locus-tag	class	description
AM455_RS00010	COG3266	domain, Protein
AM455_RS00015	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM455_RS00020	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM455_RS00045	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM455_RS00050	COG0402	S-adenosylhomocysteine deaminase activity
AM455_RS00055	COG0738	Major facilitator superfamily
AM455_RS00080	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM455_RS00085	COG1289	transmembrane transporter activity
AM455_RS00100	COG1765	OsmC-like protein
AM455_RS00105	COG3954	Phosphoribulokinase
AM455_RS00115	COG0429	hydrolase of the alpha beta-hydrolase fold
AM455_RS00125	COG0488	(ABC) transporter
AM455_RS00145	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AM455_RS00150	COG1047	Peptidyl-prolyl cis-trans
AM455_RS00160	COG0545	Peptidyl-prolyl cis-trans isomerase
AM455_RS00165	COG2964	Protein conserved in bacteria
AM455_RS00225	COG0051	transcription antitermination factor activity, RNA binding
AM455_RS00250	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AM455_RS00265	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AM455_RS00330	COG0201	protein transport
AM455_RS00355	COG0202	RNA polymerase activity
AM455_RS00370	COG0789	Transcriptional regulator
AM455_RS00375	COG3036	rescue of stalled ribosome
AM455_RS00405	COG0758	DNA mediated transformation
AM455_RS00415	COG0551	DNA topoisomerase type I activity
AM455_RS00435	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM455_RS00475	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM455_RS00480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS00485	COG1309	transcriptional regulator
AM455_RS00510	COG4145	pantothenate transmembrane transporter activity
AM455_RS00515	COG3924	membrane
AM455_RS00520	COG0439	Biotin carboxylase
AM455_RS00525	COG0511	ligase activity, forming carbon-carbon bonds
AM455_RS00550	COG2200	EAL domain
AM455_RS00550	COG2199	diguanylate cyclase activity
AM455_RS00555	COG1077	Cell shape determining protein MreB Mrl
AM455_RS00560	COG1792	Involved in formation and maintenance of cell shape
AM455_RS00565	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AM455_RS00575	COG1530	ribonuclease E activity
AM455_RS00580	COG3164	Protein of unknown function
AM455_RS00585	COG0312	modulator of DNA gyrase
AM455_RS00590	COG0583	DNA-binding transcription factor activity
AM455_RS00605	COG1289	transmembrane transporter activity
AM455_RS00610	COG2732	(Barnase) inhibitor
AM455_RS00635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM455_RS00640	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM455_RS00645	COG3105	Protein conserved in bacteria
AM455_RS00650	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM455_RS00670	COG0625	glutathione transferase activity
AM455_RS00675	COG2969	positive regulation of protein catabolic process
AM455_RS00685	COG0493	'glutamate synthase
AM455_RS00690	COG0067	glutamate synthase
AM455_RS00690	COG0069	glutamate synthase activity
AM455_RS00690	COG0070	glutamate synthase
AM455_RS00700	COG1242	4 iron, 4 sulfur cluster binding
AM455_RS00705	COG2271	Major facilitator Superfamily
AM455_RS00710	COG1063	alcohol dehydrogenase
AM455_RS00715	COG1312	Catalyzes the dehydration of D-mannonate
AM455_RS00720	COG2198	Histidine kinase
AM455_RS00720	COG0784	Response regulator, receiver
AM455_RS00720	COG5002	protein histidine kinase activity
AM455_RS00725	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AM455_RS00730	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM455_RS00735	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS00745	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS00750	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM455_RS00755	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AM455_RS00760	COG1137	ATPase activity
AM455_RS00765	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AM455_RS00770	COG3117	lipopolysaccharide transmembrane transporter activity
AM455_RS00775	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AM455_RS00785	COG0530	calcium, potassium:sodium antiporter activity
AM455_RS00795	COG1127	ABC transporter
AM455_RS00800	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AM455_RS00805	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM455_RS00810	COG2854	intermembrane phospholipid transfer
AM455_RS00815	COG3113	response to antibiotic
AM455_RS00820	COG5007	Belongs to the BolA IbaG family
AM455_RS00830	COG3423	Transcriptional regulator
AM455_RS00835	COG0142	geranyltranstransferase activity
AM455_RS00850	COG0697	spore germination
AM455_RS00860	COG2027	D-alanyl-D-alanine carboxypeptidase
AM455_RS00870	COG1534	Rna-binding protein
AM455_RS00885	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM455_RS00890	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AM455_RS00900	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM455_RS00940	COG0195	Participates in both transcription termination and antitermination
AM455_RS00990	COG0814	amino acid
AM455_RS00995	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS01000	COG0826	peptidase U32
AM455_RS01005	COG0826	peptidase U32
AM455_RS01010	COG3154	lipid carrier protein
AM455_RS01015	COG3153	acetyltransferase
AM455_RS01030	COG0693	protein deglycase activity
AM455_RS01035	COG0702	epimerase
AM455_RS01040	COG0701	Predicted permease
AM455_RS01045	COG2823	Periplasmic or secreted lipoprotein
AM455_RS01065	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AM455_RS01070	COG2721	sulfolactate sulfo-lyase activity
AM455_RS01075	COG2271	Major facilitator Superfamily
AM455_RS01085	COG2084	Dehydrogenase
AM455_RS01090	COG1929	Belongs to the glycerate kinase type-1 family
AM455_RS01145	COG1741	Belongs to the pirin family
AM455_RS01150	COG0583	DNA-binding transcription factor activity
AM455_RS01155	COG3152	Membrane
AM455_RS01160	COG0435	Glutathione S-transferase
AM455_RS01165	COG2259	Doxx family
AM455_RS01175	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AM455_RS01180	COG4575	ribosome binding
AM455_RS01185	COG1422	Protein of unknown function (DUF1090)
AM455_RS01195	COG0586	Pfam SNARE associated Golgi protein
AM455_RS01205	COG2186	Transcriptional regulator
AM455_RS01210	COG2271	Major facilitator Superfamily
AM455_RS01220	COG2721	sulfolactate sulfo-lyase activity
AM455_RS01235	COG0861	Integral membrane protein TerC family
AM455_RS01240	COG0673	inositol 2-dehydrogenase activity
AM455_RS01245	COG1451	nucleotide metabolic process
AM455_RS01265	COG0446	pyridine nucleotide-disulphide oxidoreductase
AM455_RS01265	COG1902	pentaerythritol trinitrate reductase activity
AM455_RS01320	COG1695	Transcriptional regulator
AM455_RS01325	COG2375	cellular response to nickel ion
AM455_RS01340	COG1461	Dihydroxyacetone kinase
AM455_RS01345	COG2376	Dihydroxyacetone kinase
AM455_RS01420	COG3247	response to pH
AM455_RS01505	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM455_RS01510	COG0358	DNA primase activity
AM455_RS01515	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AM455_RS01575	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM455_RS01590	COG4991	sh3 domain protein
AM455_RS01595	COG3025	triphosphatase activity
AM455_RS01615	COG2960	long-chain fatty acid transporting porin activity
AM455_RS01630	COG3384	dioxygenase
AM455_RS01635	COG0754	glutathionylspermidine amidase activity
AM455_RS01650	COG0494	nUDIX hydrolase
AM455_RS01655	COG3151	Protein conserved in bacteria
AM455_RS01660	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM455_RS01665	COG3150	esterase
AM455_RS01675	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AM455_RS01680	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM455_RS01685	COG0642	Histidine kinase
AM455_RS01695	COG3111	PFAM Bacterial OB fold (BOF) protein
AM455_RS01700	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM455_RS01705	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM455_RS01710	COG0204	Acyl-transferase
AM455_RS01715	COG2132	Multicopper oxidase
AM455_RS01720	COG1032	radical SAM domain protein
AM455_RS01730	COG0656	L-ascorbic acid biosynthetic process
AM455_RS01735	COG1979	alcohol dehydrogenase
AM455_RS01740	COG2207	Transcriptional regulator
AM455_RS01745	COG0586	Pfam SNARE associated Golgi protein
AM455_RS01750	COG0626	cystathionine gamma-synthase activity
AM455_RS01765	COG0848	biopolymer transport protein
AM455_RS01770	COG2211	Major facilitator Superfamily
AM455_RS01795	COG0625	glutathione transferase activity
AM455_RS01805	COG0754	glutathionylspermidine amidase activity
AM455_RS01810	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM455_RS01830	COG0583	DNA-binding transcription factor activity
AM455_RS01835	COG0626	cystathionine gamma-synthase activity
AM455_RS01850	COG1811	Na channel or pump
AM455_RS01860	COG1982	Orn Lys Arg decarboxylase major
AM455_RS01865	COG2211	Major facilitator Superfamily
AM455_RS01880	COG1194	a g-specific adenine glycosylase
AM455_RS01890	COG3171	Protein conserved in bacteria
AM455_RS01900	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM455_RS01915	COG0762	integral membrane protein
AM455_RS01920	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AM455_RS01925	COG2805	Type II/IV secretion system protein
AM455_RS01945	COG0189	ligase activity
AM455_RS01950	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AM455_RS01955	COG2356	endonuclease I
AM455_RS01965	COG2814	Major facilitator Superfamily
AM455_RS02005	COG2146	nitrite reductase [NAD(P)H] activity
AM455_RS02025	COG1414	Transcriptional regulator
AM455_RS02055	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS02060	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
AM455_RS02080	COG0501	Belongs to the peptidase M48B family
AM455_RS02085	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM455_RS02100	COG0191	fructose-bisphosphate aldolase activity
AM455_RS02105	COG0668	transmembrane transport
AM455_RS02115	COG2968	Membrane
AM455_RS02130	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM455_RS02135	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AM455_RS02155	COG0006	proline dipeptidase activity
AM455_RS02160	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM455_RS02165	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM455_RS02185	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS02190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM455_RS02210	COG2723	6-phospho-beta-galactosidase activity
AM455_RS02215	COG1737	Transcriptional regulator
AM455_RS02225	COG1272	protein, Hemolysin III
AM455_RS02235	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AM455_RS02245	COG0716	FMN binding
AM455_RS02250	COG4974	Belongs to the 'phage' integrase family
AM455_RS02260	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AM455_RS02285	COG4942	peptidase
AM455_RS02295	COG2814	Major facilitator Superfamily
AM455_RS02310	COG0667	Aldo Keto reductase
AM455_RS02350	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM455_RS02355	COG1393	Belongs to the ArsC family
AM455_RS02370	COG1538	Outer membrane efflux protein
AM455_RS02375	COG1289	transmembrane transporter activity
AM455_RS02390	COG3592	Divergent 4Fe-4S mono-cluster
AM455_RS02395	COG2388	GCN5-related N-acetyl-transferase
AM455_RS02405	COG3539	Fimbrial protein
AM455_RS02410	COG3539	Fimbrial protein
AM455_RS02415	COG3539	Fimbrial protein
AM455_RS02420	COG3188	usher protein
AM455_RS02425	COG3121	Chaperone
AM455_RS02430	COG3539	Fimbrial protein
AM455_RS02440	COG4974	Belongs to the 'phage' integrase family
AM455_RS02445	COG0582	viral genome integration into host DNA
AM455_RS02455	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM455_RS02460	COG1846	Transcriptional regulator
AM455_RS02465	COG0697	spore germination
AM455_RS02530	COG0667	Aldo Keto reductase
AM455_RS02535	COG0814	amino acid
AM455_RS02550	COG0183	Belongs to the thiolase family
AM455_RS02560	COG0823	Involved in the tonB-independent uptake of proteins
AM455_RS02565	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS02570	COG2814	Major facilitator Superfamily
AM455_RS02600	COG3842	ATPase activity
AM455_RS02605	COG0395	ABC-type sugar transport system, permease component
AM455_RS02610	COG1175	transmembrane transport
AM455_RS02615	COG1917	Cupin 2, conserved barrel domain protein
AM455_RS02620	COG1794	racemase activity, acting on amino acids and derivatives
AM455_RS02625	COG0583	DNA-binding transcription factor activity
AM455_RS02635	COG1609	Transcriptional regulator
AM455_RS02640	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS02645	COG2723	6-phospho-beta-galactosidase activity
AM455_RS02650	COG2186	Transcriptional regulator
AM455_RS02660	COG1609	Transcriptional regulator
AM455_RS02685	COG0667	Aldo Keto reductase
AM455_RS02695	COG0861	Integral membrane protein TerC family
AM455_RS02725	COG2165	general secretion pathway protein
AM455_RS02730	COG4795	General secretion pathway protein
AM455_RS02740	COG4967	type IV pilus modification protein PilV
AM455_RS02745	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AM455_RS02750	COG1025	Belongs to the peptidase M16 family
AM455_RS02755	COG1074	ATP-dependent DNA helicase activity
AM455_RS02760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AM455_RS02770	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AM455_RS02770	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AM455_RS02775	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM455_RS02780	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AM455_RS02810	COG4656	Part of a membrane complex involved in electron transport
AM455_RS02815	COG1454	alcohol dehydrogenase
AM455_RS02815	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS02845	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM455_RS03010	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AM455_RS03015	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AM455_RS03020	COG2166	iron-sulfur cluster assembly
AM455_RS03025	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AM455_RS03035	COG0583	DNA-binding transcription factor activity
AM455_RS03040	COG2363	Small membrane protein
AM455_RS03050	COG1349	DNA-binding transcription factor activity
AM455_RS03070	COG0738	Major facilitator superfamily
AM455_RS03075	COG0235	Class ii aldolase
AM455_RS03080	COG1454	alcohol dehydrogenase
AM455_RS03095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS03115	COG2011	ABC-type metal ion transport system permease component
AM455_RS03120	COG1464	Belongs to the NlpA lipoprotein family
AM455_RS03130	COG0477	Major facilitator Superfamily
AM455_RS03140	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM455_RS03145	COG1760	l-serine dehydratase
AM455_RS03150	COG0814	amino acid
AM455_RS03155	COG1611	Belongs to the LOG family
AM455_RS03170	COG3098	single-species biofilm formation
AM455_RS03175	COG0564	pseudouridine synthase activity
AM455_RS03180	COG0716	FMN binding
AM455_RS03190	COG2271	Major facilitator Superfamily
AM455_RS03195	COG4948	Mandelate Racemase Muconate Lactonizing
AM455_RS03200	COG4948	Mandelate Racemase Muconate Lactonizing
AM455_RS03205	COG1929	Belongs to the glycerate kinase type-1 family
AM455_RS03215	COG4999	Histidine kinase
AM455_RS03215	COG3850	Histidine kinase
AM455_RS03215	COG2205	protein histidine kinase activity
AM455_RS03215	COG3437	response regulator, receiver
AM455_RS03225	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM455_RS03230	COG3956	TIGRFAM MazG family protein
AM455_RS03250	COG0602	queuosine metabolic process
AM455_RS03255	COG0720	synthase
AM455_RS03275	COG2234	aminopeptidase activity
AM455_RS03335	COG4942	peptidase
AM455_RS03335	COG1388	LysM domain
AM455_RS03340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM455_RS03365	COG0163	prenyltransferase activity
AM455_RS03370	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM455_RS03420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS03425	COG4558	Periplasmic binding protein
AM455_RS03430	COG3720	iron ion transport
AM455_RS03450	COG0679	Auxin Efflux Carrier
AM455_RS03465	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM455_RS03470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM455_RS03475	COG1121	(ABC) transporter
AM455_RS03485	COG1609	Transcriptional regulator
AM455_RS03490	COG1940	carbohydrate kinase activity
AM455_RS03495	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM455_RS03500	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS03505	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS03510	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS03520	COG4580	involved in the transport of maltose and maltodextrins
AM455_RS03530	COG2723	6-phospho-beta-galactosidase activity
AM455_RS03540	COG0309	Hydrogenase expression formation protein (HypE)
AM455_RS03545	COG0409	Hydrogenase expression formation protein
AM455_RS03550	COG0298	carbon dioxide binding
AM455_RS03555	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AM455_RS03575	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM455_RS03580	COG0651	ATP synthesis coupled electron transport
AM455_RS03585	COG0650	Formate hydrogenlyase subunit 4
AM455_RS03590	COG3261	NADH dehydrogenase
AM455_RS03590	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM455_RS03595	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM455_RS03600	COG3260	NADH ubiquinone oxidoreductase 20
AM455_RS03610	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM455_RS03620	COG2723	6-phospho-beta-galactosidase activity
AM455_RS03625	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS03625	COG1263	PTS System
AM455_RS03630	COG1609	Transcriptional regulator
AM455_RS03635	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM455_RS03640	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AM455_RS03645	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
AM455_RS03675	COG1349	DNA-binding transcription factor activity
AM455_RS03680	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS03685	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS03695	COG3732	PTS system glucitol sorbitol-specific
AM455_RS03700	COG3730	PTS system glucitol sorbitol-specific
AM455_RS03705	COG2951	lytic endotransglycosylase activity
AM455_RS03715	COG1121	(ABC) transporter
AM455_RS03720	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM455_RS03725	COG0803	Belongs to the bacterial solute-binding protein 9 family
AM455_RS03730	COG1546	Belongs to the CinA family
AM455_RS03755	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AM455_RS03785	COG2823	Periplasmic or secreted lipoprotein
AM455_RS03790	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM455_RS03795	COG1238	metal cluster binding
AM455_RS03815	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AM455_RS03820	COG2814	Major facilitator Superfamily
AM455_RS03825	COG1566	PFAM secretion protein HlyD family protein
AM455_RS03830	COG1846	Transcriptional regulator
AM455_RS03840	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM455_RS03850	COG4176	ABC-type proline glycine betaine transport system permease component
AM455_RS03865	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM455_RS03875	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM455_RS03880	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM455_RS03885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM455_RS03890	COG4575	ribosome binding
AM455_RS03915	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM455_RS03930	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM455_RS03935	COG0640	Transcriptional regulator
AM455_RS03945	COG0583	DNA-binding transcription factor activity
AM455_RS03950	COG3284	Transcriptional regulator
AM455_RS03960	COG3539	Fimbrial protein
AM455_RS03965	COG3121	Chaperone
AM455_RS03985	COG3188	usher protein
AM455_RS03995	COG3539	Fimbrial protein
AM455_RS04000	COG2197	response regulator
AM455_RS04015	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS04025	COG0235	Class ii aldolase
AM455_RS04035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS04070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS04075	COG2207	Transcriptional regulator
AM455_RS04075	COG3708	Transcriptional regulator
AM455_RS04105	COG2867	negative regulation of translational initiation
AM455_RS04120	COG0497	DNA recombination
AM455_RS04140	COG4536	flavin adenine dinucleotide binding
AM455_RS04145	COG4137	Cytochrome C assembly protein
AM455_RS04150	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AM455_RS04185	COG2885	chlorophyll binding
AM455_RS04190	COG2199	diguanylate cyclase activity
AM455_RS04200	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM455_RS04205	COG0287	Prephenate dehydrogenase
AM455_RS04205	COG1605	Chorismate mutase
AM455_RS04215	COG1605	Chorismate mutase
AM455_RS04215	COG0077	Prephenate dehydratase
AM455_RS04220	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM455_RS04225	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM455_RS04240	COG0542	response to heat
AM455_RS04270	COG0477	Major facilitator Superfamily
AM455_RS04275	COG5544	Lipoprotein
AM455_RS04280	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM455_RS04290	COG3148	PFAM DTW domain containing protein
AM455_RS04295	COG3118	belongs to the thioredoxin family
AM455_RS04300	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM455_RS04315	COG0513	Belongs to the DEAD box helicase family
AM455_RS04325	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AM455_RS04335	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AM455_RS04340	COG3026	antisigma factor binding
AM455_RS04345	COG3086	response to oxidative stress
AM455_RS04355	COG0681	Belongs to the peptidase S26 family
AM455_RS04375	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AM455_RS04385	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM455_RS04490	COG1484	DNA-dependent DNA replication
AM455_RS04560	COG1802	Transcriptional regulator
AM455_RS04560	COG4626	Terminase
AM455_RS04565	COG4695	Portal protein
AM455_RS04570	COG0740	serine-type endopeptidase activity
AM455_RS04610	COG4386	tail sheath protein
AM455_RS04655	COG3299	homolog of phage Mu protein gp47
AM455_RS04660	COG3778	Protein conserved in bacteria
AM455_RS04675	COG0463	Glycosyl transferase, family 2
AM455_RS04690	COG1737	Transcriptional regulator
AM455_RS04695	COG0560	Phosphoserine phosphatase
AM455_RS04710	COG0047	phosphoribosylformylglycinamidine synthase activity
AM455_RS04710	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AM455_RS04715	COG2205	protein histidine kinase activity
AM455_RS04720	COG3170	Tfp pilus assembly protein FimV
AM455_RS04725	COG2204	response regulator
AM455_RS04730	COG0347	Belongs to the P(II) protein family
AM455_RS04735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM455_RS04735	COG1017	nitric oxide dioxygenase activity
AM455_RS04750	COG2259	Doxx family
AM455_RS04755	COG1940	carbohydrate kinase activity
AM455_RS04765	COG0477	Major facilitator Superfamily
AM455_RS04765	COG2814	Major facilitator Superfamily
AM455_RS04770	COG2017	converts alpha-aldose to the beta-anomer
AM455_RS04775	COG2814	Major facilitator Superfamily
AM455_RS04780	COG3711	transcriptional antiterminator
AM455_RS04785	COG3683	transport system, periplasmic component
AM455_RS04790	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM455_RS04820	COG0822	iron-sulfur transferase activity
AM455_RS04840	COG0633	Ferredoxin
AM455_RS04845	COG2975	iron-sulfur cluster assembly
AM455_RS04865	COG2897	thiosulfate sulfurtransferase activity
AM455_RS04870	COG2373	Large extracellular alpha-helical protein
AM455_RS04875	COG4953	penicillin-binding protein 1C
AM455_RS04910	COG2976	Protein conserved in bacteria
AM455_RS04930	COG1645	bacterial-type flagellum-dependent swarming motility
AM455_RS04940	COG0516	GMP reductase activity
AM455_RS04940	COG0517	IMP dehydrogenase activity
AM455_RS04950	COG3119	arylsulfatase activity
AM455_RS04955	COG0641	radical SAM
AM455_RS04975	COG2200	EAL domain
AM455_RS04990	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AM455_RS05005	COG2723	6-phospho-beta-galactosidase activity
AM455_RS05015	COG2233	PERMEase
AM455_RS05030	COG1393	Belongs to the ArsC family
AM455_RS05035	COG4783	chaperone-mediated protein folding
AM455_RS05040	COG0628	permease
AM455_RS05045	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AM455_RS05050	COG2716	regulation of RNA biosynthetic process
AM455_RS05060	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AM455_RS05070	COG2321	neutral zinc metallopeptidase
AM455_RS05075	COG1444	tRNA N-acetyltransferase activity
AM455_RS05080	COG0400	carboxylic ester hydrolase activity
AM455_RS05095	COG1393	Belongs to the ArsC family
AM455_RS05105	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM455_RS05115	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM455_RS05115	COG0493	'glutamate synthase
AM455_RS05125	COG5342	invasion associated locus B
AM455_RS05130	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM455_RS05135	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM455_RS05145	COG4810	utilization protein
AM455_RS05235	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM455_RS05255	COG2837	iron assimilation
AM455_RS05265	COG4150	thiosulfate binding
AM455_RS05270	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AM455_RS05275	COG4208	sulfate ABC transporter
AM455_RS05280	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AM455_RS05290	COG4319	ketosteroid isomerase
AM455_RS05325	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM455_RS05345	COG3530	Putative quorum-sensing-regulated virulence factor
AM455_RS05350	COG0385	Bile acid
AM455_RS05355	COG0583	DNA-binding transcription factor activity
AM455_RS05390	COG3415	Transposase
AM455_RS05395	COG3415	Transposase
AM455_RS05410	COG2200	EAL domain
AM455_RS05410	COG2199	diguanylate cyclase activity
AM455_RS05415	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM455_RS05430	COG0667	Aldo Keto reductase
AM455_RS05435	COG3961	Belongs to the TPP enzyme family
AM455_RS05450	COG3279	Response regulator of the LytR AlgR family
AM455_RS05455	COG3275	phosphorelay sensor kinase activity
AM455_RS05465	COG0436	Aminotransferase
AM455_RS05475	COG2807	transmembrane transport
AM455_RS05480	COG0590	tRNA wobble adenosine to inosine editing
AM455_RS05485	COG0583	DNA-binding transcription factor activity
AM455_RS05505	COG2116	formate transmembrane transporter activity
AM455_RS05510	COG2853	Lipoprotein
AM455_RS05520	COG3691	Protein conserved in bacteria
AM455_RS05535	COG2062	phosphohistidine phosphatase, SixA
AM455_RS05560	COG0730	response to heat
AM455_RS05565	COG3101	peptidyl-lysine hydroxylation
AM455_RS05580	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM455_RS05600	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM455_RS05610	COG0586	Pfam SNARE associated Golgi protein
AM455_RS05620	COG0285	dihydrofolate synthase activity
AM455_RS05625	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AM455_RS05630	COG1286	toxin biosynthetic process
AM455_RS05635	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AM455_RS05640	COG3829	transcription factor binding
AM455_RS05650	COG0531	amino acid
AM455_RS05655	COG3457	Alanine racemase
AM455_RS05660	COG0833	amino acid
AM455_RS05665	COG0163	prenyltransferase activity
AM455_RS05685	COG4160	amino acid transport
AM455_RS05690	COG4598	ABC transporter
AM455_RS05700	COG1090	epimerase
AM455_RS05705	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM455_RS05710	COG0625	glutathione transferase activity
AM455_RS05715	COG0625	glutathione transferase activity
AM455_RS05720	COG0622	Phosphoesterase
AM455_RS05725	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AM455_RS05730	COG0857	belongs to the CobB CobQ family
AM455_RS05730	COG0280	phosphate acetyltransferase
AM455_RS05750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM455_RS05755	COG0471	metal ion transport
AM455_RS05755	COG0490	domain, Protein
AM455_RS05765	COG0436	Aminotransferase
AM455_RS05770	COG0583	DNA-binding transcription factor activity
AM455_RS05825	COG0839	Belongs to the complex I subunit 6 family
AM455_RS05835	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM455_RS05840	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM455_RS05855	COG2153	protein acetylation
AM455_RS05860	COG1169	isochorismate synthase
AM455_RS05885	COG0318	PFAM AMP-dependent synthetase and ligase
AM455_RS05895	COG5464	transposase or invertase
AM455_RS05910	COG1414	Transcriptional regulator
AM455_RS05920	COG2271	Major facilitator Superfamily
AM455_RS05930	COG0247	lactate metabolic process
AM455_RS05940	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM455_RS05945	COG2271	Major facilitator Superfamily
AM455_RS05950	COG0584	glycerophosphoryl diester phosphodiesterase
AM455_RS05960	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM455_RS05990	COG2205	protein histidine kinase activity
AM455_RS05990	COG0784	Response regulator, receiver
AM455_RS06000	COG0642	Histidine kinase
AM455_RS06000	COG2198	Histidine kinase
AM455_RS06015	COG2169	Transcriptional regulator
AM455_RS06015	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM455_RS06020	COG3145	DNA-N1-methyladenine dioxygenase activity
AM455_RS06025	COG4615	Cyclic peptide transporter
AM455_RS06030	COG2239	Acts as a magnesium transporter
AM455_RS06035	COG0659	secondary active sulfate transmembrane transporter activity
AM455_RS06050	COG0628	permease
AM455_RS06075	COG1349	DNA-binding transcription factor activity
AM455_RS06080	COG0494	nUDIX hydrolase
AM455_RS06100	COG1061	Type III restriction enzyme res subunit
AM455_RS06105	COG1187	pseudouridine synthase activity
AM455_RS06110	COG2814	Major facilitator Superfamily
AM455_RS06120	COG4172	Belongs to the ABC transporter superfamily
AM455_RS06125	COG4239	(ABC) transporter, permease
AM455_RS06130	COG4174	ABC transporter (Permease)
AM455_RS06135	COG4166	transmembrane transport
AM455_RS06140	COG2200	EAL domain
AM455_RS06145	COG0791	NLP P60 protein
AM455_RS06150	COG0671	phosphoesterase, PA-phosphatase related
AM455_RS06155	COG0523	cobalamin synthesis protein
AM455_RS06160	COG0246	Mannitol dehydrogenase
AM455_RS06165	COG1312	Catalyzes the dehydration of D-mannonate
AM455_RS06200	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS06200	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS06205	COG1105	Belongs to the carbohydrate kinase PfkB family
AM455_RS06210	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM455_RS06210	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM455_RS06210	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM455_RS06220	COG2855	membrane
AM455_RS06230	COG0583	DNA-binding transcription factor activity
AM455_RS06235	COG0833	amino acid
AM455_RS06245	COG4771	TonB-dependent receptor
AM455_RS06260	COG2311	Membrane
AM455_RS06275	COG1129	ABC transporter
AM455_RS06285	COG2949	membrane
AM455_RS06295	COG1346	cytolysis
AM455_RS06305	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM455_RS06310	COG3659	wide pore channel activity
AM455_RS06325	COG2723	6-phospho-beta-galactosidase activity
AM455_RS06335	COG1538	Outer membrane efflux protein
AM455_RS06340	COG0586	Pfam SNARE associated Golgi protein
AM455_RS06350	COG1686	Belongs to the peptidase S11 family
AM455_RS06360	COG0277	FAD linked oxidase domain protein
AM455_RS06365	COG1472	Belongs to the glycosyl hydrolase 3 family
AM455_RS06370	COG1732	Glycine betaine
AM455_RS06375	COG1174	glycine betaine transport
AM455_RS06380	COG1125	glycine betaine transport
AM455_RS06385	COG1174	glycine betaine transport
AM455_RS06395	COG3275	phosphorelay sensor kinase activity
AM455_RS06405	COG4807	Protein conserved in bacteria
AM455_RS06425	COG5455	response to cobalt ion
AM455_RS06430	COG0583	DNA-binding transcription factor activity
AM455_RS06435	COG2252	PERMEase
AM455_RS06445	COG0583	DNA-binding transcription factor activity
AM455_RS06535	COG0351	phosphomethylpyrimidine kinase
AM455_RS06540	COG1830	Aldolase
AM455_RS06575	COG1070	Carbohydrate kinase
AM455_RS06585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM455_RS06595	COG0747	negative chemotaxis
AM455_RS06600	COG0601	transmembrane transport
AM455_RS06605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM455_RS06610	COG0444	Belongs to the ABC transporter superfamily
AM455_RS06615	COG4608	Belongs to the ABC transporter superfamily
AM455_RS06625	COG0826	peptidase U32
AM455_RS06630	COG0745	RESPONSE REGULATOR receiver
AM455_RS06635	COG2205	protein histidine kinase activity
AM455_RS06660	COG1301	dicarboxylic acid transport
AM455_RS06675	COG5002	protein histidine kinase activity
AM455_RS06680	COG0443	Heat shock 70 kDa protein
AM455_RS06685	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AM455_RS06700	COG2982	Protein involved in outer membrane biogenesis
AM455_RS06705	COG1253	flavin adenine dinucleotide binding
AM455_RS06745	COG0463	Glycosyl transferase, family 2
AM455_RS06825	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM455_RS06835	COG0438	transferase activity, transferring glycosyl groups
AM455_RS06860	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AM455_RS06890	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM455_RS06895	COG0583	DNA-binding transcription factor activity
AM455_RS06905	COG0531	amino acid
AM455_RS06910	COG0640	Transcriptional regulator
AM455_RS06915	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AM455_RS06920	COG2925	Exonuclease
AM455_RS06935	COG1289	transmembrane transporter activity
AM455_RS06955	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AM455_RS06965	COG1942	4-Oxalocrotonate Tautomerase
AM455_RS06970	COG0583	DNA-binding transcription factor activity
AM455_RS06975	COG0095	Lipoate-protein ligase
AM455_RS06980	COG0477	Major facilitator Superfamily
AM455_RS06995	COG3300	MHYT domain
AM455_RS06995	COG5001	Diguanylate cyclase
AM455_RS07015	COG3615	Tellurite resistance protein tehB
AM455_RS07040	COG3706	GGDEF domain
AM455_RS07060	COG0534	Mate efflux family protein
AM455_RS07070	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AM455_RS07090	COG0604	alcohol dehydrogenase
AM455_RS07095	COG1309	transcriptional regulator
AM455_RS07100	COG0025	NhaP-type Na H and K H
AM455_RS07165	COG4227	nucleotidyltransferase activity
AM455_RS07200	COG3504	Conjugal transfer protein
AM455_RS07205	COG3736	Type IV secretory pathway, component VirB8
AM455_RS07225	COG3451	type IV secretory pathway VirB4
AM455_RS07245	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM455_RS07280	COG1566	PFAM secretion protein HlyD family protein
AM455_RS07285	COG2814	Major facilitator Superfamily
AM455_RS07290	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM455_RS07295	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM455_RS07300	COG1845	cytochrome c oxidase, subunit III
AM455_RS07305	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM455_RS07310	COG2207	Transcriptional regulator
AM455_RS07315	COG0582	viral genome integration into host DNA
AM455_RS07365	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM455_RS07380	COG1418	mRNA catabolic process
AM455_RS07385	COG0270	DNA (cytosine-5-)-methyltransferase activity
AM455_RS07390	COG3727	T/G mismatch-specific endonuclease activity
AM455_RS07395	COG0697	spore germination
AM455_RS07400	COG2354	Protein conserved in bacteria
AM455_RS07430	COG0366	Alpha amylase catalytic
AM455_RS07435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS07445	COG0765	amino acid transport
AM455_RS07450	COG1126	abc transporter atp-binding protein
AM455_RS07455	COG2197	response regulator
AM455_RS07465	COG2197	response regulator
AM455_RS07505	COG3318	Belongs to the UPF0149 family
AM455_RS07505	COG3012	SEC-C Motif Domain Protein
AM455_RS07510	COG0814	amino acid
AM455_RS07520	COG1528	Iron-storage protein
AM455_RS07535	COG0477	Major facilitator Superfamily
AM455_RS07545	COG2211	Major facilitator Superfamily
AM455_RS07555	COG1528	Iron-storage protein
AM455_RS07565	COG1879	ABC-type sugar transport system periplasmic component
AM455_RS07575	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS07600	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AM455_RS07610	COG3102	Protein conserved in bacteria
AM455_RS07630	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AM455_RS07635	COG1801	Protein of unknown function DUF72
AM455_RS07640	COG0582	viral genome integration into host DNA
AM455_RS07835	COG3772	lysozyme
AM455_RS07860	COG5410	chromosome segregation
AM455_RS07935	COG1196	nuclear chromosome segregation
AM455_RS07935	COG0739	heme binding
AM455_RS07935	COG0741	lytic transglycosylase activity
AM455_RS08015	COG1335	isochorismatase
AM455_RS08025	COG0494	nUDIX hydrolase
AM455_RS08050	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM455_RS08060	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AM455_RS08065	COG0739	heme binding
AM455_RS08070	COG1560	Kdo2-lipid A biosynthetic process
AM455_RS08080	COG1737	Transcriptional regulator
AM455_RS08095	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AM455_RS08100	COG0129	dihydroxy-acid dehydratase activity
AM455_RS08105	COG0800	Aldolase
AM455_RS08115	COG3141	response to X-ray
AM455_RS08120	COG2979	Protein of unknown function (DUF533)
AM455_RS08125	COG1770	oligopeptidase
AM455_RS08130	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM455_RS08140	COG2372	response to copper ion
AM455_RS08145	COG1276	copper resistance
AM455_RS08160	COG2990	Protein conserved in bacteria
AM455_RS08185	COG3008	intermembrane lipid transfer
AM455_RS08190	COG2995	paraquat-inducible protein a
AM455_RS08195	COG1956	GAF domain-containing protein
AM455_RS08215	COG2814	Major facilitator Superfamily
AM455_RS08225	COG1414	Transcriptional regulator
AM455_RS08265	COG0768	penicillin binding
AM455_RS08270	COG2226	methyltransferase
AM455_RS08285	COG3716	PTS system mannose fructose sorbose family IID component
AM455_RS08290	COG3715	PTS system
AM455_RS08295	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS08295	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS08300	COG1253	flavin adenine dinucleotide binding
AM455_RS08305	COG2200	EAL domain
AM455_RS08310	COG1760	l-serine dehydratase
AM455_RS08330	COG0251	oxidation-reduction process
AM455_RS08335	COG1199	ATP-dependent helicase activity
AM455_RS08345	COG3065	identical protein binding
AM455_RS08355	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AM455_RS08365	COG2894	cell division
AM455_RS08380	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM455_RS08410	COG2719	SpoVR family
AM455_RS08430	COG1619	proteins homologs of microcin C7 resistance protein MccF
AM455_RS08440	COG4774	siderophore transport
AM455_RS08455	COG2308	Evidence 4 Homologs of previously reported genes of
AM455_RS08495	COG0583	DNA-binding transcription factor activity
AM455_RS08500	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM455_RS08515	COG1882	Formate acetyltransferase
AM455_RS08545	COG0583	DNA-binding transcription factor activity
AM455_RS08575	COG0583	DNA-binding transcription factor activity
AM455_RS08590	COG3122	Protein conserved in bacteria
AM455_RS08615	COG2885	chlorophyll binding
AM455_RS08645	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AM455_RS08710	COG0012	GTP binding
AM455_RS08730	COG0659	secondary active sulfate transmembrane transporter activity
AM455_RS08765	COG2890	protein-(glutamine-N5) methyltransferase activity
AM455_RS08785	COG0387	Pfam Sodium calcium exchanger
AM455_RS08790	COG4572	Cation transport regulator
AM455_RS08795	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM455_RS08805	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AM455_RS08810	COG3707	response regulator
AM455_RS08815	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM455_RS08825	COG1116	anion transmembrane transporter activity
AM455_RS08830	COG2146	nitrite reductase [NAD(P)H] activity
AM455_RS08830	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM455_RS08835	COG0243	molybdopterin cofactor binding
AM455_RS08840	COG4932	domain protein
AM455_RS08845	COG2197	response regulator
AM455_RS08850	COG3850	Histidine kinase
AM455_RS08855	COG2223	nitrite transmembrane transporter activity
AM455_RS08860	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM455_RS08865	COG1140	nitrate reductase beta subunit
AM455_RS08870	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM455_RS08875	COG2181	nitrate reductase activity
AM455_RS08885	COG1522	sequence-specific DNA binding
AM455_RS08915	COG0788	formyltetrahydrofolate deformylase activity
AM455_RS08925	COG1752	Esterase of the alpha-beta hydrolase superfamily
AM455_RS08930	COG0745	RESPONSE REGULATOR receiver
AM455_RS08935	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM455_RS08940	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM455_RS08945	COG1435	thymidine kinase activity
AM455_RS08950	COG1454	alcohol dehydrogenase
AM455_RS08950	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS08960	COG2095	MarC family integral membrane protein
AM455_RS08965	COG4166	transmembrane transport
AM455_RS08970	COG0601	transmembrane transport
AM455_RS08975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM455_RS08980	COG0444	Belongs to the ABC transporter superfamily
AM455_RS08990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM455_RS09010	COG2353	YceI-like domain
AM455_RS09015	COG2350	Protein conserved in bacteria
AM455_RS09025	COG3001	Fructosamine kinase
AM455_RS09035	COG1105	Belongs to the carbohydrate kinase PfkB family
AM455_RS09040	COG3137	Salt-induced outer membrane protein
AM455_RS09080	COG0072	phenylalanine-tRNA ligase activity
AM455_RS09080	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM455_RS09100	COG0583	DNA-binding transcription factor activity
AM455_RS09120	COG0386	Belongs to the glutathione peroxidase family
AM455_RS09130	COG0791	NLP P60 protein
AM455_RS09140	COG4256	Hemin uptake protein
AM455_RS09145	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM455_RS09155	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM455_RS09155	COG0574	Belongs to the PEP-utilizing enzyme family
AM455_RS09165	COG0628	permease
AM455_RS09170	COG0247	lactate metabolic process
AM455_RS09170	COG0277	FAD linked oxidase domain protein
AM455_RS09175	COG2050	protein possibly involved in aromatic compounds catabolism
AM455_RS09180	COG2261	transglycosylase associated protein
AM455_RS09210	COG1120	ATPase activity
AM455_RS09215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS09225	COG0583	DNA-binding transcription factor activity
AM455_RS09250	COG1304	FMN binding
AM455_RS09255	COG1309	transcriptional regulator
AM455_RS09270	COG0316	Belongs to the HesB IscA family
AM455_RS09275	COG0719	Fe-S assembly protein
AM455_RS09280	COG0396	ATPase activity
AM455_RS09285	COG0719	Fe-S assembly protein
AM455_RS09300	COG1376	ErfK ybiS ycfS ynhG family protein
AM455_RS09325	COG1309	transcriptional regulator
AM455_RS09330	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AM455_RS09330	COG1082	Xylose isomerase domain protein TIM barrel
AM455_RS09335	COG2271	Major facilitator Superfamily
AM455_RS09340	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM455_RS09350	COG1120	ATPase activity
AM455_RS09355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS09360	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM455_RS09365	COG1414	Transcriptional regulator
AM455_RS09400	COG2814	Major facilitator Superfamily
AM455_RS09420	COG0583	DNA-binding transcription factor activity
AM455_RS09425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS09445	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM455_RS09450	COG1116	anion transmembrane transporter activity
AM455_RS09455	COG4774	siderophore transport
AM455_RS09460	COG1120	ATPase activity
AM455_RS09465	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS09470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS09490	COG0765	amino acid transport
AM455_RS09495	COG1126	abc transporter atp-binding protein
AM455_RS09525	COG1473	amidohydrolase
AM455_RS09530	COG3383	formate dehydrogenase (NAD+) activity
AM455_RS09535	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM455_RS09550	COG1175	transmembrane transport
AM455_RS09580	COG4133	protoheme IX ABC transporter activity
AM455_RS09585	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM455_RS09590	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM455_RS09605	COG1138	Cytochrome C-type biogenesis protein
AM455_RS09610	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM455_RS09615	COG4235	cytochrome complex assembly
AM455_RS09615	COG3088	subunit of a heme lyase
AM455_RS09690	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS09695	COG2610	gluconate transmembrane transporter activity
AM455_RS09700	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM455_RS09710	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM455_RS09720	COG0583	DNA-binding transcription factor activity
AM455_RS09740	COG0277	FAD linked oxidase domain protein
AM455_RS09745	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM455_RS09770	COG0402	S-adenosylhomocysteine deaminase activity
AM455_RS09830	COG4608	Belongs to the ABC transporter superfamily
AM455_RS09835	COG0444	Belongs to the ABC transporter superfamily
AM455_RS09860	COG0346	lactoylglutathione lyase activity
AM455_RS09865	COG1349	DNA-binding transcription factor activity
AM455_RS09895	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AM455_RS09950	COG0307	riboflavin synthase, alpha
AM455_RS09955	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM455_RS09960	COG2814	Major facilitator Superfamily
AM455_RS09965	COG0583	DNA-binding transcription factor activity
AM455_RS09980	COG2814	Major facilitator Superfamily
AM455_RS09995	COG0791	NLP P60 protein
AM455_RS10000	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AM455_RS10010	COG0346	lactoylglutathione lyase activity
AM455_RS10015	COG1902	pentaerythritol trinitrate reductase activity
AM455_RS10020	COG1309	transcriptional regulator
AM455_RS10025	COG3313	Fe-S protein
AM455_RS10030	COG4989	oxidoreductase activity
AM455_RS10035	COG2032	superoxide dismutase activity
AM455_RS10040	COG1289	transmembrane transporter activity
AM455_RS10045	COG1566	PFAM secretion protein HlyD family protein
AM455_RS10060	COG3706	GGDEF domain
AM455_RS10075	COG3895	Periplasmic Protein
AM455_RS10090	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AM455_RS10095	COG0625	glutathione transferase activity
AM455_RS10110	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM455_RS10120	COG4659	FMN binding
AM455_RS10155	COG2723	6-phospho-beta-galactosidase activity
AM455_RS10165	COG0673	inositol 2-dehydrogenase activity
AM455_RS10175	COG2814	Major facilitator Superfamily
AM455_RS10195	COG3038	cytochrome b561
AM455_RS10215	COG0583	DNA-binding transcription factor activity
AM455_RS10220	COG3485	protocatechuate 3,4-dioxygenase
AM455_RS10225	COG3485	protocatechuate 3,4-dioxygenase
AM455_RS10230	COG5383	Protein conserved in bacteria
AM455_RS10235	COG2272	Belongs to the type-B carboxylesterase lipase family
AM455_RS10250	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM455_RS10255	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM455_RS10260	COG1275	C4-dicarboxylate transporter malic acid transport protein
AM455_RS10265	COG0500	methyltransferase
AM455_RS10280	COG2207	Transcriptional regulator
AM455_RS10280	COG3708	Transcriptional regulator
AM455_RS10285	COG3135	benzoate transporter
AM455_RS10290	COG1396	sequence-specific DNA binding
AM455_RS10300	COG0826	peptidase U32
AM455_RS10320	COG1294	oxidase, subunit
AM455_RS10325	COG1271	oxidase subunit
AM455_RS10330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM455_RS10335	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM455_RS10340	COG3842	ATPase activity
AM455_RS10345	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM455_RS10350	COG1177	transmembrane transport
AM455_RS10355	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS10385	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS10390	COG0747	negative chemotaxis
AM455_RS10400	COG3238	Protein conserved in bacteria
AM455_RS10405	COG1247	-acetyltransferase
AM455_RS10415	COG2130	NADP-dependent
AM455_RS10430	COG3691	Protein conserved in bacteria
AM455_RS10435	COG1228	amidohydrolase
AM455_RS10440	COG4772	TonB-dependent receptor
AM455_RS10465	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AM455_RS10470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS10475	COG1473	amidohydrolase
AM455_RS10480	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS10485	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS10495	COG0765	amino acid transport
AM455_RS10500	COG1126	abc transporter atp-binding protein
AM455_RS10510	COG2271	Major facilitator Superfamily
AM455_RS10520	COG1609	Transcriptional regulator
AM455_RS10525	COG0625	glutathione transferase activity
AM455_RS10540	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM455_RS10545	COG3842	ATPase activity
AM455_RS10550	COG1840	ABC-type Fe3 transport system, periplasmic component
AM455_RS10555	COG1178	ABC-type Fe3 transport system permease component
AM455_RS10560	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AM455_RS10565	COG2181	nitrate reductase activity
AM455_RS10570	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM455_RS10575	COG1140	nitrate reductase beta subunit
AM455_RS10580	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM455_RS10600	COG1414	Transcriptional regulator
AM455_RS10605	COG4948	Mandelate Racemase Muconate Lactonizing
AM455_RS10610	COG4829	muconolactone delta-isomerase
AM455_RS10615	COG3485	protocatechuate 3,4-dioxygenase
AM455_RS10625	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AM455_RS10645	COG0243	molybdopterin cofactor binding
AM455_RS10645	COG3383	formate dehydrogenase (NAD+) activity
AM455_RS10650	COG0243	molybdopterin cofactor binding
AM455_RS10650	COG3383	formate dehydrogenase (NAD+) activity
AM455_RS10655	COG0437	4 iron, 4 sulfur cluster binding
AM455_RS10660	COG2864	formate dehydrogenase
AM455_RS10675	COG2326	polyphosphate kinase activity
AM455_RS10685	COG2814	Major facilitator Superfamily
AM455_RS10695	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS10705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM455_RS10715	COG0747	negative chemotaxis
AM455_RS10720	COG1064	alcohol dehydrogenase
AM455_RS10735	COG0488	(ABC) transporter
AM455_RS10785	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS10790	COG3729	General stress protein
AM455_RS10810	COG3685	Protein conserved in bacteria
AM455_RS10830	COG2323	membrane
AM455_RS10840	COG3111	PFAM Bacterial OB fold (BOF) protein
AM455_RS10845	COG1764	response to oxidative stress
AM455_RS10870	COG3781	membrane
AM455_RS10875	COG0243	molybdopterin cofactor binding
AM455_RS10880	COG0583	DNA-binding transcription factor activity
AM455_RS10885	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM455_RS10890	COG2814	Major facilitator Superfamily
AM455_RS10900	COG1285	pathogenesis
AM455_RS10905	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM455_RS10915	COG0583	DNA-binding transcription factor activity
AM455_RS10935	COG0519	Catalyzes the synthesis of GMP from XMP
AM455_RS10935	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AM455_RS10975	COG0596	Alpha beta hydrolase
AM455_RS10985	COG2205	protein histidine kinase activity
AM455_RS11000	COG0076	glutamate decarboxylase activity
AM455_RS11005	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM455_RS11010	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM455_RS11015	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM455_RS11020	COG1116	anion transmembrane transporter activity
AM455_RS11025	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AM455_RS11040	COG0673	inositol 2-dehydrogenase activity
AM455_RS11050	COG1609	Transcriptional regulator
AM455_RS11055	COG3706	GGDEF domain
AM455_RS11060	COG0402	S-adenosylhomocysteine deaminase activity
AM455_RS11065	COG1953	Uracil, thiamine, allantoin
AM455_RS11100	COG0406	alpha-ribazole phosphatase activity
AM455_RS11110	COG1335	isochorismatase
AM455_RS11135	COG2207	Transcriptional regulator
AM455_RS11160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM455_RS11225	COG0765	amino acid transport
AM455_RS11235	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AM455_RS11250	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AM455_RS11255	COG0583	DNA-binding transcription factor activity
AM455_RS11265	COG1902	pentaerythritol trinitrate reductase activity
AM455_RS11305	COG1902	pentaerythritol trinitrate reductase activity
AM455_RS11310	COG4529	Protein conserved in bacteria
AM455_RS11315	COG0477	Major facilitator Superfamily
AM455_RS11345	COG2223	nitrite transmembrane transporter activity
AM455_RS11395	COG4977	sequence-specific DNA binding
AM455_RS11415	COG4977	sequence-specific DNA binding
AM455_RS11420	COG1349	DNA-binding transcription factor activity
AM455_RS11440	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM455_RS11445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS11450	COG0738	Major facilitator superfamily
AM455_RS11495	COG1929	Belongs to the glycerate kinase type-1 family
AM455_RS11500	COG3835	regulator
AM455_RS11520	COG2186	Transcriptional regulator
AM455_RS11525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS11525	COG1263	PTS System
AM455_RS11535	COG2814	Major facilitator Superfamily
AM455_RS11540	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS11540	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS11550	COG2819	hydrolase of the alpha beta superfamily
AM455_RS11555	COG5001	Diguanylate cyclase
AM455_RS11555	COG3300	MHYT domain
AM455_RS11605	COG1649	PFAM Uncharacterised BCR, COG1649
AM455_RS11610	COG3550	peptidyl-serine autophosphorylation
AM455_RS11615	COG1396	sequence-specific DNA binding
AM455_RS11620	COG2351	hydroxyisourate hydrolase activity
AM455_RS11625	COG3195	allantoin biosynthetic process
AM455_RS11625	COG3648	Uricase
AM455_RS11630	COG2233	PERMEase
AM455_RS11660	COG2207	Transcriptional regulator
AM455_RS11675	COG4628	conserved protein (DUF2132)
AM455_RS11695	COG2011	ABC-type metal ion transport system permease component
AM455_RS11700	COG2070	2-Nitropropane dioxygenase
AM455_RS11710	COG0477	Major facilitator Superfamily
AM455_RS11765	COG2199	diguanylate cyclase activity
AM455_RS11780	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS11785	COG0583	DNA-binding transcription factor activity
AM455_RS11795	COG0039	L-malate dehydrogenase activity
AM455_RS11800	COG1349	DNA-binding transcription factor activity
AM455_RS11805	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AM455_RS11810	COG3395	kinase activity
AM455_RS11820	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AM455_RS11835	COG2731	YhcH YjgK YiaL family protein
AM455_RS11840	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS11865	COG4977	sequence-specific DNA binding
AM455_RS11875	COG0697	spore germination
AM455_RS11880	COG2814	Major facilitator Superfamily
AM455_RS11890	COG0410	ABC transporter
AM455_RS11895	COG1129	ABC transporter
AM455_RS11910	COG0683	leucine binding
AM455_RS11915	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AM455_RS11950	COG2223	nitrite transmembrane transporter activity
AM455_RS11955	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AM455_RS11970	COG1349	DNA-binding transcription factor activity
AM455_RS11975	COG2084	Dehydrogenase
AM455_RS11980	COG3395	kinase activity
AM455_RS11985	COG0235	Class ii aldolase
AM455_RS11990	COG3622	Belongs to the hyi family
AM455_RS11995	COG2610	gluconate transmembrane transporter activity
AM455_RS12000	COG3708	Transcriptional regulator
AM455_RS12000	COG2207	Transcriptional regulator
AM455_RS12010	COG2200	EAL domain
AM455_RS12015	COG1546	Belongs to the CinA family
AM455_RS12020	COG0071	Belongs to the small heat shock protein (HSP20) family
AM455_RS12035	COG2135	peptidase activity
AM455_RS12040	COG2207	Transcriptional regulator
AM455_RS12055	COG4221	oxidoreductase activity
AM455_RS12060	COG1802	Transcriptional regulator
AM455_RS12065	COG0589	response to stress
AM455_RS12070	COG0246	Mannitol dehydrogenase
AM455_RS12075	COG2271	Major facilitator Superfamily
AM455_RS12090	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM455_RS12105	COG0243	molybdopterin cofactor binding
AM455_RS12110	COG0437	4 iron, 4 sulfur cluster binding
AM455_RS12115	COG3302	dmso reductase anchor subunit
AM455_RS12130	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM455_RS12135	COG1940	carbohydrate kinase activity
AM455_RS12140	COG0583	DNA-binding transcription factor activity
AM455_RS12145	COG2814	Major facilitator Superfamily
AM455_RS12150	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AM455_RS12160	COG3591	Belongs to the peptidase S1B family
AM455_RS12180	COG0628	permease
AM455_RS12210	COG0679	Auxin Efflux Carrier
AM455_RS12220	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM455_RS12260	COG3290	protein histidine kinase activity
AM455_RS12265	COG4565	transcriptional regulatory protein
AM455_RS12290	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM455_RS12290	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM455_RS12300	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM455_RS12305	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AM455_RS12315	COG0183	Belongs to the thiolase family
AM455_RS12320	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM455_RS12330	COG1414	Transcriptional regulator
AM455_RS12335	COG2840	Smr protein MutS2
AM455_RS12340	COG0583	DNA-binding transcription factor activity
AM455_RS12350	COG1473	amidohydrolase
AM455_RS12355	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AM455_RS12370	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM455_RS12385	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AM455_RS12390	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AM455_RS12410	COG0531	amino acid
AM455_RS12420	COG3136	membrane protein required for alginate biosynthesis
AM455_RS12425	COG0745	RESPONSE REGULATOR receiver
AM455_RS12435	COG2205	protein histidine kinase activity
AM455_RS12445	COG0114	fumarate hydratase activity
AM455_RS12450	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM455_RS12450	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM455_RS12455	COG1482	cell wall glycoprotein biosynthetic process
AM455_RS12460	COG5339	Protein conserved in bacteria
AM455_RS12465	COG1609	Transcriptional regulator
AM455_RS12470	COG1263	PTS System
AM455_RS12470	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS12475	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM455_RS12500	COG2391	methyltransferase activity
AM455_RS12505	COG0425	Belongs to the sulfur carrier protein TusA family
AM455_RS12510	COG5562	phage envelope protein
AM455_RS12515	COG0401	homolog of Blt101
AM455_RS12520	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM455_RS12525	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS12530	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM455_RS12535	COG0477	Major facilitator Superfamily
AM455_RS12540	COG1113	amino acid transport
AM455_RS12545	COG2988	succinylglutamate desuccinylase activity
AM455_RS12550	COG3724	N-succinylarginine dihydrolase activity
AM455_RS12555	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS12560	COG3138	arginine N-succinyltransferase
AM455_RS12565	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM455_RS12570	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM455_RS12575	COG0667	Aldo Keto reductase
AM455_RS12580	COG0583	DNA-binding transcription factor activity
AM455_RS12605	COG4122	O-methyltransferase activity
AM455_RS12610	COG1643	Atp-dependent helicase
AM455_RS12625	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM455_RS12630	COG3327	negative regulation of DNA-templated transcription, initiation
AM455_RS12635	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AM455_RS12640	COG0183	Belongs to the thiolase family
AM455_RS12645	COG2050	protein possibly involved in aromatic compounds catabolism
AM455_RS12650	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM455_RS12655	COG1024	Enoyl-CoA hydratase
AM455_RS12660	COG1024	Enoyl-CoA hydratase
AM455_RS12665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM455_RS12670	COG2151	metal-sulfur cluster biosynthetic enzyme
AM455_RS12675	COG3396	Phenylacetate-CoA oxygenase
AM455_RS12680	COG3460	Phenylacetate-CoA oxygenase
AM455_RS12685	COG3396	Phenylacetate-CoA oxygenase
AM455_RS12690	COG2030	dehydratase
AM455_RS12690	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS12720	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS12725	COG2207	Transcriptional regulator
AM455_RS12730	COG3784	Protein of unknown function (DUF1318)
AM455_RS12740	COG2911	Protein conserved in bacteria
AM455_RS12745	COG0586	Pfam SNARE associated Golgi protein
AM455_RS12750	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AM455_RS12755	COG3187	Heat shock protein
AM455_RS12760	COG3042	response to heat
AM455_RS12770	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AM455_RS12770	COG1013	pyruvate-flavodoxin oxidoreductase activity
AM455_RS12770	COG0674	pyruvate-flavodoxin oxidoreductase activity
AM455_RS12770	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM455_RS12775	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM455_RS12795	COG0589	response to stress
AM455_RS12805	COG0513	Belongs to the DEAD box helicase family
AM455_RS12825	COG1349	DNA-binding transcription factor activity
AM455_RS12830	COG0673	inositol 2-dehydrogenase activity
AM455_RS12845	COG1113	amino acid transport
AM455_RS12850	COG1522	sequence-specific DNA binding
AM455_RS12860	COG1448	Aminotransferase
AM455_RS12865	COG2011	ABC-type metal ion transport system permease component
AM455_RS12920	COG2885	chlorophyll binding
AM455_RS12945	COG0693	protein deglycase activity
AM455_RS12950	COG1078	dGTPase activity
AM455_RS12955	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS12960	COG0583	DNA-binding transcription factor activity
AM455_RS12980	COG0656	L-ascorbic acid biosynthetic process
AM455_RS13010	COG4166	transmembrane transport
AM455_RS13015	COG2866	Carboxypeptidase
AM455_RS13020	COG4948	Mandelate Racemase Muconate Lactonizing
AM455_RS13025	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AM455_RS13030	COG3180	Ammonia monooxygenase
AM455_RS13040	COG1486	melibiose metabolic process
AM455_RS13045	COG0583	DNA-binding transcription factor activity
AM455_RS13055	COG3106	COG3106 Predicted ATPase
AM455_RS13065	COG1983	PspC domain protein
AM455_RS13075	COG1842	Phage shock protein A
AM455_RS13080	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM455_RS13090	COG1473	amidohydrolase
AM455_RS13105	COG0702	epimerase
AM455_RS13120	COG2135	peptidase activity
AM455_RS13130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM455_RS13135	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM455_RS13190	COG5484	DNA packaging
AM455_RS13190	COG3728	DNA packaging
AM455_RS13240	COG0484	heat shock protein binding
AM455_RS13245	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
AM455_RS13305	COG1484	DNA-dependent DNA replication
AM455_RS13360	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM455_RS13395	COG4171	peptide transport system, permease
AM455_RS13410	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM455_RS13420	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AM455_RS13425	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM455_RS13425	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM455_RS13440	COG1349	DNA-binding transcription factor activity
AM455_RS13450	COG0023	Translation Initiation Factor
AM455_RS13460	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AM455_RS13465	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AM455_RS13470	COG0671	phosphoesterase, PA-phosphatase related
AM455_RS13480	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM455_RS13510	COG0616	signal peptide processing
AM455_RS13520	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS13525	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
AM455_RS13590	COG0583	DNA-binding transcription factor activity
AM455_RS13600	COG0009	L-threonylcarbamoyladenylate synthase
AM455_RS13610	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM455_RS13615	COG0512	Glutamine amidotransferase of anthranilate synthase
AM455_RS13615	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM455_RS13620	COG0135	phosphoribosylanthranilate isomerase activity
AM455_RS13620	COG0134	indole-3-glycerol-phosphate synthase activity
AM455_RS13655	COG4774	siderophore transport
AM455_RS13665	COG3047	cAMP biosynthetic process
AM455_RS13670	COG0727	PFAM Uncharacterised protein family (UPF0153)
AM455_RS13700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM455_RS13705	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS13710	COG1988	membrane-bound metal-dependent
AM455_RS13715	COG1823	symporter activity
AM455_RS13725	COG0753	catalase activity
AM455_RS13735	COG1486	melibiose metabolic process
AM455_RS13740	COG1917	Cupin 2, conserved barrel domain protein
AM455_RS13740	COG2169	Transcriptional regulator
AM455_RS13745	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM455_RS13750	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS13755	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS13760	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM455_RS13770	COG0322	excinuclease ABC activity
AM455_RS13775	COG3678	ATP-independent chaperone mediated protein folding
AM455_RS13785	COG3724	N-succinylarginine dihydrolase activity
AM455_RS13795	COG3138	arginine N-succinyltransferase
AM455_RS13805	COG0708	Exodeoxyribonuclease III
AM455_RS13810	COG0398	Pfam SNARE associated Golgi protein
AM455_RS13815	COG0398	Pfam SNARE associated Golgi protein
AM455_RS13820	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM455_RS13825	COG4134	Bacterial extracellular solute-binding protein
AM455_RS13830	COG4135	transport system, permease component
AM455_RS13835	COG4136	ATPase activity
AM455_RS13840	COG2897	thiosulfate sulfurtransferase activity
AM455_RS13845	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM455_RS13850	COG0494	nUDIX hydrolase
AM455_RS13855	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM455_RS13860	COG3321	synthase
AM455_RS13860	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS13860	COG0604	alcohol dehydrogenase
AM455_RS13865	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM455_RS13870	COG0709	Synthesizes selenophosphate from selenide and ATP
AM455_RS13885	COG0778	Nitroreductase
AM455_RS13890	COG0616	signal peptide processing
AM455_RS13895	COG0252	asparaginase activity
AM455_RS13915	COG3139	Protein of unknown function (DUF1315)
AM455_RS13935	COG0656	L-ascorbic acid biosynthetic process
AM455_RS13940	COG3713	MltA-interacting MipA family protein
AM455_RS13945	COG2766	serine protein kinase
AM455_RS13960	COG0386	Belongs to the glutathione peroxidase family
AM455_RS13980	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS13985	COG0583	DNA-binding transcription factor activity
AM455_RS13990	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM455_RS13995	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM455_RS14005	COG0859	PFAM glycosyl transferase family 9
AM455_RS14010	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM455_RS14020	COG2207	Transcriptional regulator
AM455_RS14025	COG2807	transmembrane transport
AM455_RS14030	COG0504	CTP synthase activity
AM455_RS14035	COG1683	Conserved Protein
AM455_RS14040	COG3189	MarR family transcriptional regulator
AM455_RS14045	COG3042	response to heat
AM455_RS14050	COG2203	Gaf domain
AM455_RS14050	COG2199	diguanylate cyclase activity
AM455_RS14070	COG3182	Iron-regulated membrane protein
AM455_RS14080	COG1560	Kdo2-lipid A biosynthetic process
AM455_RS14095	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AM455_RS14100	COG3706	GGDEF domain
AM455_RS14105	COG0583	DNA-binding transcription factor activity
AM455_RS14110	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM455_RS14135	COG1294	oxidase, subunit
AM455_RS14140	COG1271	oxidase subunit
AM455_RS14145	COG3546	catalase activity
AM455_RS14150	COG3685	Protein conserved in bacteria
AM455_RS14155	COG3685	Protein conserved in bacteria
AM455_RS14160	COG3729	General stress protein
AM455_RS14165	COG1063	alcohol dehydrogenase
AM455_RS14170	COG3813	Protein conserved in bacteria
AM455_RS14190	COG0640	Transcriptional regulator
AM455_RS14195	COG0538	isocitrate dehydrogenase activity
AM455_RS14205	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM455_RS14220	COG0582	viral genome integration into host DNA
AM455_RS14225	COG0538	isocitrate dehydrogenase activity
AM455_RS14230	COG1187	pseudouridine synthase activity
AM455_RS14250	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM455_RS14270	COG2205	protein histidine kinase activity
AM455_RS14275	COG2850	peptidyl-arginine hydroxylation
AM455_RS14280	COG1943	Transposase
AM455_RS14300	COG1177	transmembrane transport
AM455_RS14315	COG0318	PFAM AMP-dependent synthetase and ligase
AM455_RS14325	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AM455_RS14335	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM455_RS14345	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM455_RS14350	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AM455_RS14355	COG1376	ErfK ybiS ycfS ynhG family protein
AM455_RS14355	COG1388	LysM domain
AM455_RS14365	COG1309	transcriptional regulator
AM455_RS14375	COG3134	Outer membrane lipoprotein
AM455_RS14380	COG1252	NADH dehydrogenase
AM455_RS14405	COG5633	Lipoprotein
AM455_RS14410	COG0537	adenosine 5'-monophosphoramidase activity
AM455_RS14420	COG0084	hydrolase, TatD family'
AM455_RS14425	COG0470	DNA polymerase III
AM455_RS14435	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AM455_RS14440	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM455_RS14445	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM455_RS14460	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM455_RS14480	COG1399	metal-binding, possibly nucleic acid-binding protein
AM455_RS14500	COG1530	ribonuclease E activity
AM455_RS14505	COG0583	DNA-binding transcription factor activity
AM455_RS14510	COG2814	Major facilitator Superfamily
AM455_RS14530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM455_RS14580	COG1560	Kdo2-lipid A biosynthetic process
AM455_RS14600	COG5645	(Lipo)protein
AM455_RS14640	COG3381	protein complex oligomerization
AM455_RS14665	COG0583	DNA-binding transcription factor activity
AM455_RS14675	COG1335	isochorismatase
AM455_RS14685	COG1702	phosphate starvation-inducible protein PhoH
AM455_RS14705	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM455_RS14715	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM455_RS14735	COG1309	transcriptional regulator
AM455_RS14770	COG2233	PERMEase
AM455_RS14780	COG3729	General stress protein
AM455_RS14805	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS14820	COG0531	amino acid
AM455_RS14830	COG0174	glutamine synthetase
AM455_RS14835	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AM455_RS14840	COG1917	Cupin 2, conserved barrel domain protein
AM455_RS14840	COG1396	sequence-specific DNA binding
AM455_RS14845	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS14850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM455_RS14855	COG0583	DNA-binding transcription factor activity
AM455_RS14860	COG0473	3-isopropylmalate dehydrogenase activity
AM455_RS14870	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM455_RS14875	COG4638	Rieske (2fe-2S)
AM455_RS14880	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS14885	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM455_RS14895	COG2200	EAL domain
AM455_RS14900	COG2200	EAL domain
AM455_RS14915	COG0670	Belongs to the BI1 family
AM455_RS14930	COG2207	Transcriptional regulator
AM455_RS14935	COG1881	PFAM PEBP family protein
AM455_RS14950	COG1832	CoA-binding protein
AM455_RS14960	COG0210	DNA helicase
AM455_RS14965	COG3304	Inner membrane component domain
AM455_RS14970	COG1289	transmembrane transporter activity
AM455_RS14975	COG3070	regulator of competence-specific genes
AM455_RS15000	COG1067	ATP-dependent peptidase activity
AM455_RS15010	COG3130	regulation of translation
AM455_RS15020	COG3009	Protein conserved in bacteria
AM455_RS15025	COG3008	intermembrane lipid transfer
AM455_RS15025	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM455_RS15030	COG2995	paraquat-inducible protein a
AM455_RS15035	COG0488	(ABC) transporter
AM455_RS15045	COG3217	Mosc domain protein beta barrel domain protein
AM455_RS15045	COG0633	Ferredoxin
AM455_RS15060	COG0431	NADPH-dependent FMN reductase
AM455_RS15065	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM455_RS15070	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM455_RS15075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM455_RS15085	COG0308	aminopeptidase N
AM455_RS15120	COG0814	amino acid
AM455_RS15130	COG1522	sequence-specific DNA binding
AM455_RS15140	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM455_RS15145	COG1448	Aminotransferase
AM455_RS15150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM455_RS15155	COG3108	Peptidase M15
AM455_RS15165	COG2989	Protein conserved in bacteria
AM455_RS15175	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AM455_RS15185	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM455_RS15190	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM455_RS15195	COG3173	Aminoglycoside phosphotransferase
AM455_RS15210	COG3214	Protein conserved in bacteria
AM455_RS15225	COG2333	competence protein COMEC
AM455_RS15225	COG0658	competence protein
AM455_RS15235	COG0539	negative regulation of cytoplasmic translation
AM455_RS15255	COG2323	membrane
AM455_RS15260	COG1944	ATP diphosphatase activity
AM455_RS15265	COG2116	formate transmembrane transporter activity
AM455_RS15270	COG1882	Formate acetyltransferase
AM455_RS15275	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM455_RS15280	COG0477	Major facilitator Superfamily
AM455_RS15290	COG3302	dmso reductase anchor subunit
AM455_RS15295	COG0437	4 iron, 4 sulfur cluster binding
AM455_RS15300	COG0243	molybdopterin cofactor binding
AM455_RS15310	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AM455_RS15320	COG1674	ftsk spoiiie
AM455_RS15320	COG1178	ABC-type Fe3 transport system permease component
AM455_RS15330	COG0492	ferredoxin-NADP+ reductase activity
AM455_RS15335	COG4988	ABC transporter
AM455_RS15340	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AM455_RS15355	COG0542	response to heat
AM455_RS15365	COG1278	Cold shock
AM455_RS15380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS15385	COG3593	DNA synthesis involved in DNA repair
AM455_RS15395	COG2431	L-lysine efflux transmembrane transporter activity
AM455_RS15405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM455_RS15415	COG0028	Belongs to the TPP enzyme family
AM455_RS15420	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AM455_RS15425	COG0702	epimerase
AM455_RS15430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM455_RS15435	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM455_RS15440	COG2203	Gaf domain
AM455_RS15440	COG4251	negative regulation of phosphorylation
AM455_RS15440	COG3706	GGDEF domain
AM455_RS15440	COG5001	Diguanylate cyclase
AM455_RS15455	COG1126	abc transporter atp-binding protein
AM455_RS15460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS15465	COG4215	(ABC) transporter
AM455_RS15470	COG4160	amino acid transport
AM455_RS15475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS15480	COG5002	protein histidine kinase activity
AM455_RS15485	COG0745	RESPONSE REGULATOR receiver
AM455_RS15500	COG1177	transmembrane transport
AM455_RS15505	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM455_RS15510	COG3842	ATPase activity
AM455_RS15515	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM455_RS15530	COG0778	Nitroreductase
AM455_RS15555	COG3226	Transcriptional regulator
AM455_RS15560	COG0738	Major facilitator superfamily
AM455_RS15565	COG0561	phosphatase activity
AM455_RS15570	COG2814	Major facilitator Superfamily
AM455_RS15580	COG0671	phosphoesterase, PA-phosphatase related
AM455_RS15585	COG1349	DNA-binding transcription factor activity
AM455_RS15590	COG1686	Belongs to the peptidase S11 family
AM455_RS15595	COG0625	glutathione transferase activity
AM455_RS15600	COG2133	pyrroloquinoline quinone binding
AM455_RS15610	COG2223	nitrite transmembrane transporter activity
AM455_RS15635	COG0747	negative chemotaxis
AM455_RS15650	COG0303	'Molybdopterin
AM455_RS15655	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM455_RS15660	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM455_RS15665	COG1882	Formate acetyltransferase
AM455_RS15670	COG0561	phosphatase activity
AM455_RS15680	COG1609	Transcriptional regulator
AM455_RS15685	COG2271	Major facilitator Superfamily
AM455_RS15695	COG0488	(ABC) transporter
AM455_RS15700	COG2365	Tyrosine phosphatase family
AM455_RS15705	COG1376	ErfK ybiS ycfS ynhG family protein
AM455_RS15710	COG2188	Transcriptional regulator
AM455_RS15715	COG2723	6-phospho-beta-galactosidase activity
AM455_RS15720	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM455_RS15735	COG2194	sulfuric ester hydrolase activity
AM455_RS15740	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM455_RS15755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS15760	COG0765	amino acid transport
AM455_RS15765	COG1126	abc transporter atp-binding protein
AM455_RS15770	COG0668	transmembrane transport
AM455_RS15780	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM455_RS15790	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM455_RS15800	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM455_RS15805	COG1199	ATP-dependent helicase activity
AM455_RS15810	COG0513	Belongs to the DEAD box helicase family
AM455_RS15815	COG3958	Transketolase
AM455_RS15820	COG3959	Transketolase, thiamine diphosphate binding domain
AM455_RS15825	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS15830	COG2271	Major facilitator Superfamily
AM455_RS15835	COG0583	DNA-binding transcription factor activity
AM455_RS15840	COG1309	transcriptional regulator
AM455_RS15845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS15850	COG1131	(ABC) transporter
AM455_RS15855	COG0842	Transport permease protein
AM455_RS15860	COG0842	Transport permease protein
AM455_RS15875	COG3568	Endonuclease Exonuclease Phosphatase
AM455_RS15880	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM455_RS15885	COG0392	lysyltransferase activity
AM455_RS15890	COG0670	Belongs to the BI1 family
AM455_RS15895	COG0314	molybdopterin synthase activity
AM455_RS15900	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AM455_RS15910	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM455_RS15935	COG0745	RESPONSE REGULATOR receiver
AM455_RS15940	COG0642	Histidine kinase
AM455_RS15975	COG2226	methyltransferase
AM455_RS15995	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM455_RS16000	COG1881	PFAM PEBP family protein
AM455_RS16035	COG4677	pectinesterase activity
AM455_RS16045	COG0589	response to stress
AM455_RS16050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS16080	COG0789	Transcriptional regulator
AM455_RS16085	COG2200	EAL domain
AM455_RS16110	COG0561	phosphatase activity
AM455_RS16120	COG4149	molybdate abc transporter
AM455_RS16125	COG0725	ABC transporter, periplasmic molybdate-binding protein
AM455_RS16135	COG2005	Transcriptional regulator
AM455_RS16135	COG3585	molybdate ion transport
AM455_RS16140	COG1119	ATPase activity
AM455_RS16150	COG1085	galactose-1-phosphate uridylyltransferase
AM455_RS16160	COG2017	converts alpha-aldose to the beta-anomer
AM455_RS16170	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM455_RS16185	COG3201	nicotinamide mononucleotide transporter
AM455_RS16190	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AM455_RS16235	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AM455_RS16240	COG2885	chlorophyll binding
AM455_RS16250	COG3064	Membrane
AM455_RS16255	COG0848	biopolymer transport protein
AM455_RS16260	COG0811	peptide transport
AM455_RS16265	COG0824	Thioesterase
AM455_RS16270	COG3790	cyd operon protein YbgE
AM455_RS16275	COG4890	Cyd operon protein YbgT
AM455_RS16280	COG1294	oxidase, subunit
AM455_RS16285	COG1271	oxidase subunit
AM455_RS16295	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM455_RS16305	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM455_RS16310	COG0567	Dehydrogenase, E1 component
AM455_RS16315	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM455_RS16320	COG1053	succinate dehydrogenase
AM455_RS16325	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AM455_RS16330	COG2009	succinate dehydrogenase
AM455_RS16375	COG1984	allophanate hydrolase subunit 2
AM455_RS16380	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AM455_RS16395	COG0415	Belongs to the DNA photolyase family
AM455_RS16425	COG2205	protein histidine kinase activity
AM455_RS16430	COG0745	RESPONSE REGULATOR receiver
AM455_RS16440	COG0033	Phosphoglucomutase
AM455_RS16450	COG0596	Alpha beta hydrolase
AM455_RS16465	COG0735	belongs to the Fur family
AM455_RS16510	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM455_RS16515	COG1846	Transcriptional regulator
AM455_RS16515	COG1940	carbohydrate kinase activity
AM455_RS16520	COG0647	UMP catabolic process
AM455_RS16525	COG0367	asparagine synthase
AM455_RS16570	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM455_RS16580	COG1702	phosphate starvation-inducible protein PhoH
AM455_RS16605	COG0765	amino acid transport
AM455_RS16610	COG0765	amino acid transport
AM455_RS16615	COG1126	abc transporter atp-binding protein
AM455_RS16630	COG2888	peptidyl-tyrosine sulfation
AM455_RS16645	COG1466	dna polymerase III delta subunit
AM455_RS16665	COG0799	negative regulation of ribosome biogenesis
AM455_RS16675	COG0768	penicillin binding
AM455_RS16680	COG0772	Belongs to the SEDS family
AM455_RS16685	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM455_RS16690	COG1686	Belongs to the peptidase S11 family
AM455_RS16705	COG0583	DNA-binding transcription factor activity
AM455_RS16720	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM455_RS16745	COG3069	C4-dicarboxylate transmembrane transporter activity
AM455_RS16750	COG3719	Belongs to the RNase T2 family
AM455_RS16755	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM455_RS16775	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM455_RS16780	COG0583	DNA-binding transcription factor activity
AM455_RS16785	COG3969	phosphoadenosine phosphosulfate
AM455_RS16790	COG1475	DNA binding
AM455_RS16795	COG0436	Aminotransferase
AM455_RS16820	COG1129	ABC transporter
AM455_RS16825	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS16830	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS16840	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM455_RS16855	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM455_RS16865	COG0402	S-adenosylhomocysteine deaminase activity
AM455_RS16875	COG0483	inositol monophosphate 1-phosphatase activity
AM455_RS16880	COG2271	Major facilitator Superfamily
AM455_RS16910	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS16915	COG1129	ABC transporter
AM455_RS16920	COG0371	Dehydrogenase
AM455_RS16925	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS16940	COG2879	small protein
AM455_RS16945	COG1966	Carbon starvation protein
AM455_RS16955	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS16960	COG1535	isochorismatase
AM455_RS16960	COG3433	isochorismatase activity
AM455_RS16965	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM455_RS16970	COG1169	isochorismate synthase
AM455_RS16975	COG4592	Periplasmic binding protein
AM455_RS16985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS16990	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS16995	COG1120	ATPase activity
AM455_RS17000	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AM455_RS17000	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM455_RS17005	COG3251	PFAM MbtH domain protein
AM455_RS17010	COG2382	esterase
AM455_RS17015	COG4771	TonB-dependent receptor
AM455_RS17020	COG2977	Belongs to the P-Pant transferase superfamily
AM455_RS17025	COG3958	Transketolase
AM455_RS17030	COG3959	Transketolase, thiamine diphosphate binding domain
AM455_RS17040	COG2390	Transcriptional regulator
AM455_RS17045	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AM455_RS17050	COG1879	ABC-type sugar transport system periplasmic component
AM455_RS17075	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS17085	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS17095	COG0583	DNA-binding transcription factor activity
AM455_RS17100	COG0668	transmembrane transport
AM455_RS17110	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM455_RS17140	COG0747	negative chemotaxis
AM455_RS17145	COG0601	transmembrane transport
AM455_RS17150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM455_RS17155	COG0444	Belongs to the ABC transporter superfamily
AM455_RS17160	COG4608	Belongs to the ABC transporter superfamily
AM455_RS17175	COG0656	L-ascorbic acid biosynthetic process
AM455_RS17195	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM455_RS17200	COG4221	oxidoreductase activity
AM455_RS17210	COG4215	(ABC) transporter
AM455_RS17215	COG0765	amino acid transport
AM455_RS17220	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AM455_RS17235	COG0697	spore germination
AM455_RS17245	COG3698	Phosphodiester glycosidase
AM455_RS17290	COG2315	Protein conserved in bacteria
AM455_RS17295	COG0778	Nitroreductase
AM455_RS17305	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS17315	COG3716	PTS system mannose fructose sorbose family IID component
AM455_RS17320	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM455_RS17325	COG2222	sugar isomerase
AM455_RS17330	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AM455_RS17330	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM455_RS17355	COG0477	Major facilitator Superfamily
AM455_RS17360	COG0668	transmembrane transport
AM455_RS17365	COG1609	Transcriptional regulator
AM455_RS17375	COG0673	inositol 2-dehydrogenase activity
AM455_RS17385	COG2211	Major facilitator Superfamily
AM455_RS17390	COG1113	amino acid transport
AM455_RS17405	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS17410	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM455_RS17420	COG0531	amino acid
AM455_RS17475	COG0667	Aldo Keto reductase
AM455_RS17480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS17485	COG1473	amidohydrolase
AM455_RS17505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS17510	COG1120	ATPase activity
AM455_RS17515	COG1566	PFAM secretion protein HlyD family protein
AM455_RS17560	COG4211	Belongs to the binding-protein-dependent transport system permease family
AM455_RS17565	COG1129	ABC transporter
AM455_RS17580	COG0673	inositol 2-dehydrogenase activity
AM455_RS17610	COG3104	oligopeptide transport
AM455_RS17615	COG1982	Orn Lys Arg decarboxylase major
AM455_RS17625	COG3710	Transcriptional regulator
AM455_RS17635	COG1560	Kdo2-lipid A biosynthetic process
AM455_RS17650	COG3188	usher protein
AM455_RS17655	COG3121	Chaperone
AM455_RS17660	COG3539	Fimbrial protein
AM455_RS17715	COG2501	S4 domain
AM455_RS17725	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM455_RS17745	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AM455_RS17750	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AM455_RS17765	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AM455_RS17770	COG4181	ATPase activity
AM455_RS17775	COG2755	lipolytic protein G-D-S-L family
AM455_RS17780	COG0300	oxidoreductase activity
AM455_RS17785	COG3118	belongs to the thioredoxin family
AM455_RS17795	COG0390	transport system, permease component
AM455_RS17800	COG4619	ABC transporter
AM455_RS17810	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM455_RS17825	COG3735	TraB family
AM455_RS17830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM455_RS17840	COG2223	nitrite transmembrane transporter activity
AM455_RS17845	COG4651	solute:proton antiporter activity
AM455_RS17845	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM455_RS17850	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS17890	COG2832	Protein of unknown function (DUF454)
AM455_RS17895	COG3923	Primosomal replication protein n
AM455_RS17910	COG3264	Mechanosensitive ion channel
AM455_RS17910	COG1196	nuclear chromosome segregation
AM455_RS17915	COG1309	transcriptional regulator
AM455_RS17920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS17925	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM455_RS17940	COG0110	maltose O-acetyltransferase activity
AM455_RS17985	COG1874	Beta-galactosidase
AM455_RS17990	COG3867	Arabinogalactan endo-beta-1,4-galactanase
AM455_RS17995	COG3833	ABC-type maltose transport systems, permease component
AM455_RS18000	COG1175	transmembrane transport
AM455_RS18005	COG2182	Extracellular solute-binding protein
AM455_RS18015	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM455_RS18030	COG2364	Membrane
AM455_RS18060	COG3695	enzyme binding
AM455_RS18065	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AM455_RS18070	COG1946	Acyl-CoA thioesterase
AM455_RS18075	COG0004	ammonium transporteR
AM455_RS18080	COG0347	Belongs to the P(II) protein family
AM455_RS18085	COG1132	(ABC) transporter
AM455_RS18090	COG1132	(ABC) transporter
AM455_RS18095	COG1522	sequence-specific DNA binding
AM455_RS18110	COG4533	DNA binding
AM455_RS18120	COG0824	Thioesterase
AM455_RS18125	COG1555	photosystem II stabilization
AM455_RS18130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM455_RS18135	COG0776	regulation of translation
AM455_RS18140	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AM455_RS18170	COG0271	Belongs to the BolA IbaG family
AM455_RS18175	COG3056	Lipoprotein
AM455_RS18180	COG2223	nitrite transmembrane transporter activity
AM455_RS18185	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM455_RS18190	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM455_RS18195	COG1845	cytochrome c oxidase, subunit III
AM455_RS18200	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM455_RS18215	COG1414	Transcriptional regulator
AM455_RS18220	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM455_RS18225	COG1053	succinate dehydrogenase
AM455_RS18235	COG1053	succinate dehydrogenase
AM455_RS18250	COG0673	inositol 2-dehydrogenase activity
AM455_RS18255	COG2814	Major facilitator Superfamily
AM455_RS18265	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AM455_RS18270	COG0693	protein deglycase activity
AM455_RS18290	COG0142	geranyltranstransferase activity
AM455_RS18300	COG0667	Aldo Keto reductase
AM455_RS18305	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AM455_RS18325	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM455_RS18325	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM455_RS18335	COG4238	major outer membrane lipoprotein
AM455_RS18355	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM455_RS18360	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM455_RS18365	COG1862	Preprotein translocase
AM455_RS18385	COG0450	alkyl hydroperoxide reductase
AM455_RS18390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS18405	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS18415	COG1228	amidohydrolase
AM455_RS18425	COG1335	isochorismatase
AM455_RS18435	COG0366	Alpha amylase catalytic
AM455_RS18460	COG0420	3'-5' exonuclease activity
AM455_RS18465	COG0419	ATPase involved in DNA repair
AM455_RS18470	COG1940	carbohydrate kinase activity
AM455_RS18485	COG4126	flavin adenine dinucleotide binding
AM455_RS18495	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AM455_RS18500	COG3416	Protein conserved in bacteria
AM455_RS18510	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AM455_RS18520	COG1785	Belongs to the alkaline phosphatase family
AM455_RS18560	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AM455_RS18565	COG1335	isochorismatase
AM455_RS18570	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM455_RS18575	COG0113	porphobilinogen synthase activity
AM455_RS18590	COG2175	clavaminate synthase activity
AM455_RS18595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM455_RS18600	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AM455_RS18605	COG4521	taurine ABC transporter
AM455_RS18610	COG2040	homocysteine
AM455_RS18615	COG0833	amino acid
AM455_RS18625	COG4303	Ethanolamine ammonia lyase large subunit
AM455_RS18630	COG4302	ethanolamine ammonia-lyase activity
AM455_RS18665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS18670	COG1126	abc transporter atp-binding protein
AM455_RS18675	COG4597	amino acid ABC transporter
AM455_RS18680	COG0765	amino acid transport
AM455_RS18695	COG3188	usher protein
AM455_RS18720	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AM455_RS18730	COG3639	organic phosphonate transmembrane transporter activity
AM455_RS18755	COG0791	NLP P60 protein
AM455_RS18780	COG0582	viral genome integration into host DNA
AM455_RS18785	COG1278	Cold shock
AM455_RS18845	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AM455_RS18850	COG0022	dehydrogenase e1 component
AM455_RS18855	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM455_RS18860	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM455_RS18870	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AM455_RS18890	COG0579	oxidoreductase
AM455_RS18895	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS18900	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM455_RS18905	COG1113	amino acid transport
AM455_RS18910	COG1802	Transcriptional regulator
AM455_RS18930	COG2195	Cleaves the N-terminal amino acid of tripeptides
AM455_RS18935	COG0454	-acetyltransferase
AM455_RS18950	COG2991	Protein conserved in bacteria
AM455_RS18965	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM455_RS18970	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM455_RS18990	COG3034	peptidoglycan biosynthetic process
AM455_RS18995	COG0121	glutamine amidotransferase
AM455_RS19005	COG1960	acyl-CoA dehydrogenase activity
AM455_RS19010	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM455_RS19020	COG0583	DNA-binding transcription factor activity
AM455_RS19030	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM455_RS19040	COG2226	methyltransferase
AM455_RS19050	COG0741	lytic transglycosylase activity
AM455_RS19050	COG1388	LysM domain
AM455_RS19055	COG2226	methyltransferase
AM455_RS19065	COG2814	Major facilitator Superfamily
AM455_RS19070	COG0583	DNA-binding transcription factor activity
AM455_RS19075	COG0656	L-ascorbic acid biosynthetic process
AM455_RS19115	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM455_RS19125	COG2011	ABC-type metal ion transport system permease component
AM455_RS19130	COG1464	Belongs to the NlpA lipoprotein family
AM455_RS19140	COG1720	tRNA m6t6A37 methyltransferase activity
AM455_RS19150	COG0791	NLP P60 protein
AM455_RS19155	COG3015	lipoprotein NlpE involved in copper resistance
AM455_RS19160	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM455_RS19175	COG4568	rho-dependent transcription termination
AM455_RS19185	COG0346	lactoylglutathione lyase activity
AM455_RS19190	COG1982	Orn Lys Arg decarboxylase major
AM455_RS19200	COG0587	DNA-directed DNA polymerase activity
AM455_RS19230	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AM455_RS19240	COG0750	zinc metalloprotease
AM455_RS19245	COG0575	Belongs to the CDS family
AM455_RS19260	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AM455_RS19285	COG0024	Methionine aminopeptidase
AM455_RS19290	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AM455_RS19305	COG3835	regulator
AM455_RS19310	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM455_RS19330	COG2860	membrane
AM455_RS19350	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM455_RS19355	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM455_RS19360	COG1120	ATPase activity
AM455_RS19365	COG4774	siderophore transport
AM455_RS19370	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM455_RS19460	COG1643	Atp-dependent helicase
AM455_RS19465	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AM455_RS19485	COG0617	tRNA 3'-terminal CCA addition
AM455_RS19490	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AM455_RS19510	COG0726	polysaccharide deacetylase
AM455_RS19515	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS19520	COG0842	Transport permease protein
AM455_RS19525	COG1131	(ABC) transporter
AM455_RS19530	COG0288	reversible hydration of carbon dioxide
AM455_RS19540	COG4993	Dehydrogenase
AM455_RS19545	COG2132	Multicopper oxidase
AM455_RS19595	COG3064	Membrane
AM455_RS19610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM455_RS19615	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM455_RS19620	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AM455_RS19625	COG2186	Transcriptional regulator
AM455_RS19630	COG1113	amino acid transport
AM455_RS19635	COG2211	Major facilitator Superfamily
AM455_RS19640	COG3940	Belongs to the glycosyl hydrolase 43 family
AM455_RS19645	COG3725	Membrane protein required for beta-lactamase induction
AM455_RS19650	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM455_RS19660	COG4969	Belongs to the N-Me-Phe pilin family
AM455_RS19665	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM455_RS19670	COG1459	type II secretion system
AM455_RS19695	COG0494	nUDIX hydrolase
AM455_RS19715	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AM455_RS19720	COG0849	cell division
AM455_RS19745	COG0772	Belongs to the SEDS family
AM455_RS19760	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AM455_RS19765	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM455_RS19770	COG0768	penicillin binding
AM455_RS19790	COG1609	Transcriptional regulator
AM455_RS19800	COG0028	Belongs to the TPP enzyme family
AM455_RS19850	COG0738	Major facilitator superfamily
AM455_RS19860	COG0583	DNA-binding transcription factor activity
AM455_RS19865	COG2271	Major facilitator Superfamily
AM455_RS19870	COG2814	Major facilitator Superfamily
AM455_RS19890	COG1178	ABC-type Fe3 transport system permease component
AM455_RS19900	COG0586	Pfam SNARE associated Golgi protein
AM455_RS19920	COG0235	Class ii aldolase
AM455_RS19925	COG0417	DNA replication proofreading
AM455_RS19935	COG0564	pseudouridine synthase activity
AM455_RS19950	COG3493	citrate carrier protein
AM455_RS19965	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AM455_RS19970	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM455_RS19980	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AM455_RS20030	COG0505	Belongs to the CarA family
AM455_RS20045	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AM455_RS20070	COG1047	Peptidyl-prolyl cis-trans
AM455_RS20085	COG0196	riboflavin kinase activity
AM455_RS20100	COG0583	DNA-binding transcription factor activity
AM455_RS20125	COG4735	regulation of single-species biofilm formation
AM455_RS20130	COG1584	GPR1 FUN34 yaaH family protein
AM455_RS20135	COG0477	Major facilitator Superfamily
AM455_RS20140	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM455_RS20145	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM455_RS20150	COG1115	amino acid carrier protein
AM455_RS20165	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AM455_RS20175	COG0460	homoserine dehydrogenase
AM455_RS20175	COG0527	aspartate kinase activity
AM455_RS20185	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AM455_RS20200	COG0745	RESPONSE REGULATOR receiver
AM455_RS20205	COG4452	Inner membrane protein CreD
AM455_RS20210	COG2205	protein histidine kinase activity
AM455_RS20215	COG0745	RESPONSE REGULATOR receiver
AM455_RS20220	COG3045	CreA protein
AM455_RS20225	COG3708	Transcriptional regulator
AM455_RS20225	COG2207	Transcriptional regulator
AM455_RS20245	COG0741	lytic transglycosylase activity
AM455_RS20250	COG0488	(ABC) transporter
AM455_RS20260	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AM455_RS20265	COG0560	Phosphoserine phosphatase
AM455_RS20275	COG3726	membrane protein affecting hemolysin expression
AM455_RS20305	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM455_RS20310	COG0084	hydrolase, TatD family'
AM455_RS20315	COG4667	esterase of the alpha-beta hydrolase superfamily
AM455_RS20325	COG2823	Periplasmic or secreted lipoprotein
AM455_RS20335	COG1011	Hydrolase
AM455_RS20340	COG0456	acetyltransferase
AM455_RS20345	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AM455_RS20375	COG3706	GGDEF domain
AM455_RS20380	COG4114	ferric iron reductase
AM455_RS20385	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS20385	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS20390	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM455_RS20395	COG2197	response regulator
AM455_RS20400	COG2197	response regulator
AM455_RS20435	COG2966	Psort location CytoplasmicMembrane, score
AM455_RS20450	COG1484	DNA-dependent DNA replication
AM455_RS20465	COG5464	transposase or invertase
AM455_RS20475	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM455_RS20480	COG3716	PTS system mannose fructose sorbose family IID component
AM455_RS20485	COG3715	PTS system
AM455_RS20500	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AM455_RS20500	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM455_RS20510	COG1063	alcohol dehydrogenase
AM455_RS20515	COG1802	Transcriptional regulator
AM455_RS20520	COG2271	Major facilitator Superfamily
AM455_RS20525	COG1214	PFAM Peptidase M22, glycoprotease
AM455_RS20525	COG0456	acetyltransferase
AM455_RS20535	COG1737	Transcriptional regulator
AM455_RS20540	COG0800	Aldolase
AM455_RS20545	COG3734	2-keto-3-deoxy-galactonokinase
AM455_RS20550	COG4145	pantothenate transmembrane transporter activity
AM455_RS20560	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AM455_RS20590	COG1846	Transcriptional regulator
AM455_RS20595	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM455_RS20605	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS20610	COG3384	dioxygenase
AM455_RS20620	COG3971	2-oxopent-4-enoate hydratase activity
AM455_RS20640	COG2368	4-hydroxyphenylacetate
AM455_RS20645	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM455_RS20660	COG1966	Carbon starvation protein
AM455_RS20665	COG2879	small protein
AM455_RS20670	COG0523	cobalamin synthesis protein
AM455_RS20680	COG1012	belongs to the aldehyde dehydrogenase family
AM455_RS20685	COG5464	transposase or invertase
AM455_RS20690	COG1917	Cupin 2, conserved barrel domain protein
AM455_RS20690	COG2207	Transcriptional regulator
AM455_RS20700	COG2733	membrane
AM455_RS20715	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AM455_RS20720	COG1924	4 iron, 4 sulfur cluster binding
AM455_RS20735	COG1566	PFAM secretion protein HlyD family protein
AM455_RS20745	COG5457	Domain of unknown function (DUF1127)
AM455_RS20750	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM455_RS20765	COG0583	DNA-binding transcription factor activity
AM455_RS20770	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM455_RS20780	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS20785	COG1129	ABC transporter
AM455_RS20790	COG1879	ABC-type sugar transport system periplasmic component
AM455_RS20800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS20805	COG1129	ABC transporter
AM455_RS20805	COG0842	Transport permease protein
AM455_RS20810	COG0842	Transport permease protein
AM455_RS20845	COG2850	peptidyl-arginine hydroxylation
AM455_RS20860	COG5002	protein histidine kinase activity
AM455_RS20865	COG0745	RESPONSE REGULATOR receiver
AM455_RS20875	COG1538	Outer membrane efflux protein
AM455_RS20880	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS20885	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS20890	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM455_RS20900	COG3040	lipid binding
AM455_RS20905	COG0789	Transcriptional regulator
AM455_RS20910	COG3631	Ketosteroid isomerase-related protein
AM455_RS20915	COG0300	oxidoreductase activity
AM455_RS20930	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM455_RS20950	COG3272	Protein of unknown function (DUF1722)
AM455_RS20955	COG4580	involved in the transport of maltose and maltodextrins
AM455_RS20960	COG2115	Belongs to the xylose isomerase family
AM455_RS20965	COG2211	Major facilitator Superfamily
AM455_RS20970	COG3507	Belongs to the glycosyl hydrolase 43 family
AM455_RS21000	COG0582	viral genome integration into host DNA
AM455_RS21015	COG0288	reversible hydration of carbon dioxide
AM455_RS21020	COG0659	secondary active sulfate transmembrane transporter activity
AM455_RS21025	COG1064	alcohol dehydrogenase
AM455_RS21030	COG1175	transmembrane transport
AM455_RS21035	COG0395	ABC-type sugar transport system, permease component
AM455_RS21040	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM455_RS21045	COG3842	ATPase activity
AM455_RS21060	COG1082	Xylose isomerase domain protein TIM barrel
AM455_RS21070	COG3962	Belongs to the TPP enzyme family
AM455_RS21075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS21080	COG0837	glucose binding
AM455_RS21080	COG1737	Transcriptional regulator
AM455_RS21100	COG3718	enzyme involved in inositol metabolism
AM455_RS21115	COG0433	COG0433 Predicted ATPase
AM455_RS21120	COG0795	lipopolysaccharide-transporting ATPase activity
AM455_RS21125	COG0795	lipopolysaccharide-transporting ATPase activity
AM455_RS21140	COG2927	DNA polymerase III (CHI subunit)
AM455_RS21145	COG0525	valine-tRNA ligase activity
AM455_RS21170	COG2188	Transcriptional regulator
AM455_RS21175	COG1288	antiporter activity
AM455_RS21180	COG1228	amidohydrolase
AM455_RS21185	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS21190	COG2222	sugar isomerase
AM455_RS21195	COG2731	YhcH YjgK YiaL family protein
AM455_RS21240	COG1263	PTS System
AM455_RS21240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS21245	COG0366	Alpha amylase catalytic
AM455_RS21250	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS21255	COG1486	melibiose metabolic process
AM455_RS21275	COG0602	queuosine metabolic process
AM455_RS21280	COG2026	Addiction module toxin, RelE StbE family
AM455_RS21285	COG3077	Addiction module antitoxin, RelB DinJ family
AM455_RS21290	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM455_RS21290	COG3711	transcriptional antiterminator
AM455_RS21295	COG2706	6-phosphogluconolactonase activity
AM455_RS21310	COG3964	amidohydrolase
AM455_RS21345	COG0312	modulator of DNA gyrase
AM455_RS21365	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AM455_RS21375	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS21380	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS21385	COG1129	ABC transporter
AM455_RS21390	COG1879	ABC-type sugar transport system periplasmic component
AM455_RS21405	COG2105	PFAM AIG2 family protein
AM455_RS21410	COG2911	Protein conserved in bacteria
AM455_RS21415	COG0729	surface antigen
AM455_RS21425	COG1253	flavin adenine dinucleotide binding
AM455_RS21440	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM455_RS21455	COG1733	regulation of RNA biosynthetic process
AM455_RS21460	COG0702	epimerase
AM455_RS21470	COG0697	spore germination
AM455_RS21480	COG1113	amino acid transport
AM455_RS21485	COG0545	Peptidyl-prolyl cis-trans isomerase
AM455_RS21490	COG3061	Opacity-associated protein A
AM455_RS21500	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AM455_RS21505	COG2965	DNA replication, synthesis of RNA primer
AM455_RS21565	COG1073	alpha beta
AM455_RS21570	COG3650	response to hydrogen peroxide
AM455_RS21580	COG1960	acyl-CoA dehydrogenase activity
AM455_RS21585	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM455_RS21590	COG0557	exoribonuclease II activity
AM455_RS21605	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AM455_RS21615	COG0330	HflC and HflK could
AM455_RS21620	COG0330	HflC and HflK could
AM455_RS21625	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AM455_RS21645	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM455_RS21650	COG0802	atpase or kinase
AM455_RS21655	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AM455_RS21655	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AM455_RS21660	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM455_RS21685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM455_RS21710	COG3264	Mechanosensitive ion channel
AM455_RS21710	COG1511	domain protein
AM455_RS21725	COG1053	succinate dehydrogenase
AM455_RS21730	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM455_RS21750	COG2076	Multidrug Resistance protein
AM455_RS21755	COG5510	response to toxic substance
AM455_RS21770	COG1509	lysine 2,3-aminomutase activity
AM455_RS21845	COG0531	amino acid
AM455_RS21850	COG3030	protein affecting phage T7 exclusion by the F plasmid
AM455_RS21860	COG1027	Aspartate ammonia-lyase
AM455_RS21865	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM455_RS21880	COG1309	transcriptional regulator
AM455_RS21905	COG0457	Tetratricopeptide repeat
AM455_RS21910	COG0726	polysaccharide deacetylase
AM455_RS21910	COG1649	PFAM Uncharacterised BCR, COG1649
AM455_RS21915	COG1215	transferase activity, transferring glycosyl groups
AM455_RS21935	COG0861	Integral membrane protein TerC family
AM455_RS21965	COG1486	melibiose metabolic process
AM455_RS21975	COG2169	Transcriptional regulator
AM455_RS21990	COG2824	Alkylphosphonate utilization operon protein PhnA
AM455_RS21995	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AM455_RS22000	COG2188	Transcriptional regulator
AM455_RS22005	COG3624	Phosphonate C-P lyase system protein PhnG
AM455_RS22010	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AM455_RS22015	COG3626	phosphonate metabolism
AM455_RS22020	COG3627	carbon phosphorus lyase activity
AM455_RS22025	COG4107	phosphonate C-P lyase system protein PhnK
AM455_RS22030	COG4778	phosphonate C-P lyase system protein PhnL
AM455_RS22035	COG3454	Phosphonate metabolism
AM455_RS22045	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AM455_RS22055	COG0784	Response regulator, receiver
AM455_RS22055	COG4191	Histidine kinase
AM455_RS22060	COG1129	ABC transporter
AM455_RS22065	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS22100	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM455_RS22105	COG1301	dicarboxylic acid transport
AM455_RS22115	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM455_RS22125	COG3162	membrane
AM455_RS22155	COG3539	Fimbrial protein
AM455_RS22160	COG1346	cytolysis
AM455_RS22165	COG1380	Effector of murein hydrolase LrgA
AM455_RS22170	COG0583	DNA-binding transcription factor activity
AM455_RS22175	COG0025	NhaP-type Na H and K H
AM455_RS22180	COG2252	PERMEase
AM455_RS22185	COG0625	glutathione transferase activity
AM455_RS22190	COG0789	Transcriptional regulator
AM455_RS22200	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM455_RS22235	COG1234	tRNA 3'-trailer cleavage
AM455_RS22240	COG1609	Transcriptional regulator
AM455_RS22245	COG0483	inositol monophosphate 1-phosphatase activity
AM455_RS22260	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM455_RS22280	COG4771	TonB-dependent receptor
AM455_RS22285	COG0741	lytic transglycosylase activity
AM455_RS22305	COG2315	Protein conserved in bacteria
AM455_RS22310	COG0432	Pfam Uncharacterised protein family UPF0047
AM455_RS22325	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM455_RS22330	COG0305	Participates in initiation and elongation during chromosome replication
AM455_RS22345	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM455_RS22355	COG0735	belongs to the Fur family
AM455_RS22360	COG3237	CsbD-like
AM455_RS22365	COG0534	Mate efflux family protein
AM455_RS22375	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AM455_RS22450	COG0251	oxidation-reduction process
AM455_RS22460	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AM455_RS22480	COG0527	aspartate kinase activity
AM455_RS22535	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM455_RS22565	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM455_RS22575	COG0456	acetyltransferase
AM455_RS22620	COG0151	Belongs to the GarS family
AM455_RS22630	COG4191	Histidine kinase
AM455_RS22635	COG3678	ATP-independent chaperone mediated protein folding
AM455_RS22670	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AM455_RS22685	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM455_RS22690	COG2104	thiamine diphosphate biosynthetic process
AM455_RS22710	COG3706	GGDEF domain
AM455_RS22720	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM455_RS22725	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM455_RS22765	COG0250	Participates in transcription elongation, termination and antitermination
AM455_RS22815	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AM455_RS22845	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AM455_RS22855	COG1739	Uncharacterized protein family UPF0029
AM455_RS22900	COG0805	protein transport
AM455_RS22920	COG3165	ubiquinone biosynthetic process from chorismate
AM455_RS22950	COG0583	DNA-binding transcription factor activity
AM455_RS22955	COG0697	spore germination
AM455_RS22960	COG0561	phosphatase activity
AM455_RS22965	COG2267	carboxylic ester hydrolase activity
AM455_RS22970	COG1280	lysine exporter protein (LysE YggA)
AM455_RS22980	COG1280	lysine exporter protein (LysE YggA)
AM455_RS23015	COG0210	DNA helicase
AM455_RS23020	COG1011	Hydrolase
AM455_RS23050	COG3072	Adenylate cyclase
AM455_RS23065	COG2959	enzyme of heme biosynthesis
AM455_RS23070	COG3071	HemY protein
AM455_RS23115	COG2244	polysaccharide biosynthetic process
AM455_RS23120	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AM455_RS23125	COG0456	acetyltransferase
AM455_RS23130	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AM455_RS23135	COG1088	dTDP-glucose 4,6-dehydratase activity
AM455_RS23140	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AM455_RS23145	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AM455_RS23155	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AM455_RS23160	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AM455_RS23170	COG3118	belongs to the thioredoxin family
AM455_RS23200	COG1811	Na channel or pump
AM455_RS23210	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM455_RS23215	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM455_RS23225	COG0583	DNA-binding transcription factor activity
AM455_RS23230	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM455_RS23245	COG3978	acetolactate synthase activity
AM455_RS23265	COG3085	chromosome segregation
AM455_RS23340	COG0583	DNA-binding transcription factor activity
AM455_RS23365	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AM455_RS23380	COG3443	Belongs to the bacterial solute-binding protein 9 family
AM455_RS23385	COG2207	Transcriptional regulator
AM455_RS23395	COG0371	Dehydrogenase
AM455_RS23405	COG0583	DNA-binding transcription factor activity
AM455_RS23415	COG0737	Belongs to the 5'-nucleotidase family
AM455_RS23425	COG0527	aspartate kinase activity
AM455_RS23425	COG0460	homoserine dehydrogenase
AM455_RS23430	COG0626	cystathionine gamma-synthase activity
AM455_RS23445	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AM455_RS23450	COG1609	Transcriptional regulator
AM455_RS23455	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM455_RS23470	COG1575	Belongs to the MenA family. Type 1 subfamily
AM455_RS23490	COG3678	ATP-independent chaperone mediated protein folding
AM455_RS23495	COG0745	RESPONSE REGULATOR receiver
AM455_RS23500	COG2205	protein histidine kinase activity
AM455_RS23505	COG2258	MOSC domain
AM455_RS23510	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM455_RS23555	COG1129	ABC transporter
AM455_RS23560	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS23565	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS23570	COG1454	alcohol dehydrogenase
AM455_RS23580	COG2211	Major facilitator Superfamily
AM455_RS23655	COG0205	6-phosphofructokinase activity
AM455_RS23670	COG3383	formate dehydrogenase (NAD+) activity
AM455_RS23670	COG0243	molybdopterin cofactor binding
AM455_RS23675	COG3383	formate dehydrogenase (NAD+) activity
AM455_RS23675	COG0243	molybdopterin cofactor binding
AM455_RS23680	COG0437	4 iron, 4 sulfur cluster binding
AM455_RS23685	COG2864	formate dehydrogenase
AM455_RS23700	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM455_RS23705	COG0657	acetylesterase activity
AM455_RS23710	COG0456	acetyltransferase
AM455_RS23725	COG1011	Hydrolase
AM455_RS23745	COG3852	Histidine kinase
AM455_RS23755	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM455_RS23790	COG0204	Acyl-transferase
AM455_RS23800	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AM455_RS23805	COG3084	Protein conserved in bacteria
AM455_RS23815	COG1763	Mo-molybdopterin cofactor biosynthetic process
AM455_RS23845	COG2186	Transcriptional regulator
AM455_RS23850	COG0477	Major facilitator Superfamily
AM455_RS23855	COG1609	Transcriptional regulator
AM455_RS23860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS23870	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM455_RS23875	COG1129	ABC transporter
AM455_RS23905	COG1522	sequence-specific DNA binding
AM455_RS23910	COG0716	FMN binding
AM455_RS23925	COG3312	ion transport
AM455_RS23975	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM455_RS23980	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM455_RS23985	COG0573	inorganic phosphate transmembrane transporter activity
AM455_RS23990	COG0581	inorganic phosphate transmembrane transporter activity
AM455_RS23995	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AM455_RS24000	COG0704	Plays a role in the regulation of phosphate uptake
AM455_RS24015	COG2382	esterase
AM455_RS24020	COG0363	glucosamine-6-phosphate deaminase activity
AM455_RS24025	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM455_RS24035	COG2252	PERMEase
AM455_RS24040	COG0431	NADPH-dependent FMN reductase
AM455_RS24045	COG2091	lysine biosynthetic process via aminoadipic acid
AM455_RS24075	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AM455_RS24110	COG0187	DNA topoisomerase II activity
AM455_RS24115	COG0561	phosphatase activity
AM455_RS24130	COG2186	Transcriptional regulator
AM455_RS24135	COG3734	2-keto-3-deoxy-galactonokinase
AM455_RS24140	COG0800	Aldolase
AM455_RS24150	COG2271	Major facilitator Superfamily
AM455_RS24155	COG0823	Involved in the tonB-independent uptake of proteins
AM455_RS24160	COG5645	(Lipo)protein
AM455_RS24175	COG3645	SOS response
AM455_RS24185	COG2188	Transcriptional regulator
AM455_RS24200	COG2149	membrane
AM455_RS24220	COG2610	gluconate transmembrane transporter activity
AM455_RS24225	COG0583	DNA-binding transcription factor activity
AM455_RS24230	COG2814	Major facilitator Superfamily
AM455_RS24255	COG0028	Belongs to the TPP enzyme family
AM455_RS24260	COG0440	acetolactate synthase activity
AM455_RS24265	COG2197	response regulator
AM455_RS24275	COG2271	Major facilitator Superfamily
AM455_RS24330	COG2188	Transcriptional regulator
AM455_RS24355	COG4580	involved in the transport of maltose and maltodextrins
AM455_RS24360	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM455_RS24365	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS24365	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM455_RS24375	COG1609	Transcriptional regulator
AM455_RS24385	COG3384	dioxygenase
AM455_RS24390	COG0583	DNA-binding transcription factor activity
AM455_RS24395	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AM455_RS24400	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AM455_RS24405	COG2828	Protein conserved in bacteria
AM455_RS24420	COG0697	spore germination
AM455_RS24425	COG1263	PTS System
AM455_RS24425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS24435	COG2814	Major facilitator Superfamily
AM455_RS24445	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM455_RS24470	COG1309	transcriptional regulator
AM455_RS24480	COG0583	DNA-binding transcription factor activity
AM455_RS24505	COG1464	Belongs to the NlpA lipoprotein family
AM455_RS24520	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AM455_RS24530	COG1064	alcohol dehydrogenase
AM455_RS24560	COG2211	Major facilitator Superfamily
AM455_RS24565	COG1501	Belongs to the glycosyl hydrolase 31 family
AM455_RS24575	COG1486	melibiose metabolic process
AM455_RS24580	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM455_RS24580	COG1263	PTS System
AM455_RS24585	COG2982	Protein involved in outer membrane biogenesis
AM455_RS24590	COG2233	PERMEase
AM455_RS24595	COG0786	glutamate:sodium symporter activity
AM455_RS24615	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AM455_RS24640	COG3152	Membrane
AM455_RS24650	COG1494	fructose-1,6-bisphosphatase
AM455_RS24655	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AM455_RS24660	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM455_RS24665	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM455_RS24685	COG2860	membrane
AM455_RS24695	COG2169	Transcriptional regulator
AM455_RS24695	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM455_RS24700	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AM455_RS24705	COG1561	YicC-like family, N-terminal region
AM455_RS24745	COG1131	(ABC) transporter
AM455_RS24750	COG0842	Transport permease protein
AM455_RS24780	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AM455_RS24815	COG1519	Transferase
AM455_RS24820	COG1216	Glycosyl transferase, family 2
AM455_RS24825	COG0438	transferase activity, transferring glycosyl groups
AM455_RS24835	COG0859	PFAM glycosyl transferase family 9
AM455_RS24860	COG0859	PFAM glycosyl transferase family 9
AM455_RS24875	COG0156	8-amino-7-oxononanoate synthase activity
AM455_RS24885	COG0463	Glycosyl transferase, family 2
AM455_RS24890	COG2861	carbohydrate metabolic process
AM455_RS24895	COG4942	peptidase
AM455_RS24905	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM455_RS24910	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM455_RS24930	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AM455_RS24940	COG2186	Transcriptional regulator
AM455_RS24960	COG3722	fumarate hydratase activity
AM455_RS24980	COG1566	PFAM secretion protein HlyD family protein
AM455_RS24985	COG0625	glutathione transferase activity
AM455_RS24995	COG3276	selenocysteine insertion sequence binding
AM455_RS25000	COG1414	Transcriptional regulator
AM455_RS25005	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM455_RS25010	COG3977	Valine--pyruvate aminotransferase
AM455_RS25015	COG0366	Alpha amylase catalytic
AM455_RS25025	COG2992	FlgJ-related protein
AM455_RS25030	COG1609	Transcriptional regulator
AM455_RS25030	COG2207	Transcriptional regulator
AM455_RS25035	COG4214	carbohydrate transport
AM455_RS25045	COG4213	ABC transporter substrate-binding protein
AM455_RS25065	COG4682	membrane
AM455_RS25070	COG4682	membrane
AM455_RS25075	COG3274	enterobacterial common antigen metabolic process
AM455_RS25110	COG1278	Cold shock
AM455_RS25115	COG2944	sequence-specific DNA binding
AM455_RS25120	COG2814	Major facilitator Superfamily
AM455_RS25145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM455_RS25155	COG1609	Transcriptional regulator
AM455_RS25160	COG2885	chlorophyll binding
AM455_RS25165	COG0243	molybdopterin cofactor binding
AM455_RS25170	COG0456	acetyltransferase
AM455_RS25175	COG2818	Glycosylase
AM455_RS25180	COG5571	outer membrane autotransporter
AM455_RS25185	COG2223	nitrite transmembrane transporter activity
AM455_RS25220	COG0747	negative chemotaxis
AM455_RS25225	COG0601	transmembrane transport
AM455_RS25230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM455_RS25235	COG0444	Belongs to the ABC transporter superfamily
AM455_RS25240	COG4608	Belongs to the ABC transporter superfamily
AM455_RS25255	COG2894	cell division
AM455_RS25265	COG1215	transferase activity, transferring glycosyl groups
AM455_RS25270	COG0457	Tetratricopeptide repeat
AM455_RS25285	COG2194	sulfuric ester hydrolase activity
AM455_RS25315	COG1215	transferase activity, transferring glycosyl groups
AM455_RS25320	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AM455_RS25325	COG0457	Tetratricopeptide repeat
AM455_RS25325	COG3118	belongs to the thioredoxin family
AM455_RS25330	COG2200	EAL domain
AM455_RS25330	COG2199	diguanylate cyclase activity
AM455_RS25340	COG0612	Peptidase, M16
AM455_RS25355	COG2982	Protein involved in outer membrane biogenesis
AM455_RS25360	COG0477	Major facilitator Superfamily
AM455_RS25365	COG1295	ribonuclease BN
AM455_RS25370	COG0583	DNA-binding transcription factor activity
AM455_RS25375	COG1028	Short-chain dehydrogenase reductase Sdr
AM455_RS25380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM455_RS25390	COG1454	alcohol dehydrogenase
AM455_RS25400	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM455_RS25405	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AM455_RS25410	COG0671	phosphoesterase, PA-phosphatase related
AM455_RS25430	COG0589	response to stress
AM455_RS25440	COG0306	phosphate transporter
AM455_RS25445	COG2081	HI0933 family
AM455_RS25475	COG1124	(ABC) transporter
AM455_RS25485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM455_RS25490	COG0601	transmembrane transport
AM455_RS25495	COG0747	negative chemotaxis
AM455_RS25510	COG3479	Phenolic acid decarboxylase
AM455_RS25550	COG0628	permease
AM455_RS25555	COG0477	Major facilitator Superfamily
AM455_RS25565	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AM455_RS25580	COG3714	YhhN family
AM455_RS25590	COG3776	membrane
AM455_RS25595	COG0742	ribosomal rna small subunit methyltransferase
AM455_RS25600	COG0552	protein localization to endoplasmic reticulum
AM455_RS25605	COG2884	Cell division ATP-binding protein ftsE
AM455_RS25610	COG2177	Part of the ABC transporter FtsEX involved in
AM455_RS25625	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM455_RS25635	COG0683	leucine binding
AM455_RS25650	COG0683	leucine binding
AM455_RS25655	COG0559	Belongs to the binding-protein-dependent transport system permease family
AM455_RS25705	COG0584	glycerophosphoryl diester phosphodiesterase
AM455_RS25715	COG0405	Gamma-glutamyltransferase
AM455_RS25720	COG1247	-acetyltransferase
AM455_RS25735	COG0673	inositol 2-dehydrogenase activity
AM455_RS25740	COG1741	Belongs to the pirin family
AM455_RS25745	COG1609	Transcriptional regulator
AM455_RS25750	COG3265	gluconokinase activity
AM455_RS25755	COG2610	gluconate transmembrane transporter activity
AM455_RS25765	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM455_RS25790	COG0058	SHG alpha-glucan phosphorylase activity
AM455_RS25805	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM455_RS25820	COG1349	DNA-binding transcription factor activity
AM455_RS25835	COG0058	SHG alpha-glucan phosphorylase activity
AM455_RS25840	COG1640	4-alpha-glucanotransferase
AM455_RS25845	COG2610	gluconate transmembrane transporter activity
AM455_RS25855	COG1040	competence protein
AM455_RS25880	COG1918	ferrous iron import across plasma membrane
AM455_RS25885	COG2183	response to ionizing radiation
AM455_RS25890	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM455_RS25915	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AM455_RS25920	COG1011	Hydrolase
AM455_RS25930	COG0494	nUDIX hydrolase
AM455_RS25935	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AM455_RS25960	COG4796	Type ii and iii secretion system protein
AM455_RS26005	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM455_RS26090	COG1192	Involved in chromosome partitioning
AM455_RS26170	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM455_RS26260	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM455_RS26285	COG5001	Diguanylate cyclase
AM455_RS26320	COG0714	Associated with various cellular activities
AM455_RS26330	COG0629	single-stranded DNA binding
AM455_RS26380	COG0633	Ferredoxin
AM455_RS26535	COG5001	Diguanylate cyclase
AM455_RS26535	COG3300	MHYT domain
AM455_RS26605	COG3173	Aminoglycoside phosphotransferase
AM455_RS26640	COG1695	Transcriptional regulator
AM455_RS26670	COG1357	PFAM Pentapeptide repeats (8 copies)
AM455_RS26775	COG4974	Belongs to the 'phage' integrase family
AM455_RS26930	COG0616	signal peptide processing
AM455_RS26975	COG1525	nuclease
AM455_RS27025	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM455_RS27125	COG3039	Transposase
AM455_RS27185	COG3344	reverse transcriptase
AM455_RS27310	COG1475	DNA binding
AM455_RS27340	COG0464	growth
AM455_RS27350	COG2801	Transposase and inactivated derivatives
AM455_RS27355	COG3111	PFAM Bacterial OB fold (BOF) protein
AM455_RS27370	COG2814	Major facilitator Superfamily
AM455_RS27420	COG3077	Addiction module antitoxin, RelB DinJ family
AM455_RS27425	COG2026	Addiction module toxin, RelE StbE family
AM455_RS27475	COG0038	chloride channel
AM455_RS27660	COG0038	chloride channel
AM455_RS27700	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM455_RS27705	COG0501	Belongs to the peptidase M48B family
AM455_RS27745	COG0071	Belongs to the small heat shock protein (HSP20) family
AM455_RS27765	COG0542	response to heat
AM455_RS27770	COG0071	Belongs to the small heat shock protein (HSP20) family
AM455_RS27790	COG0110	maltose O-acetyltransferase activity
AM455_RS27795	COG2223	nitrite transmembrane transporter activity
AM455_RS27805	COG1609	Transcriptional regulator
AM455_RS27825	COG4372	Transposase
AM455_RS27830	COG3436	PFAM IS66 Orf2 family protein
AM455_RS27865	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM455_RS27895	COG0739	heme binding
AM455_RS27905	COG2132	Multicopper oxidase
AM455_RS27910	COG3667	copper resistance
AM455_RS27915	COG2372	response to copper ion
AM455_RS27920	COG1276	copper resistance
AM455_RS27925	COG0745	RESPONSE REGULATOR receiver
AM455_RS27930	COG2205	protein histidine kinase activity
AM455_RS27995	COG2801	Transposase and inactivated derivatives
AM455_RS28005	COG2801	Transposase and inactivated derivatives
AM455_RS28020	COG1401	restriction endodeoxyribonuclease activity
AM455_RS28020	COG1401	restriction endodeoxyribonuclease activity
AM455_RS28085	COG4644	lycopene metabolic process
AM455_RS28090	COG1349	DNA-binding transcription factor activity
AM455_RS28260	COG0629	single-stranded DNA binding
AM455_RS28320	COG2003	Belongs to the UPF0758 family
AM455_RS28350	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM455_RS28525	COG1484	DNA-dependent DNA replication
AM455_RS28530	COG4584	PFAM Integrase catalytic
AM455_RS28560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM455_RS28610	COG3451	type IV secretory pathway VirB4
AM455_RS28625	COG3701	Conjugal transfer protein
AM455_RS28630	COG3504	Conjugal transfer protein
AM455_RS28690	COG4227	nucleotidyltransferase activity
AM455_RS28750	COG4962	Type ii secretion system protein e
AM455_RS28755	COG3838	Conjugal transfer protein Trbc