
JMZ78_RS05735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS05740	COG1609	Transcriptional regulator
JMZ78_RS05745	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JMZ78_RS05750	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
JMZ78_RS05755	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
JMZ78_RS05780	COG1349	DNA-binding transcription factor activity
JMZ78_RS05785	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS05790	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS05800	COG3732	PTS system glucitol sorbitol-specific
JMZ78_RS05805	COG3730	PTS system glucitol sorbitol-specific
JMZ78_RS05810	COG2951	lytic endotransglycosylase activity
JMZ78_RS05815	COG1121	(ABC) transporter
JMZ78_RS05820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JMZ78_RS05830	COG1546	Belongs to the CinA family
JMZ78_RS05850	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JMZ78_RS05880	COG2823	Periplasmic or secreted lipoprotein
JMZ78_RS05885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JMZ78_RS05890	COG1238	metal cluster binding
JMZ78_RS05910	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JMZ78_RS05915	COG2814	Major facilitator Superfamily
JMZ78_RS05920	COG1566	PFAM secretion protein HlyD family protein
JMZ78_RS05925	COG1846	Transcriptional regulator
JMZ78_RS05935	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JMZ78_RS05945	COG4176	ABC-type proline glycine betaine transport system permease component
JMZ78_RS05960	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JMZ78_RS05970	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JMZ78_RS05975	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JMZ78_RS05980	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JMZ78_RS05985	COG4575	ribosome binding
JMZ78_RS06000	COG2916	Histone family protein nucleoid-structuring protein H-NS
JMZ78_RS06015	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JMZ78_RS06020	COG0640	Transcriptional regulator
JMZ78_RS06030	COG0583	DNA-binding transcription factor activity
JMZ78_RS06035	COG3284	Transcriptional regulator
JMZ78_RS06045	COG3539	Fimbrial protein
JMZ78_RS06050	COG3121	Chaperone
JMZ78_RS06070	COG3188	usher protein
JMZ78_RS06080	COG3539	Fimbrial protein
JMZ78_RS06085	COG2197	response regulator
JMZ78_RS06100	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS06110	COG0235	Class ii aldolase
JMZ78_RS06120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS06155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS06160	COG3708	Transcriptional regulator
JMZ78_RS06160	COG2207	Transcriptional regulator
JMZ78_RS06190	COG2867	negative regulation of translational initiation
JMZ78_RS06205	COG0497	DNA recombination
JMZ78_RS06220	COG4536	flavin adenine dinucleotide binding
JMZ78_RS06225	COG4137	Cytochrome C assembly protein
JMZ78_RS06230	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JMZ78_RS06265	COG2885	chlorophyll binding
JMZ78_RS06270	COG2199	diguanylate cyclase activity
JMZ78_RS06280	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JMZ78_RS06285	COG0287	Prephenate dehydrogenase
JMZ78_RS06285	COG1605	Chorismate mutase
JMZ78_RS06295	COG0077	Prephenate dehydratase
JMZ78_RS06295	COG1605	Chorismate mutase
JMZ78_RS06305	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JMZ78_RS06310	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JMZ78_RS06325	COG0542	response to heat
JMZ78_RS06350	COG0477	Major facilitator Superfamily
JMZ78_RS06355	COG5544	Lipoprotein
JMZ78_RS06360	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JMZ78_RS06370	COG3148	PFAM DTW domain containing protein
JMZ78_RS06375	COG3118	belongs to the thioredoxin family
JMZ78_RS06380	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JMZ78_RS06395	COG0513	Belongs to the DEAD box helicase family
JMZ78_RS06405	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JMZ78_RS06420	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
JMZ78_RS06425	COG3026	antisigma factor binding
JMZ78_RS06430	COG3086	response to oxidative stress
JMZ78_RS06440	COG0681	Belongs to the peptidase S26 family
JMZ78_RS06460	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JMZ78_RS06470	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JMZ78_RS06475	COG1737	Transcriptional regulator
JMZ78_RS06480	COG0560	Phosphoserine phosphatase
JMZ78_RS06495	COG0047	phosphoribosylformylglycinamidine synthase activity
JMZ78_RS06495	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JMZ78_RS06500	COG2205	protein histidine kinase activity
JMZ78_RS06505	COG3170	Tfp pilus assembly protein FimV
JMZ78_RS06510	COG2204	response regulator
JMZ78_RS06515	COG0347	Belongs to the P(II) protein family
JMZ78_RS06520	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JMZ78_RS06520	COG1017	nitric oxide dioxygenase activity
JMZ78_RS06530	COG2259	Doxx family
JMZ78_RS06535	COG1940	carbohydrate kinase activity
JMZ78_RS06540	COG0457	Tetratricopeptide repeat
JMZ78_RS06545	COG2814	Major facilitator Superfamily
JMZ78_RS06545	COG0477	Major facilitator Superfamily
JMZ78_RS06550	COG2017	converts alpha-aldose to the beta-anomer
JMZ78_RS06555	COG2814	Major facilitator Superfamily
JMZ78_RS06560	COG3711	transcriptional antiterminator
JMZ78_RS06565	COG3683	transport system, periplasmic component
JMZ78_RS06570	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JMZ78_RS06600	COG0822	iron-sulfur transferase activity
JMZ78_RS06620	COG0633	Ferredoxin
JMZ78_RS06625	COG2975	iron-sulfur cluster assembly
JMZ78_RS06645	COG2897	thiosulfate sulfurtransferase activity
JMZ78_RS06650	COG2373	Large extracellular alpha-helical protein
JMZ78_RS06655	COG4953	penicillin-binding protein 1C
JMZ78_RS06685	COG2976	Protein conserved in bacteria
JMZ78_RS06705	COG1645	bacterial-type flagellum-dependent swarming motility
JMZ78_RS06715	COG0517	IMP dehydrogenase activity
JMZ78_RS06715	COG0516	GMP reductase activity
JMZ78_RS06760	COG3723	Recombinational DNA repair protein, rece pathway
JMZ78_RS06860	COG5484	DNA packaging
JMZ78_RS06860	COG3728	DNA packaging
JMZ78_RS06960	COG3617	BRO family, N-terminal domain
JMZ78_RS07005	COG3179	chitinase
JMZ78_RS07015	COG3119	arylsulfatase activity
JMZ78_RS07020	COG0641	radical SAM
JMZ78_RS07040	COG2200	EAL domain
JMZ78_RS07055	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JMZ78_RS07070	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS07080	COG2233	PERMEase
JMZ78_RS07095	COG1393	Belongs to the ArsC family
JMZ78_RS07100	COG4783	chaperone-mediated protein folding
JMZ78_RS07110	COG0628	permease
JMZ78_RS07115	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JMZ78_RS07120	COG2716	regulation of RNA biosynthetic process
JMZ78_RS07130	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JMZ78_RS07140	COG2321	neutral zinc metallopeptidase
JMZ78_RS07145	COG1444	tRNA N-acetyltransferase activity
JMZ78_RS07150	COG0400	carboxylic ester hydrolase activity
JMZ78_RS07165	COG1393	Belongs to the ArsC family
JMZ78_RS07175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JMZ78_RS07180	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JMZ78_RS07180	COG0493	'glutamate synthase
JMZ78_RS07190	COG5342	invasion associated locus B
JMZ78_RS07195	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JMZ78_RS07200	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JMZ78_RS07210	COG4810	utilization protein
JMZ78_RS07300	COG0860	N-Acetylmuramoyl-L-alanine amidase
JMZ78_RS07320	COG2837	iron assimilation
JMZ78_RS07330	COG4150	thiosulfate binding
JMZ78_RS07335	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JMZ78_RS07340	COG4208	sulfate ABC transporter
JMZ78_RS07345	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JMZ78_RS07355	COG4319	ketosteroid isomerase
JMZ78_RS07390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JMZ78_RS07410	COG3530	Putative quorum-sensing-regulated virulence factor
JMZ78_RS07415	COG0385	Bile acid
JMZ78_RS07420	COG0583	DNA-binding transcription factor activity
JMZ78_RS07450	COG3415	Transposase
JMZ78_RS07455	COG3415	Transposase
JMZ78_RS07470	COG2200	EAL domain
JMZ78_RS07470	COG2199	diguanylate cyclase activity
JMZ78_RS07475	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JMZ78_RS07490	COG0667	Aldo Keto reductase
JMZ78_RS07495	COG3961	Belongs to the TPP enzyme family
JMZ78_RS07510	COG3279	Response regulator of the LytR AlgR family
JMZ78_RS07515	COG3275	phosphorelay sensor kinase activity
JMZ78_RS07530	COG0436	Aminotransferase
JMZ78_RS07540	COG2807	transmembrane transport
JMZ78_RS07545	COG0590	tRNA wobble adenosine to inosine editing
JMZ78_RS07550	COG0583	DNA-binding transcription factor activity
JMZ78_RS07570	COG2116	formate transmembrane transporter activity
JMZ78_RS07575	COG2853	Lipoprotein
JMZ78_RS07585	COG3691	Protein conserved in bacteria
JMZ78_RS07600	COG2062	phosphohistidine phosphatase, SixA
JMZ78_RS07625	COG0730	response to heat
JMZ78_RS07630	COG3101	peptidyl-lysine hydroxylation
JMZ78_RS07645	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JMZ78_RS07665	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JMZ78_RS07675	COG0586	Pfam SNARE associated Golgi protein
JMZ78_RS07685	COG0285	dihydrofolate synthase activity
JMZ78_RS07690	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
JMZ78_RS07695	COG1286	toxin biosynthetic process
JMZ78_RS07700	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JMZ78_RS07705	COG0163	prenyltransferase activity
JMZ78_RS07730	COG4160	amino acid transport
JMZ78_RS07735	COG4598	ABC transporter
JMZ78_RS07750	COG1090	epimerase
JMZ78_RS07755	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JMZ78_RS07760	COG0625	glutathione transferase activity
JMZ78_RS07765	COG0625	glutathione transferase activity
JMZ78_RS07770	COG0622	Phosphoesterase
JMZ78_RS07775	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JMZ78_RS07780	COG0280	phosphate acetyltransferase
JMZ78_RS07780	COG0857	belongs to the CobB CobQ family
JMZ78_RS07800	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JMZ78_RS07805	COG0490	domain, Protein
JMZ78_RS07805	COG0471	metal ion transport
JMZ78_RS07815	COG0436	Aminotransferase
JMZ78_RS07820	COG0583	DNA-binding transcription factor activity
JMZ78_RS07865	COG0839	Belongs to the complex I subunit 6 family
JMZ78_RS07875	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JMZ78_RS07880	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JMZ78_RS07895	COG2153	protein acetylation
JMZ78_RS07900	COG1169	isochorismate synthase
JMZ78_RS07925	COG0318	PFAM AMP-dependent synthetase and ligase
JMZ78_RS07935	COG5464	transposase or invertase
JMZ78_RS07950	COG1414	Transcriptional regulator
JMZ78_RS07965	COG2271	Major facilitator Superfamily
JMZ78_RS07975	COG0247	lactate metabolic process
JMZ78_RS07985	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JMZ78_RS07990	COG2271	Major facilitator Superfamily
JMZ78_RS07995	COG0584	glycerophosphoryl diester phosphodiesterase
JMZ78_RS08000	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JMZ78_RS08025	COG2205	protein histidine kinase activity
JMZ78_RS08025	COG0784	Response regulator, receiver
JMZ78_RS08035	COG2198	Histidine kinase
JMZ78_RS08035	COG0642	Histidine kinase
JMZ78_RS08050	COG2169	Transcriptional regulator
JMZ78_RS08050	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JMZ78_RS08055	COG3145	DNA-N1-methyladenine dioxygenase activity
JMZ78_RS08060	COG4615	Cyclic peptide transporter
JMZ78_RS08065	COG2239	Acts as a magnesium transporter
JMZ78_RS08070	COG0659	secondary active sulfate transmembrane transporter activity
JMZ78_RS08085	COG0628	permease
JMZ78_RS08110	COG1349	DNA-binding transcription factor activity
JMZ78_RS08115	COG0494	nUDIX hydrolase
JMZ78_RS08135	COG1061	Type III restriction enzyme res subunit
JMZ78_RS08140	COG1187	pseudouridine synthase activity
JMZ78_RS08145	COG2814	Major facilitator Superfamily
JMZ78_RS08155	COG4172	Belongs to the ABC transporter superfamily
JMZ78_RS08160	COG4239	(ABC) transporter, permease
JMZ78_RS08165	COG4174	ABC transporter (Permease)
JMZ78_RS08170	COG4166	transmembrane transport
JMZ78_RS08175	COG2200	EAL domain
JMZ78_RS08180	COG0791	NLP P60 protein
JMZ78_RS08185	COG0671	phosphoesterase, PA-phosphatase related
JMZ78_RS08190	COG0523	cobalamin synthesis protein
JMZ78_RS08195	COG0246	Mannitol dehydrogenase
JMZ78_RS08200	COG1312	Catalyzes the dehydration of D-mannonate
JMZ78_RS08225	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS08225	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS08230	COG1105	Belongs to the carbohydrate kinase PfkB family
JMZ78_RS08235	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JMZ78_RS08235	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS08235	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS08245	COG2855	membrane
JMZ78_RS08250	COG0583	DNA-binding transcription factor activity
JMZ78_RS08255	COG0833	amino acid
JMZ78_RS08260	COG4771	TonB-dependent receptor
JMZ78_RS08275	COG2311	Membrane
JMZ78_RS08290	COG1129	ABC transporter
JMZ78_RS08300	COG2949	membrane
JMZ78_RS08310	COG1346	cytolysis
JMZ78_RS08320	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JMZ78_RS08325	COG3659	wide pore channel activity
JMZ78_RS08340	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS08345	COG1538	Outer membrane efflux protein
JMZ78_RS08350	COG0586	Pfam SNARE associated Golgi protein
JMZ78_RS08360	COG1686	Belongs to the peptidase S11 family
JMZ78_RS08370	COG0277	FAD linked oxidase domain protein
JMZ78_RS08375	COG1472	Belongs to the glycosyl hydrolase 3 family
JMZ78_RS08380	COG1732	Glycine betaine
JMZ78_RS08385	COG1174	glycine betaine transport
JMZ78_RS08390	COG1125	glycine betaine transport
JMZ78_RS08395	COG1174	glycine betaine transport
JMZ78_RS08405	COG3275	phosphorelay sensor kinase activity
JMZ78_RS08415	COG4807	Protein conserved in bacteria
JMZ78_RS08435	COG5455	response to cobalt ion
JMZ78_RS08440	COG0583	DNA-binding transcription factor activity
JMZ78_RS08445	COG2252	PERMEase
JMZ78_RS08455	COG0583	DNA-binding transcription factor activity
JMZ78_RS08470	COG0351	phosphomethylpyrimidine kinase
JMZ78_RS08475	COG1830	Aldolase
JMZ78_RS08485	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JMZ78_RS08510	COG1070	Carbohydrate kinase
JMZ78_RS08520	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JMZ78_RS08525	COG4948	Mandelate Racemase Muconate Lactonizing
JMZ78_RS08530	COG0747	negative chemotaxis
JMZ78_RS08535	COG0601	transmembrane transport
JMZ78_RS08540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS08545	COG0444	Belongs to the ABC transporter superfamily
JMZ78_RS08550	COG4608	Belongs to the ABC transporter superfamily
JMZ78_RS08560	COG0826	peptidase U32
JMZ78_RS08565	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS08570	COG2205	protein histidine kinase activity
JMZ78_RS08595	COG1301	dicarboxylic acid transport
JMZ78_RS08615	COG5002	protein histidine kinase activity
JMZ78_RS08620	COG0443	Heat shock 70 kDa protein
JMZ78_RS08625	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JMZ78_RS08640	COG2982	Protein involved in outer membrane biogenesis
JMZ78_RS08645	COG1253	flavin adenine dinucleotide binding
JMZ78_RS08680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JMZ78_RS08700	COG1215	transferase activity, transferring glycosyl groups
JMZ78_RS08735	COG2244	polysaccharide biosynthetic process
JMZ78_RS08740	COG1442	glycosyl transferase family 8
JMZ78_RS08740	COG1216	Glycosyl transferase, family 2
JMZ78_RS08805	COG0438	transferase activity, transferring glycosyl groups
JMZ78_RS08810	COG1442	glycosyl transferase family 8
JMZ78_RS08810	COG1216	Glycosyl transferase, family 2
JMZ78_RS08820	COG0463	Glycosyl transferase, family 2
JMZ78_RS08845	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JMZ78_RS08875	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JMZ78_RS08880	COG0583	DNA-binding transcription factor activity
JMZ78_RS08890	COG0531	amino acid
JMZ78_RS08895	COG0640	Transcriptional regulator
JMZ78_RS08900	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JMZ78_RS08910	COG2925	Exonuclease
JMZ78_RS08920	COG3344	reverse transcriptase
JMZ78_RS08930	COG1289	transmembrane transporter activity
JMZ78_RS08950	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JMZ78_RS08960	COG1942	4-Oxalocrotonate Tautomerase
JMZ78_RS08965	COG0583	DNA-binding transcription factor activity
JMZ78_RS08970	COG0095	Lipoate-protein ligase
JMZ78_RS08975	COG0477	Major facilitator Superfamily
JMZ78_RS08985	COG3300	MHYT domain
JMZ78_RS08985	COG5001	Diguanylate cyclase
JMZ78_RS08995	COG3615	Tellurite resistance protein tehB
JMZ78_RS09020	COG3706	GGDEF domain
JMZ78_RS09060	COG2916	Histone family protein nucleoid-structuring protein H-NS
JMZ78_RS09165	COG0582	viral genome integration into host DNA
JMZ78_RS09175	COG0534	Mate efflux family protein
JMZ78_RS09185	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JMZ78_RS09205	COG0604	alcohol dehydrogenase
JMZ78_RS09210	COG1309	transcriptional regulator
JMZ78_RS09215	COG0025	NhaP-type Na H and K H
JMZ78_RS09275	COG4227	nucleotidyltransferase activity
JMZ78_RS09315	COG3504	Conjugal transfer protein
JMZ78_RS09390	COG4771	TonB-dependent receptor
JMZ78_RS09395	COG1021	2,3-dihydroxybenzoate-AMP ligase
JMZ78_RS09415	COG2226	methyltransferase
JMZ78_RS09415	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JMZ78_RS09415	COG3433	isochorismatase activity
JMZ78_RS09430	COG1132	(ABC) transporter
JMZ78_RS09435	COG2814	Major facilitator Superfamily
JMZ78_RS09440	COG1169	isochorismate synthase
JMZ78_RS09445	COG0582	viral genome integration into host DNA
JMZ78_RS09480	COG0251	oxidation-reduction process
JMZ78_RS09500	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JMZ78_RS09510	COG1418	mRNA catabolic process
JMZ78_RS09515	COG0270	DNA (cytosine-5-)-methyltransferase activity
JMZ78_RS09520	COG3727	T/G mismatch-specific endonuclease activity
JMZ78_RS09525	COG0697	spore germination
JMZ78_RS09530	COG2354	Protein conserved in bacteria
JMZ78_RS09560	COG0366	Alpha amylase catalytic
JMZ78_RS09565	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS09575	COG0765	amino acid transport
JMZ78_RS09580	COG1126	abc transporter atp-binding protein
JMZ78_RS09585	COG2197	response regulator
JMZ78_RS09595	COG2197	response regulator
JMZ78_RS09630	COG3012	SEC-C Motif Domain Protein
JMZ78_RS09630	COG3318	Belongs to the UPF0149 family
JMZ78_RS09635	COG0814	amino acid
JMZ78_RS09645	COG1528	Iron-storage protein
JMZ78_RS09660	COG0477	Major facilitator Superfamily
JMZ78_RS09670	COG2211	Major facilitator Superfamily
JMZ78_RS09680	COG1528	Iron-storage protein
JMZ78_RS09690	COG1879	ABC-type sugar transport system periplasmic component
JMZ78_RS09700	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS09725	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JMZ78_RS09735	COG3102	Protein conserved in bacteria
JMZ78_RS09755	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JMZ78_RS09760	COG1801	Protein of unknown function DUF72
JMZ78_RS09765	COG1335	isochorismatase
JMZ78_RS09775	COG0494	nUDIX hydrolase
JMZ78_RS09800	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JMZ78_RS09810	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JMZ78_RS09815	COG0739	heme binding
JMZ78_RS09820	COG1560	Kdo2-lipid A biosynthetic process
JMZ78_RS09830	COG1737	Transcriptional regulator
JMZ78_RS09840	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JMZ78_RS09845	COG0129	dihydroxy-acid dehydratase activity
JMZ78_RS09850	COG0800	Aldolase
JMZ78_RS09860	COG3141	response to X-ray
JMZ78_RS09865	COG2979	Protein of unknown function (DUF533)
JMZ78_RS09870	COG1770	oligopeptidase
JMZ78_RS09875	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JMZ78_RS09885	COG2372	response to copper ion
JMZ78_RS09890	COG1276	copper resistance
JMZ78_RS09905	COG2990	Protein conserved in bacteria
JMZ78_RS09930	COG3008	intermembrane lipid transfer
JMZ78_RS09935	COG2995	paraquat-inducible protein a
JMZ78_RS09940	COG1956	GAF domain-containing protein
JMZ78_RS09960	COG2814	Major facilitator Superfamily
JMZ78_RS09965	COG1414	Transcriptional regulator
JMZ78_RS09995	COG0768	penicillin binding
JMZ78_RS10000	COG2226	methyltransferase
JMZ78_RS10015	COG3716	PTS system mannose fructose sorbose family IID component
JMZ78_RS10020	COG3715	PTS system
JMZ78_RS10025	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS10025	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS10030	COG1253	flavin adenine dinucleotide binding
JMZ78_RS10035	COG2200	EAL domain
JMZ78_RS10040	COG1760	l-serine dehydratase
JMZ78_RS10060	COG0251	oxidation-reduction process
JMZ78_RS10065	COG1199	ATP-dependent helicase activity
JMZ78_RS10075	COG3065	identical protein binding
JMZ78_RS10085	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JMZ78_RS10095	COG2894	cell division
JMZ78_RS10110	COG0179	Fumarylacetoacetate (FAA) hydrolase
JMZ78_RS10140	COG2719	SpoVR family
JMZ78_RS10165	COG1619	proteins homologs of microcin C7 resistance protein MccF
JMZ78_RS10175	COG4774	siderophore transport
JMZ78_RS10185	COG2308	Evidence 4 Homologs of previously reported genes of
JMZ78_RS10225	COG0583	DNA-binding transcription factor activity
JMZ78_RS10230	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JMZ78_RS10245	COG1882	Formate acetyltransferase
JMZ78_RS10280	COG0583	DNA-binding transcription factor activity
JMZ78_RS10310	COG0583	DNA-binding transcription factor activity
JMZ78_RS10325	COG3122	Protein conserved in bacteria
JMZ78_RS10345	COG2885	chlorophyll binding
JMZ78_RS10425	COG1262	PFAM Formylglycine-generating sulfatase enzyme
JMZ78_RS10520	COG0012	GTP binding
JMZ78_RS10540	COG0659	secondary active sulfate transmembrane transporter activity
JMZ78_RS10570	COG2890	protein-(glutamine-N5) methyltransferase activity
JMZ78_RS10590	COG0387	Pfam Sodium calcium exchanger
JMZ78_RS10595	COG4572	Cation transport regulator
JMZ78_RS10600	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JMZ78_RS10610	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JMZ78_RS10615	COG3707	response regulator
JMZ78_RS10620	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JMZ78_RS10630	COG1116	anion transmembrane transporter activity
JMZ78_RS10635	COG2146	nitrite reductase [NAD(P)H] activity
JMZ78_RS10635	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JMZ78_RS10640	COG0243	molybdopterin cofactor binding
JMZ78_RS10645	COG4932	domain protein
JMZ78_RS10650	COG2197	response regulator
JMZ78_RS10655	COG3850	Histidine kinase
JMZ78_RS10660	COG2223	nitrite transmembrane transporter activity
JMZ78_RS10670	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JMZ78_RS10675	COG1140	nitrate reductase beta subunit
JMZ78_RS10680	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JMZ78_RS10685	COG2181	nitrate reductase activity
JMZ78_RS10695	COG1522	sequence-specific DNA binding
JMZ78_RS10730	COG0788	formyltetrahydrofolate deformylase activity
JMZ78_RS10740	COG1752	Esterase of the alpha-beta hydrolase superfamily
JMZ78_RS10745	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS10750	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JMZ78_RS10755	COG2916	Histone family protein nucleoid-structuring protein H-NS
JMZ78_RS10765	COG1435	thymidine kinase activity
JMZ78_RS10770	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS10770	COG1454	alcohol dehydrogenase
JMZ78_RS10780	COG2095	MarC family integral membrane protein
JMZ78_RS10785	COG4166	transmembrane transport
JMZ78_RS10790	COG0601	transmembrane transport
JMZ78_RS10795	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS10800	COG0444	Belongs to the ABC transporter superfamily
JMZ78_RS10810	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JMZ78_RS10830	COG2353	YceI-like domain
JMZ78_RS10840	COG2350	Protein conserved in bacteria
JMZ78_RS10850	COG3001	Fructosamine kinase
JMZ78_RS10860	COG1105	Belongs to the carbohydrate kinase PfkB family
JMZ78_RS10865	COG3137	Salt-induced outer membrane protein
JMZ78_RS10905	COG0072	phenylalanine-tRNA ligase activity
JMZ78_RS10905	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JMZ78_RS10925	COG0583	DNA-binding transcription factor activity
JMZ78_RS10945	COG0386	Belongs to the glutathione peroxidase family
JMZ78_RS10955	COG0791	NLP P60 protein
JMZ78_RS10965	COG4256	Hemin uptake protein
JMZ78_RS10970	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JMZ78_RS10985	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JMZ78_RS10985	COG0574	Belongs to the PEP-utilizing enzyme family
JMZ78_RS10995	COG0628	permease
JMZ78_RS11000	COG0277	FAD linked oxidase domain protein
JMZ78_RS11000	COG0247	lactate metabolic process
JMZ78_RS11005	COG2050	protein possibly involved in aromatic compounds catabolism
JMZ78_RS11010	COG2261	transglycosylase associated protein
JMZ78_RS11035	COG1120	ATPase activity
JMZ78_RS11040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS11050	COG0583	DNA-binding transcription factor activity
JMZ78_RS11075	COG1304	FMN binding
JMZ78_RS11080	COG1309	transcriptional regulator
JMZ78_RS11100	COG0316	Belongs to the HesB IscA family
JMZ78_RS11105	COG0719	Fe-S assembly protein
JMZ78_RS11110	COG0396	ATPase activity
JMZ78_RS11115	COG0719	Fe-S assembly protein
JMZ78_RS11130	COG1376	ErfK ybiS ycfS ynhG family protein
JMZ78_RS11160	COG1309	transcriptional regulator
JMZ78_RS11165	COG3185	4-Hydroxyphenylpyruvate dioxygenase
JMZ78_RS11165	COG1082	Xylose isomerase domain protein TIM barrel
JMZ78_RS11170	COG2271	Major facilitator Superfamily
JMZ78_RS11175	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JMZ78_RS11185	COG1120	ATPase activity
JMZ78_RS11190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS11195	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JMZ78_RS11200	COG1414	Transcriptional regulator
JMZ78_RS11235	COG2814	Major facilitator Superfamily
JMZ78_RS11255	COG0583	DNA-binding transcription factor activity
JMZ78_RS11260	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS11280	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JMZ78_RS11285	COG1116	anion transmembrane transporter activity
JMZ78_RS11290	COG4774	siderophore transport
JMZ78_RS11295	COG1120	ATPase activity
JMZ78_RS11300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS11305	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS11325	COG0765	amino acid transport
JMZ78_RS11330	COG1126	abc transporter atp-binding protein
JMZ78_RS11370	COG3383	formate dehydrogenase (NAD+) activity
JMZ78_RS11375	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
JMZ78_RS11385	COG1175	transmembrane transport
JMZ78_RS11415	COG4133	protoheme IX ABC transporter activity
JMZ78_RS11420	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JMZ78_RS11425	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JMZ78_RS11440	COG1138	Cytochrome C-type biogenesis protein
JMZ78_RS11445	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JMZ78_RS11450	COG4235	cytochrome complex assembly
JMZ78_RS11450	COG3088	subunit of a heme lyase
JMZ78_RS11470	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JMZ78_RS11485	COG5002	protein histidine kinase activity
JMZ78_RS11485	COG3850	Histidine kinase
JMZ78_RS11490	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS11505	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JMZ78_RS11535	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS11540	COG2610	gluconate transmembrane transporter activity
JMZ78_RS11545	COG1250	3-hydroxyacyl-CoA dehydrogenase
JMZ78_RS11555	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JMZ78_RS11565	COG0583	DNA-binding transcription factor activity
JMZ78_RS11590	COG0277	FAD linked oxidase domain protein
JMZ78_RS11595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JMZ78_RS11620	COG0402	S-adenosylhomocysteine deaminase activity
JMZ78_RS11675	COG4608	Belongs to the ABC transporter superfamily
JMZ78_RS11680	COG0444	Belongs to the ABC transporter superfamily
JMZ78_RS11705	COG0346	lactoylglutathione lyase activity
JMZ78_RS11710	COG1349	DNA-binding transcription factor activity
JMZ78_RS11745	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JMZ78_RS11800	COG0307	riboflavin synthase, alpha
JMZ78_RS11805	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JMZ78_RS11810	COG2814	Major facilitator Superfamily
JMZ78_RS11815	COG0583	DNA-binding transcription factor activity
JMZ78_RS11830	COG2814	Major facilitator Superfamily
JMZ78_RS11845	COG0791	NLP P60 protein
JMZ78_RS11850	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JMZ78_RS11860	COG0346	lactoylglutathione lyase activity
JMZ78_RS11865	COG1902	pentaerythritol trinitrate reductase activity
JMZ78_RS11870	COG1309	transcriptional regulator
JMZ78_RS11875	COG3313	Fe-S protein
JMZ78_RS11880	COG4989	oxidoreductase activity
JMZ78_RS11885	COG2032	superoxide dismutase activity
JMZ78_RS11890	COG1289	transmembrane transporter activity
JMZ78_RS11895	COG1566	PFAM secretion protein HlyD family protein
JMZ78_RS11910	COG3706	GGDEF domain
JMZ78_RS11925	COG3895	Periplasmic Protein
JMZ78_RS11940	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JMZ78_RS11945	COG0625	glutathione transferase activity
JMZ78_RS11955	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JMZ78_RS11965	COG4659	FMN binding
JMZ78_RS12000	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS12010	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS12020	COG2814	Major facilitator Superfamily
JMZ78_RS12040	COG3038	cytochrome b561
JMZ78_RS12060	COG0583	DNA-binding transcription factor activity
JMZ78_RS12065	COG3485	protocatechuate 3,4-dioxygenase
JMZ78_RS12070	COG3485	protocatechuate 3,4-dioxygenase
JMZ78_RS12075	COG5383	Protein conserved in bacteria
JMZ78_RS12080	COG2272	Belongs to the type-B carboxylesterase lipase family
JMZ78_RS12095	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JMZ78_RS12100	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JMZ78_RS12105	COG1275	C4-dicarboxylate transporter malic acid transport protein
JMZ78_RS12110	COG0500	methyltransferase
JMZ78_RS12125	COG2207	Transcriptional regulator
JMZ78_RS12125	COG3708	Transcriptional regulator
JMZ78_RS12130	COG3135	benzoate transporter
JMZ78_RS12135	COG1396	sequence-specific DNA binding
JMZ78_RS12145	COG0826	peptidase U32
JMZ78_RS12165	COG1294	oxidase, subunit
JMZ78_RS12170	COG1271	oxidase subunit
JMZ78_RS12175	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JMZ78_RS12180	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JMZ78_RS12185	COG3842	ATPase activity
JMZ78_RS12190	COG1176	ABC-type spermidine putrescine transport system, permease component I
JMZ78_RS12195	COG1177	transmembrane transport
JMZ78_RS12235	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS12240	COG0747	negative chemotaxis
JMZ78_RS12250	COG3238	Protein conserved in bacteria
JMZ78_RS12255	COG1247	-acetyltransferase
JMZ78_RS12265	COG2130	NADP-dependent
JMZ78_RS12280	COG3691	Protein conserved in bacteria
JMZ78_RS12285	COG1228	amidohydrolase
JMZ78_RS12290	COG4772	TonB-dependent receptor
JMZ78_RS12315	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JMZ78_RS12320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS12325	COG1473	amidohydrolase
JMZ78_RS12330	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS12335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS12345	COG0765	amino acid transport
JMZ78_RS12350	COG1126	abc transporter atp-binding protein
JMZ78_RS12360	COG0625	glutathione transferase activity
JMZ78_RS12375	COG2211	Major facilitator Superfamily
JMZ78_RS12390	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JMZ78_RS12395	COG3842	ATPase activity
JMZ78_RS12400	COG1840	ABC-type Fe3 transport system, periplasmic component
JMZ78_RS12405	COG1178	ABC-type Fe3 transport system permease component
JMZ78_RS12410	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JMZ78_RS12415	COG2181	nitrate reductase activity
JMZ78_RS12420	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JMZ78_RS12425	COG1140	nitrate reductase beta subunit
JMZ78_RS12430	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JMZ78_RS12450	COG1414	Transcriptional regulator
JMZ78_RS12455	COG4948	Mandelate Racemase Muconate Lactonizing
JMZ78_RS12460	COG4829	muconolactone delta-isomerase
JMZ78_RS12465	COG3485	protocatechuate 3,4-dioxygenase
JMZ78_RS12475	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
JMZ78_RS12500	COG0437	4 iron, 4 sulfur cluster binding
JMZ78_RS12505	COG2864	formate dehydrogenase
JMZ78_RS12520	COG2326	polyphosphate kinase activity
JMZ78_RS12530	COG2814	Major facilitator Superfamily
JMZ78_RS12540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS12550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS12560	COG0747	negative chemotaxis
JMZ78_RS12565	COG1064	alcohol dehydrogenase
JMZ78_RS12580	COG0488	(ABC) transporter
JMZ78_RS12620	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS12625	COG3729	General stress protein
JMZ78_RS12635	COG3685	Protein conserved in bacteria
JMZ78_RS12645	COG0366	Alpha amylase catalytic
JMZ78_RS12655	COG2323	membrane
JMZ78_RS12670	COG3111	PFAM Bacterial OB fold (BOF) protein
JMZ78_RS12680	COG1764	response to oxidative stress
JMZ78_RS12705	COG3781	membrane
JMZ78_RS12710	COG0243	molybdopterin cofactor binding
JMZ78_RS12715	COG0583	DNA-binding transcription factor activity
JMZ78_RS12720	COG2814	Major facilitator Superfamily
JMZ78_RS12725	COG1285	pathogenesis
JMZ78_RS12730	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JMZ78_RS12740	COG0583	DNA-binding transcription factor activity
JMZ78_RS12760	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JMZ78_RS12760	COG0519	Catalyzes the synthesis of GMP from XMP
JMZ78_RS12800	COG0596	Alpha beta hydrolase
JMZ78_RS12810	COG2205	protein histidine kinase activity
JMZ78_RS12825	COG0076	glutamate decarboxylase activity
JMZ78_RS12830	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JMZ78_RS12835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JMZ78_RS12840	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JMZ78_RS12845	COG1116	anion transmembrane transporter activity
JMZ78_RS12850	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JMZ78_RS12865	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS12880	COG3706	GGDEF domain
JMZ78_RS12885	COG0402	S-adenosylhomocysteine deaminase activity
JMZ78_RS12890	COG1953	Uracil, thiamine, allantoin
JMZ78_RS12925	COG0406	alpha-ribazole phosphatase activity
JMZ78_RS12940	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JMZ78_RS12955	COG2207	Transcriptional regulator
JMZ78_RS12970	COG0583	DNA-binding transcription factor activity
JMZ78_RS12985	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JMZ78_RS13010	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JMZ78_RS13055	COG0765	amino acid transport
JMZ78_RS13065	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JMZ78_RS13075	COG2070	2-Nitropropane dioxygenase
JMZ78_RS13080	COG0583	DNA-binding transcription factor activity
JMZ78_RS13090	COG1902	pentaerythritol trinitrate reductase activity
JMZ78_RS13095	COG4529	Protein conserved in bacteria
JMZ78_RS13100	COG0477	Major facilitator Superfamily
JMZ78_RS13130	COG2223	nitrite transmembrane transporter activity
JMZ78_RS13140	COG1609	Transcriptional regulator
JMZ78_RS13145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS13155	COG3037	sugar-specific permease SgaT UlaA
JMZ78_RS13160	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JMZ78_RS13175	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS13180	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS13180	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JMZ78_RS13180	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JMZ78_RS13195	COG0583	DNA-binding transcription factor activity
JMZ78_RS13200	COG0583	DNA-binding transcription factor activity
JMZ78_RS13205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JMZ78_RS13215	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JMZ78_RS13230	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS13240	COG1609	Transcriptional regulator
JMZ78_RS13270	COG1652	LysM domain
JMZ78_RS13295	COG0456	acetyltransferase
JMZ78_RS13295	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JMZ78_RS13305	COG0667	Aldo Keto reductase
JMZ78_RS13310	COG0667	Aldo Keto reductase
JMZ78_RS13315	COG3386	PFAM SMP-30 Gluconolaconase
JMZ78_RS13320	COG0667	Aldo Keto reductase
JMZ78_RS13345	COG4977	sequence-specific DNA binding
JMZ78_RS13365	COG4977	sequence-specific DNA binding
JMZ78_RS13370	COG1349	DNA-binding transcription factor activity
JMZ78_RS13385	COG1349	DNA-binding transcription factor activity
JMZ78_RS13390	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JMZ78_RS13395	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS13400	COG0738	Major facilitator superfamily
JMZ78_RS13445	COG1929	Belongs to the glycerate kinase type-1 family
JMZ78_RS13450	COG3835	regulator
JMZ78_RS13470	COG2186	Transcriptional regulator
JMZ78_RS13475	COG1263	PTS System
JMZ78_RS13475	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS13485	COG2814	Major facilitator Superfamily
JMZ78_RS13490	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS13490	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS13505	COG2819	hydrolase of the alpha beta superfamily
JMZ78_RS13510	COG5001	Diguanylate cyclase
JMZ78_RS13510	COG3300	MHYT domain
JMZ78_RS13545	COG3188	usher protein
JMZ78_RS13555	COG1649	PFAM Uncharacterised BCR, COG1649
JMZ78_RS13560	COG3550	peptidyl-serine autophosphorylation
JMZ78_RS13565	COG1396	sequence-specific DNA binding
JMZ78_RS13570	COG2351	hydroxyisourate hydrolase activity
JMZ78_RS13575	COG3648	Uricase
JMZ78_RS13575	COG3195	allantoin biosynthetic process
JMZ78_RS13580	COG2233	PERMEase
JMZ78_RS13610	COG2207	Transcriptional regulator
JMZ78_RS13625	COG4628	conserved protein (DUF2132)
JMZ78_RS13645	COG2011	ABC-type metal ion transport system permease component
JMZ78_RS13650	COG2070	2-Nitropropane dioxygenase
JMZ78_RS13660	COG0477	Major facilitator Superfamily
JMZ78_RS13730	COG2199	diguanylate cyclase activity
JMZ78_RS13745	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS13750	COG0583	DNA-binding transcription factor activity
JMZ78_RS13760	COG0039	L-malate dehydrogenase activity
JMZ78_RS13765	COG1349	DNA-binding transcription factor activity
JMZ78_RS13770	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JMZ78_RS13775	COG3395	kinase activity
JMZ78_RS13785	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JMZ78_RS13800	COG2731	YhcH YjgK YiaL family protein
JMZ78_RS13805	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS13835	COG4977	sequence-specific DNA binding
JMZ78_RS13845	COG0697	spore germination
JMZ78_RS13850	COG2814	Major facilitator Superfamily
JMZ78_RS13860	COG0410	ABC transporter
JMZ78_RS13865	COG1129	ABC transporter
JMZ78_RS13880	COG0683	leucine binding
JMZ78_RS13885	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JMZ78_RS13920	COG2223	nitrite transmembrane transporter activity
JMZ78_RS13925	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JMZ78_RS13940	COG1349	DNA-binding transcription factor activity
JMZ78_RS13945	COG2084	Dehydrogenase
JMZ78_RS13950	COG3395	kinase activity
JMZ78_RS13955	COG0235	Class ii aldolase
JMZ78_RS13960	COG3622	Belongs to the hyi family
JMZ78_RS13980	COG2200	EAL domain
JMZ78_RS13985	COG1546	Belongs to the CinA family
JMZ78_RS13990	COG0071	Belongs to the small heat shock protein (HSP20) family
JMZ78_RS14005	COG2197	response regulator
JMZ78_RS14020	COG2135	peptidase activity
JMZ78_RS14025	COG2207	Transcriptional regulator
JMZ78_RS14040	COG4221	oxidoreductase activity
JMZ78_RS14045	COG1802	Transcriptional regulator
JMZ78_RS14050	COG0589	response to stress
JMZ78_RS14055	COG0246	Mannitol dehydrogenase
JMZ78_RS14060	COG2271	Major facilitator Superfamily
JMZ78_RS14075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JMZ78_RS14090	COG0243	molybdopterin cofactor binding
JMZ78_RS14095	COG0437	4 iron, 4 sulfur cluster binding
JMZ78_RS14100	COG3302	dmso reductase anchor subunit
JMZ78_RS14115	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JMZ78_RS14120	COG1940	carbohydrate kinase activity
JMZ78_RS14125	COG0583	DNA-binding transcription factor activity
JMZ78_RS14130	COG2814	Major facilitator Superfamily
JMZ78_RS14135	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JMZ78_RS14145	COG3591	Belongs to the peptidase S1B family
JMZ78_RS14165	COG0628	permease
JMZ78_RS14195	COG0679	Auxin Efflux Carrier
JMZ78_RS14205	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JMZ78_RS14230	COG3290	protein histidine kinase activity
JMZ78_RS14235	COG4565	transcriptional regulatory protein
JMZ78_RS14255	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JMZ78_RS14255	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JMZ78_RS14265	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JMZ78_RS14270	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JMZ78_RS14280	COG0183	Belongs to the thiolase family
JMZ78_RS14285	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JMZ78_RS14295	COG1414	Transcriptional regulator
JMZ78_RS14300	COG2840	Smr protein MutS2
JMZ78_RS14305	COG0583	DNA-binding transcription factor activity
JMZ78_RS14320	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JMZ78_RS14335	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JMZ78_RS14350	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JMZ78_RS14355	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JMZ78_RS14370	COG0531	amino acid
JMZ78_RS14380	COG3136	membrane protein required for alginate biosynthesis
JMZ78_RS14385	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS14395	COG2205	protein histidine kinase activity
JMZ78_RS14405	COG0114	fumarate hydratase activity
JMZ78_RS14410	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JMZ78_RS14410	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JMZ78_RS14415	COG1482	cell wall glycoprotein biosynthetic process
JMZ78_RS14420	COG5339	Protein conserved in bacteria
JMZ78_RS14425	COG1609	Transcriptional regulator
JMZ78_RS14430	COG1263	PTS System
JMZ78_RS14430	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS14435	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JMZ78_RS14460	COG2391	methyltransferase activity
JMZ78_RS14465	COG0425	Belongs to the sulfur carrier protein TusA family
JMZ78_RS14470	COG5562	phage envelope protein
JMZ78_RS14475	COG0401	homolog of Blt101
JMZ78_RS14480	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JMZ78_RS14485	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS14495	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JMZ78_RS14500	COG0477	Major facilitator Superfamily
JMZ78_RS14505	COG1113	amino acid transport
JMZ78_RS14510	COG2988	succinylglutamate desuccinylase activity
JMZ78_RS14515	COG3724	N-succinylarginine dihydrolase activity
JMZ78_RS14520	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS14525	COG3138	arginine N-succinyltransferase
JMZ78_RS14530	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JMZ78_RS14540	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JMZ78_RS14545	COG0667	Aldo Keto reductase
JMZ78_RS14550	COG0583	DNA-binding transcription factor activity
JMZ78_RS14575	COG4122	O-methyltransferase activity
JMZ78_RS14580	COG1643	Atp-dependent helicase
JMZ78_RS14595	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JMZ78_RS14600	COG3327	negative regulation of DNA-templated transcription, initiation
JMZ78_RS14605	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JMZ78_RS14610	COG0183	Belongs to the thiolase family
JMZ78_RS14615	COG2050	protein possibly involved in aromatic compounds catabolism
JMZ78_RS14620	COG1250	3-hydroxyacyl-CoA dehydrogenase
JMZ78_RS14625	COG1024	Enoyl-CoA hydratase
JMZ78_RS14630	COG1024	Enoyl-CoA hydratase
JMZ78_RS14635	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JMZ78_RS14640	COG2151	metal-sulfur cluster biosynthetic enzyme
JMZ78_RS14645	COG3396	Phenylacetate-CoA oxygenase
JMZ78_RS14650	COG3460	Phenylacetate-CoA oxygenase
JMZ78_RS14655	COG3396	Phenylacetate-CoA oxygenase
JMZ78_RS14660	COG2030	dehydratase
JMZ78_RS14660	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS14680	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS14685	COG2207	Transcriptional regulator
JMZ78_RS14690	COG3784	Protein of unknown function (DUF1318)
JMZ78_RS14700	COG2911	Protein conserved in bacteria
JMZ78_RS14705	COG0586	Pfam SNARE associated Golgi protein
JMZ78_RS14710	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JMZ78_RS14715	COG3187	Heat shock protein
JMZ78_RS14720	COG3042	response to heat
JMZ78_RS14725	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JMZ78_RS14725	COG1013	pyruvate-flavodoxin oxidoreductase activity
JMZ78_RS14725	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JMZ78_RS14725	COG0674	pyruvate-flavodoxin oxidoreductase activity
JMZ78_RS14730	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JMZ78_RS14740	COG0589	response to stress
JMZ78_RS14750	COG0513	Belongs to the DEAD box helicase family
JMZ78_RS14760	COG1349	DNA-binding transcription factor activity
JMZ78_RS14765	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS14780	COG1113	amino acid transport
JMZ78_RS14785	COG1522	sequence-specific DNA binding
JMZ78_RS14795	COG1448	Aminotransferase
JMZ78_RS14800	COG2011	ABC-type metal ion transport system permease component
JMZ78_RS14815	COG0436	Aminotransferase
JMZ78_RS14820	COG0604	alcohol dehydrogenase
JMZ78_RS14850	COG0583	DNA-binding transcription factor activity
JMZ78_RS14870	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS14875	COG1309	transcriptional regulator
JMZ78_RS14880	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS14960	COG2885	chlorophyll binding
JMZ78_RS15075	COG1196	nuclear chromosome segregation
JMZ78_RS15075	COG0739	heme binding
JMZ78_RS15075	COG0741	lytic transglycosylase activity
JMZ78_RS15155	COG3567	Phage-associated protein, HI1409 family
JMZ78_RS15160	COG1783	phage Terminase large subunit
JMZ78_RS15180	COG3772	lysozyme
JMZ78_RS15190	COG0484	heat shock protein binding
JMZ78_RS15295	COG0582	viral genome integration into host DNA
JMZ78_RS15300	COG0693	protein deglycase activity
JMZ78_RS15305	COG1078	dGTPase activity
JMZ78_RS15310	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS15315	COG0583	DNA-binding transcription factor activity
JMZ78_RS15330	COG0656	L-ascorbic acid biosynthetic process
JMZ78_RS15360	COG4166	transmembrane transport
JMZ78_RS15370	COG2866	Carboxypeptidase
JMZ78_RS15375	COG4948	Mandelate Racemase Muconate Lactonizing
JMZ78_RS15380	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JMZ78_RS15385	COG3180	Ammonia monooxygenase
JMZ78_RS15395	COG1486	melibiose metabolic process
JMZ78_RS15400	COG0583	DNA-binding transcription factor activity
JMZ78_RS15410	COG3106	COG3106 Predicted ATPase
JMZ78_RS15420	COG1983	PspC domain protein
JMZ78_RS15430	COG1842	Phage shock protein A
JMZ78_RS15435	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JMZ78_RS15445	COG1473	amidohydrolase
JMZ78_RS15460	COG0702	epimerase
JMZ78_RS15475	COG2135	peptidase activity
JMZ78_RS15485	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JMZ78_RS15490	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JMZ78_RS15495	COG3344	reverse transcriptase
JMZ78_RS15610	COG1196	nuclear chromosome segregation
JMZ78_RS15705	COG3728	DNA packaging
JMZ78_RS15705	COG5484	DNA packaging
JMZ78_RS15755	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JMZ78_RS15870	COG4171	peptide transport system, permease
JMZ78_RS15885	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JMZ78_RS15895	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JMZ78_RS15900	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JMZ78_RS15900	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JMZ78_RS15915	COG1349	DNA-binding transcription factor activity
JMZ78_RS15925	COG0023	Translation Initiation Factor
JMZ78_RS15935	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JMZ78_RS15940	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
JMZ78_RS15945	COG0671	phosphoesterase, PA-phosphatase related
JMZ78_RS15955	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JMZ78_RS15980	COG0616	signal peptide processing
JMZ78_RS15990	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS15995	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JMZ78_RS16005	COG0583	DNA-binding transcription factor activity
JMZ78_RS16015	COG0009	L-threonylcarbamoyladenylate synthase
JMZ78_RS16025	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JMZ78_RS16030	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JMZ78_RS16030	COG0512	Glutamine amidotransferase of anthranilate synthase
JMZ78_RS16035	COG0135	phosphoribosylanthranilate isomerase activity
JMZ78_RS16035	COG0134	indole-3-glycerol-phosphate synthase activity
JMZ78_RS16090	COG4774	siderophore transport
JMZ78_RS16100	COG3047	cAMP biosynthetic process
JMZ78_RS16105	COG0727	PFAM Uncharacterised protein family (UPF0153)
JMZ78_RS16135	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JMZ78_RS16140	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS16145	COG1988	membrane-bound metal-dependent
JMZ78_RS16150	COG1823	symporter activity
JMZ78_RS16160	COG0753	catalase activity
JMZ78_RS16170	COG1486	melibiose metabolic process
JMZ78_RS16175	COG1917	Cupin 2, conserved barrel domain protein
JMZ78_RS16175	COG2169	Transcriptional regulator
JMZ78_RS16180	COG1447	Phosphotransferase system cellobiose-specific component IIA
JMZ78_RS16185	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS16195	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS16200	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JMZ78_RS16210	COG0322	excinuclease ABC activity
JMZ78_RS16215	COG3678	ATP-independent chaperone mediated protein folding
JMZ78_RS16225	COG3724	N-succinylarginine dihydrolase activity
JMZ78_RS16235	COG3138	arginine N-succinyltransferase
JMZ78_RS16245	COG0708	Exodeoxyribonuclease III
JMZ78_RS16250	COG0398	Pfam SNARE associated Golgi protein
JMZ78_RS16255	COG0398	Pfam SNARE associated Golgi protein
JMZ78_RS16260	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JMZ78_RS16265	COG4134	Bacterial extracellular solute-binding protein
JMZ78_RS16270	COG4135	transport system, permease component
JMZ78_RS16275	COG4136	ATPase activity
JMZ78_RS16280	COG2897	thiosulfate sulfurtransferase activity
JMZ78_RS16285	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JMZ78_RS16290	COG0494	nUDIX hydrolase
JMZ78_RS16295	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JMZ78_RS16300	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS16300	COG0604	alcohol dehydrogenase
JMZ78_RS16300	COG3321	synthase
JMZ78_RS16305	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JMZ78_RS16310	COG0709	Synthesizes selenophosphate from selenide and ATP
JMZ78_RS16325	COG0778	Nitroreductase
JMZ78_RS16330	COG0616	signal peptide processing
JMZ78_RS16335	COG0252	asparaginase activity
JMZ78_RS16340	COG1335	isochorismatase
JMZ78_RS16345	COG2814	Major facilitator Superfamily
JMZ78_RS16350	COG1349	DNA-binding transcription factor activity
JMZ78_RS16355	COG0667	Aldo Keto reductase
JMZ78_RS16360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS16365	COG0191	fructose-bisphosphate aldolase activity
JMZ78_RS16370	COG1063	alcohol dehydrogenase
JMZ78_RS16375	COG2271	Major facilitator Superfamily
JMZ78_RS16380	COG1063	alcohol dehydrogenase
JMZ78_RS16395	COG3139	Protein of unknown function (DUF1315)
JMZ78_RS16415	COG0656	L-ascorbic acid biosynthetic process
JMZ78_RS16420	COG3713	MltA-interacting MipA family protein
JMZ78_RS16425	COG2766	serine protein kinase
JMZ78_RS16440	COG0386	Belongs to the glutathione peroxidase family
JMZ78_RS16465	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS16470	COG0583	DNA-binding transcription factor activity
JMZ78_RS16475	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JMZ78_RS16480	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JMZ78_RS16485	COG3344	reverse transcriptase
JMZ78_RS16495	COG0859	PFAM glycosyl transferase family 9
JMZ78_RS16500	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JMZ78_RS16510	COG2207	Transcriptional regulator
JMZ78_RS16515	COG2807	transmembrane transport
JMZ78_RS16520	COG0504	CTP synthase activity
JMZ78_RS16525	COG1683	Conserved Protein
JMZ78_RS16530	COG3189	MarR family transcriptional regulator
JMZ78_RS16535	COG3042	response to heat
JMZ78_RS16540	COG2199	diguanylate cyclase activity
JMZ78_RS16540	COG2203	Gaf domain
JMZ78_RS16560	COG3182	Iron-regulated membrane protein
JMZ78_RS16570	COG1560	Kdo2-lipid A biosynthetic process
JMZ78_RS16580	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JMZ78_RS16585	COG3706	GGDEF domain
JMZ78_RS16590	COG0583	DNA-binding transcription factor activity
JMZ78_RS16595	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JMZ78_RS16625	COG1294	oxidase, subunit
JMZ78_RS16630	COG1271	oxidase subunit
JMZ78_RS16635	COG3546	catalase activity
JMZ78_RS16640	COG3685	Protein conserved in bacteria
JMZ78_RS16645	COG3685	Protein conserved in bacteria
JMZ78_RS16650	COG3729	General stress protein
JMZ78_RS16655	COG1063	alcohol dehydrogenase
JMZ78_RS16660	COG3813	Protein conserved in bacteria
JMZ78_RS16680	COG0640	Transcriptional regulator
JMZ78_RS16685	COG0538	isocitrate dehydrogenase activity
JMZ78_RS16690	COG1187	pseudouridine synthase activity
JMZ78_RS16710	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JMZ78_RS16730	COG2205	protein histidine kinase activity
JMZ78_RS16735	COG2850	peptidyl-arginine hydroxylation
JMZ78_RS16755	COG1177	transmembrane transport
JMZ78_RS16770	COG0318	PFAM AMP-dependent synthetase and ligase
JMZ78_RS16780	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JMZ78_RS16790	COG4591	ABC-type transport system involved in lipoprotein release permease component
JMZ78_RS16800	COG4591	ABC-type transport system involved in lipoprotein release permease component
JMZ78_RS16810	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JMZ78_RS16815	COG1376	ErfK ybiS ycfS ynhG family protein
JMZ78_RS16815	COG1388	LysM domain
JMZ78_RS16830	COG1309	transcriptional regulator
JMZ78_RS16845	COG3134	Outer membrane lipoprotein
JMZ78_RS16850	COG1252	NADH dehydrogenase
JMZ78_RS16875	COG5633	Lipoprotein
JMZ78_RS16880	COG0537	adenosine 5'-monophosphoramidase activity
JMZ78_RS16890	COG0084	hydrolase, TatD family'
JMZ78_RS16895	COG0470	DNA polymerase III
JMZ78_RS16905	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JMZ78_RS16910	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JMZ78_RS16915	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JMZ78_RS16930	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JMZ78_RS16950	COG1399	metal-binding, possibly nucleic acid-binding protein
JMZ78_RS16970	COG1530	ribonuclease E activity
JMZ78_RS16975	COG0583	DNA-binding transcription factor activity
JMZ78_RS16980	COG2814	Major facilitator Superfamily
JMZ78_RS17000	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JMZ78_RS17045	COG1560	Kdo2-lipid A biosynthetic process
JMZ78_RS17060	COG5645	(Lipo)protein
JMZ78_RS17095	COG3381	protein complex oligomerization
JMZ78_RS17120	COG0583	DNA-binding transcription factor activity
JMZ78_RS17130	COG1335	isochorismatase
JMZ78_RS17140	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JMZ78_RS17145	COG1702	phosphate starvation-inducible protein PhoH
JMZ78_RS17165	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JMZ78_RS17175	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JMZ78_RS17190	COG1309	transcriptional regulator
JMZ78_RS17225	COG2233	PERMEase
JMZ78_RS17235	COG3729	General stress protein
JMZ78_RS17265	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS17280	COG0531	amino acid
JMZ78_RS17285	COG0174	glutamine synthetase
JMZ78_RS17290	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JMZ78_RS17295	COG1917	Cupin 2, conserved barrel domain protein
JMZ78_RS17295	COG1396	sequence-specific DNA binding
JMZ78_RS17300	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS17305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JMZ78_RS17310	COG0583	DNA-binding transcription factor activity
JMZ78_RS17315	COG0473	3-isopropylmalate dehydrogenase activity
JMZ78_RS17320	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JMZ78_RS17325	COG4638	Rieske (2fe-2S)
JMZ78_RS17330	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS17335	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JMZ78_RS17385	COG3772	lysozyme
JMZ78_RS17410	COG0741	lytic transglycosylase activity
JMZ78_RS17560	COG0305	Participates in initiation and elongation during chromosome replication
JMZ78_RS17635	COG0670	Belongs to the BI1 family
JMZ78_RS17650	COG2207	Transcriptional regulator
JMZ78_RS17655	COG1881	PFAM PEBP family protein
JMZ78_RS17670	COG1832	CoA-binding protein
JMZ78_RS17680	COG0210	DNA helicase
JMZ78_RS17685	COG3304	Inner membrane component domain
JMZ78_RS17690	COG1289	transmembrane transporter activity
JMZ78_RS17695	COG3070	regulator of competence-specific genes
JMZ78_RS17715	COG1067	ATP-dependent peptidase activity
JMZ78_RS17725	COG3130	regulation of translation
JMZ78_RS17730	COG3009	Protein conserved in bacteria
JMZ78_RS17735	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JMZ78_RS17735	COG3008	intermembrane lipid transfer
JMZ78_RS17740	COG2995	paraquat-inducible protein a
JMZ78_RS17745	COG0488	(ABC) transporter
JMZ78_RS17755	COG3217	Mosc domain protein beta barrel domain protein
JMZ78_RS17755	COG0633	Ferredoxin
JMZ78_RS17770	COG0431	NADPH-dependent FMN reductase
JMZ78_RS17775	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JMZ78_RS17780	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JMZ78_RS17785	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JMZ78_RS17795	COG0308	aminopeptidase N
JMZ78_RS17805	COG1473	amidohydrolase
JMZ78_RS17815	COG0814	amino acid
JMZ78_RS17840	COG1448	Aminotransferase
JMZ78_RS17845	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JMZ78_RS17850	COG3108	Peptidase M15
JMZ78_RS17855	COG2989	Protein conserved in bacteria
JMZ78_RS17865	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
JMZ78_RS17875	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JMZ78_RS17880	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JMZ78_RS17885	COG3173	Aminoglycoside phosphotransferase
JMZ78_RS17900	COG3214	Protein conserved in bacteria
JMZ78_RS17915	COG0658	competence protein
JMZ78_RS17915	COG2333	competence protein COMEC
JMZ78_RS17925	COG0539	negative regulation of cytoplasmic translation
JMZ78_RS17945	COG2323	membrane
JMZ78_RS17950	COG1944	ATP diphosphatase activity
JMZ78_RS17955	COG2116	formate transmembrane transporter activity
JMZ78_RS17960	COG1882	Formate acetyltransferase
JMZ78_RS17965	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JMZ78_RS17970	COG0477	Major facilitator Superfamily
JMZ78_RS17975	COG3302	dmso reductase anchor subunit
JMZ78_RS17980	COG0437	4 iron, 4 sulfur cluster binding
JMZ78_RS17985	COG0243	molybdopterin cofactor binding
JMZ78_RS17995	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JMZ78_RS18005	COG1178	ABC-type Fe3 transport system permease component
JMZ78_RS18005	COG1674	ftsk spoiiie
JMZ78_RS18015	COG0492	ferredoxin-NADP+ reductase activity
JMZ78_RS18020	COG4988	ABC transporter
JMZ78_RS18025	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JMZ78_RS18040	COG0542	response to heat
JMZ78_RS18050	COG1278	Cold shock
JMZ78_RS18060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS18065	COG3593	DNA synthesis involved in DNA repair
JMZ78_RS18075	COG2431	L-lysine efflux transmembrane transporter activity
JMZ78_RS18085	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JMZ78_RS18095	COG0028	Belongs to the TPP enzyme family
JMZ78_RS18100	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
JMZ78_RS18105	COG0702	epimerase
JMZ78_RS18110	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JMZ78_RS18115	COG3023	N-Acetylmuramoyl-L-alanine amidase
JMZ78_RS18120	COG5001	Diguanylate cyclase
JMZ78_RS18120	COG4251	negative regulation of phosphorylation
JMZ78_RS18120	COG3706	GGDEF domain
JMZ78_RS18120	COG2203	Gaf domain
JMZ78_RS18130	COG1126	abc transporter atp-binding protein
JMZ78_RS18135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS18140	COG4215	(ABC) transporter
JMZ78_RS18145	COG4160	amino acid transport
JMZ78_RS18150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS18155	COG5002	protein histidine kinase activity
JMZ78_RS18160	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS18175	COG1177	transmembrane transport
JMZ78_RS18180	COG1176	ABC-type spermidine putrescine transport system, permease component I
JMZ78_RS18185	COG3842	ATPase activity
JMZ78_RS18190	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JMZ78_RS18390	COG4695	Portal protein
JMZ78_RS18425	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JMZ78_RS18465	COG3344	reverse transcriptase
JMZ78_RS18470	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JMZ78_RS18475	COG3226	Transcriptional regulator
JMZ78_RS18480	COG0738	Major facilitator superfamily
JMZ78_RS18485	COG0561	phosphatase activity
JMZ78_RS18490	COG2814	Major facilitator Superfamily
JMZ78_RS18495	COG0671	phosphoesterase, PA-phosphatase related
JMZ78_RS18500	COG1349	DNA-binding transcription factor activity
JMZ78_RS18505	COG1686	Belongs to the peptidase S11 family
JMZ78_RS18515	COG0625	glutathione transferase activity
JMZ78_RS18520	COG2133	pyrroloquinoline quinone binding
JMZ78_RS18530	COG2223	nitrite transmembrane transporter activity
JMZ78_RS18550	COG0747	negative chemotaxis
JMZ78_RS18565	COG0303	'Molybdopterin
JMZ78_RS18570	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JMZ78_RS18575	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JMZ78_RS18580	COG1882	Formate acetyltransferase
JMZ78_RS18585	COG0561	phosphatase activity
JMZ78_RS18595	COG1609	Transcriptional regulator
JMZ78_RS18600	COG2271	Major facilitator Superfamily
JMZ78_RS18610	COG0488	(ABC) transporter
JMZ78_RS18615	COG2365	Tyrosine phosphatase family
JMZ78_RS18620	COG1376	ErfK ybiS ycfS ynhG family protein
JMZ78_RS18625	COG2188	Transcriptional regulator
JMZ78_RS18630	COG2723	6-phospho-beta-galactosidase activity
JMZ78_RS18635	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JMZ78_RS18640	COG1321	iron dependent repressor
JMZ78_RS18650	COG2194	sulfuric ester hydrolase activity
JMZ78_RS18655	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JMZ78_RS18670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS18675	COG0765	amino acid transport
JMZ78_RS18680	COG1126	abc transporter atp-binding protein
JMZ78_RS18685	COG0668	transmembrane transport
JMZ78_RS18695	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JMZ78_RS18705	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JMZ78_RS18715	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JMZ78_RS18720	COG1199	ATP-dependent helicase activity
JMZ78_RS18725	COG0513	Belongs to the DEAD box helicase family
JMZ78_RS18730	COG3958	Transketolase
JMZ78_RS18735	COG3959	Transketolase, thiamine diphosphate binding domain
JMZ78_RS18740	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS18745	COG2271	Major facilitator Superfamily
JMZ78_RS18755	COG0583	DNA-binding transcription factor activity
JMZ78_RS18760	COG1309	transcriptional regulator
JMZ78_RS18765	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS18770	COG1131	(ABC) transporter
JMZ78_RS18775	COG0842	Transport permease protein
JMZ78_RS18780	COG0842	Transport permease protein
JMZ78_RS18790	COG3568	Endonuclease Exonuclease Phosphatase
JMZ78_RS18795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JMZ78_RS18800	COG0392	lysyltransferase activity
JMZ78_RS18805	COG0670	Belongs to the BI1 family
JMZ78_RS18810	COG0314	molybdopterin synthase activity
JMZ78_RS18815	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JMZ78_RS18825	COG0521	Mo-molybdopterin cofactor biosynthetic process
JMZ78_RS18845	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS18850	COG0642	Histidine kinase
JMZ78_RS18875	COG2226	methyltransferase
JMZ78_RS18890	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JMZ78_RS18895	COG1881	PFAM PEBP family protein
JMZ78_RS18935	COG4677	pectinesterase activity
JMZ78_RS18970	COG0789	Transcriptional regulator
JMZ78_RS18975	COG2200	EAL domain
JMZ78_RS19000	COG0561	phosphatase activity
JMZ78_RS19005	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JMZ78_RS19010	COG4149	molybdate abc transporter
JMZ78_RS19015	COG0725	ABC transporter, periplasmic molybdate-binding protein
JMZ78_RS19025	COG2005	Transcriptional regulator
JMZ78_RS19025	COG3585	molybdate ion transport
JMZ78_RS19030	COG1119	ATPase activity
JMZ78_RS19040	COG1085	galactose-1-phosphate uridylyltransferase
JMZ78_RS19050	COG2017	converts alpha-aldose to the beta-anomer
JMZ78_RS19060	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JMZ78_RS19075	COG3201	nicotinamide mononucleotide transporter
JMZ78_RS19080	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JMZ78_RS19125	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JMZ78_RS19130	COG2885	chlorophyll binding
JMZ78_RS19140	COG3064	Membrane
JMZ78_RS19145	COG0848	biopolymer transport protein
JMZ78_RS19150	COG0811	peptide transport
JMZ78_RS19155	COG0824	Thioesterase
JMZ78_RS19160	COG3790	cyd operon protein YbgE
JMZ78_RS19165	COG4890	Cyd operon protein YbgT
JMZ78_RS19170	COG1294	oxidase, subunit
JMZ78_RS19175	COG1271	oxidase subunit
JMZ78_RS19180	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JMZ78_RS19190	COG0508	dehydrogenase complex catalyzes the overall conversion of
JMZ78_RS19195	COG0567	Dehydrogenase, E1 component
JMZ78_RS19200	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JMZ78_RS19205	COG1053	succinate dehydrogenase
JMZ78_RS19210	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JMZ78_RS19215	COG2009	succinate dehydrogenase
JMZ78_RS19250	COG1984	allophanate hydrolase subunit 2
JMZ78_RS19255	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JMZ78_RS19270	COG0415	Belongs to the DNA photolyase family
JMZ78_RS19300	COG2205	protein histidine kinase activity
JMZ78_RS19305	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS19315	COG0033	Phosphoglucomutase
JMZ78_RS19325	COG0596	Alpha beta hydrolase
JMZ78_RS19340	COG0735	belongs to the Fur family
JMZ78_RS19380	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JMZ78_RS19385	COG1940	carbohydrate kinase activity
JMZ78_RS19385	COG1846	Transcriptional regulator
JMZ78_RS19390	COG0647	UMP catabolic process
JMZ78_RS19395	COG0367	asparagine synthase
JMZ78_RS19435	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JMZ78_RS19445	COG1702	phosphate starvation-inducible protein PhoH
JMZ78_RS19455	COG4535	Mg2 and Co2 transporter CorC
JMZ78_RS19470	COG0765	amino acid transport
JMZ78_RS19475	COG0765	amino acid transport
JMZ78_RS19480	COG1126	abc transporter atp-binding protein
JMZ78_RS19495	COG2888	peptidyl-tyrosine sulfation
JMZ78_RS19510	COG1466	dna polymerase III delta subunit
JMZ78_RS19525	COG0799	negative regulation of ribosome biogenesis
JMZ78_RS19535	COG0768	penicillin binding
JMZ78_RS19540	COG0772	Belongs to the SEDS family
JMZ78_RS19545	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JMZ78_RS19550	COG1686	Belongs to the peptidase S11 family
JMZ78_RS19565	COG0583	DNA-binding transcription factor activity
JMZ78_RS19580	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JMZ78_RS19600	COG3069	C4-dicarboxylate transmembrane transporter activity
JMZ78_RS19605	COG3719	Belongs to the RNase T2 family
JMZ78_RS19610	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JMZ78_RS19630	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JMZ78_RS19635	COG0583	DNA-binding transcription factor activity
JMZ78_RS19640	COG3969	phosphoadenosine phosphosulfate
JMZ78_RS19645	COG1475	DNA binding
JMZ78_RS19650	COG0436	Aminotransferase
JMZ78_RS19675	COG1129	ABC transporter
JMZ78_RS19680	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS19685	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS19695	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JMZ78_RS19710	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JMZ78_RS19720	COG0402	S-adenosylhomocysteine deaminase activity
JMZ78_RS19730	COG0483	inositol monophosphate 1-phosphatase activity
JMZ78_RS19735	COG2271	Major facilitator Superfamily
JMZ78_RS19765	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS19770	COG1129	ABC transporter
JMZ78_RS19775	COG0371	Dehydrogenase
JMZ78_RS19780	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS19795	COG2879	small protein
JMZ78_RS19800	COG1966	Carbon starvation protein
JMZ78_RS19810	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS19815	COG1535	isochorismatase
JMZ78_RS19815	COG3433	isochorismatase activity
JMZ78_RS19820	COG1021	2,3-dihydroxybenzoate-AMP ligase
JMZ78_RS19825	COG1169	isochorismate synthase
JMZ78_RS19830	COG4592	Periplasmic binding protein
JMZ78_RS19840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS19845	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS19850	COG1120	ATPase activity
JMZ78_RS19855	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JMZ78_RS19855	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JMZ78_RS19860	COG3251	PFAM MbtH domain protein
JMZ78_RS19865	COG2382	esterase
JMZ78_RS19870	COG4771	TonB-dependent receptor
JMZ78_RS19875	COG2977	Belongs to the P-Pant transferase superfamily
JMZ78_RS19880	COG3958	Transketolase
JMZ78_RS19885	COG3959	Transketolase, thiamine diphosphate binding domain
JMZ78_RS19890	COG2390	Transcriptional regulator
JMZ78_RS19895	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JMZ78_RS19900	COG1879	ABC-type sugar transport system periplasmic component
JMZ78_RS19910	COG1129	ABC transporter
JMZ78_RS19915	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS19925	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS19935	COG0583	DNA-binding transcription factor activity
JMZ78_RS19940	COG0668	transmembrane transport
JMZ78_RS19950	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JMZ78_RS19975	COG0747	negative chemotaxis
JMZ78_RS19980	COG0601	transmembrane transport
JMZ78_RS19985	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS19990	COG0444	Belongs to the ABC transporter superfamily
JMZ78_RS19995	COG4608	Belongs to the ABC transporter superfamily
JMZ78_RS20000	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JMZ78_RS20005	COG4221	oxidoreductase activity
JMZ78_RS20015	COG4215	(ABC) transporter
JMZ78_RS20020	COG0765	amino acid transport
JMZ78_RS20025	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JMZ78_RS20040	COG0697	spore germination
JMZ78_RS20050	COG3698	Phosphodiester glycosidase
JMZ78_RS20095	COG2315	Protein conserved in bacteria
JMZ78_RS20100	COG0778	Nitroreductase
JMZ78_RS20110	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS20120	COG3716	PTS system mannose fructose sorbose family IID component
JMZ78_RS20125	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JMZ78_RS20130	COG2222	sugar isomerase
JMZ78_RS20135	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JMZ78_RS20135	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JMZ78_RS20150	COG0477	Major facilitator Superfamily
JMZ78_RS20155	COG0668	transmembrane transport
JMZ78_RS20185	COG3188	usher protein
JMZ78_RS20200	COG2771	luxR family
JMZ78_RS20210	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS20220	COG2211	Major facilitator Superfamily
JMZ78_RS20225	COG1113	amino acid transport
JMZ78_RS20240	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS20245	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JMZ78_RS20255	COG0531	amino acid
JMZ78_RS20300	COG0667	Aldo Keto reductase
JMZ78_RS20305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS20310	COG1473	amidohydrolase
JMZ78_RS20340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS20345	COG1120	ATPase activity
JMZ78_RS20350	COG1566	PFAM secretion protein HlyD family protein
JMZ78_RS20395	COG4211	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS20400	COG1129	ABC transporter
JMZ78_RS20415	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS20445	COG3104	oligopeptide transport
JMZ78_RS20450	COG1982	Orn Lys Arg decarboxylase major
JMZ78_RS20455	COG0531	amino acid
JMZ78_RS20460	COG3710	Transcriptional regulator
JMZ78_RS20470	COG1560	Kdo2-lipid A biosynthetic process
JMZ78_RS20485	COG3188	usher protein
JMZ78_RS20490	COG3121	Chaperone
JMZ78_RS20495	COG3539	Fimbrial protein
JMZ78_RS20545	COG3344	reverse transcriptase
JMZ78_RS20725	COG3772	lysozyme
JMZ78_RS20795	COG0305	Participates in initiation and elongation during chromosome replication
JMZ78_RS20895	COG2501	S4 domain
JMZ78_RS20905	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JMZ78_RS20920	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JMZ78_RS20925	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JMZ78_RS20945	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JMZ78_RS20950	COG4181	ATPase activity
JMZ78_RS20955	COG2755	lipolytic protein G-D-S-L family
JMZ78_RS20960	COG0300	oxidoreductase activity
JMZ78_RS20965	COG3118	belongs to the thioredoxin family
JMZ78_RS20970	COG0390	transport system, permease component
JMZ78_RS20975	COG4619	ABC transporter
JMZ78_RS20980	COG0330	HflC and HflK could
JMZ78_RS20985	COG1585	Membrane protein implicated in regulation of membrane protease activity
JMZ78_RS21000	COG3735	TraB family
JMZ78_RS21005	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JMZ78_RS21015	COG2223	nitrite transmembrane transporter activity
JMZ78_RS21020	COG4651	solute:proton antiporter activity
JMZ78_RS21020	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JMZ78_RS21025	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS21065	COG2832	Protein of unknown function (DUF454)
JMZ78_RS21070	COG3923	Primosomal replication protein n
JMZ78_RS21080	COG5464	transposase or invertase
JMZ78_RS21085	COG3264	Mechanosensitive ion channel
JMZ78_RS21085	COG1196	nuclear chromosome segregation
JMZ78_RS21090	COG1309	transcriptional regulator
JMZ78_RS21095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS21100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JMZ78_RS21115	COG0110	maltose O-acetyltransferase activity
JMZ78_RS21165	COG1874	Beta-galactosidase
JMZ78_RS21170	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JMZ78_RS21175	COG3833	ABC-type maltose transport systems, permease component
JMZ78_RS21180	COG1175	transmembrane transport
JMZ78_RS21185	COG2182	Extracellular solute-binding protein
JMZ78_RS21195	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JMZ78_RS21210	COG2364	Membrane
JMZ78_RS21240	COG3695	enzyme binding
JMZ78_RS21245	COG3126	Type III secretion system lipoprotein chaperone (YscW)
JMZ78_RS21250	COG1946	Acyl-CoA thioesterase
JMZ78_RS21255	COG0004	ammonium transporteR
JMZ78_RS21260	COG0347	Belongs to the P(II) protein family
JMZ78_RS21265	COG1132	(ABC) transporter
JMZ78_RS21270	COG1132	(ABC) transporter
JMZ78_RS21275	COG1522	sequence-specific DNA binding
JMZ78_RS21290	COG4533	DNA binding
JMZ78_RS21300	COG0824	Thioesterase
JMZ78_RS21305	COG1555	photosystem II stabilization
JMZ78_RS21310	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JMZ78_RS21315	COG0776	regulation of translation
JMZ78_RS21320	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JMZ78_RS21340	COG0271	Belongs to the BolA IbaG family
JMZ78_RS21345	COG3056	Lipoprotein
JMZ78_RS21350	COG2223	nitrite transmembrane transporter activity
JMZ78_RS21355	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JMZ78_RS21360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JMZ78_RS21365	COG1845	cytochrome c oxidase, subunit III
JMZ78_RS21370	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JMZ78_RS21385	COG1414	Transcriptional regulator
JMZ78_RS21390	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JMZ78_RS21395	COG1053	succinate dehydrogenase
JMZ78_RS21405	COG1053	succinate dehydrogenase
JMZ78_RS21420	COG0673	inositol 2-dehydrogenase activity
JMZ78_RS21425	COG2814	Major facilitator Superfamily
JMZ78_RS21435	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JMZ78_RS21440	COG0693	protein deglycase activity
JMZ78_RS21460	COG0142	geranyltranstransferase activity
JMZ78_RS21470	COG0667	Aldo Keto reductase
JMZ78_RS21475	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JMZ78_RS21495	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JMZ78_RS21495	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JMZ78_RS21505	COG4238	major outer membrane lipoprotein
JMZ78_RS21525	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JMZ78_RS21530	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JMZ78_RS21535	COG1862	Preprotein translocase
JMZ78_RS21560	COG0450	alkyl hydroperoxide reductase
JMZ78_RS21570	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS21585	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS21595	COG1228	amidohydrolase
JMZ78_RS21605	COG1335	isochorismatase
JMZ78_RS21610	COG0583	DNA-binding transcription factor activity
JMZ78_RS21615	COG0366	Alpha amylase catalytic
JMZ78_RS21640	COG0420	3'-5' exonuclease activity
JMZ78_RS21645	COG0419	ATPase involved in DNA repair
JMZ78_RS21650	COG1940	carbohydrate kinase activity
JMZ78_RS21665	COG4126	flavin adenine dinucleotide binding
JMZ78_RS21675	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JMZ78_RS21680	COG3416	Protein conserved in bacteria
JMZ78_RS21690	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JMZ78_RS21700	COG1785	Belongs to the alkaline phosphatase family
JMZ78_RS21740	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JMZ78_RS21745	COG1335	isochorismatase
JMZ78_RS21750	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JMZ78_RS21755	COG0113	porphobilinogen synthase activity
JMZ78_RS21765	COG2175	clavaminate synthase activity
JMZ78_RS21770	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JMZ78_RS21775	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
JMZ78_RS21780	COG4521	taurine ABC transporter
JMZ78_RS21785	COG2040	homocysteine
JMZ78_RS21790	COG0833	amino acid
JMZ78_RS21805	COG4303	Ethanolamine ammonia lyase large subunit
JMZ78_RS21810	COG4302	ethanolamine ammonia-lyase activity
JMZ78_RS21850	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS21855	COG1126	abc transporter atp-binding protein
JMZ78_RS21860	COG0765	amino acid transport
JMZ78_RS21865	COG0765	amino acid transport
JMZ78_RS21880	COG3188	usher protein
JMZ78_RS21905	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
JMZ78_RS21915	COG3639	organic phosphonate transmembrane transporter activity
JMZ78_RS21935	COG0791	NLP P60 protein
JMZ78_RS21960	COG0582	viral genome integration into host DNA
JMZ78_RS21965	COG1192	Involved in chromosome partitioning
JMZ78_RS22025	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JMZ78_RS22030	COG0022	dehydrogenase e1 component
JMZ78_RS22035	COG0508	dehydrogenase complex catalyzes the overall conversion of
JMZ78_RS22040	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JMZ78_RS22060	COG1070	Carbohydrate kinase
JMZ78_RS22065	COG1028	Short-chain dehydrogenase reductase Sdr
JMZ78_RS22070	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JMZ78_RS22075	COG3775	system Galactitol-specific IIC component
JMZ78_RS22080	COG0625	glutathione transferase activity
JMZ78_RS22085	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JMZ78_RS22100	COG0579	oxidoreductase
JMZ78_RS22105	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS22110	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JMZ78_RS22115	COG1113	amino acid transport
JMZ78_RS22120	COG1802	Transcriptional regulator
JMZ78_RS22140	COG2195	Cleaves the N-terminal amino acid of tripeptides
JMZ78_RS22145	COG0454	-acetyltransferase
JMZ78_RS22160	COG2991	Protein conserved in bacteria
JMZ78_RS22175	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JMZ78_RS22180	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JMZ78_RS22195	COG3034	peptidoglycan biosynthetic process
JMZ78_RS22200	COG0121	glutamine amidotransferase
JMZ78_RS22210	COG1960	acyl-CoA dehydrogenase activity
JMZ78_RS22215	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JMZ78_RS22225	COG0583	DNA-binding transcription factor activity
JMZ78_RS22235	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JMZ78_RS22245	COG2226	methyltransferase
JMZ78_RS22255	COG1388	LysM domain
JMZ78_RS22255	COG0741	lytic transglycosylase activity
JMZ78_RS22260	COG2226	methyltransferase
JMZ78_RS22270	COG2814	Major facilitator Superfamily
JMZ78_RS22275	COG0583	DNA-binding transcription factor activity
JMZ78_RS22280	COG0656	L-ascorbic acid biosynthetic process
JMZ78_RS22315	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JMZ78_RS22325	COG2011	ABC-type metal ion transport system permease component
JMZ78_RS22330	COG1464	Belongs to the NlpA lipoprotein family
JMZ78_RS22340	COG1720	tRNA m6t6A37 methyltransferase activity
JMZ78_RS22350	COG0791	NLP P60 protein
JMZ78_RS22355	COG3015	lipoprotein NlpE involved in copper resistance
JMZ78_RS22360	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JMZ78_RS22375	COG4568	rho-dependent transcription termination
JMZ78_RS22385	COG0346	lactoylglutathione lyase activity
JMZ78_RS22390	COG1982	Orn Lys Arg decarboxylase major
JMZ78_RS22430	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
JMZ78_RS22440	COG0750	zinc metalloprotease
JMZ78_RS22445	COG0575	Belongs to the CDS family
JMZ78_RS22455	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JMZ78_RS22480	COG0024	Methionine aminopeptidase
JMZ78_RS22485	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JMZ78_RS22500	COG3835	regulator
JMZ78_RS22505	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JMZ78_RS22525	COG2860	membrane
JMZ78_RS22545	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS22550	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JMZ78_RS22555	COG1120	ATPase activity
JMZ78_RS22560	COG4774	siderophore transport
JMZ78_RS22565	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JMZ78_RS22660	COG1643	Atp-dependent helicase
JMZ78_RS22665	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JMZ78_RS22685	COG0617	tRNA 3'-terminal CCA addition
JMZ78_RS22690	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JMZ78_RS22710	COG0726	polysaccharide deacetylase
JMZ78_RS22715	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS22720	COG0842	Transport permease protein
JMZ78_RS22725	COG1131	(ABC) transporter
JMZ78_RS22730	COG0288	reversible hydration of carbon dioxide
JMZ78_RS22745	COG4993	Dehydrogenase
JMZ78_RS22750	COG2132	Multicopper oxidase
JMZ78_RS22800	COG3064	Membrane
JMZ78_RS22815	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JMZ78_RS22820	COG0508	dehydrogenase complex catalyzes the overall conversion of
JMZ78_RS22825	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JMZ78_RS22830	COG2186	Transcriptional regulator
JMZ78_RS22835	COG1113	amino acid transport
JMZ78_RS22840	COG2211	Major facilitator Superfamily
JMZ78_RS22845	COG3940	Belongs to the glycosyl hydrolase 43 family
JMZ78_RS22850	COG3725	Membrane protein required for beta-lactamase induction
JMZ78_RS22855	COG3023	N-Acetylmuramoyl-L-alanine amidase
JMZ78_RS22865	COG4969	Belongs to the N-Me-Phe pilin family
JMZ78_RS22870	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JMZ78_RS22875	COG1459	type II secretion system
JMZ78_RS22900	COG0494	nUDIX hydrolase
JMZ78_RS22920	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JMZ78_RS22925	COG0849	cell division
JMZ78_RS22950	COG0772	Belongs to the SEDS family
JMZ78_RS22965	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JMZ78_RS22970	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JMZ78_RS22975	COG0768	penicillin binding
JMZ78_RS22995	COG1609	Transcriptional regulator
JMZ78_RS23005	COG0028	Belongs to the TPP enzyme family
JMZ78_RS23050	COG0738	Major facilitator superfamily
JMZ78_RS23060	COG0583	DNA-binding transcription factor activity
JMZ78_RS23065	COG2271	Major facilitator Superfamily
JMZ78_RS23070	COG2814	Major facilitator Superfamily
JMZ78_RS23090	COG1178	ABC-type Fe3 transport system permease component
JMZ78_RS23100	COG0586	Pfam SNARE associated Golgi protein
JMZ78_RS23120	COG0235	Class ii aldolase
JMZ78_RS23125	COG0417	DNA replication proofreading
JMZ78_RS23135	COG0564	pseudouridine synthase activity
JMZ78_RS23145	COG3493	citrate carrier protein
JMZ78_RS23160	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JMZ78_RS23165	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JMZ78_RS23175	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JMZ78_RS23220	COG0505	Belongs to the CarA family
JMZ78_RS23285	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JMZ78_RS23310	COG1047	Peptidyl-prolyl cis-trans
JMZ78_RS23325	COG0196	riboflavin kinase activity
JMZ78_RS23335	COG0583	DNA-binding transcription factor activity
JMZ78_RS23360	COG4735	regulation of single-species biofilm formation
JMZ78_RS23365	COG1584	GPR1 FUN34 yaaH family protein
JMZ78_RS23370	COG0477	Major facilitator Superfamily
JMZ78_RS23375	COG0521	Mo-molybdopterin cofactor biosynthetic process
JMZ78_RS23380	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JMZ78_RS23385	COG1115	amino acid carrier protein
JMZ78_RS23400	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JMZ78_RS23410	COG0460	homoserine dehydrogenase
JMZ78_RS23410	COG0527	aspartate kinase activity
JMZ78_RS23420	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
JMZ78_RS23430	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS23435	COG4452	Inner membrane protein CreD
JMZ78_RS23440	COG2205	protein histidine kinase activity
JMZ78_RS23445	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS23450	COG3045	CreA protein
JMZ78_RS23455	COG3708	Transcriptional regulator
JMZ78_RS23455	COG2207	Transcriptional regulator
JMZ78_RS23475	COG0741	lytic transglycosylase activity
JMZ78_RS23480	COG0488	(ABC) transporter
JMZ78_RS23490	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JMZ78_RS23495	COG0560	Phosphoserine phosphatase
JMZ78_RS23500	COG3726	membrane protein affecting hemolysin expression
JMZ78_RS23530	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JMZ78_RS23535	COG0084	hydrolase, TatD family'
JMZ78_RS23540	COG4667	esterase of the alpha-beta hydrolase superfamily
JMZ78_RS23550	COG2823	Periplasmic or secreted lipoprotein
JMZ78_RS23560	COG1011	Hydrolase
JMZ78_RS23565	COG0456	acetyltransferase
JMZ78_RS23570	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
JMZ78_RS23605	COG3706	GGDEF domain
JMZ78_RS23610	COG4114	ferric iron reductase
JMZ78_RS23615	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS23615	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS23620	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JMZ78_RS23625	COG2197	response regulator
JMZ78_RS23630	COG2197	response regulator
JMZ78_RS23645	COG2966	Psort location CytoplasmicMembrane, score
JMZ78_RS23660	COG1484	DNA-dependent DNA replication
JMZ78_RS23675	COG5464	transposase or invertase
JMZ78_RS23685	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JMZ78_RS23690	COG3716	PTS system mannose fructose sorbose family IID component
JMZ78_RS23695	COG3715	PTS system
JMZ78_RS23710	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JMZ78_RS23710	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JMZ78_RS23720	COG1063	alcohol dehydrogenase
JMZ78_RS23725	COG1802	Transcriptional regulator
JMZ78_RS23730	COG2271	Major facilitator Superfamily
JMZ78_RS23735	COG0456	acetyltransferase
JMZ78_RS23735	COG1214	PFAM Peptidase M22, glycoprotease
JMZ78_RS23745	COG1737	Transcriptional regulator
JMZ78_RS23750	COG0800	Aldolase
JMZ78_RS23755	COG3734	2-keto-3-deoxy-galactonokinase
JMZ78_RS23770	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
JMZ78_RS23800	COG1846	Transcriptional regulator
JMZ78_RS23810	COG0179	Fumarylacetoacetate (FAA) hydrolase
JMZ78_RS23820	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS23825	COG3384	dioxygenase
JMZ78_RS23835	COG3971	2-oxopent-4-enoate hydratase activity
JMZ78_RS23855	COG2368	4-hydroxyphenylacetate
JMZ78_RS23860	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JMZ78_RS23875	COG1966	Carbon starvation protein
JMZ78_RS23880	COG2879	small protein
JMZ78_RS23885	COG0523	cobalamin synthesis protein
JMZ78_RS23895	COG1012	belongs to the aldehyde dehydrogenase family
JMZ78_RS23900	COG5464	transposase or invertase
JMZ78_RS23905	COG1917	Cupin 2, conserved barrel domain protein
JMZ78_RS23905	COG2207	Transcriptional regulator
JMZ78_RS23915	COG2733	membrane
JMZ78_RS23930	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
JMZ78_RS23935	COG1924	4 iron, 4 sulfur cluster binding
JMZ78_RS23950	COG1566	PFAM secretion protein HlyD family protein
JMZ78_RS23960	COG5457	Domain of unknown function (DUF1127)
JMZ78_RS23965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JMZ78_RS23975	COG0583	DNA-binding transcription factor activity
JMZ78_RS23980	COG2249	NAD(P)H dehydrogenase (quinone) activity
JMZ78_RS23990	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS23995	COG1129	ABC transporter
JMZ78_RS24000	COG1879	ABC-type sugar transport system periplasmic component
JMZ78_RS24010	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS24015	COG1129	ABC transporter
JMZ78_RS24015	COG0842	Transport permease protein
JMZ78_RS24020	COG0842	Transport permease protein
JMZ78_RS24050	COG2850	peptidyl-arginine hydroxylation
JMZ78_RS24065	COG5002	protein histidine kinase activity
JMZ78_RS24070	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS24075	COG1538	Outer membrane efflux protein
JMZ78_RS24080	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS24085	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS24090	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JMZ78_RS24100	COG3040	lipid binding
JMZ78_RS24105	COG0789	Transcriptional regulator
JMZ78_RS24115	COG0300	oxidoreductase activity
JMZ78_RS24130	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JMZ78_RS24150	COG3272	Protein of unknown function (DUF1722)
JMZ78_RS24155	COG4580	involved in the transport of maltose and maltodextrins
JMZ78_RS24165	COG2211	Major facilitator Superfamily
JMZ78_RS24170	COG3507	Belongs to the glycosyl hydrolase 43 family
JMZ78_RS24280	COG0582	viral genome integration into host DNA
JMZ78_RS24290	COG0288	reversible hydration of carbon dioxide
JMZ78_RS24295	COG0659	secondary active sulfate transmembrane transporter activity
JMZ78_RS24300	COG1064	alcohol dehydrogenase
JMZ78_RS24305	COG1175	transmembrane transport
JMZ78_RS24310	COG0395	ABC-type sugar transport system, permease component
JMZ78_RS24315	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JMZ78_RS24320	COG3842	ATPase activity
JMZ78_RS24325	COG1653	transport
JMZ78_RS24335	COG1082	Xylose isomerase domain protein TIM barrel
JMZ78_RS24345	COG3962	Belongs to the TPP enzyme family
JMZ78_RS24350	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS24355	COG0837	glucose binding
JMZ78_RS24355	COG1737	Transcriptional regulator
JMZ78_RS24360	COG3718	enzyme involved in inositol metabolism
JMZ78_RS24375	COG0433	COG0433 Predicted ATPase
JMZ78_RS24380	COG0795	lipopolysaccharide-transporting ATPase activity
JMZ78_RS24385	COG0795	lipopolysaccharide-transporting ATPase activity
JMZ78_RS24395	COG2927	DNA polymerase III (CHI subunit)
JMZ78_RS24400	COG0525	valine-tRNA ligase activity
JMZ78_RS24425	COG2188	Transcriptional regulator
JMZ78_RS24430	COG1288	antiporter activity
JMZ78_RS24435	COG1228	amidohydrolase
JMZ78_RS24440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS24445	COG2222	sugar isomerase
JMZ78_RS24450	COG2731	YhcH YjgK YiaL family protein
JMZ78_RS24485	COG1263	PTS System
JMZ78_RS24485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JMZ78_RS24490	COG0366	Alpha amylase catalytic
JMZ78_RS24495	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JMZ78_RS24500	COG1486	melibiose metabolic process
JMZ78_RS24525	COG0602	queuosine metabolic process
JMZ78_RS24530	COG2026	Addiction module toxin, RelE StbE family
JMZ78_RS24535	COG3077	Addiction module antitoxin, RelB DinJ family
JMZ78_RS24540	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JMZ78_RS24540	COG3711	transcriptional antiterminator
JMZ78_RS24545	COG2706	6-phosphogluconolactonase activity
JMZ78_RS24560	COG3964	amidohydrolase
JMZ78_RS24600	COG0312	modulator of DNA gyrase
JMZ78_RS24625	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JMZ78_RS24635	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS24640	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS24645	COG1129	ABC transporter
JMZ78_RS24650	COG1879	ABC-type sugar transport system periplasmic component
JMZ78_RS24670	COG2105	PFAM AIG2 family protein
JMZ78_RS24675	COG2911	Protein conserved in bacteria
JMZ78_RS24680	COG0729	surface antigen
JMZ78_RS24690	COG1253	flavin adenine dinucleotide binding
JMZ78_RS24705	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
JMZ78_RS24720	COG1733	regulation of RNA biosynthetic process
JMZ78_RS24725	COG0702	epimerase
JMZ78_RS24735	COG0697	spore germination
JMZ78_RS24745	COG1113	amino acid transport
JMZ78_RS24750	COG0545	Peptidyl-prolyl cis-trans isomerase
JMZ78_RS24755	COG3061	Opacity-associated protein A
JMZ78_RS24765	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JMZ78_RS24770	COG2965	DNA replication, synthesis of RNA primer
JMZ78_RS24830	COG1073	alpha beta
JMZ78_RS24835	COG3650	response to hydrogen peroxide
JMZ78_RS24845	COG1960	acyl-CoA dehydrogenase activity
JMZ78_RS24850	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JMZ78_RS24855	COG0557	exoribonuclease II activity
JMZ78_RS24870	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
JMZ78_RS24880	COG0330	HflC and HflK could
JMZ78_RS24885	COG0330	HflC and HflK could
JMZ78_RS24890	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JMZ78_RS24910	COG0860	N-Acetylmuramoyl-L-alanine amidase
JMZ78_RS24915	COG0802	atpase or kinase
JMZ78_RS24920	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JMZ78_RS24920	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JMZ78_RS24925	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JMZ78_RS24945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JMZ78_RS24965	COG3264	Mechanosensitive ion channel
JMZ78_RS24965	COG1511	domain protein
JMZ78_RS24980	COG1053	succinate dehydrogenase
JMZ78_RS24985	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JMZ78_RS25005	COG2076	Multidrug Resistance protein
JMZ78_RS25010	COG5510	response to toxic substance
JMZ78_RS25025	COG1509	lysine 2,3-aminomutase activity
JMZ78_RS25105	COG0531	amino acid
JMZ78_RS25110	COG3030	protein affecting phage T7 exclusion by the F plasmid
JMZ78_RS25115	COG1027	Aspartate ammonia-lyase
JMZ78_RS25120	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JMZ78_RS25135	COG1309	transcriptional regulator
JMZ78_RS25170	COG0457	Tetratricopeptide repeat
JMZ78_RS25175	COG0726	polysaccharide deacetylase
JMZ78_RS25175	COG1649	PFAM Uncharacterised BCR, COG1649
JMZ78_RS25180	COG1215	transferase activity, transferring glycosyl groups
JMZ78_RS25195	COG0861	Integral membrane protein TerC family
JMZ78_RS25240	COG1486	melibiose metabolic process
JMZ78_RS25245	COG2169	Transcriptional regulator
JMZ78_RS25255	COG2824	Alkylphosphonate utilization operon protein PhnA
JMZ78_RS25260	COG2764	glyoxalase bleomycin resistance protein dioxygenase
JMZ78_RS25265	COG2188	Transcriptional regulator
JMZ78_RS25270	COG3624	Phosphonate C-P lyase system protein PhnG
JMZ78_RS25275	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
JMZ78_RS25280	COG3626	phosphonate metabolism
JMZ78_RS25285	COG3627	carbon phosphorus lyase activity
JMZ78_RS25290	COG4107	phosphonate C-P lyase system protein PhnK
JMZ78_RS25295	COG4778	phosphonate C-P lyase system protein PhnL
JMZ78_RS25300	COG3454	Phosphonate metabolism
JMZ78_RS25310	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JMZ78_RS25320	COG4191	Histidine kinase
JMZ78_RS25320	COG0784	Response regulator, receiver
JMZ78_RS25325	COG1129	ABC transporter
JMZ78_RS25330	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS25365	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JMZ78_RS25370	COG1301	dicarboxylic acid transport
JMZ78_RS25380	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JMZ78_RS25385	COG3162	membrane
JMZ78_RS25415	COG3539	Fimbrial protein
JMZ78_RS25420	COG1346	cytolysis
JMZ78_RS25425	COG1380	Effector of murein hydrolase LrgA
JMZ78_RS25430	COG0583	DNA-binding transcription factor activity
JMZ78_RS25435	COG0025	NhaP-type Na H and K H
JMZ78_RS25440	COG2252	PERMEase
JMZ78_RS25445	COG0625	glutathione transferase activity
JMZ78_RS25450	COG0789	Transcriptional regulator
JMZ78_RS25460	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JMZ78_RS25490	COG1234	tRNA 3'-trailer cleavage
JMZ78_RS25495	COG1609	Transcriptional regulator
JMZ78_RS25500	COG0483	inositol monophosphate 1-phosphatase activity
JMZ78_RS25510	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JMZ78_RS25530	COG4771	TonB-dependent receptor
JMZ78_RS25535	COG0741	lytic transglycosylase activity
JMZ78_RS25550	COG2315	Protein conserved in bacteria
JMZ78_RS25555	COG0432	Pfam Uncharacterised protein family UPF0047
JMZ78_RS25570	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JMZ78_RS25575	COG0305	Participates in initiation and elongation during chromosome replication
JMZ78_RS25590	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JMZ78_RS25600	COG0735	belongs to the Fur family
JMZ78_RS25605	COG3237	CsbD-like
JMZ78_RS25615	COG0534	Mate efflux family protein
JMZ78_RS25625	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JMZ78_RS25695	COG0251	oxidation-reduction process
JMZ78_RS25705	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JMZ78_RS25715	COG0527	aspartate kinase activity
JMZ78_RS25770	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JMZ78_RS25800	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JMZ78_RS25810	COG0456	acetyltransferase
JMZ78_RS25840	COG0151	Belongs to the GarS family
JMZ78_RS25850	COG4191	Histidine kinase
JMZ78_RS25855	COG3678	ATP-independent chaperone mediated protein folding
JMZ78_RS25890	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
JMZ78_RS25905	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JMZ78_RS25910	COG2104	thiamine diphosphate biosynthetic process
JMZ78_RS25925	COG3706	GGDEF domain
JMZ78_RS25935	COG1447	Phosphotransferase system cellobiose-specific component IIA
JMZ78_RS25940	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JMZ78_RS25975	COG0250	Participates in transcription elongation, termination and antitermination
JMZ78_RS26020	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JMZ78_RS26050	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
JMZ78_RS26060	COG1739	Uncharacterized protein family UPF0029
JMZ78_RS26100	COG0805	protein transport
JMZ78_RS26120	COG3165	ubiquinone biosynthetic process from chorismate
JMZ78_RS26150	COG0583	DNA-binding transcription factor activity
JMZ78_RS26155	COG0697	spore germination
JMZ78_RS26160	COG0561	phosphatase activity
JMZ78_RS26165	COG2267	carboxylic ester hydrolase activity
JMZ78_RS26170	COG1280	lysine exporter protein (LysE YggA)
JMZ78_RS26180	COG1280	lysine exporter protein (LysE YggA)
JMZ78_RS26210	COG0210	DNA helicase
JMZ78_RS26215	COG1011	Hydrolase
JMZ78_RS26245	COG3072	Adenylate cyclase
JMZ78_RS26260	COG2959	enzyme of heme biosynthesis
JMZ78_RS26265	COG3071	HemY protein
JMZ78_RS26310	COG2244	polysaccharide biosynthetic process
JMZ78_RS26315	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JMZ78_RS26320	COG0456	acetyltransferase
JMZ78_RS26325	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JMZ78_RS26330	COG1088	dTDP-glucose 4,6-dehydratase activity
JMZ78_RS26335	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JMZ78_RS26340	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JMZ78_RS26350	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JMZ78_RS26355	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JMZ78_RS26360	COG3118	belongs to the thioredoxin family
JMZ78_RS26370	COG1811	Na channel or pump
JMZ78_RS26380	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JMZ78_RS26385	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JMZ78_RS26395	COG0583	DNA-binding transcription factor activity
JMZ78_RS26400	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JMZ78_RS26415	COG3978	acetolactate synthase activity
JMZ78_RS26440	COG3085	chromosome segregation
JMZ78_RS26515	COG0583	DNA-binding transcription factor activity
JMZ78_RS26530	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JMZ78_RS26545	COG3443	Belongs to the bacterial solute-binding protein 9 family
JMZ78_RS26550	COG2207	Transcriptional regulator
JMZ78_RS26560	COG0371	Dehydrogenase
JMZ78_RS26565	COG0697	spore germination
JMZ78_RS26575	COG0583	DNA-binding transcription factor activity
JMZ78_RS26585	COG0737	Belongs to the 5'-nucleotidase family
JMZ78_RS26595	COG0527	aspartate kinase activity
JMZ78_RS26595	COG0460	homoserine dehydrogenase
JMZ78_RS26600	COG0626	cystathionine gamma-synthase activity
JMZ78_RS26615	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JMZ78_RS26620	COG1609	Transcriptional regulator
JMZ78_RS26625	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JMZ78_RS26640	COG1575	Belongs to the MenA family. Type 1 subfamily
JMZ78_RS26660	COG3678	ATP-independent chaperone mediated protein folding
JMZ78_RS26665	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS26670	COG2205	protein histidine kinase activity
JMZ78_RS26675	COG2258	MOSC domain
JMZ78_RS26680	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JMZ78_RS26720	COG1129	ABC transporter
JMZ78_RS26725	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS26730	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS26735	COG1454	alcohol dehydrogenase
JMZ78_RS26745	COG2211	Major facilitator Superfamily
JMZ78_RS26805	COG0205	6-phosphofructokinase activity
JMZ78_RS26825	COG0437	4 iron, 4 sulfur cluster binding
JMZ78_RS26830	COG2864	formate dehydrogenase
JMZ78_RS26845	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JMZ78_RS26850	COG0657	acetylesterase activity
JMZ78_RS26855	COG0456	acetyltransferase
JMZ78_RS26870	COG1011	Hydrolase
JMZ78_RS26885	COG3852	Histidine kinase
JMZ78_RS26900	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JMZ78_RS26920	COG0204	Acyl-transferase
JMZ78_RS26930	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JMZ78_RS26935	COG3084	Protein conserved in bacteria
JMZ78_RS26945	COG1763	Mo-molybdopterin cofactor biosynthetic process
JMZ78_RS26970	COG2186	Transcriptional regulator
JMZ78_RS26975	COG0477	Major facilitator Superfamily
JMZ78_RS26980	COG1609	Transcriptional regulator
JMZ78_RS26985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JMZ78_RS26995	COG1172	Belongs to the binding-protein-dependent transport system permease family
JMZ78_RS27000	COG1129	ABC transporter
JMZ78_RS27030	COG1522	sequence-specific DNA binding
JMZ78_RS27035	COG0716	FMN binding
JMZ78_RS27050	COG3312	ion transport
JMZ78_RS27100	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JMZ78_RS27105	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JMZ78_RS27110	COG0573	inorganic phosphate transmembrane transporter activity
JMZ78_RS27115	COG0581	inorganic phosphate transmembrane transporter activity
JMZ78_RS27120	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JMZ78_RS27125	COG0704	Plays a role in the regulation of phosphate uptake
JMZ78_RS27135	COG2382	esterase
JMZ78_RS27140	COG0363	glucosamine-6-phosphate deaminase activity
JMZ78_RS27145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JMZ78_RS27150	COG2252	PERMEase
JMZ78_RS27155	COG0431	NADPH-dependent FMN reductase
JMZ78_RS27160	COG2091	lysine biosynthetic process via aminoadipic acid
JMZ78_RS27190	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JMZ78_RS27300	COG2199	diguanylate cyclase activity
JMZ78_RS27300	COG2203	Gaf domain
JMZ78_RS27305	COG1716	ATPase activity
JMZ78_RS27305	COG5001	Diguanylate cyclase
JMZ78_RS27320	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JMZ78_RS27330	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JMZ78_RS27375	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JMZ78_RS27405	COG0739	heme binding
JMZ78_RS27415	COG2132	Multicopper oxidase
JMZ78_RS27420	COG3667	copper resistance
JMZ78_RS27425	COG2372	response to copper ion
JMZ78_RS27430	COG1276	copper resistance
JMZ78_RS27435	COG0745	RESPONSE REGULATOR receiver
JMZ78_RS27440	COG2205	protein histidine kinase activity
JMZ78_RS27460	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JMZ78_RS27475	COG0431	NADPH-dependent FMN reductase
JMZ78_RS27505	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JMZ78_RS27570	COG2801	Transposase and inactivated derivatives
JMZ78_RS27580	COG0501	Belongs to the peptidase M48B family
JMZ78_RS27595	COG0542	response to heat
JMZ78_RS27600	COG0071	Belongs to the small heat shock protein (HSP20) family
JMZ78_RS27695	COG3173	Aminoglycoside phosphotransferase
JMZ78_RS27720	COG1695	Transcriptional regulator
JMZ78_RS27810	COG3409	Peptidoglycan-binding domain 1 protein
JMZ78_RS27810	COG3429	Glucose-6-phosphate dehydrogenase subunit
JMZ78_RS27820	COG3436	PFAM IS66 Orf2 family protein
JMZ78_RS27835	COG4172	Belongs to the ABC transporter superfamily
JMZ78_RS27850	COG0601	transmembrane transport
JMZ78_RS27855	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JMZ78_RS27885	COG1595	DNA-templated transcription, initiation
JMZ78_RS27890	COG3712	iron ion homeostasis
JMZ78_RS27895	COG4772	TonB-dependent receptor
JMZ78_RS27900	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JMZ78_RS27905	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS27910	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JMZ78_RS27915	COG1120	ATPase activity
JMZ78_RS27920	COG3436	PFAM IS66 Orf2 family protein
JMZ78_RS27940	COG1609	Transcriptional regulator
JMZ78_RS27950	COG2223	nitrite transmembrane transporter activity
JMZ78_RS28210	COG5499	transcription regulator containing HTH domain
JMZ78_RS28280	COG1475	DNA binding
JMZ78_RS28335	COG3344	reverse transcriptase
JMZ78_RS28390	COG5433	transposase activity
JMZ78_RS28415	COG4644	lycopene metabolic process
JMZ78_RS28455	COG3300	MHYT domain
JMZ78_RS28455	COG5001	Diguanylate cyclase
JMZ78_RS28585	COG3344	reverse transcriptase
JMZ78_RS28725	COG4973	Belongs to the 'phage' integrase family. XerC subfamily