locus-tag	class	description
AM477_RS00030	COG1929	Belongs to the glycerate kinase type-1 family
AM477_RS00035	COG3835	regulator
AM477_RS00055	COG2186	Transcriptional regulator
AM477_RS00060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS00060	COG1263	PTS System
AM477_RS00070	COG2814	Major facilitator Superfamily
AM477_RS00075	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS00075	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS00085	COG2819	hydrolase of the alpha beta superfamily
AM477_RS00090	COG3300	MHYT domain
AM477_RS00090	COG5001	Diguanylate cyclase
AM477_RS00125	COG3188	usher protein
AM477_RS00140	COG1649	PFAM Uncharacterised BCR, COG1649
AM477_RS00145	COG3550	peptidyl-serine autophosphorylation
AM477_RS00150	COG1396	sequence-specific DNA binding
AM477_RS00155	COG2351	hydroxyisourate hydrolase activity
AM477_RS00160	COG3648	Uricase
AM477_RS00160	COG3195	allantoin biosynthetic process
AM477_RS00165	COG2233	PERMEase
AM477_RS00195	COG2207	Transcriptional regulator
AM477_RS00210	COG4628	conserved protein (DUF2132)
AM477_RS00230	COG2011	ABC-type metal ion transport system permease component
AM477_RS00235	COG2070	2-Nitropropane dioxygenase
AM477_RS00245	COG0477	Major facilitator Superfamily
AM477_RS00320	COG2199	diguanylate cyclase activity
AM477_RS00335	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS00340	COG0583	DNA-binding transcription factor activity
AM477_RS00350	COG0039	L-malate dehydrogenase activity
AM477_RS00355	COG1349	DNA-binding transcription factor activity
AM477_RS00360	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AM477_RS00365	COG3395	kinase activity
AM477_RS00375	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AM477_RS00390	COG2731	YhcH YjgK YiaL family protein
AM477_RS00395	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS00420	COG4977	sequence-specific DNA binding
AM477_RS00430	COG0697	spore germination
AM477_RS00435	COG2814	Major facilitator Superfamily
AM477_RS00445	COG0410	ABC transporter
AM477_RS00450	COG1129	ABC transporter
AM477_RS00465	COG0683	leucine binding
AM477_RS00470	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AM477_RS00505	COG2223	nitrite transmembrane transporter activity
AM477_RS00510	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AM477_RS00525	COG1349	DNA-binding transcription factor activity
AM477_RS00530	COG2084	Dehydrogenase
AM477_RS00535	COG3395	kinase activity
AM477_RS00540	COG0235	Class ii aldolase
AM477_RS00545	COG3622	Belongs to the hyi family
AM477_RS00550	COG2610	gluconate transmembrane transporter activity
AM477_RS00555	COG2207	Transcriptional regulator
AM477_RS00555	COG3708	Transcriptional regulator
AM477_RS00580	COG2200	EAL domain
AM477_RS00585	COG1546	Belongs to the CinA family
AM477_RS00590	COG0071	Belongs to the small heat shock protein (HSP20) family
AM477_RS00605	COG2197	response regulator
AM477_RS00610	COG2135	peptidase activity
AM477_RS00615	COG2207	Transcriptional regulator
AM477_RS00630	COG4221	oxidoreductase activity
AM477_RS00635	COG1802	Transcriptional regulator
AM477_RS00640	COG0589	response to stress
AM477_RS00645	COG0246	Mannitol dehydrogenase
AM477_RS00650	COG2271	Major facilitator Superfamily
AM477_RS00665	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM477_RS00680	COG0243	molybdopterin cofactor binding
AM477_RS00685	COG0437	4 iron, 4 sulfur cluster binding
AM477_RS00690	COG3302	dmso reductase anchor subunit
AM477_RS00705	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM477_RS00710	COG1940	carbohydrate kinase activity
AM477_RS00715	COG0583	DNA-binding transcription factor activity
AM477_RS00720	COG2814	Major facilitator Superfamily
AM477_RS00725	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AM477_RS00735	COG3591	Belongs to the peptidase S1B family
AM477_RS00760	COG0628	permease
AM477_RS00790	COG0679	Auxin Efflux Carrier
AM477_RS00800	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM477_RS00825	COG3290	protein histidine kinase activity
AM477_RS00830	COG4565	transcriptional regulatory protein
AM477_RS00855	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM477_RS00855	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM477_RS00875	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM477_RS00880	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AM477_RS00890	COG0183	Belongs to the thiolase family
AM477_RS00895	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM477_RS00905	COG1414	Transcriptional regulator
AM477_RS00910	COG2840	Smr protein MutS2
AM477_RS00915	COG0583	DNA-binding transcription factor activity
AM477_RS00925	COG1473	amidohydrolase
AM477_RS00930	COG1473	amidohydrolase
AM477_RS00935	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AM477_RS00950	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM477_RS00965	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AM477_RS00970	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AM477_RS00990	COG0531	amino acid
AM477_RS01000	COG3136	membrane protein required for alginate biosynthesis
AM477_RS01005	COG0745	RESPONSE REGULATOR receiver
AM477_RS01015	COG2205	protein histidine kinase activity
AM477_RS01025	COG0114	fumarate hydratase activity
AM477_RS01030	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM477_RS01030	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM477_RS01035	COG1482	cell wall glycoprotein biosynthetic process
AM477_RS01040	COG5339	Protein conserved in bacteria
AM477_RS01045	COG1609	Transcriptional regulator
AM477_RS01050	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS01050	COG1263	PTS System
AM477_RS01055	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM477_RS01080	COG2391	methyltransferase activity
AM477_RS01085	COG0425	Belongs to the sulfur carrier protein TusA family
AM477_RS01090	COG5562	phage envelope protein
AM477_RS01095	COG0401	homolog of Blt101
AM477_RS01100	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM477_RS01105	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS01110	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM477_RS01120	COG0477	Major facilitator Superfamily
AM477_RS01125	COG1113	amino acid transport
AM477_RS01130	COG2988	succinylglutamate desuccinylase activity
AM477_RS01135	COG3724	N-succinylarginine dihydrolase activity
AM477_RS01140	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS01145	COG3138	arginine N-succinyltransferase
AM477_RS01150	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM477_RS01155	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM477_RS01160	COG0667	Aldo Keto reductase
AM477_RS01165	COG0583	DNA-binding transcription factor activity
AM477_RS01190	COG4122	O-methyltransferase activity
AM477_RS01195	COG1643	Atp-dependent helicase
AM477_RS01210	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM477_RS01215	COG3327	negative regulation of DNA-templated transcription, initiation
AM477_RS01220	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AM477_RS01225	COG0183	Belongs to the thiolase family
AM477_RS01230	COG2050	protein possibly involved in aromatic compounds catabolism
AM477_RS01235	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM477_RS01240	COG1024	Enoyl-CoA hydratase
AM477_RS01245	COG1024	Enoyl-CoA hydratase
AM477_RS01250	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM477_RS01255	COG2151	metal-sulfur cluster biosynthetic enzyme
AM477_RS01260	COG3396	Phenylacetate-CoA oxygenase
AM477_RS01265	COG3460	Phenylacetate-CoA oxygenase
AM477_RS01270	COG3396	Phenylacetate-CoA oxygenase
AM477_RS01275	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS01275	COG2030	dehydratase
AM477_RS01305	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS01310	COG2207	Transcriptional regulator
AM477_RS01315	COG3784	Protein of unknown function (DUF1318)
AM477_RS01325	COG2911	Protein conserved in bacteria
AM477_RS01330	COG0586	Pfam SNARE associated Golgi protein
AM477_RS01335	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AM477_RS01340	COG3187	Heat shock protein
AM477_RS01345	COG3042	response to heat
AM477_RS01355	COG1013	pyruvate-flavodoxin oxidoreductase activity
AM477_RS01355	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AM477_RS01355	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM477_RS01355	COG0674	pyruvate-flavodoxin oxidoreductase activity
AM477_RS01360	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM477_RS01370	COG0589	response to stress
AM477_RS01380	COG0513	Belongs to the DEAD box helicase family
AM477_RS01400	COG1349	DNA-binding transcription factor activity
AM477_RS01405	COG0673	inositol 2-dehydrogenase activity
AM477_RS01420	COG1113	amino acid transport
AM477_RS01425	COG1522	sequence-specific DNA binding
AM477_RS01435	COG1448	Aminotransferase
AM477_RS01440	COG2011	ABC-type metal ion transport system permease component
AM477_RS01455	COG0436	Aminotransferase
AM477_RS01460	COG0604	alcohol dehydrogenase
AM477_RS01485	COG0583	DNA-binding transcription factor activity
AM477_RS01505	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS01510	COG1309	transcriptional regulator
AM477_RS01515	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS01610	COG2885	chlorophyll binding
AM477_RS01725	COG0739	heme binding
AM477_RS01725	COG1196	nuclear chromosome segregation
AM477_RS01725	COG0741	lytic transglycosylase activity
AM477_RS01805	COG3567	Phage-associated protein, HI1409 family
AM477_RS01810	COG1783	phage Terminase large subunit
AM477_RS01830	COG3772	lysozyme
AM477_RS01840	COG0484	heat shock protein binding
AM477_RS01940	COG0582	viral genome integration into host DNA
AM477_RS01945	COG0693	protein deglycase activity
AM477_RS01950	COG1078	dGTPase activity
AM477_RS01955	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS01960	COG0583	DNA-binding transcription factor activity
AM477_RS01980	COG0656	L-ascorbic acid biosynthetic process
AM477_RS02010	COG4166	transmembrane transport
AM477_RS02015	COG2866	Carboxypeptidase
AM477_RS02020	COG4948	Mandelate Racemase Muconate Lactonizing
AM477_RS02025	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AM477_RS02030	COG3180	Ammonia monooxygenase
AM477_RS02040	COG1486	melibiose metabolic process
AM477_RS02045	COG0583	DNA-binding transcription factor activity
AM477_RS02055	COG3106	COG3106 Predicted ATPase
AM477_RS02065	COG1983	PspC domain protein
AM477_RS02075	COG1842	Phage shock protein A
AM477_RS02080	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM477_RS02090	COG1473	amidohydrolase
AM477_RS02105	COG0702	epimerase
AM477_RS02120	COG2135	peptidase activity
AM477_RS02130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM477_RS02135	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM477_RS02140	COG3344	reverse transcriptase
AM477_RS02295	COG1196	nuclear chromosome segregation
AM477_RS02385	COG5484	DNA packaging
AM477_RS02385	COG3728	DNA packaging
AM477_RS02440	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM477_RS02545	COG4171	peptide transport system, permease
AM477_RS02560	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM477_RS02570	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AM477_RS02575	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM477_RS02575	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM477_RS02590	COG1349	DNA-binding transcription factor activity
AM477_RS02600	COG0023	Translation Initiation Factor
AM477_RS02610	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AM477_RS02615	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AM477_RS02620	COG0671	phosphoesterase, PA-phosphatase related
AM477_RS02630	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM477_RS02665	COG0616	signal peptide processing
AM477_RS02675	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS02680	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
AM477_RS02690	COG0583	DNA-binding transcription factor activity
AM477_RS02700	COG0009	L-threonylcarbamoyladenylate synthase
AM477_RS02710	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM477_RS02715	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM477_RS02715	COG0512	Glutamine amidotransferase of anthranilate synthase
AM477_RS02720	COG0135	phosphoribosylanthranilate isomerase activity
AM477_RS02720	COG0134	indole-3-glycerol-phosphate synthase activity
AM477_RS02775	COG4774	siderophore transport
AM477_RS02785	COG3047	cAMP biosynthetic process
AM477_RS02790	COG0727	PFAM Uncharacterised protein family (UPF0153)
AM477_RS02820	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM477_RS02825	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS02830	COG1988	membrane-bound metal-dependent
AM477_RS02835	COG1823	symporter activity
AM477_RS02845	COG0753	catalase activity
AM477_RS02855	COG1486	melibiose metabolic process
AM477_RS02860	COG1917	Cupin 2, conserved barrel domain protein
AM477_RS02860	COG2169	Transcriptional regulator
AM477_RS02865	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM477_RS02870	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS02875	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS02880	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM477_RS02890	COG0322	excinuclease ABC activity
AM477_RS02895	COG3678	ATP-independent chaperone mediated protein folding
AM477_RS02905	COG3724	N-succinylarginine dihydrolase activity
AM477_RS02915	COG3138	arginine N-succinyltransferase
AM477_RS02925	COG0708	Exodeoxyribonuclease III
AM477_RS02930	COG0398	Pfam SNARE associated Golgi protein
AM477_RS02935	COG0398	Pfam SNARE associated Golgi protein
AM477_RS02940	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM477_RS02945	COG4134	Bacterial extracellular solute-binding protein
AM477_RS02950	COG4135	transport system, permease component
AM477_RS02955	COG4136	ATPase activity
AM477_RS02960	COG2897	thiosulfate sulfurtransferase activity
AM477_RS02965	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM477_RS02970	COG0494	nUDIX hydrolase
AM477_RS02975	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM477_RS02980	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS02980	COG0604	alcohol dehydrogenase
AM477_RS02980	COG3321	synthase
AM477_RS02985	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM477_RS02990	COG0709	Synthesizes selenophosphate from selenide and ATP
AM477_RS03005	COG2801	Transposase and inactivated derivatives
AM477_RS03015	COG0778	Nitroreductase
AM477_RS03020	COG0616	signal peptide processing
AM477_RS03025	COG0252	asparaginase activity
AM477_RS03030	COG1335	isochorismatase
AM477_RS03035	COG2814	Major facilitator Superfamily
AM477_RS03040	COG1349	DNA-binding transcription factor activity
AM477_RS03045	COG0667	Aldo Keto reductase
AM477_RS03050	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS03055	COG0191	fructose-bisphosphate aldolase activity
AM477_RS03060	COG1063	alcohol dehydrogenase
AM477_RS03065	COG2271	Major facilitator Superfamily
AM477_RS03070	COG1063	alcohol dehydrogenase
AM477_RS03085	COG3139	Protein of unknown function (DUF1315)
AM477_RS03105	COG0656	L-ascorbic acid biosynthetic process
AM477_RS03110	COG3713	MltA-interacting MipA family protein
AM477_RS03115	COG2766	serine protein kinase
AM477_RS03130	COG0386	Belongs to the glutathione peroxidase family
AM477_RS03150	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS03155	COG0583	DNA-binding transcription factor activity
AM477_RS03160	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM477_RS03165	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM477_RS03170	COG3344	reverse transcriptase
AM477_RS03185	COG0859	PFAM glycosyl transferase family 9
AM477_RS03190	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM477_RS03200	COG2207	Transcriptional regulator
AM477_RS03205	COG2807	transmembrane transport
AM477_RS03210	COG0504	CTP synthase activity
AM477_RS03215	COG1683	Conserved Protein
AM477_RS03220	COG3189	MarR family transcriptional regulator
AM477_RS03225	COG3042	response to heat
AM477_RS03230	COG2199	diguanylate cyclase activity
AM477_RS03230	COG2203	Gaf domain
AM477_RS03240	COG3182	Iron-regulated membrane protein
AM477_RS03250	COG1560	Kdo2-lipid A biosynthetic process
AM477_RS03265	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AM477_RS03270	COG3706	GGDEF domain
AM477_RS03275	COG0583	DNA-binding transcription factor activity
AM477_RS03280	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM477_RS03305	COG1294	oxidase, subunit
AM477_RS03310	COG1271	oxidase subunit
AM477_RS03315	COG3546	catalase activity
AM477_RS03320	COG3685	Protein conserved in bacteria
AM477_RS03325	COG3685	Protein conserved in bacteria
AM477_RS03330	COG3729	General stress protein
AM477_RS03335	COG1063	alcohol dehydrogenase
AM477_RS03340	COG3813	Protein conserved in bacteria
AM477_RS03355	COG0640	Transcriptional regulator
AM477_RS03360	COG0538	isocitrate dehydrogenase activity
AM477_RS03365	COG1187	pseudouridine synthase activity
AM477_RS03385	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM477_RS03405	COG2205	protein histidine kinase activity
AM477_RS03410	COG2850	peptidyl-arginine hydroxylation
AM477_RS03430	COG1177	transmembrane transport
AM477_RS03445	COG0318	PFAM AMP-dependent synthetase and ligase
AM477_RS03455	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AM477_RS03465	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM477_RS03475	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM477_RS03485	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AM477_RS03490	COG1388	LysM domain
AM477_RS03490	COG1376	ErfK ybiS ycfS ynhG family protein
AM477_RS03500	COG1309	transcriptional regulator
AM477_RS03510	COG3134	Outer membrane lipoprotein
AM477_RS03515	COG1252	NADH dehydrogenase
AM477_RS03545	COG5633	Lipoprotein
AM477_RS03550	COG0537	adenosine 5'-monophosphoramidase activity
AM477_RS03560	COG0084	hydrolase, TatD family'
AM477_RS03565	COG0470	DNA polymerase III
AM477_RS03575	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AM477_RS03580	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM477_RS03585	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM477_RS03600	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM477_RS03620	COG1399	metal-binding, possibly nucleic acid-binding protein
AM477_RS03635	COG1530	ribonuclease E activity
AM477_RS03640	COG0583	DNA-binding transcription factor activity
AM477_RS03645	COG2814	Major facilitator Superfamily
AM477_RS03665	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM477_RS03715	COG1560	Kdo2-lipid A biosynthetic process
AM477_RS03735	COG5645	(Lipo)protein
AM477_RS03775	COG3381	protein complex oligomerization
AM477_RS03805	COG0583	DNA-binding transcription factor activity
AM477_RS03815	COG1335	isochorismatase
AM477_RS03825	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM477_RS03830	COG1702	phosphate starvation-inducible protein PhoH
AM477_RS03850	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM477_RS03860	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM477_RS03875	COG1309	transcriptional regulator
AM477_RS03910	COG2233	PERMEase
AM477_RS03920	COG3729	General stress protein
AM477_RS03945	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS03955	COG0531	amino acid
AM477_RS03965	COG0174	glutamine synthetase
AM477_RS03970	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AM477_RS03975	COG1396	sequence-specific DNA binding
AM477_RS03975	COG1917	Cupin 2, conserved barrel domain protein
AM477_RS03980	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS03985	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM477_RS03990	COG0583	DNA-binding transcription factor activity
AM477_RS03995	COG0473	3-isopropylmalate dehydrogenase activity
AM477_RS04005	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM477_RS04010	COG4638	Rieske (2fe-2S)
AM477_RS04015	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS04020	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM477_RS04030	COG2200	EAL domain
AM477_RS04035	COG2200	EAL domain
AM477_RS04080	COG3772	lysozyme
AM477_RS04255	COG0305	Participates in initiation and elongation during chromosome replication
AM477_RS04280	COG1396	sequence-specific DNA binding
AM477_RS04335	COG0670	Belongs to the BI1 family
AM477_RS04350	COG2207	Transcriptional regulator
AM477_RS04355	COG1881	PFAM PEBP family protein
AM477_RS04370	COG1832	CoA-binding protein
AM477_RS04380	COG0210	DNA helicase
AM477_RS04385	COG3304	Inner membrane component domain
AM477_RS04390	COG1289	transmembrane transporter activity
AM477_RS04395	COG3070	regulator of competence-specific genes
AM477_RS04420	COG1067	ATP-dependent peptidase activity
AM477_RS04430	COG3130	regulation of translation
AM477_RS04440	COG3009	Protein conserved in bacteria
AM477_RS04445	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM477_RS04445	COG3008	intermembrane lipid transfer
AM477_RS04450	COG2995	paraquat-inducible protein a
AM477_RS04455	COG0488	(ABC) transporter
AM477_RS04465	COG3217	Mosc domain protein beta barrel domain protein
AM477_RS04465	COG0633	Ferredoxin
AM477_RS04480	COG0431	NADPH-dependent FMN reductase
AM477_RS04485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM477_RS04490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS04495	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM477_RS04505	COG0308	aminopeptidase N
AM477_RS04515	COG1473	amidohydrolase
AM477_RS04525	COG0814	amino acid
AM477_RS04535	COG1522	sequence-specific DNA binding
AM477_RS04550	COG1448	Aminotransferase
AM477_RS04555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM477_RS04560	COG3108	Peptidase M15
AM477_RS04570	COG2989	Protein conserved in bacteria
AM477_RS04580	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AM477_RS04590	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM477_RS04595	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM477_RS04600	COG3173	Aminoglycoside phosphotransferase
AM477_RS04615	COG3214	Protein conserved in bacteria
AM477_RS04630	COG0658	competence protein
AM477_RS04630	COG2333	competence protein COMEC
AM477_RS04640	COG0539	negative regulation of cytoplasmic translation
AM477_RS04660	COG2323	membrane
AM477_RS04665	COG1944	ATP diphosphatase activity
AM477_RS04670	COG2116	formate transmembrane transporter activity
AM477_RS04675	COG1882	Formate acetyltransferase
AM477_RS04680	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM477_RS04685	COG0477	Major facilitator Superfamily
AM477_RS04695	COG3302	dmso reductase anchor subunit
AM477_RS04700	COG0437	4 iron, 4 sulfur cluster binding
AM477_RS04705	COG0243	molybdopterin cofactor binding
AM477_RS04715	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AM477_RS04725	COG1674	ftsk spoiiie
AM477_RS04725	COG1178	ABC-type Fe3 transport system permease component
AM477_RS04740	COG0492	ferredoxin-NADP+ reductase activity
AM477_RS04745	COG4988	ABC transporter
AM477_RS04750	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AM477_RS04765	COG0542	response to heat
AM477_RS04775	COG1278	Cold shock
AM477_RS04790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS04795	COG3593	DNA synthesis involved in DNA repair
AM477_RS04805	COG2431	L-lysine efflux transmembrane transporter activity
AM477_RS04815	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM477_RS04825	COG0028	Belongs to the TPP enzyme family
AM477_RS04830	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AM477_RS04835	COG0702	epimerase
AM477_RS04840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM477_RS04845	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM477_RS04850	COG2203	Gaf domain
AM477_RS04850	COG3706	GGDEF domain
AM477_RS04850	COG5001	Diguanylate cyclase
AM477_RS04850	COG4251	negative regulation of phosphorylation
AM477_RS04865	COG1126	abc transporter atp-binding protein
AM477_RS04870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS04875	COG4215	(ABC) transporter
AM477_RS04880	COG4160	amino acid transport
AM477_RS04885	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS04890	COG5002	protein histidine kinase activity
AM477_RS04895	COG0745	RESPONSE REGULATOR receiver
AM477_RS04910	COG1177	transmembrane transport
AM477_RS04915	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM477_RS04920	COG3842	ATPase activity
AM477_RS04925	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM477_RS05110	COG4695	Portal protein
AM477_RS05145	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM477_RS05185	COG3344	reverse transcriptase
AM477_RS05195	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM477_RS05200	COG3226	Transcriptional regulator
AM477_RS05205	COG0738	Major facilitator superfamily
AM477_RS05210	COG0561	phosphatase activity
AM477_RS05215	COG2814	Major facilitator Superfamily
AM477_RS05225	COG0671	phosphoesterase, PA-phosphatase related
AM477_RS05230	COG1349	DNA-binding transcription factor activity
AM477_RS05235	COG1686	Belongs to the peptidase S11 family
AM477_RS05240	COG0625	glutathione transferase activity
AM477_RS05245	COG2133	pyrroloquinoline quinone binding
AM477_RS05255	COG2223	nitrite transmembrane transporter activity
AM477_RS05285	COG0747	negative chemotaxis
AM477_RS05300	COG0303	'Molybdopterin
AM477_RS05305	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM477_RS05310	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM477_RS05315	COG1882	Formate acetyltransferase
AM477_RS05320	COG0561	phosphatase activity
AM477_RS05330	COG1609	Transcriptional regulator
AM477_RS05335	COG2271	Major facilitator Superfamily
AM477_RS05350	COG0488	(ABC) transporter
AM477_RS05355	COG2365	Tyrosine phosphatase family
AM477_RS05360	COG1376	ErfK ybiS ycfS ynhG family protein
AM477_RS05365	COG2188	Transcriptional regulator
AM477_RS05370	COG2723	6-phospho-beta-galactosidase activity
AM477_RS05375	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM477_RS05380	COG1321	iron dependent repressor
AM477_RS05390	COG2194	sulfuric ester hydrolase activity
AM477_RS05395	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM477_RS05410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS05415	COG0765	amino acid transport
AM477_RS05420	COG1126	abc transporter atp-binding protein
AM477_RS05425	COG0668	transmembrane transport
AM477_RS05435	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM477_RS05445	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM477_RS05455	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM477_RS05460	COG1199	ATP-dependent helicase activity
AM477_RS05465	COG0513	Belongs to the DEAD box helicase family
AM477_RS05470	COG3958	Transketolase
AM477_RS05475	COG3959	Transketolase, thiamine diphosphate binding domain
AM477_RS05480	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS05485	COG2271	Major facilitator Superfamily
AM477_RS05490	COG0583	DNA-binding transcription factor activity
AM477_RS05495	COG1309	transcriptional regulator
AM477_RS05500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS05505	COG1131	(ABC) transporter
AM477_RS05510	COG0842	Transport permease protein
AM477_RS05515	COG0842	Transport permease protein
AM477_RS05525	COG3568	Endonuclease Exonuclease Phosphatase
AM477_RS05530	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM477_RS05535	COG0392	lysyltransferase activity
AM477_RS05540	COG0670	Belongs to the BI1 family
AM477_RS05545	COG0314	molybdopterin synthase activity
AM477_RS05550	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AM477_RS05560	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM477_RS05585	COG0745	RESPONSE REGULATOR receiver
AM477_RS05590	COG0642	Histidine kinase
AM477_RS05605	COG3344	reverse transcriptase
AM477_RS05635	COG2226	methyltransferase
AM477_RS05655	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM477_RS05660	COG1881	PFAM PEBP family protein
AM477_RS05695	COG4677	pectinesterase activity
AM477_RS05725	COG0789	Transcriptional regulator
AM477_RS05730	COG2200	EAL domain
AM477_RS05755	COG0561	phosphatase activity
AM477_RS05760	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AM477_RS05765	COG4149	molybdate abc transporter
AM477_RS05770	COG0725	ABC transporter, periplasmic molybdate-binding protein
AM477_RS05780	COG2005	Transcriptional regulator
AM477_RS05780	COG3585	molybdate ion transport
AM477_RS05785	COG1119	ATPase activity
AM477_RS05795	COG1085	galactose-1-phosphate uridylyltransferase
AM477_RS05805	COG2017	converts alpha-aldose to the beta-anomer
AM477_RS05815	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM477_RS05830	COG3201	nicotinamide mononucleotide transporter
AM477_RS05835	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AM477_RS05875	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AM477_RS05880	COG2885	chlorophyll binding
AM477_RS05890	COG3064	Membrane
AM477_RS05895	COG0848	biopolymer transport protein
AM477_RS05900	COG0811	peptide transport
AM477_RS05905	COG0824	Thioesterase
AM477_RS05910	COG3790	cyd operon protein YbgE
AM477_RS05915	COG4890	Cyd operon protein YbgT
AM477_RS05920	COG1294	oxidase, subunit
AM477_RS05925	COG1271	oxidase subunit
AM477_RS05935	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM477_RS05945	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM477_RS05950	COG0567	Dehydrogenase, E1 component
AM477_RS05955	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM477_RS05960	COG1053	succinate dehydrogenase
AM477_RS05965	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AM477_RS05970	COG2009	succinate dehydrogenase
AM477_RS06010	COG1984	allophanate hydrolase subunit 2
AM477_RS06015	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AM477_RS06030	COG0415	Belongs to the DNA photolyase family
AM477_RS06060	COG2205	protein histidine kinase activity
AM477_RS06065	COG0745	RESPONSE REGULATOR receiver
AM477_RS06075	COG0033	Phosphoglucomutase
AM477_RS06085	COG0596	Alpha beta hydrolase
AM477_RS06100	COG0735	belongs to the Fur family
AM477_RS06145	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM477_RS06150	COG1846	Transcriptional regulator
AM477_RS06150	COG1940	carbohydrate kinase activity
AM477_RS06155	COG0647	UMP catabolic process
AM477_RS06160	COG0367	asparagine synthase
AM477_RS06205	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM477_RS06215	COG1702	phosphate starvation-inducible protein PhoH
AM477_RS06225	COG4535	Mg2 and Co2 transporter CorC
AM477_RS06240	COG0765	amino acid transport
AM477_RS06245	COG0765	amino acid transport
AM477_RS06250	COG1126	abc transporter atp-binding protein
AM477_RS06265	COG2888	peptidyl-tyrosine sulfation
AM477_RS06280	COG1466	dna polymerase III delta subunit
AM477_RS06300	COG0799	negative regulation of ribosome biogenesis
AM477_RS06310	COG0768	penicillin binding
AM477_RS06315	COG0772	Belongs to the SEDS family
AM477_RS06320	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM477_RS06325	COG1686	Belongs to the peptidase S11 family
AM477_RS06340	COG0583	DNA-binding transcription factor activity
AM477_RS06355	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM477_RS06375	COG3069	C4-dicarboxylate transmembrane transporter activity
AM477_RS06380	COG3719	Belongs to the RNase T2 family
AM477_RS06385	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM477_RS06405	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM477_RS06410	COG0583	DNA-binding transcription factor activity
AM477_RS06415	COG3969	phosphoadenosine phosphosulfate
AM477_RS06420	COG1475	DNA binding
AM477_RS06425	COG0436	Aminotransferase
AM477_RS06450	COG1129	ABC transporter
AM477_RS06455	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS06460	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS06470	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM477_RS06485	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM477_RS06495	COG0402	S-adenosylhomocysteine deaminase activity
AM477_RS06505	COG0483	inositol monophosphate 1-phosphatase activity
AM477_RS06510	COG2271	Major facilitator Superfamily
AM477_RS06540	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS06545	COG1129	ABC transporter
AM477_RS06550	COG0371	Dehydrogenase
AM477_RS06555	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS06570	COG2879	small protein
AM477_RS06575	COG1966	Carbon starvation protein
AM477_RS06585	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS06590	COG1535	isochorismatase
AM477_RS06590	COG3433	isochorismatase activity
AM477_RS06595	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM477_RS06600	COG1169	isochorismate synthase
AM477_RS06605	COG4592	Periplasmic binding protein
AM477_RS06615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS06620	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS06625	COG1120	ATPase activity
AM477_RS06630	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AM477_RS06630	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM477_RS06635	COG3251	PFAM MbtH domain protein
AM477_RS06640	COG2382	esterase
AM477_RS06650	COG4771	TonB-dependent receptor
AM477_RS06655	COG2977	Belongs to the P-Pant transferase superfamily
AM477_RS06660	COG3958	Transketolase
AM477_RS06665	COG3959	Transketolase, thiamine diphosphate binding domain
AM477_RS06675	COG2390	Transcriptional regulator
AM477_RS06680	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AM477_RS06685	COG1879	ABC-type sugar transport system periplasmic component
AM477_RS06695	COG1129	ABC transporter
AM477_RS06700	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS06710	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS06720	COG0583	DNA-binding transcription factor activity
AM477_RS06725	COG0668	transmembrane transport
AM477_RS06735	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM477_RS06765	COG0747	negative chemotaxis
AM477_RS06770	COG0601	transmembrane transport
AM477_RS06775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM477_RS06780	COG0444	Belongs to the ABC transporter superfamily
AM477_RS06785	COG4608	Belongs to the ABC transporter superfamily
AM477_RS06795	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM477_RS06800	COG4221	oxidoreductase activity
AM477_RS06810	COG4215	(ABC) transporter
AM477_RS06815	COG0765	amino acid transport
AM477_RS06820	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AM477_RS06835	COG0697	spore germination
AM477_RS06845	COG3698	Phosphodiester glycosidase
AM477_RS06850	COG2801	Transposase and inactivated derivatives
AM477_RS06910	COG2315	Protein conserved in bacteria
AM477_RS06915	COG0778	Nitroreductase
AM477_RS06925	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS06935	COG3716	PTS system mannose fructose sorbose family IID component
AM477_RS06940	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM477_RS06945	COG2222	sugar isomerase
AM477_RS06950	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AM477_RS06950	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM477_RS06970	COG0477	Major facilitator Superfamily
AM477_RS06975	COG0668	transmembrane transport
AM477_RS07005	COG3188	usher protein
AM477_RS07020	COG2771	luxR family
AM477_RS07030	COG0673	inositol 2-dehydrogenase activity
AM477_RS07040	COG2211	Major facilitator Superfamily
AM477_RS07045	COG1113	amino acid transport
AM477_RS07060	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS07065	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM477_RS07080	COG0531	amino acid
AM477_RS07130	COG0667	Aldo Keto reductase
AM477_RS07135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS07140	COG1473	amidohydrolase
AM477_RS07165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS07170	COG1120	ATPase activity
AM477_RS07175	COG1566	PFAM secretion protein HlyD family protein
AM477_RS07220	COG4211	Belongs to the binding-protein-dependent transport system permease family
AM477_RS07225	COG1129	ABC transporter
AM477_RS07240	COG0673	inositol 2-dehydrogenase activity
AM477_RS07270	COG3104	oligopeptide transport
AM477_RS07275	COG1982	Orn Lys Arg decarboxylase major
AM477_RS07280	COG0531	amino acid
AM477_RS07290	COG3710	Transcriptional regulator
AM477_RS07300	COG1560	Kdo2-lipid A biosynthetic process
AM477_RS07315	COG3188	usher protein
AM477_RS07320	COG3121	Chaperone
AM477_RS07325	COG3539	Fimbrial protein
AM477_RS07375	COG3344	reverse transcriptase
AM477_RS07560	COG3772	lysozyme
AM477_RS07630	COG0305	Participates in initiation and elongation during chromosome replication
AM477_RS07710	COG0582	viral genome integration into host DNA
AM477_RS07730	COG2501	S4 domain
AM477_RS07740	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM477_RS07760	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AM477_RS07765	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AM477_RS07780	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AM477_RS07785	COG4181	ATPase activity
AM477_RS07790	COG2755	lipolytic protein G-D-S-L family
AM477_RS07795	COG0300	oxidoreductase activity
AM477_RS07800	COG3118	belongs to the thioredoxin family
AM477_RS07810	COG0390	transport system, permease component
AM477_RS07815	COG4619	ABC transporter
AM477_RS07820	COG0330	HflC and HflK could
AM477_RS07825	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM477_RS07840	COG3735	TraB family
AM477_RS07845	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM477_RS07855	COG2223	nitrite transmembrane transporter activity
AM477_RS07860	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM477_RS07860	COG4651	solute:proton antiporter activity
AM477_RS07865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS07905	COG2832	Protein of unknown function (DUF454)
AM477_RS07910	COG3923	Primosomal replication protein n
AM477_RS07920	COG5464	transposase or invertase
AM477_RS07925	COG3264	Mechanosensitive ion channel
AM477_RS07925	COG1196	nuclear chromosome segregation
AM477_RS07930	COG1309	transcriptional regulator
AM477_RS07935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS07940	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM477_RS07955	COG0110	maltose O-acetyltransferase activity
AM477_RS08000	COG1874	Beta-galactosidase
AM477_RS08005	COG3867	Arabinogalactan endo-beta-1,4-galactanase
AM477_RS08010	COG3833	ABC-type maltose transport systems, permease component
AM477_RS08015	COG1175	transmembrane transport
AM477_RS08020	COG2182	Extracellular solute-binding protein
AM477_RS08030	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM477_RS08045	COG2364	Membrane
AM477_RS08075	COG3695	enzyme binding
AM477_RS08080	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AM477_RS08085	COG1946	Acyl-CoA thioesterase
AM477_RS08090	COG0004	ammonium transporteR
AM477_RS08095	COG0347	Belongs to the P(II) protein family
AM477_RS08100	COG1132	(ABC) transporter
AM477_RS08105	COG1132	(ABC) transporter
AM477_RS08110	COG1522	sequence-specific DNA binding
AM477_RS08125	COG4533	DNA binding
AM477_RS08135	COG0824	Thioesterase
AM477_RS08140	COG1555	photosystem II stabilization
AM477_RS08145	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM477_RS08150	COG0776	regulation of translation
AM477_RS08155	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AM477_RS08175	COG0271	Belongs to the BolA IbaG family
AM477_RS08180	COG3056	Lipoprotein
AM477_RS08185	COG2223	nitrite transmembrane transporter activity
AM477_RS08190	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM477_RS08195	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM477_RS08200	COG1845	cytochrome c oxidase, subunit III
AM477_RS08205	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM477_RS08220	COG1414	Transcriptional regulator
AM477_RS08225	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM477_RS08230	COG1053	succinate dehydrogenase
AM477_RS08240	COG1053	succinate dehydrogenase
AM477_RS08255	COG0673	inositol 2-dehydrogenase activity
AM477_RS08260	COG2814	Major facilitator Superfamily
AM477_RS08270	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AM477_RS08275	COG0693	protein deglycase activity
AM477_RS08295	COG0142	geranyltranstransferase activity
AM477_RS08305	COG0667	Aldo Keto reductase
AM477_RS08310	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AM477_RS08330	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM477_RS08330	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM477_RS08340	COG4238	major outer membrane lipoprotein
AM477_RS08360	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM477_RS08365	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM477_RS08370	COG1862	Preprotein translocase
AM477_RS08390	COG0450	alkyl hydroperoxide reductase
AM477_RS08395	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS08410	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS08420	COG1228	amidohydrolase
AM477_RS08430	COG1335	isochorismatase
AM477_RS08435	COG0583	DNA-binding transcription factor activity
AM477_RS08440	COG0366	Alpha amylase catalytic
AM477_RS08465	COG0420	3'-5' exonuclease activity
AM477_RS08470	COG0419	ATPase involved in DNA repair
AM477_RS08475	COG1940	carbohydrate kinase activity
AM477_RS08490	COG4126	flavin adenine dinucleotide binding
AM477_RS08500	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AM477_RS08505	COG3416	Protein conserved in bacteria
AM477_RS08515	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AM477_RS08525	COG1785	Belongs to the alkaline phosphatase family
AM477_RS08565	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AM477_RS08570	COG1335	isochorismatase
AM477_RS08575	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM477_RS08580	COG0113	porphobilinogen synthase activity
AM477_RS08590	COG2175	clavaminate synthase activity
AM477_RS08595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM477_RS08600	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AM477_RS08605	COG4521	taurine ABC transporter
AM477_RS08610	COG2040	homocysteine
AM477_RS08615	COG0833	amino acid
AM477_RS08625	COG4303	Ethanolamine ammonia lyase large subunit
AM477_RS08630	COG4302	ethanolamine ammonia-lyase activity
AM477_RS08660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS08665	COG1126	abc transporter atp-binding protein
AM477_RS08670	COG0765	amino acid transport
AM477_RS08675	COG0765	amino acid transport
AM477_RS08690	COG3188	usher protein
AM477_RS08715	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AM477_RS08725	COG3639	organic phosphonate transmembrane transporter activity
AM477_RS08755	COG0791	NLP P60 protein
AM477_RS08780	COG0582	viral genome integration into host DNA
AM477_RS08785	COG1192	Involved in chromosome partitioning
AM477_RS08845	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AM477_RS08850	COG0022	dehydrogenase e1 component
AM477_RS08855	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM477_RS08860	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM477_RS08885	COG1070	Carbohydrate kinase
AM477_RS08890	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS08895	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM477_RS08900	COG3775	system Galactitol-specific IIC component
AM477_RS08905	COG0625	glutathione transferase activity
AM477_RS08910	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AM477_RS08930	COG0579	oxidoreductase
AM477_RS08935	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS08940	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM477_RS08945	COG1113	amino acid transport
AM477_RS08950	COG1802	Transcriptional regulator
AM477_RS08970	COG2195	Cleaves the N-terminal amino acid of tripeptides
AM477_RS08975	COG0454	-acetyltransferase
AM477_RS08990	COG2991	Protein conserved in bacteria
AM477_RS09005	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM477_RS09010	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM477_RS09030	COG3034	peptidoglycan biosynthetic process
AM477_RS09035	COG0121	glutamine amidotransferase
AM477_RS09045	COG1960	acyl-CoA dehydrogenase activity
AM477_RS09050	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM477_RS09060	COG0583	DNA-binding transcription factor activity
AM477_RS09075	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM477_RS09085	COG2226	methyltransferase
AM477_RS09095	COG1388	LysM domain
AM477_RS09095	COG0741	lytic transglycosylase activity
AM477_RS09100	COG2226	methyltransferase
AM477_RS09110	COG2814	Major facilitator Superfamily
AM477_RS09115	COG0583	DNA-binding transcription factor activity
AM477_RS09120	COG0656	L-ascorbic acid biosynthetic process
AM477_RS09155	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM477_RS09165	COG2011	ABC-type metal ion transport system permease component
AM477_RS09170	COG1464	Belongs to the NlpA lipoprotein family
AM477_RS09180	COG1720	tRNA m6t6A37 methyltransferase activity
AM477_RS09190	COG0791	NLP P60 protein
AM477_RS09195	COG3015	lipoprotein NlpE involved in copper resistance
AM477_RS09200	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM477_RS09215	COG4568	rho-dependent transcription termination
AM477_RS09225	COG0346	lactoylglutathione lyase activity
AM477_RS09230	COG1982	Orn Lys Arg decarboxylase major
AM477_RS09270	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AM477_RS09280	COG0750	zinc metalloprotease
AM477_RS09285	COG0575	Belongs to the CDS family
AM477_RS09300	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AM477_RS09325	COG0024	Methionine aminopeptidase
AM477_RS09330	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AM477_RS09345	COG3835	regulator
AM477_RS09350	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM477_RS09370	COG2860	membrane
AM477_RS09390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS09395	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM477_RS09400	COG1120	ATPase activity
AM477_RS09405	COG4774	siderophore transport
AM477_RS09410	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM477_RS09510	COG1643	Atp-dependent helicase
AM477_RS09515	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AM477_RS09535	COG0617	tRNA 3'-terminal CCA addition
AM477_RS09540	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AM477_RS09560	COG0726	polysaccharide deacetylase
AM477_RS09565	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS09570	COG0842	Transport permease protein
AM477_RS09575	COG1131	(ABC) transporter
AM477_RS09580	COG0288	reversible hydration of carbon dioxide
AM477_RS09590	COG4993	Dehydrogenase
AM477_RS09595	COG2132	Multicopper oxidase
AM477_RS09645	COG3064	Membrane
AM477_RS09660	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM477_RS09665	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM477_RS09670	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AM477_RS09675	COG2186	Transcriptional regulator
AM477_RS09680	COG1113	amino acid transport
AM477_RS09685	COG2211	Major facilitator Superfamily
AM477_RS09690	COG3940	Belongs to the glycosyl hydrolase 43 family
AM477_RS09695	COG3725	Membrane protein required for beta-lactamase induction
AM477_RS09700	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM477_RS09710	COG4969	Belongs to the N-Me-Phe pilin family
AM477_RS09715	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM477_RS09720	COG1459	type II secretion system
AM477_RS09745	COG0494	nUDIX hydrolase
AM477_RS09765	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AM477_RS09770	COG0849	cell division
AM477_RS09795	COG0772	Belongs to the SEDS family
AM477_RS09810	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AM477_RS09815	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM477_RS09820	COG0768	penicillin binding
AM477_RS09845	COG1609	Transcriptional regulator
AM477_RS09855	COG0028	Belongs to the TPP enzyme family
AM477_RS09905	COG0738	Major facilitator superfamily
AM477_RS09915	COG0583	DNA-binding transcription factor activity
AM477_RS09920	COG2271	Major facilitator Superfamily
AM477_RS09925	COG2814	Major facilitator Superfamily
AM477_RS09945	COG1178	ABC-type Fe3 transport system permease component
AM477_RS09955	COG0586	Pfam SNARE associated Golgi protein
AM477_RS09975	COG0235	Class ii aldolase
AM477_RS09980	COG0417	DNA replication proofreading
AM477_RS09990	COG0564	pseudouridine synthase activity
AM477_RS10005	COG3493	citrate carrier protein
AM477_RS10020	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AM477_RS10025	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM477_RS10035	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AM477_RS10090	COG0505	Belongs to the CarA family
AM477_RS10155	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AM477_RS10180	COG1047	Peptidyl-prolyl cis-trans
AM477_RS10195	COG0196	riboflavin kinase activity
AM477_RS10215	COG0583	DNA-binding transcription factor activity
AM477_RS10240	COG4735	regulation of single-species biofilm formation
AM477_RS10245	COG1584	GPR1 FUN34 yaaH family protein
AM477_RS10250	COG0477	Major facilitator Superfamily
AM477_RS10255	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM477_RS10260	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM477_RS10265	COG1115	amino acid carrier protein
AM477_RS10280	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AM477_RS10290	COG0527	aspartate kinase activity
AM477_RS10290	COG0460	homoserine dehydrogenase
AM477_RS10300	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AM477_RS10310	COG0745	RESPONSE REGULATOR receiver
AM477_RS10315	COG4452	Inner membrane protein CreD
AM477_RS10320	COG2205	protein histidine kinase activity
AM477_RS10325	COG0745	RESPONSE REGULATOR receiver
AM477_RS10330	COG3045	CreA protein
AM477_RS10335	COG3708	Transcriptional regulator
AM477_RS10335	COG2207	Transcriptional regulator
AM477_RS10355	COG0741	lytic transglycosylase activity
AM477_RS10365	COG0488	(ABC) transporter
AM477_RS10375	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AM477_RS10380	COG0560	Phosphoserine phosphatase
AM477_RS10390	COG3726	membrane protein affecting hemolysin expression
AM477_RS10420	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM477_RS10425	COG0084	hydrolase, TatD family'
AM477_RS10430	COG4667	esterase of the alpha-beta hydrolase superfamily
AM477_RS10440	COG2823	Periplasmic or secreted lipoprotein
AM477_RS10450	COG1011	Hydrolase
AM477_RS10455	COG0456	acetyltransferase
AM477_RS10460	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AM477_RS10485	COG3706	GGDEF domain
AM477_RS10490	COG4114	ferric iron reductase
AM477_RS10495	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS10495	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS10500	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM477_RS10505	COG2197	response regulator
AM477_RS10510	COG2197	response regulator
AM477_RS10530	COG2966	Psort location CytoplasmicMembrane, score
AM477_RS10545	COG1484	DNA-dependent DNA replication
AM477_RS10560	COG5464	transposase or invertase
AM477_RS10570	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM477_RS10575	COG3716	PTS system mannose fructose sorbose family IID component
AM477_RS10580	COG3715	PTS system
AM477_RS10595	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AM477_RS10595	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM477_RS10605	COG1063	alcohol dehydrogenase
AM477_RS10610	COG1802	Transcriptional regulator
AM477_RS10615	COG2271	Major facilitator Superfamily
AM477_RS10620	COG1214	PFAM Peptidase M22, glycoprotease
AM477_RS10620	COG0456	acetyltransferase
AM477_RS10630	COG1737	Transcriptional regulator
AM477_RS10635	COG0800	Aldolase
AM477_RS10640	COG3734	2-keto-3-deoxy-galactonokinase
AM477_RS10655	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AM477_RS10690	COG1846	Transcriptional regulator
AM477_RS10695	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM477_RS10705	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS10710	COG3384	dioxygenase
AM477_RS10720	COG3971	2-oxopent-4-enoate hydratase activity
AM477_RS10740	COG2368	4-hydroxyphenylacetate
AM477_RS10745	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM477_RS10760	COG1966	Carbon starvation protein
AM477_RS10765	COG2879	small protein
AM477_RS10770	COG0523	cobalamin synthesis protein
AM477_RS10780	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS10785	COG5464	transposase or invertase
AM477_RS10790	COG1917	Cupin 2, conserved barrel domain protein
AM477_RS10790	COG2207	Transcriptional regulator
AM477_RS10800	COG2733	membrane
AM477_RS10815	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AM477_RS10820	COG1924	4 iron, 4 sulfur cluster binding
AM477_RS10835	COG1566	PFAM secretion protein HlyD family protein
AM477_RS10845	COG5457	Domain of unknown function (DUF1127)
AM477_RS10850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM477_RS10860	COG0583	DNA-binding transcription factor activity
AM477_RS10865	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM477_RS10875	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS10880	COG1129	ABC transporter
AM477_RS10885	COG1879	ABC-type sugar transport system periplasmic component
AM477_RS10895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS10900	COG0842	Transport permease protein
AM477_RS10900	COG1129	ABC transporter
AM477_RS10905	COG0842	Transport permease protein
AM477_RS10935	COG2850	peptidyl-arginine hydroxylation
AM477_RS10950	COG5002	protein histidine kinase activity
AM477_RS10955	COG0745	RESPONSE REGULATOR receiver
AM477_RS10965	COG1538	Outer membrane efflux protein
AM477_RS10970	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS10975	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS10980	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM477_RS10990	COG3040	lipid binding
AM477_RS10995	COG0789	Transcriptional regulator
AM477_RS11005	COG0300	oxidoreductase activity
AM477_RS11020	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM477_RS11040	COG3272	Protein of unknown function (DUF1722)
AM477_RS11045	COG4580	involved in the transport of maltose and maltodextrins
AM477_RS11055	COG2211	Major facilitator Superfamily
AM477_RS11060	COG3507	Belongs to the glycosyl hydrolase 43 family
AM477_RS11105	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM477_RS11105	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AM477_RS11170	COG0582	viral genome integration into host DNA
AM477_RS11185	COG0288	reversible hydration of carbon dioxide
AM477_RS11190	COG0659	secondary active sulfate transmembrane transporter activity
AM477_RS11195	COG1064	alcohol dehydrogenase
AM477_RS11200	COG1175	transmembrane transport
AM477_RS11205	COG0395	ABC-type sugar transport system, permease component
AM477_RS11210	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM477_RS11215	COG3842	ATPase activity
AM477_RS11220	COG1653	transport
AM477_RS11230	COG1082	Xylose isomerase domain protein TIM barrel
AM477_RS11240	COG3962	Belongs to the TPP enzyme family
AM477_RS11245	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS11250	COG1737	Transcriptional regulator
AM477_RS11250	COG0837	glucose binding
AM477_RS11270	COG3718	enzyme involved in inositol metabolism
AM477_RS11285	COG0433	COG0433 Predicted ATPase
AM477_RS11290	COG0795	lipopolysaccharide-transporting ATPase activity
AM477_RS11295	COG0795	lipopolysaccharide-transporting ATPase activity
AM477_RS11310	COG2927	DNA polymerase III (CHI subunit)
AM477_RS11315	COG0525	valine-tRNA ligase activity
AM477_RS11340	COG2188	Transcriptional regulator
AM477_RS11345	COG1288	antiporter activity
AM477_RS11350	COG1228	amidohydrolase
AM477_RS11355	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS11360	COG2222	sugar isomerase
AM477_RS11365	COG2731	YhcH YjgK YiaL family protein
AM477_RS11405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS11405	COG1263	PTS System
AM477_RS11410	COG0366	Alpha amylase catalytic
AM477_RS11415	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS11420	COG1486	melibiose metabolic process
AM477_RS11440	COG0602	queuosine metabolic process
AM477_RS11445	COG2026	Addiction module toxin, RelE StbE family
AM477_RS11450	COG3077	Addiction module antitoxin, RelB DinJ family
AM477_RS11455	COG3711	transcriptional antiterminator
AM477_RS11455	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS11460	COG2706	6-phosphogluconolactonase activity
AM477_RS11475	COG3964	amidohydrolase
AM477_RS11510	COG0312	modulator of DNA gyrase
AM477_RS11530	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AM477_RS11540	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS11545	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS11550	COG1129	ABC transporter
AM477_RS11555	COG1879	ABC-type sugar transport system periplasmic component
AM477_RS11575	COG2105	PFAM AIG2 family protein
AM477_RS11580	COG2911	Protein conserved in bacteria
AM477_RS11585	COG0729	surface antigen
AM477_RS11595	COG1253	flavin adenine dinucleotide binding
AM477_RS11610	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM477_RS11625	COG1733	regulation of RNA biosynthetic process
AM477_RS11630	COG0702	epimerase
AM477_RS11640	COG0697	spore germination
AM477_RS11650	COG1113	amino acid transport
AM477_RS11655	COG0545	Peptidyl-prolyl cis-trans isomerase
AM477_RS11660	COG3061	Opacity-associated protein A
AM477_RS11670	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AM477_RS11675	COG2965	DNA replication, synthesis of RNA primer
AM477_RS11735	COG1073	alpha beta
AM477_RS11740	COG3650	response to hydrogen peroxide
AM477_RS11750	COG1960	acyl-CoA dehydrogenase activity
AM477_RS11755	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM477_RS11760	COG0557	exoribonuclease II activity
AM477_RS11775	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AM477_RS11785	COG0330	HflC and HflK could
AM477_RS11790	COG0330	HflC and HflK could
AM477_RS11795	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AM477_RS11815	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM477_RS11820	COG0802	atpase or kinase
AM477_RS11825	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AM477_RS11825	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AM477_RS11830	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM477_RS11855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS11875	COG3264	Mechanosensitive ion channel
AM477_RS11875	COG1511	domain protein
AM477_RS11890	COG1053	succinate dehydrogenase
AM477_RS11895	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM477_RS11915	COG2076	Multidrug Resistance protein
AM477_RS11920	COG5510	response to toxic substance
AM477_RS11935	COG1509	lysine 2,3-aminomutase activity
AM477_RS12015	COG0531	amino acid
AM477_RS12020	COG3030	protein affecting phage T7 exclusion by the F plasmid
AM477_RS12030	COG1027	Aspartate ammonia-lyase
AM477_RS12035	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM477_RS12050	COG1309	transcriptional regulator
AM477_RS12065	COG2801	Transposase and inactivated derivatives
AM477_RS12085	COG0457	Tetratricopeptide repeat
AM477_RS12090	COG1649	PFAM Uncharacterised BCR, COG1649
AM477_RS12090	COG0726	polysaccharide deacetylase
AM477_RS12095	COG1215	transferase activity, transferring glycosyl groups
AM477_RS12115	COG0861	Integral membrane protein TerC family
AM477_RS12135	COG2801	Transposase and inactivated derivatives
AM477_RS12155	COG1486	melibiose metabolic process
AM477_RS12165	COG2169	Transcriptional regulator
AM477_RS12180	COG2824	Alkylphosphonate utilization operon protein PhnA
AM477_RS12185	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AM477_RS12190	COG2188	Transcriptional regulator
AM477_RS12195	COG3624	Phosphonate C-P lyase system protein PhnG
AM477_RS12200	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AM477_RS12205	COG3626	phosphonate metabolism
AM477_RS12210	COG3627	carbon phosphorus lyase activity
AM477_RS12215	COG4107	phosphonate C-P lyase system protein PhnK
AM477_RS12220	COG4778	phosphonate C-P lyase system protein PhnL
AM477_RS12225	COG3454	Phosphonate metabolism
AM477_RS12235	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AM477_RS12245	COG4191	Histidine kinase
AM477_RS12245	COG0784	Response regulator, receiver
AM477_RS12250	COG1129	ABC transporter
AM477_RS12255	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS12290	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM477_RS12295	COG1301	dicarboxylic acid transport
AM477_RS12305	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM477_RS12315	COG3162	membrane
AM477_RS12345	COG3539	Fimbrial protein
AM477_RS12350	COG1346	cytolysis
AM477_RS12355	COG1380	Effector of murein hydrolase LrgA
AM477_RS12360	COG0583	DNA-binding transcription factor activity
AM477_RS12365	COG0025	NhaP-type Na H and K H
AM477_RS12370	COG2252	PERMEase
AM477_RS12380	COG0625	glutathione transferase activity
AM477_RS12385	COG0789	Transcriptional regulator
AM477_RS12395	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM477_RS12430	COG1234	tRNA 3'-trailer cleavage
AM477_RS12435	COG1609	Transcriptional regulator
AM477_RS12440	COG0483	inositol monophosphate 1-phosphatase activity
AM477_RS12455	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM477_RS12475	COG4771	TonB-dependent receptor
AM477_RS12480	COG0741	lytic transglycosylase activity
AM477_RS12495	COG2315	Protein conserved in bacteria
AM477_RS12500	COG0432	Pfam Uncharacterised protein family UPF0047
AM477_RS12515	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM477_RS12520	COG0305	Participates in initiation and elongation during chromosome replication
AM477_RS12535	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM477_RS12545	COG0735	belongs to the Fur family
AM477_RS12550	COG3237	CsbD-like
AM477_RS12555	COG0534	Mate efflux family protein
AM477_RS12565	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AM477_RS12640	COG0251	oxidation-reduction process
AM477_RS12650	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AM477_RS12665	COG0527	aspartate kinase activity
AM477_RS12720	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM477_RS12750	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM477_RS12760	COG0456	acetyltransferase
AM477_RS12800	COG0151	Belongs to the GarS family
AM477_RS12810	COG4191	Histidine kinase
AM477_RS12815	COG3678	ATP-independent chaperone mediated protein folding
AM477_RS12850	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AM477_RS12865	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM477_RS12870	COG2104	thiamine diphosphate biosynthetic process
AM477_RS12890	COG3706	GGDEF domain
AM477_RS12900	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM477_RS12905	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM477_RS12945	COG0250	Participates in transcription elongation, termination and antitermination
AM477_RS12995	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AM477_RS13025	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AM477_RS13035	COG1739	Uncharacterized protein family UPF0029
AM477_RS13080	COG0805	protein transport
AM477_RS13100	COG3165	ubiquinone biosynthetic process from chorismate
AM477_RS13130	COG0583	DNA-binding transcription factor activity
AM477_RS13135	COG0697	spore germination
AM477_RS13140	COG0561	phosphatase activity
AM477_RS13145	COG2267	carboxylic ester hydrolase activity
AM477_RS13150	COG1280	lysine exporter protein (LysE YggA)
AM477_RS13160	COG1280	lysine exporter protein (LysE YggA)
AM477_RS13195	COG0210	DNA helicase
AM477_RS13200	COG1011	Hydrolase
AM477_RS13230	COG3072	Adenylate cyclase
AM477_RS13245	COG2959	enzyme of heme biosynthesis
AM477_RS13250	COG3071	HemY protein
AM477_RS13295	COG2244	polysaccharide biosynthetic process
AM477_RS13300	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AM477_RS13305	COG0456	acetyltransferase
AM477_RS13310	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AM477_RS13315	COG1088	dTDP-glucose 4,6-dehydratase activity
AM477_RS13320	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AM477_RS13325	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AM477_RS13335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AM477_RS13340	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AM477_RS13350	COG3118	belongs to the thioredoxin family
AM477_RS13385	COG1811	Na channel or pump
AM477_RS13395	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM477_RS13400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM477_RS13410	COG0583	DNA-binding transcription factor activity
AM477_RS13415	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM477_RS13430	COG3978	acetolactate synthase activity
AM477_RS13450	COG3085	chromosome segregation
AM477_RS13525	COG0583	DNA-binding transcription factor activity
AM477_RS13550	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AM477_RS13565	COG3443	Belongs to the bacterial solute-binding protein 9 family
AM477_RS13570	COG2207	Transcriptional regulator
AM477_RS13580	COG0371	Dehydrogenase
AM477_RS13585	COG0697	spore germination
AM477_RS13595	COG0583	DNA-binding transcription factor activity
AM477_RS13605	COG0737	Belongs to the 5'-nucleotidase family
AM477_RS13615	COG0527	aspartate kinase activity
AM477_RS13615	COG0460	homoserine dehydrogenase
AM477_RS13620	COG0626	cystathionine gamma-synthase activity
AM477_RS13635	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AM477_RS13640	COG1609	Transcriptional regulator
AM477_RS13645	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM477_RS13660	COG1575	Belongs to the MenA family. Type 1 subfamily
AM477_RS13680	COG3678	ATP-independent chaperone mediated protein folding
AM477_RS13685	COG0745	RESPONSE REGULATOR receiver
AM477_RS13690	COG2205	protein histidine kinase activity
AM477_RS13695	COG2258	MOSC domain
AM477_RS13700	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM477_RS13745	COG1129	ABC transporter
AM477_RS13750	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS13755	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS13760	COG1454	alcohol dehydrogenase
AM477_RS13770	COG2211	Major facilitator Superfamily
AM477_RS13830	COG0205	6-phosphofructokinase activity
AM477_RS13850	COG0243	molybdopterin cofactor binding
AM477_RS13850	COG3383	formate dehydrogenase (NAD+) activity
AM477_RS13855	COG3383	formate dehydrogenase (NAD+) activity
AM477_RS13855	COG0243	molybdopterin cofactor binding
AM477_RS13860	COG0437	4 iron, 4 sulfur cluster binding
AM477_RS13865	COG2864	formate dehydrogenase
AM477_RS13880	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM477_RS13885	COG0657	acetylesterase activity
AM477_RS13890	COG0456	acetyltransferase
AM477_RS13905	COG1011	Hydrolase
AM477_RS13925	COG3852	Histidine kinase
AM477_RS13935	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM477_RS13960	COG0204	Acyl-transferase
AM477_RS13970	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AM477_RS13975	COG3084	Protein conserved in bacteria
AM477_RS13985	COG1763	Mo-molybdopterin cofactor biosynthetic process
AM477_RS14015	COG2186	Transcriptional regulator
AM477_RS14020	COG0477	Major facilitator Superfamily
AM477_RS14025	COG1609	Transcriptional regulator
AM477_RS14030	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS14040	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS14045	COG1129	ABC transporter
AM477_RS14075	COG1522	sequence-specific DNA binding
AM477_RS14080	COG0716	FMN binding
AM477_RS14100	COG3312	ion transport
AM477_RS14150	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM477_RS14155	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM477_RS14160	COG0573	inorganic phosphate transmembrane transporter activity
AM477_RS14165	COG0581	inorganic phosphate transmembrane transporter activity
AM477_RS14170	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AM477_RS14175	COG0704	Plays a role in the regulation of phosphate uptake
AM477_RS14185	COG2382	esterase
AM477_RS14190	COG0363	glucosamine-6-phosphate deaminase activity
AM477_RS14195	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM477_RS14205	COG2252	PERMEase
AM477_RS14210	COG0431	NADPH-dependent FMN reductase
AM477_RS14215	COG2091	lysine biosynthetic process via aminoadipic acid
AM477_RS14245	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AM477_RS14280	COG0187	DNA topoisomerase II activity
AM477_RS14285	COG0561	phosphatase activity
AM477_RS14300	COG2186	Transcriptional regulator
AM477_RS14305	COG3734	2-keto-3-deoxy-galactonokinase
AM477_RS14310	COG0800	Aldolase
AM477_RS14320	COG2271	Major facilitator Superfamily
AM477_RS14325	COG0823	Involved in the tonB-independent uptake of proteins
AM477_RS14330	COG5645	(Lipo)protein
AM477_RS14345	COG3645	SOS response
AM477_RS14355	COG2188	Transcriptional regulator
AM477_RS14370	COG2149	membrane
AM477_RS14390	COG2610	gluconate transmembrane transporter activity
AM477_RS14395	COG0583	DNA-binding transcription factor activity
AM477_RS14400	COG2814	Major facilitator Superfamily
AM477_RS14425	COG0028	Belongs to the TPP enzyme family
AM477_RS14430	COG0440	acetolactate synthase activity
AM477_RS14435	COG2197	response regulator
AM477_RS14445	COG2271	Major facilitator Superfamily
AM477_RS14490	COG2188	Transcriptional regulator
AM477_RS14515	COG4580	involved in the transport of maltose and maltodextrins
AM477_RS14520	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM477_RS14525	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS14525	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS14535	COG1609	Transcriptional regulator
AM477_RS14545	COG3384	dioxygenase
AM477_RS14550	COG0583	DNA-binding transcription factor activity
AM477_RS14555	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AM477_RS14560	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AM477_RS14565	COG2828	Protein conserved in bacteria
AM477_RS14580	COG0697	spore germination
AM477_RS14585	COG1263	PTS System
AM477_RS14585	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS14595	COG2814	Major facilitator Superfamily
AM477_RS14605	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM477_RS14640	COG0583	DNA-binding transcription factor activity
AM477_RS14665	COG1464	Belongs to the NlpA lipoprotein family
AM477_RS14680	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AM477_RS14690	COG1064	alcohol dehydrogenase
AM477_RS14725	COG2211	Major facilitator Superfamily
AM477_RS14730	COG1501	Belongs to the glycosyl hydrolase 31 family
AM477_RS14740	COG1486	melibiose metabolic process
AM477_RS14745	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS14745	COG1263	PTS System
AM477_RS14750	COG2982	Protein involved in outer membrane biogenesis
AM477_RS14755	COG2233	PERMEase
AM477_RS14760	COG0786	glutamate:sodium symporter activity
AM477_RS14775	COG3074	FtsZ-dependent cytokinesis
AM477_RS14780	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AM477_RS14805	COG3152	Membrane
AM477_RS14815	COG1494	fructose-1,6-bisphosphatase
AM477_RS14820	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AM477_RS14825	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM477_RS14830	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM477_RS14850	COG2860	membrane
AM477_RS14860	COG2169	Transcriptional regulator
AM477_RS14860	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM477_RS14865	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AM477_RS14870	COG1561	YicC-like family, N-terminal region
AM477_RS14890	COG1131	(ABC) transporter
AM477_RS14895	COG0842	Transport permease protein
AM477_RS14920	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AM477_RS14955	COG1519	Transferase
AM477_RS14960	COG1216	Glycosyl transferase, family 2
AM477_RS14965	COG0438	transferase activity, transferring glycosyl groups
AM477_RS14975	COG0859	PFAM glycosyl transferase family 9
AM477_RS15000	COG0859	PFAM glycosyl transferase family 9
AM477_RS15015	COG0156	8-amino-7-oxononanoate synthase activity
AM477_RS15025	COG0463	Glycosyl transferase, family 2
AM477_RS15030	COG2861	carbohydrate metabolic process
AM477_RS15035	COG4942	peptidase
AM477_RS15045	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM477_RS15050	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM477_RS15070	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AM477_RS15080	COG2186	Transcriptional regulator
AM477_RS15100	COG3722	fumarate hydratase activity
AM477_RS15120	COG1566	PFAM secretion protein HlyD family protein
AM477_RS15125	COG0625	glutathione transferase activity
AM477_RS15135	COG3276	selenocysteine insertion sequence binding
AM477_RS15140	COG1414	Transcriptional regulator
AM477_RS15145	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM477_RS15150	COG3977	Valine--pyruvate aminotransferase
AM477_RS15155	COG0366	Alpha amylase catalytic
AM477_RS15165	COG2992	FlgJ-related protein
AM477_RS15170	COG1609	Transcriptional regulator
AM477_RS15170	COG2207	Transcriptional regulator
AM477_RS15175	COG4214	carbohydrate transport
AM477_RS15185	COG4213	ABC transporter substrate-binding protein
AM477_RS15205	COG4682	membrane
AM477_RS15210	COG4682	membrane
AM477_RS15215	COG3274	enterobacterial common antigen metabolic process
AM477_RS15255	COG1278	Cold shock
AM477_RS15260	COG2944	sequence-specific DNA binding
AM477_RS15265	COG2814	Major facilitator Superfamily
AM477_RS15285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS15295	COG1609	Transcriptional regulator
AM477_RS15300	COG2885	chlorophyll binding
AM477_RS15305	COG0243	molybdopterin cofactor binding
AM477_RS15310	COG0456	acetyltransferase
AM477_RS15315	COG2818	Glycosylase
AM477_RS15320	COG5571	outer membrane autotransporter
AM477_RS15325	COG2223	nitrite transmembrane transporter activity
AM477_RS15355	COG2801	Transposase and inactivated derivatives
AM477_RS15370	COG0747	negative chemotaxis
AM477_RS15375	COG0601	transmembrane transport
AM477_RS15380	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM477_RS15385	COG0444	Belongs to the ABC transporter superfamily
AM477_RS15390	COG4608	Belongs to the ABC transporter superfamily
AM477_RS15415	COG1215	transferase activity, transferring glycosyl groups
AM477_RS15420	COG0457	Tetratricopeptide repeat
AM477_RS15435	COG2194	sulfuric ester hydrolase activity
AM477_RS15465	COG1215	transferase activity, transferring glycosyl groups
AM477_RS15470	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AM477_RS15475	COG3118	belongs to the thioredoxin family
AM477_RS15475	COG0457	Tetratricopeptide repeat
AM477_RS15480	COG2200	EAL domain
AM477_RS15480	COG2199	diguanylate cyclase activity
AM477_RS15490	COG0612	Peptidase, M16
AM477_RS15505	COG2982	Protein involved in outer membrane biogenesis
AM477_RS15510	COG0477	Major facilitator Superfamily
AM477_RS15515	COG1295	ribonuclease BN
AM477_RS15520	COG0583	DNA-binding transcription factor activity
AM477_RS15525	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS15530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM477_RS15540	COG1454	alcohol dehydrogenase
AM477_RS15550	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM477_RS15555	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AM477_RS15560	COG0671	phosphoesterase, PA-phosphatase related
AM477_RS15580	COG0589	response to stress
AM477_RS15590	COG0306	phosphate transporter
AM477_RS15595	COG2081	HI0933 family
AM477_RS15600	COG2239	Acts as a magnesium transporter
AM477_RS15610	COG1124	(ABC) transporter
AM477_RS15620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM477_RS15625	COG0601	transmembrane transport
AM477_RS15630	COG0747	negative chemotaxis
AM477_RS15640	COG3479	Phenolic acid decarboxylase
AM477_RS15680	COG0628	permease
AM477_RS15685	COG0477	Major facilitator Superfamily
AM477_RS15695	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AM477_RS15710	COG3714	YhhN family
AM477_RS15720	COG3776	membrane
AM477_RS15725	COG0742	ribosomal rna small subunit methyltransferase
AM477_RS15730	COG0552	protein localization to endoplasmic reticulum
AM477_RS15735	COG2884	Cell division ATP-binding protein ftsE
AM477_RS15740	COG2177	Part of the ABC transporter FtsEX involved in
AM477_RS15755	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM477_RS15765	COG0683	leucine binding
AM477_RS15775	COG0683	leucine binding
AM477_RS15780	COG0559	Belongs to the binding-protein-dependent transport system permease family
AM477_RS15830	COG0584	glycerophosphoryl diester phosphodiesterase
AM477_RS15840	COG0405	Gamma-glutamyltransferase
AM477_RS15845	COG1247	-acetyltransferase
AM477_RS15860	COG0673	inositol 2-dehydrogenase activity
AM477_RS15865	COG1741	Belongs to the pirin family
AM477_RS15870	COG1609	Transcriptional regulator
AM477_RS15875	COG3265	gluconokinase activity
AM477_RS15880	COG2610	gluconate transmembrane transporter activity
AM477_RS15890	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM477_RS15915	COG0058	SHG alpha-glucan phosphorylase activity
AM477_RS15930	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM477_RS15945	COG1349	DNA-binding transcription factor activity
AM477_RS15960	COG0058	SHG alpha-glucan phosphorylase activity
AM477_RS15965	COG1640	4-alpha-glucanotransferase
AM477_RS15970	COG2610	gluconate transmembrane transporter activity
AM477_RS15980	COG1040	competence protein
AM477_RS16005	COG1918	ferrous iron import across plasma membrane
AM477_RS16010	COG2183	response to ionizing radiation
AM477_RS16015	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM477_RS16040	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AM477_RS16045	COG1011	Hydrolase
AM477_RS16055	COG0494	nUDIX hydrolase
AM477_RS16060	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AM477_RS16085	COG4796	Type ii and iii secretion system protein
AM477_RS16105	COG3266	domain, Protein
AM477_RS16110	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM477_RS16115	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM477_RS16140	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM477_RS16145	COG0402	S-adenosylhomocysteine deaminase activity
AM477_RS16150	COG0738	Major facilitator superfamily
AM477_RS16175	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM477_RS16180	COG1289	transmembrane transporter activity
AM477_RS16195	COG1765	OsmC-like protein
AM477_RS16200	COG3954	Phosphoribulokinase
AM477_RS16210	COG0429	hydrolase of the alpha beta-hydrolase fold
AM477_RS16220	COG0488	(ABC) transporter
AM477_RS16235	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AM477_RS16240	COG1047	Peptidyl-prolyl cis-trans
AM477_RS16250	COG0545	Peptidyl-prolyl cis-trans isomerase
AM477_RS16255	COG2964	Protein conserved in bacteria
AM477_RS16310	COG0051	transcription antitermination factor activity, RNA binding
AM477_RS16335	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AM477_RS16350	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AM477_RS16415	COG0201	protein transport
AM477_RS16440	COG0202	RNA polymerase activity
AM477_RS16455	COG0789	Transcriptional regulator
AM477_RS16460	COG3036	rescue of stalled ribosome
AM477_RS16490	COG0758	DNA mediated transformation
AM477_RS16500	COG0551	DNA topoisomerase type I activity
AM477_RS16520	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM477_RS16555	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM477_RS16560	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS16565	COG1309	transcriptional regulator
AM477_RS16570	COG0582	viral genome integration into host DNA
AM477_RS16585	COG3561	AntA/AntB antirepressor
AM477_RS16675	COG1802	Transcriptional regulator
AM477_RS16675	COG4626	Terminase
AM477_RS16705	COG4145	pantothenate transmembrane transporter activity
AM477_RS16710	COG3924	membrane
AM477_RS16715	COG0439	Biotin carboxylase
AM477_RS16720	COG0511	ligase activity, forming carbon-carbon bonds
AM477_RS16750	COG2199	diguanylate cyclase activity
AM477_RS16750	COG2200	EAL domain
AM477_RS16760	COG1077	Cell shape determining protein MreB Mrl
AM477_RS16765	COG1792	Involved in formation and maintenance of cell shape
AM477_RS16770	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AM477_RS16780	COG1530	ribonuclease E activity
AM477_RS16785	COG3164	Protein of unknown function
AM477_RS16790	COG0312	modulator of DNA gyrase
AM477_RS16795	COG0583	DNA-binding transcription factor activity
AM477_RS16810	COG1289	transmembrane transporter activity
AM477_RS16815	COG2732	(Barnase) inhibitor
AM477_RS16840	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM477_RS16845	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM477_RS16850	COG3105	Protein conserved in bacteria
AM477_RS16855	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM477_RS16875	COG0625	glutathione transferase activity
AM477_RS16880	COG2969	positive regulation of protein catabolic process
AM477_RS16890	COG0493	'glutamate synthase
AM477_RS16900	COG1242	4 iron, 4 sulfur cluster binding
AM477_RS16905	COG2271	Major facilitator Superfamily
AM477_RS16910	COG1063	alcohol dehydrogenase
AM477_RS16915	COG1312	Catalyzes the dehydration of D-mannonate
AM477_RS16920	COG5002	protein histidine kinase activity
AM477_RS16920	COG2198	Histidine kinase
AM477_RS16920	COG0784	Response regulator, receiver
AM477_RS16925	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AM477_RS16930	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM477_RS16935	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS16945	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS16950	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM477_RS16955	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AM477_RS16960	COG1137	ATPase activity
AM477_RS16965	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AM477_RS16970	COG3117	lipopolysaccharide transmembrane transporter activity
AM477_RS16975	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AM477_RS16985	COG0530	calcium, potassium:sodium antiporter activity
AM477_RS16995	COG1127	ABC transporter
AM477_RS17000	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AM477_RS17005	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM477_RS17010	COG2854	intermembrane phospholipid transfer
AM477_RS17015	COG3113	response to antibiotic
AM477_RS17020	COG5007	Belongs to the BolA IbaG family
AM477_RS17030	COG3423	Transcriptional regulator
AM477_RS17035	COG0142	geranyltranstransferase activity
AM477_RS17050	COG0697	spore germination
AM477_RS17060	COG2027	D-alanyl-D-alanine carboxypeptidase
AM477_RS17070	COG1534	Rna-binding protein
AM477_RS17085	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM477_RS17090	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AM477_RS17100	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM477_RS17140	COG0195	Participates in both transcription termination and antitermination
AM477_RS17185	COG0814	amino acid
AM477_RS17190	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS17195	COG0826	peptidase U32
AM477_RS17200	COG0826	peptidase U32
AM477_RS17205	COG3154	lipid carrier protein
AM477_RS17210	COG3153	acetyltransferase
AM477_RS17225	COG0693	protein deglycase activity
AM477_RS17230	COG0702	epimerase
AM477_RS17235	COG0701	Predicted permease
AM477_RS17240	COG2823	Periplasmic or secreted lipoprotein
AM477_RS17260	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AM477_RS17275	COG1063	alcohol dehydrogenase
AM477_RS17280	COG3775	system Galactitol-specific IIC component
AM477_RS17285	COG3414	Phosphotransferase system galactitol-specific IIB component
AM477_RS17290	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS17300	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS17300	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS17305	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS17305	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS17305	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS17310	COG1105	Belongs to the carbohydrate kinase PfkB family
AM477_RS17320	COG1349	DNA-binding transcription factor activity
AM477_RS17325	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS17330	COG2721	sulfolactate sulfo-lyase activity
AM477_RS17335	COG2271	Major facilitator Superfamily
AM477_RS17345	COG2084	Dehydrogenase
AM477_RS17350	COG1929	Belongs to the glycerate kinase type-1 family
AM477_RS17370	COG1741	Belongs to the pirin family
AM477_RS17375	COG0583	DNA-binding transcription factor activity
AM477_RS17380	COG3152	Membrane
AM477_RS17385	COG0435	Glutathione S-transferase
AM477_RS17390	COG2259	Doxx family
AM477_RS17400	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AM477_RS17405	COG4575	ribosome binding
AM477_RS17410	COG1422	Protein of unknown function (DUF1090)
AM477_RS17420	COG0586	Pfam SNARE associated Golgi protein
AM477_RS17425	COG2186	Transcriptional regulator
AM477_RS17430	COG2271	Major facilitator Superfamily
AM477_RS17440	COG2721	sulfolactate sulfo-lyase activity
AM477_RS17455	COG0861	Integral membrane protein TerC family
AM477_RS17460	COG0673	inositol 2-dehydrogenase activity
AM477_RS17465	COG1451	nucleotide metabolic process
AM477_RS17485	COG0446	pyridine nucleotide-disulphide oxidoreductase
AM477_RS17485	COG1902	pentaerythritol trinitrate reductase activity
AM477_RS17540	COG1695	Transcriptional regulator
AM477_RS17545	COG2375	cellular response to nickel ion
AM477_RS17560	COG1461	Dihydroxyacetone kinase
AM477_RS17565	COG2376	Dihydroxyacetone kinase
AM477_RS17650	COG3247	response to pH
AM477_RS17660	COG2205	protein histidine kinase activity
AM477_RS17660	COG2198	Histidine kinase
AM477_RS17660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS17660	COG0784	Response regulator, receiver
AM477_RS17665	COG2197	response regulator
AM477_RS17690	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM477_RS17695	COG0358	DNA primase activity
AM477_RS17700	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AM477_RS17765	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM477_RS17780	COG4991	sh3 domain protein
AM477_RS17785	COG3025	triphosphatase activity
AM477_RS17805	COG2960	long-chain fatty acid transporting porin activity
AM477_RS17820	COG3384	dioxygenase
AM477_RS17825	COG0754	glutathionylspermidine amidase activity
AM477_RS17840	COG0494	nUDIX hydrolase
AM477_RS17845	COG3151	Protein conserved in bacteria
AM477_RS17850	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM477_RS17855	COG3150	esterase
AM477_RS17865	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AM477_RS17870	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM477_RS17875	COG0642	Histidine kinase
AM477_RS17885	COG3111	PFAM Bacterial OB fold (BOF) protein
AM477_RS17890	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM477_RS17895	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM477_RS17900	COG0204	Acyl-transferase
AM477_RS17905	COG2132	Multicopper oxidase
AM477_RS17910	COG1032	radical SAM domain protein
AM477_RS17920	COG0656	L-ascorbic acid biosynthetic process
AM477_RS17925	COG1979	alcohol dehydrogenase
AM477_RS17930	COG2207	Transcriptional regulator
AM477_RS17935	COG0586	Pfam SNARE associated Golgi protein
AM477_RS17940	COG0626	cystathionine gamma-synthase activity
AM477_RS17955	COG0848	biopolymer transport protein
AM477_RS17960	COG2211	Major facilitator Superfamily
AM477_RS17985	COG0625	glutathione transferase activity
AM477_RS17995	COG0754	glutathionylspermidine amidase activity
AM477_RS18000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM477_RS18020	COG0583	DNA-binding transcription factor activity
AM477_RS18025	COG0626	cystathionine gamma-synthase activity
AM477_RS18285	COG3423	Transcriptional regulator
AM477_RS18295	COG1278	Cold shock
AM477_RS18300	COG3423	Transcriptional regulator
AM477_RS18360	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM477_RS18370	COG1811	Na channel or pump
AM477_RS18380	COG1982	Orn Lys Arg decarboxylase major
AM477_RS18385	COG2211	Major facilitator Superfamily
AM477_RS18400	COG1194	a g-specific adenine glycosylase
AM477_RS18410	COG3171	Protein conserved in bacteria
AM477_RS18420	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM477_RS18435	COG0762	integral membrane protein
AM477_RS18440	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AM477_RS18445	COG2805	Type II/IV secretion system protein
AM477_RS18465	COG0189	ligase activity
AM477_RS18470	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AM477_RS18475	COG2356	endonuclease I
AM477_RS18485	COG2814	Major facilitator Superfamily
AM477_RS18520	COG2146	nitrite reductase [NAD(P)H] activity
AM477_RS18535	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS18540	COG1414	Transcriptional regulator
AM477_RS18570	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS18575	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
AM477_RS18595	COG0501	Belongs to the peptidase M48B family
AM477_RS18600	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM477_RS18615	COG0191	fructose-bisphosphate aldolase activity
AM477_RS18620	COG0668	transmembrane transport
AM477_RS18630	COG2968	Membrane
AM477_RS18645	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM477_RS18650	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AM477_RS18670	COG0006	proline dipeptidase activity
AM477_RS18675	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM477_RS18680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM477_RS18700	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS18705	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM477_RS18725	COG2723	6-phospho-beta-galactosidase activity
AM477_RS18730	COG1737	Transcriptional regulator
AM477_RS18740	COG1272	protein, Hemolysin III
AM477_RS18750	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AM477_RS18760	COG0716	FMN binding
AM477_RS18765	COG4974	Belongs to the 'phage' integrase family
AM477_RS18775	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AM477_RS18800	COG4942	peptidase
AM477_RS18810	COG2814	Major facilitator Superfamily
AM477_RS18825	COG0667	Aldo Keto reductase
AM477_RS18860	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM477_RS18865	COG1393	Belongs to the ArsC family
AM477_RS18880	COG1538	Outer membrane efflux protein
AM477_RS18885	COG1289	transmembrane transporter activity
AM477_RS18900	COG3592	Divergent 4Fe-4S mono-cluster
AM477_RS18905	COG2388	GCN5-related N-acetyl-transferase
AM477_RS18915	COG3539	Fimbrial protein
AM477_RS18920	COG3539	Fimbrial protein
AM477_RS18925	COG3539	Fimbrial protein
AM477_RS18930	COG3188	usher protein
AM477_RS18935	COG3121	Chaperone
AM477_RS18940	COG3539	Fimbrial protein
AM477_RS18950	COG4974	Belongs to the 'phage' integrase family
AM477_RS18955	COG0582	viral genome integration into host DNA
AM477_RS18970	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM477_RS18975	COG1846	Transcriptional regulator
AM477_RS18980	COG0697	spore germination
AM477_RS19030	COG0667	Aldo Keto reductase
AM477_RS19035	COG0814	amino acid
AM477_RS19050	COG0183	Belongs to the thiolase family
AM477_RS19060	COG0823	Involved in the tonB-independent uptake of proteins
AM477_RS19065	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS19070	COG2814	Major facilitator Superfamily
AM477_RS19100	COG3842	ATPase activity
AM477_RS19105	COG0395	ABC-type sugar transport system, permease component
AM477_RS19110	COG1175	transmembrane transport
AM477_RS19115	COG1917	Cupin 2, conserved barrel domain protein
AM477_RS19120	COG1794	racemase activity, acting on amino acids and derivatives
AM477_RS19125	COG0583	DNA-binding transcription factor activity
AM477_RS19135	COG1609	Transcriptional regulator
AM477_RS19140	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS19145	COG2723	6-phospho-beta-galactosidase activity
AM477_RS19150	COG2186	Transcriptional regulator
AM477_RS19160	COG1609	Transcriptional regulator
AM477_RS19185	COG0667	Aldo Keto reductase
AM477_RS19195	COG0861	Integral membrane protein TerC family
AM477_RS19225	COG2165	general secretion pathway protein
AM477_RS19230	COG4795	General secretion pathway protein
AM477_RS19240	COG4967	type IV pilus modification protein PilV
AM477_RS19245	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AM477_RS19250	COG1025	Belongs to the peptidase M16 family
AM477_RS19255	COG1074	ATP-dependent DNA helicase activity
AM477_RS19260	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AM477_RS19270	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AM477_RS19270	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AM477_RS19275	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM477_RS19280	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AM477_RS19310	COG4656	Part of a membrane complex involved in electron transport
AM477_RS19315	COG1454	alcohol dehydrogenase
AM477_RS19315	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS19345	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM477_RS19510	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AM477_RS19515	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AM477_RS19520	COG2166	iron-sulfur cluster assembly
AM477_RS19525	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AM477_RS19535	COG0583	DNA-binding transcription factor activity
AM477_RS19540	COG2363	Small membrane protein
AM477_RS19550	COG1349	DNA-binding transcription factor activity
AM477_RS19570	COG0738	Major facilitator superfamily
AM477_RS19575	COG0235	Class ii aldolase
AM477_RS19580	COG1454	alcohol dehydrogenase
AM477_RS19595	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS19610	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AM477_RS19615	COG2011	ABC-type metal ion transport system permease component
AM477_RS19620	COG1464	Belongs to the NlpA lipoprotein family
AM477_RS19630	COG0477	Major facilitator Superfamily
AM477_RS19640	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM477_RS19645	COG1760	l-serine dehydratase
AM477_RS19650	COG0814	amino acid
AM477_RS19655	COG1611	Belongs to the LOG family
AM477_RS19670	COG3098	single-species biofilm formation
AM477_RS19675	COG0564	pseudouridine synthase activity
AM477_RS19680	COG0716	FMN binding
AM477_RS19685	COG2271	Major facilitator Superfamily
AM477_RS19690	COG4948	Mandelate Racemase Muconate Lactonizing
AM477_RS19695	COG4948	Mandelate Racemase Muconate Lactonizing
AM477_RS19700	COG1929	Belongs to the glycerate kinase type-1 family
AM477_RS19705	COG4999	Histidine kinase
AM477_RS19705	COG2205	protein histidine kinase activity
AM477_RS19705	COG3850	Histidine kinase
AM477_RS19705	COG3437	response regulator, receiver
AM477_RS19715	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM477_RS19720	COG3956	TIGRFAM MazG family protein
AM477_RS19740	COG0602	queuosine metabolic process
AM477_RS19745	COG0720	synthase
AM477_RS19765	COG2234	aminopeptidase activity
AM477_RS19825	COG4942	peptidase
AM477_RS19825	COG1388	LysM domain
AM477_RS19830	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM477_RS19855	COG0163	prenyltransferase activity
AM477_RS19860	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM477_RS19900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS19905	COG4558	Periplasmic binding protein
AM477_RS19910	COG3720	iron ion transport
AM477_RS19930	COG0679	Auxin Efflux Carrier
AM477_RS19945	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM477_RS19950	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM477_RS19955	COG1121	(ABC) transporter
AM477_RS19960	COG0803	Belongs to the bacterial solute-binding protein 9 family
AM477_RS19965	COG1609	Transcriptional regulator
AM477_RS19970	COG1940	carbohydrate kinase activity
AM477_RS19975	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM477_RS19980	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS19985	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS19990	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM477_RS19995	COG4580	involved in the transport of maltose and maltodextrins
AM477_RS20005	COG2723	6-phospho-beta-galactosidase activity
AM477_RS20015	COG0309	Hydrogenase expression formation protein (HypE)
AM477_RS20020	COG0409	Hydrogenase expression formation protein
AM477_RS20025	COG0298	carbon dioxide binding
AM477_RS20030	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AM477_RS20050	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM477_RS20055	COG0651	ATP synthesis coupled electron transport
AM477_RS20060	COG0650	Formate hydrogenlyase subunit 4
AM477_RS20065	COG3261	NADH dehydrogenase
AM477_RS20065	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM477_RS20070	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM477_RS20075	COG3260	NADH ubiquinone oxidoreductase 20
AM477_RS20085	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM477_RS20095	COG2723	6-phospho-beta-galactosidase activity
AM477_RS20100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS20100	COG1263	PTS System
AM477_RS20105	COG1609	Transcriptional regulator
AM477_RS20110	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM477_RS20115	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AM477_RS20120	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
AM477_RS20150	COG1349	DNA-binding transcription factor activity
AM477_RS20155	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS20160	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS20170	COG3732	PTS system glucitol sorbitol-specific
AM477_RS20175	COG3730	PTS system glucitol sorbitol-specific
AM477_RS20180	COG2951	lytic endotransglycosylase activity
AM477_RS20185	COG1121	(ABC) transporter
AM477_RS20190	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM477_RS20195	COG0803	Belongs to the bacterial solute-binding protein 9 family
AM477_RS20200	COG1546	Belongs to the CinA family
AM477_RS20225	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AM477_RS20255	COG2823	Periplasmic or secreted lipoprotein
AM477_RS20260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM477_RS20265	COG1238	metal cluster binding
AM477_RS20285	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AM477_RS20290	COG2814	Major facilitator Superfamily
AM477_RS20295	COG1566	PFAM secretion protein HlyD family protein
AM477_RS20300	COG1846	Transcriptional regulator
AM477_RS20310	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM477_RS20320	COG4176	ABC-type proline glycine betaine transport system permease component
AM477_RS20335	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM477_RS20345	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM477_RS20350	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM477_RS20355	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM477_RS20360	COG4575	ribosome binding
AM477_RS20380	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM477_RS20395	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM477_RS20400	COG0640	Transcriptional regulator
AM477_RS20410	COG0583	DNA-binding transcription factor activity
AM477_RS20415	COG3284	Transcriptional regulator
AM477_RS20425	COG3539	Fimbrial protein
AM477_RS20430	COG3121	Chaperone
AM477_RS20450	COG3188	usher protein
AM477_RS20460	COG3539	Fimbrial protein
AM477_RS20465	COG2197	response regulator
AM477_RS20480	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS20490	COG0235	Class ii aldolase
AM477_RS20500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS20535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS20540	COG3708	Transcriptional regulator
AM477_RS20540	COG2207	Transcriptional regulator
AM477_RS20570	COG2867	negative regulation of translational initiation
AM477_RS20585	COG0497	DNA recombination
AM477_RS20605	COG4536	flavin adenine dinucleotide binding
AM477_RS20610	COG4137	Cytochrome C assembly protein
AM477_RS20615	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AM477_RS20650	COG2885	chlorophyll binding
AM477_RS20655	COG2199	diguanylate cyclase activity
AM477_RS20665	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM477_RS20670	COG1605	Chorismate mutase
AM477_RS20670	COG0287	Prephenate dehydrogenase
AM477_RS20680	COG1605	Chorismate mutase
AM477_RS20680	COG0077	Prephenate dehydratase
AM477_RS20685	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM477_RS20690	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM477_RS20705	COG0542	response to heat
AM477_RS20730	COG0477	Major facilitator Superfamily
AM477_RS20735	COG5544	Lipoprotein
AM477_RS20740	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM477_RS20750	COG3148	PFAM DTW domain containing protein
AM477_RS20755	COG3118	belongs to the thioredoxin family
AM477_RS20760	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM477_RS20775	COG0513	Belongs to the DEAD box helicase family
AM477_RS20785	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AM477_RS20795	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AM477_RS20800	COG3026	antisigma factor binding
AM477_RS20805	COG3086	response to oxidative stress
AM477_RS20815	COG0681	Belongs to the peptidase S26 family
AM477_RS20835	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AM477_RS20845	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM477_RS20850	COG1737	Transcriptional regulator
AM477_RS20855	COG0560	Phosphoserine phosphatase
AM477_RS20870	COG0047	phosphoribosylformylglycinamidine synthase activity
AM477_RS20870	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AM477_RS20875	COG2205	protein histidine kinase activity
AM477_RS20880	COG3170	Tfp pilus assembly protein FimV
AM477_RS20885	COG2204	response regulator
AM477_RS20890	COG0347	Belongs to the P(II) protein family
AM477_RS20895	COG1017	nitric oxide dioxygenase activity
AM477_RS20895	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM477_RS20910	COG2259	Doxx family
AM477_RS20915	COG1940	carbohydrate kinase activity
AM477_RS20920	COG0457	Tetratricopeptide repeat
AM477_RS20925	COG0477	Major facilitator Superfamily
AM477_RS20925	COG2814	Major facilitator Superfamily
AM477_RS20930	COG2017	converts alpha-aldose to the beta-anomer
AM477_RS20935	COG2814	Major facilitator Superfamily
AM477_RS20940	COG3711	transcriptional antiterminator
AM477_RS20945	COG3683	transport system, periplasmic component
AM477_RS20950	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM477_RS20980	COG0822	iron-sulfur transferase activity
AM477_RS21000	COG0633	Ferredoxin
AM477_RS21005	COG2975	iron-sulfur cluster assembly
AM477_RS21025	COG2897	thiosulfate sulfurtransferase activity
AM477_RS21030	COG2373	Large extracellular alpha-helical protein
AM477_RS21035	COG4953	penicillin-binding protein 1C
AM477_RS21065	COG2976	Protein conserved in bacteria
AM477_RS21085	COG1645	bacterial-type flagellum-dependent swarming motility
AM477_RS21095	COG0516	GMP reductase activity
AM477_RS21095	COG0517	IMP dehydrogenase activity
AM477_RS21105	COG3119	arylsulfatase activity
AM477_RS21110	COG0641	radical SAM
AM477_RS21130	COG2200	EAL domain
AM477_RS21145	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AM477_RS21160	COG2723	6-phospho-beta-galactosidase activity
AM477_RS21170	COG2233	PERMEase
AM477_RS21185	COG1393	Belongs to the ArsC family
AM477_RS21190	COG4783	chaperone-mediated protein folding
AM477_RS21195	COG0628	permease
AM477_RS21200	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AM477_RS21205	COG2716	regulation of RNA biosynthetic process
AM477_RS21215	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AM477_RS21225	COG2321	neutral zinc metallopeptidase
AM477_RS21230	COG1444	tRNA N-acetyltransferase activity
AM477_RS21235	COG0400	carboxylic ester hydrolase activity
AM477_RS21250	COG1393	Belongs to the ArsC family
AM477_RS21255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM477_RS21265	COG0493	'glutamate synthase
AM477_RS21265	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM477_RS21275	COG5342	invasion associated locus B
AM477_RS21280	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM477_RS21285	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM477_RS21295	COG4810	utilization protein
AM477_RS21385	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM477_RS21405	COG2837	iron assimilation
AM477_RS21415	COG4150	thiosulfate binding
AM477_RS21420	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AM477_RS21425	COG4208	sulfate ABC transporter
AM477_RS21430	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AM477_RS21440	COG4319	ketosteroid isomerase
AM477_RS21475	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM477_RS21495	COG3530	Putative quorum-sensing-regulated virulence factor
AM477_RS21500	COG0385	Bile acid
AM477_RS21505	COG0583	DNA-binding transcription factor activity
AM477_RS21535	COG3415	Transposase
AM477_RS21540	COG3415	Transposase
AM477_RS21560	COG2199	diguanylate cyclase activity
AM477_RS21560	COG2200	EAL domain
AM477_RS21565	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM477_RS21580	COG0667	Aldo Keto reductase
AM477_RS21585	COG3961	Belongs to the TPP enzyme family
AM477_RS21600	COG3279	Response regulator of the LytR AlgR family
AM477_RS21605	COG3275	phosphorelay sensor kinase activity
AM477_RS21615	COG0436	Aminotransferase
AM477_RS21620	COG2807	transmembrane transport
AM477_RS21625	COG0590	tRNA wobble adenosine to inosine editing
AM477_RS21630	COG0583	DNA-binding transcription factor activity
AM477_RS21650	COG2116	formate transmembrane transporter activity
AM477_RS21655	COG2853	Lipoprotein
AM477_RS21665	COG3691	Protein conserved in bacteria
AM477_RS21680	COG2062	phosphohistidine phosphatase, SixA
AM477_RS21705	COG0730	response to heat
AM477_RS21710	COG3101	peptidyl-lysine hydroxylation
AM477_RS21725	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM477_RS21745	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM477_RS21755	COG0586	Pfam SNARE associated Golgi protein
AM477_RS21765	COG0285	dihydrofolate synthase activity
AM477_RS21770	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AM477_RS21775	COG1286	toxin biosynthetic process
AM477_RS21780	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AM477_RS21785	COG0163	prenyltransferase activity
AM477_RS21805	COG4160	amino acid transport
AM477_RS21810	COG4598	ABC transporter
AM477_RS21820	COG1090	epimerase
AM477_RS21825	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM477_RS21830	COG0625	glutathione transferase activity
AM477_RS21835	COG0625	glutathione transferase activity
AM477_RS21840	COG0622	Phosphoesterase
AM477_RS21845	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AM477_RS21850	COG0280	phosphate acetyltransferase
AM477_RS21850	COG0857	belongs to the CobB CobQ family
AM477_RS21870	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM477_RS21875	COG0490	domain, Protein
AM477_RS21875	COG0471	metal ion transport
AM477_RS21885	COG0436	Aminotransferase
AM477_RS21890	COG0583	DNA-binding transcription factor activity
AM477_RS21940	COG0839	Belongs to the complex I subunit 6 family
AM477_RS21950	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM477_RS21955	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM477_RS21970	COG2153	protein acetylation
AM477_RS21975	COG1169	isochorismate synthase
AM477_RS22000	COG0318	PFAM AMP-dependent synthetase and ligase
AM477_RS22010	COG5464	transposase or invertase
AM477_RS22025	COG1414	Transcriptional regulator
AM477_RS22035	COG2271	Major facilitator Superfamily
AM477_RS22045	COG0247	lactate metabolic process
AM477_RS22055	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM477_RS22060	COG2271	Major facilitator Superfamily
AM477_RS22065	COG0584	glycerophosphoryl diester phosphodiesterase
AM477_RS22075	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM477_RS22105	COG0784	Response regulator, receiver
AM477_RS22105	COG2205	protein histidine kinase activity
AM477_RS22115	COG2198	Histidine kinase
AM477_RS22115	COG0642	Histidine kinase
AM477_RS22130	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM477_RS22130	COG2169	Transcriptional regulator
AM477_RS22135	COG3145	DNA-N1-methyladenine dioxygenase activity
AM477_RS22140	COG4615	Cyclic peptide transporter
AM477_RS22145	COG2239	Acts as a magnesium transporter
AM477_RS22150	COG0659	secondary active sulfate transmembrane transporter activity
AM477_RS22165	COG0628	permease
AM477_RS22190	COG1349	DNA-binding transcription factor activity
AM477_RS22195	COG0494	nUDIX hydrolase
AM477_RS22215	COG1061	Type III restriction enzyme res subunit
AM477_RS22220	COG1187	pseudouridine synthase activity
AM477_RS22225	COG2814	Major facilitator Superfamily
AM477_RS22235	COG4172	Belongs to the ABC transporter superfamily
AM477_RS22240	COG4239	(ABC) transporter, permease
AM477_RS22245	COG4174	ABC transporter (Permease)
AM477_RS22250	COG4166	transmembrane transport
AM477_RS22255	COG2200	EAL domain
AM477_RS22260	COG0791	NLP P60 protein
AM477_RS22265	COG0671	phosphoesterase, PA-phosphatase related
AM477_RS22270	COG0523	cobalamin synthesis protein
AM477_RS22275	COG0246	Mannitol dehydrogenase
AM477_RS22280	COG1312	Catalyzes the dehydration of D-mannonate
AM477_RS22310	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS22310	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS22315	COG1105	Belongs to the carbohydrate kinase PfkB family
AM477_RS22320	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS22320	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS22320	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM477_RS22330	COG2855	membrane
AM477_RS22340	COG0583	DNA-binding transcription factor activity
AM477_RS22345	COG0833	amino acid
AM477_RS22355	COG4771	TonB-dependent receptor
AM477_RS22370	COG2311	Membrane
AM477_RS22385	COG1129	ABC transporter
AM477_RS22395	COG2949	membrane
AM477_RS22405	COG1346	cytolysis
AM477_RS22415	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM477_RS22420	COG3659	wide pore channel activity
AM477_RS22435	COG2723	6-phospho-beta-galactosidase activity
AM477_RS22440	COG1538	Outer membrane efflux protein
AM477_RS22445	COG0586	Pfam SNARE associated Golgi protein
AM477_RS22455	COG1686	Belongs to the peptidase S11 family
AM477_RS22465	COG0277	FAD linked oxidase domain protein
AM477_RS22470	COG1472	Belongs to the glycosyl hydrolase 3 family
AM477_RS22475	COG1732	Glycine betaine
AM477_RS22480	COG1174	glycine betaine transport
AM477_RS22485	COG1125	glycine betaine transport
AM477_RS22490	COG1174	glycine betaine transport
AM477_RS22500	COG3275	phosphorelay sensor kinase activity
AM477_RS22510	COG4807	Protein conserved in bacteria
AM477_RS22530	COG5455	response to cobalt ion
AM477_RS22535	COG0583	DNA-binding transcription factor activity
AM477_RS22540	COG2252	PERMEase
AM477_RS22550	COG0583	DNA-binding transcription factor activity
AM477_RS22565	COG0351	phosphomethylpyrimidine kinase
AM477_RS22570	COG1830	Aldolase
AM477_RS22580	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AM477_RS22605	COG1070	Carbohydrate kinase
AM477_RS22615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM477_RS22620	COG4948	Mandelate Racemase Muconate Lactonizing
AM477_RS22625	COG0747	negative chemotaxis
AM477_RS22630	COG0601	transmembrane transport
AM477_RS22635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM477_RS22640	COG0444	Belongs to the ABC transporter superfamily
AM477_RS22645	COG4608	Belongs to the ABC transporter superfamily
AM477_RS22655	COG0826	peptidase U32
AM477_RS22660	COG0745	RESPONSE REGULATOR receiver
AM477_RS22665	COG2205	protein histidine kinase activity
AM477_RS22690	COG1301	dicarboxylic acid transport
AM477_RS22715	COG5002	protein histidine kinase activity
AM477_RS22720	COG0443	Heat shock 70 kDa protein
AM477_RS22725	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AM477_RS22740	COG2982	Protein involved in outer membrane biogenesis
AM477_RS22745	COG1253	flavin adenine dinucleotide binding
AM477_RS22780	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AM477_RS22800	COG1215	transferase activity, transferring glycosyl groups
AM477_RS22840	COG2244	polysaccharide biosynthetic process
AM477_RS22845	COG1216	Glycosyl transferase, family 2
AM477_RS22845	COG1442	glycosyl transferase family 8
AM477_RS22905	COG0438	transferase activity, transferring glycosyl groups
AM477_RS22910	COG1442	glycosyl transferase family 8
AM477_RS22910	COG1216	Glycosyl transferase, family 2
AM477_RS22930	COG0463	Glycosyl transferase, family 2
AM477_RS22955	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AM477_RS22980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM477_RS22985	COG0583	DNA-binding transcription factor activity
AM477_RS22990	COG0531	amino acid
AM477_RS22995	COG0640	Transcriptional regulator
AM477_RS23000	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AM477_RS23005	COG2801	Transposase and inactivated derivatives
AM477_RS23015	COG2925	Exonuclease
AM477_RS23030	COG3344	reverse transcriptase
AM477_RS23040	COG1289	transmembrane transporter activity
AM477_RS23060	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AM477_RS23070	COG1942	4-Oxalocrotonate Tautomerase
AM477_RS23075	COG0583	DNA-binding transcription factor activity
AM477_RS23080	COG0095	Lipoate-protein ligase
AM477_RS23085	COG0477	Major facilitator Superfamily
AM477_RS23100	COG5001	Diguanylate cyclase
AM477_RS23100	COG3300	MHYT domain
AM477_RS23110	COG3615	Tellurite resistance protein tehB
AM477_RS23135	COG3706	GGDEF domain
AM477_RS23180	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM477_RS23285	COG0582	viral genome integration into host DNA
AM477_RS23295	COG0534	Mate efflux family protein
AM477_RS23305	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AM477_RS23325	COG0604	alcohol dehydrogenase
AM477_RS23330	COG1309	transcriptional regulator
AM477_RS23335	COG0025	NhaP-type Na H and K H
AM477_RS23370	COG0251	oxidation-reduction process
AM477_RS23390	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM477_RS23400	COG1418	mRNA catabolic process
AM477_RS23405	COG0270	DNA (cytosine-5-)-methyltransferase activity
AM477_RS23410	COG3727	T/G mismatch-specific endonuclease activity
AM477_RS23415	COG0697	spore germination
AM477_RS23420	COG2354	Protein conserved in bacteria
AM477_RS23450	COG0366	Alpha amylase catalytic
AM477_RS23455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS23465	COG0765	amino acid transport
AM477_RS23470	COG1126	abc transporter atp-binding protein
AM477_RS23475	COG2197	response regulator
AM477_RS23485	COG2197	response regulator
AM477_RS23520	COG3012	SEC-C Motif Domain Protein
AM477_RS23520	COG3318	Belongs to the UPF0149 family
AM477_RS23525	COG0814	amino acid
AM477_RS23535	COG1528	Iron-storage protein
AM477_RS23550	COG0477	Major facilitator Superfamily
AM477_RS23560	COG2211	Major facilitator Superfamily
AM477_RS23570	COG1528	Iron-storage protein
AM477_RS23580	COG1879	ABC-type sugar transport system periplasmic component
AM477_RS23590	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS23615	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AM477_RS23625	COG3102	Protein conserved in bacteria
AM477_RS23645	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AM477_RS23650	COG1801	Protein of unknown function DUF72
AM477_RS23655	COG1335	isochorismatase
AM477_RS23665	COG0494	nUDIX hydrolase
AM477_RS23690	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM477_RS23700	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AM477_RS23705	COG0739	heme binding
AM477_RS23710	COG1560	Kdo2-lipid A biosynthetic process
AM477_RS23720	COG1737	Transcriptional regulator
AM477_RS23735	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AM477_RS23740	COG0129	dihydroxy-acid dehydratase activity
AM477_RS23745	COG0800	Aldolase
AM477_RS23755	COG3141	response to X-ray
AM477_RS23760	COG2979	Protein of unknown function (DUF533)
AM477_RS23765	COG1770	oligopeptidase
AM477_RS23770	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM477_RS23780	COG2372	response to copper ion
AM477_RS23785	COG1276	copper resistance
AM477_RS23800	COG2990	Protein conserved in bacteria
AM477_RS23825	COG3008	intermembrane lipid transfer
AM477_RS23830	COG2995	paraquat-inducible protein a
AM477_RS23835	COG1956	GAF domain-containing protein
AM477_RS23855	COG2814	Major facilitator Superfamily
AM477_RS23860	COG1414	Transcriptional regulator
AM477_RS23900	COG0768	penicillin binding
AM477_RS23905	COG2226	methyltransferase
AM477_RS23925	COG3716	PTS system mannose fructose sorbose family IID component
AM477_RS23930	COG3715	PTS system
AM477_RS23935	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM477_RS23935	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS23940	COG1253	flavin adenine dinucleotide binding
AM477_RS23945	COG2200	EAL domain
AM477_RS23950	COG1760	l-serine dehydratase
AM477_RS23970	COG0251	oxidation-reduction process
AM477_RS23975	COG1199	ATP-dependent helicase activity
AM477_RS23985	COG3065	identical protein binding
AM477_RS23995	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AM477_RS24005	COG2894	cell division
AM477_RS24020	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM477_RS24050	COG2719	SpoVR family
AM477_RS24070	COG1619	proteins homologs of microcin C7 resistance protein MccF
AM477_RS24080	COG4774	siderophore transport
AM477_RS24090	COG2308	Evidence 4 Homologs of previously reported genes of
AM477_RS24130	COG0583	DNA-binding transcription factor activity
AM477_RS24135	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM477_RS24150	COG1882	Formate acetyltransferase
AM477_RS24180	COG0583	DNA-binding transcription factor activity
AM477_RS24210	COG0583	DNA-binding transcription factor activity
AM477_RS24225	COG3122	Protein conserved in bacteria
AM477_RS24255	COG2885	chlorophyll binding
AM477_RS24335	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AM477_RS24425	COG0012	GTP binding
AM477_RS24445	COG0659	secondary active sulfate transmembrane transporter activity
AM477_RS24480	COG2890	protein-(glutamine-N5) methyltransferase activity
AM477_RS24500	COG0387	Pfam Sodium calcium exchanger
AM477_RS24505	COG4572	Cation transport regulator
AM477_RS24510	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM477_RS24520	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AM477_RS24525	COG3707	response regulator
AM477_RS24530	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM477_RS24540	COG1116	anion transmembrane transporter activity
AM477_RS24545	COG2146	nitrite reductase [NAD(P)H] activity
AM477_RS24545	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM477_RS24550	COG0243	molybdopterin cofactor binding
AM477_RS24555	COG4932	domain protein
AM477_RS24560	COG2197	response regulator
AM477_RS24565	COG3850	Histidine kinase
AM477_RS24570	COG2223	nitrite transmembrane transporter activity
AM477_RS24575	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM477_RS24580	COG1140	nitrate reductase beta subunit
AM477_RS24585	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM477_RS24590	COG2181	nitrate reductase activity
AM477_RS24600	COG1522	sequence-specific DNA binding
AM477_RS24635	COG0788	formyltetrahydrofolate deformylase activity
AM477_RS24645	COG1752	Esterase of the alpha-beta hydrolase superfamily
AM477_RS24650	COG0745	RESPONSE REGULATOR receiver
AM477_RS24655	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM477_RS24660	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM477_RS24665	COG1435	thymidine kinase activity
AM477_RS24670	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS24670	COG1454	alcohol dehydrogenase
AM477_RS24680	COG2095	MarC family integral membrane protein
AM477_RS24685	COG4166	transmembrane transport
AM477_RS24690	COG0601	transmembrane transport
AM477_RS24695	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM477_RS24700	COG0444	Belongs to the ABC transporter superfamily
AM477_RS24710	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM477_RS24730	COG2353	YceI-like domain
AM477_RS24735	COG2350	Protein conserved in bacteria
AM477_RS24745	COG3001	Fructosamine kinase
AM477_RS24755	COG1105	Belongs to the carbohydrate kinase PfkB family
AM477_RS24760	COG3137	Salt-induced outer membrane protein
AM477_RS24800	COG0072	phenylalanine-tRNA ligase activity
AM477_RS24800	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM477_RS24820	COG0583	DNA-binding transcription factor activity
AM477_RS24840	COG0386	Belongs to the glutathione peroxidase family
AM477_RS24850	COG0791	NLP P60 protein
AM477_RS24860	COG4256	Hemin uptake protein
AM477_RS24865	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM477_RS24875	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM477_RS24875	COG0574	Belongs to the PEP-utilizing enzyme family
AM477_RS24885	COG0628	permease
AM477_RS24890	COG0277	FAD linked oxidase domain protein
AM477_RS24890	COG0247	lactate metabolic process
AM477_RS24895	COG2050	protein possibly involved in aromatic compounds catabolism
AM477_RS24900	COG2261	transglycosylase associated protein
AM477_RS24935	COG1120	ATPase activity
AM477_RS24940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS24950	COG0583	DNA-binding transcription factor activity
AM477_RS24975	COG1304	FMN binding
AM477_RS24980	COG1309	transcriptional regulator
AM477_RS24995	COG0316	Belongs to the HesB IscA family
AM477_RS25000	COG0719	Fe-S assembly protein
AM477_RS25005	COG0396	ATPase activity
AM477_RS25010	COG0719	Fe-S assembly protein
AM477_RS25025	COG1376	ErfK ybiS ycfS ynhG family protein
AM477_RS25050	COG1309	transcriptional regulator
AM477_RS25055	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AM477_RS25055	COG1082	Xylose isomerase domain protein TIM barrel
AM477_RS25060	COG2271	Major facilitator Superfamily
AM477_RS25065	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM477_RS25075	COG1120	ATPase activity
AM477_RS25080	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS25085	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM477_RS25090	COG1414	Transcriptional regulator
AM477_RS25125	COG2814	Major facilitator Superfamily
AM477_RS25145	COG0583	DNA-binding transcription factor activity
AM477_RS25150	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS25170	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM477_RS25175	COG1116	anion transmembrane transporter activity
AM477_RS25180	COG4774	siderophore transport
AM477_RS25185	COG1120	ATPase activity
AM477_RS25190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS25195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM477_RS25215	COG0765	amino acid transport
AM477_RS25220	COG1126	abc transporter atp-binding protein
AM477_RS25250	COG1473	amidohydrolase
AM477_RS25255	COG3383	formate dehydrogenase (NAD+) activity
AM477_RS25260	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM477_RS25275	COG1175	transmembrane transport
AM477_RS25305	COG4133	protoheme IX ABC transporter activity
AM477_RS25310	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM477_RS25315	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM477_RS25330	COG1138	Cytochrome C-type biogenesis protein
AM477_RS25335	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM477_RS25340	COG3088	subunit of a heme lyase
AM477_RS25340	COG4235	cytochrome complex assembly
AM477_RS25360	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AM477_RS25375	COG3850	Histidine kinase
AM477_RS25375	COG5002	protein histidine kinase activity
AM477_RS25380	COG0745	RESPONSE REGULATOR receiver
AM477_RS25405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM477_RS25440	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS25445	COG2610	gluconate transmembrane transporter activity
AM477_RS25450	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM477_RS25460	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM477_RS25470	COG0583	DNA-binding transcription factor activity
AM477_RS25485	COG0277	FAD linked oxidase domain protein
AM477_RS25490	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM477_RS25515	COG0402	S-adenosylhomocysteine deaminase activity
AM477_RS25575	COG4608	Belongs to the ABC transporter superfamily
AM477_RS25580	COG0444	Belongs to the ABC transporter superfamily
AM477_RS25605	COG0346	lactoylglutathione lyase activity
AM477_RS25610	COG1349	DNA-binding transcription factor activity
AM477_RS25640	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AM477_RS25695	COG0307	riboflavin synthase, alpha
AM477_RS25700	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM477_RS25705	COG2814	Major facilitator Superfamily
AM477_RS25710	COG0583	DNA-binding transcription factor activity
AM477_RS25720	COG2814	Major facilitator Superfamily
AM477_RS25735	COG0791	NLP P60 protein
AM477_RS25740	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AM477_RS25750	COG0346	lactoylglutathione lyase activity
AM477_RS25755	COG1902	pentaerythritol trinitrate reductase activity
AM477_RS25760	COG1309	transcriptional regulator
AM477_RS25765	COG3313	Fe-S protein
AM477_RS25770	COG4989	oxidoreductase activity
AM477_RS25775	COG2032	superoxide dismutase activity
AM477_RS25780	COG1289	transmembrane transporter activity
AM477_RS25785	COG1566	PFAM secretion protein HlyD family protein
AM477_RS25800	COG3706	GGDEF domain
AM477_RS25815	COG3895	Periplasmic Protein
AM477_RS25830	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AM477_RS25835	COG0625	glutathione transferase activity
AM477_RS25850	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM477_RS25860	COG4659	FMN binding
AM477_RS25895	COG2723	6-phospho-beta-galactosidase activity
AM477_RS25905	COG0673	inositol 2-dehydrogenase activity
AM477_RS25915	COG2814	Major facilitator Superfamily
AM477_RS25935	COG3038	cytochrome b561
AM477_RS25955	COG0583	DNA-binding transcription factor activity
AM477_RS25960	COG3485	protocatechuate 3,4-dioxygenase
AM477_RS25965	COG3485	protocatechuate 3,4-dioxygenase
AM477_RS25970	COG5383	Protein conserved in bacteria
AM477_RS25975	COG2272	Belongs to the type-B carboxylesterase lipase family
AM477_RS25990	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM477_RS25995	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM477_RS26000	COG1275	C4-dicarboxylate transporter malic acid transport protein
AM477_RS26005	COG0500	methyltransferase
AM477_RS26020	COG3708	Transcriptional regulator
AM477_RS26020	COG2207	Transcriptional regulator
AM477_RS26025	COG3135	benzoate transporter
AM477_RS26030	COG1396	sequence-specific DNA binding
AM477_RS26040	COG0826	peptidase U32
AM477_RS26060	COG1294	oxidase, subunit
AM477_RS26065	COG1271	oxidase subunit
AM477_RS26070	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM477_RS26075	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM477_RS26080	COG3842	ATPase activity
AM477_RS26085	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM477_RS26090	COG1177	transmembrane transport
AM477_RS26095	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS26125	COG1012	belongs to the aldehyde dehydrogenase family
AM477_RS26130	COG0747	negative chemotaxis
AM477_RS26140	COG3238	Protein conserved in bacteria
AM477_RS26145	COG1247	-acetyltransferase
AM477_RS26155	COG2130	NADP-dependent
AM477_RS26170	COG3691	Protein conserved in bacteria
AM477_RS26175	COG1228	amidohydrolase
AM477_RS26180	COG4772	TonB-dependent receptor
AM477_RS26205	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AM477_RS26210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS26215	COG1473	amidohydrolase
AM477_RS26220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS26225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM477_RS26235	COG0765	amino acid transport
AM477_RS26240	COG1126	abc transporter atp-binding protein
AM477_RS26250	COG0625	glutathione transferase activity
AM477_RS26265	COG2211	Major facilitator Superfamily
AM477_RS26280	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM477_RS26285	COG3842	ATPase activity
AM477_RS26290	COG1840	ABC-type Fe3 transport system, periplasmic component
AM477_RS26295	COG1178	ABC-type Fe3 transport system permease component
AM477_RS26300	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AM477_RS26305	COG2181	nitrate reductase activity
AM477_RS26310	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM477_RS26315	COG1140	nitrate reductase beta subunit
AM477_RS26320	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM477_RS26340	COG1414	Transcriptional regulator
AM477_RS26345	COG4948	Mandelate Racemase Muconate Lactonizing
AM477_RS26350	COG4829	muconolactone delta-isomerase
AM477_RS26355	COG3485	protocatechuate 3,4-dioxygenase
AM477_RS26365	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AM477_RS26385	COG3383	formate dehydrogenase (NAD+) activity
AM477_RS26385	COG0243	molybdopterin cofactor binding
AM477_RS26390	COG0243	molybdopterin cofactor binding
AM477_RS26390	COG3383	formate dehydrogenase (NAD+) activity
AM477_RS26395	COG0437	4 iron, 4 sulfur cluster binding
AM477_RS26400	COG2864	formate dehydrogenase
AM477_RS26415	COG2326	polyphosphate kinase activity
AM477_RS26425	COG2814	Major facilitator Superfamily
AM477_RS26435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM477_RS26445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM477_RS26455	COG0747	negative chemotaxis
AM477_RS26460	COG1064	alcohol dehydrogenase
AM477_RS26475	COG0488	(ABC) transporter
AM477_RS26510	COG1028	Short-chain dehydrogenase reductase Sdr
AM477_RS26515	COG3729	General stress protein
AM477_RS26535	COG3685	Protein conserved in bacteria
AM477_RS26545	COG0366	Alpha amylase catalytic
AM477_RS26565	COG3111	PFAM Bacterial OB fold (BOF) protein
AM477_RS26570	COG1764	response to oxidative stress
AM477_RS26595	COG3781	membrane
AM477_RS26600	COG0243	molybdopterin cofactor binding
AM477_RS26605	COG0583	DNA-binding transcription factor activity
AM477_RS26610	COG2814	Major facilitator Superfamily
AM477_RS26620	COG1285	pathogenesis
AM477_RS26625	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM477_RS26635	COG0583	DNA-binding transcription factor activity
AM477_RS26655	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AM477_RS26655	COG0519	Catalyzes the synthesis of GMP from XMP
AM477_RS26695	COG0596	Alpha beta hydrolase
AM477_RS26705	COG2205	protein histidine kinase activity
AM477_RS26720	COG0076	glutamate decarboxylase activity
AM477_RS26725	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM477_RS26730	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM477_RS26735	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM477_RS26740	COG1116	anion transmembrane transporter activity
AM477_RS26745	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AM477_RS26755	COG0673	inositol 2-dehydrogenase activity
AM477_RS26770	COG3706	GGDEF domain
AM477_RS26775	COG0402	S-adenosylhomocysteine deaminase activity
AM477_RS26780	COG1953	Uracil, thiamine, allantoin
AM477_RS26820	COG0406	alpha-ribazole phosphatase activity
AM477_RS26840	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AM477_RS26855	COG2207	Transcriptional regulator
AM477_RS26870	COG0583	DNA-binding transcription factor activity
AM477_RS26885	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM477_RS26905	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM477_RS26950	COG0765	amino acid transport
AM477_RS26960	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AM477_RS26970	COG2070	2-Nitropropane dioxygenase
AM477_RS26975	COG0583	DNA-binding transcription factor activity
AM477_RS26985	COG1902	pentaerythritol trinitrate reductase activity
AM477_RS26990	COG4529	Protein conserved in bacteria
AM477_RS26995	COG0477	Major facilitator Superfamily
AM477_RS27025	COG2223	nitrite transmembrane transporter activity
AM477_RS27035	COG1609	Transcriptional regulator
AM477_RS27040	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM477_RS27050	COG3037	sugar-specific permease SgaT UlaA
AM477_RS27055	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM477_RS27070	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS27075	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS27075	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM477_RS27075	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM477_RS27090	COG0583	DNA-binding transcription factor activity
AM477_RS27095	COG0583	DNA-binding transcription factor activity
AM477_RS27100	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM477_RS27110	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AM477_RS27125	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM477_RS27135	COG1609	Transcriptional regulator
AM477_RS27165	COG1652	LysM domain
AM477_RS27195	COG0456	acetyltransferase
AM477_RS27195	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AM477_RS27205	COG0667	Aldo Keto reductase
AM477_RS27210	COG0667	Aldo Keto reductase
AM477_RS27215	COG3386	PFAM SMP-30 Gluconolaconase
AM477_RS27220	COG0667	Aldo Keto reductase
AM477_RS27245	COG4977	sequence-specific DNA binding
AM477_RS27265	COG4977	sequence-specific DNA binding
AM477_RS27270	COG1349	DNA-binding transcription factor activity
AM477_RS27285	COG1349	DNA-binding transcription factor activity
AM477_RS27290	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM477_RS27295	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM477_RS27300	COG0738	Major facilitator superfamily
AM477_RS27325	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM477_RS27355	COG0431	NADPH-dependent FMN reductase
AM477_RS27370	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AM477_RS27390	COG2205	protein histidine kinase activity
AM477_RS27395	COG0745	RESPONSE REGULATOR receiver
AM477_RS27400	COG1276	copper resistance
AM477_RS27405	COG2372	response to copper ion
AM477_RS27410	COG3667	copper resistance
AM477_RS27415	COG2132	Multicopper oxidase
AM477_RS27425	COG0739	heme binding
AM477_RS27455	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM477_RS27510	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM477_RS27520	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM477_RS27535	COG1716	ATPase activity
AM477_RS27535	COG5001	Diguanylate cyclase
AM477_RS27540	COG5002	protein histidine kinase activity
AM477_RS27540	COG3447	MASE1 domain protein
AM477_RS27540	COG5001	Diguanylate cyclase
AM477_RS27625	COG3344	reverse transcriptase
AM477_RS27700	COG1475	DNA binding
AM477_RS27785	COG5499	transcription regulator containing HTH domain
AM477_RS28065	COG3409	Peptidoglycan-binding domain 1 protein
AM477_RS28065	COG3429	Glucose-6-phosphate dehydrogenase subunit
AM477_RS28165	COG1695	Transcriptional regulator
AM477_RS28200	COG3173	Aminoglycoside phosphotransferase
AM477_RS28290	COG0071	Belongs to the small heat shock protein (HSP20) family
AM477_RS28295	COG0542	response to heat
AM477_RS28315	COG0501	Belongs to the peptidase M48B family
AM477_RS28330	COG2801	Transposase and inactivated derivatives
AM477_RS28440	COG3300	MHYT domain
AM477_RS28440	COG5001	Diguanylate cyclase
AM477_RS28480	COG4644	lycopene metabolic process
AM477_RS28505	COG5433	transposase activity
AM477_RS28540	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM477_RS28570	COG2746	aminoglycoside 3-N-acetyltransferase activity
AM477_RS28600	COG4221	oxidoreductase activity
AM477_RS28630	COG3328	transposase activity
AM477_RS28725	COG3344	reverse transcriptase
AM477_RS28830	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM477_RS28835	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM477_RS28865	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
AM477_RS28970	COG0484	heat shock protein binding
AM477_RS29010	COG1192	Involved in chromosome partitioning
AM477_RS29050	COG1349	DNA-binding transcription factor activity
AM477_RS29060	COG2084	Dehydrogenase