locus-tag	class	description
AM360_RS00015	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM360_RS00020	COG2258	MOSC domain
AM360_RS00025	COG2205	protein histidine kinase activity
AM360_RS00030	COG0745	RESPONSE REGULATOR receiver
AM360_RS00035	COG3678	ATP-independent chaperone mediated protein folding
AM360_RS00055	COG1575	Belongs to the MenA family. Type 1 subfamily
AM360_RS00070	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM360_RS00075	COG1609	Transcriptional regulator
AM360_RS00080	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AM360_RS00095	COG0626	cystathionine gamma-synthase activity
AM360_RS00100	COG0460	homoserine dehydrogenase
AM360_RS00100	COG0527	aspartate kinase activity
AM360_RS00110	COG0737	Belongs to the 5'-nucleotidase family
AM360_RS00120	COG0583	DNA-binding transcription factor activity
AM360_RS00130	COG0697	spore germination
AM360_RS00135	COG0371	Dehydrogenase
AM360_RS00145	COG2207	Transcriptional regulator
AM360_RS00150	COG3443	Belongs to the bacterial solute-binding protein 9 family
AM360_RS00165	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AM360_RS00190	COG0583	DNA-binding transcription factor activity
AM360_RS00265	COG3085	chromosome segregation
AM360_RS00285	COG3978	acetolactate synthase activity
AM360_RS00300	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM360_RS00305	COG0583	DNA-binding transcription factor activity
AM360_RS00315	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM360_RS00320	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM360_RS00330	COG1811	Na channel or pump
AM360_RS00365	COG3118	belongs to the thioredoxin family
AM360_RS00375	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AM360_RS00380	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AM360_RS00390	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AM360_RS00395	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AM360_RS00400	COG1088	dTDP-glucose 4,6-dehydratase activity
AM360_RS00405	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AM360_RS00410	COG0456	acetyltransferase
AM360_RS00415	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AM360_RS00420	COG2244	polysaccharide biosynthetic process
AM360_RS00465	COG3071	HemY protein
AM360_RS00470	COG2959	enzyme of heme biosynthesis
AM360_RS00485	COG3072	Adenylate cyclase
AM360_RS00515	COG1011	Hydrolase
AM360_RS00520	COG0210	DNA helicase
AM360_RS00555	COG1280	lysine exporter protein (LysE YggA)
AM360_RS00565	COG1280	lysine exporter protein (LysE YggA)
AM360_RS00570	COG2267	carboxylic ester hydrolase activity
AM360_RS00575	COG0561	phosphatase activity
AM360_RS00580	COG0697	spore germination
AM360_RS00585	COG0583	DNA-binding transcription factor activity
AM360_RS00615	COG3165	ubiquinone biosynthetic process from chorismate
AM360_RS00635	COG0805	protein transport
AM360_RS00680	COG1739	Uncharacterized protein family UPF0029
AM360_RS00690	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AM360_RS00725	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AM360_RS00775	COG0250	Participates in transcription elongation, termination and antitermination
AM360_RS00815	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM360_RS00820	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM360_RS00830	COG3706	GGDEF domain
AM360_RS00850	COG2104	thiamine diphosphate biosynthetic process
AM360_RS00855	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM360_RS00870	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AM360_RS00905	COG3678	ATP-independent chaperone mediated protein folding
AM360_RS00910	COG4191	Histidine kinase
AM360_RS00920	COG0151	Belongs to the GarS family
AM360_RS00960	COG0456	acetyltransferase
AM360_RS00970	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM360_RS01000	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM360_RS01055	COG0527	aspartate kinase activity
AM360_RS01070	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AM360_RS01080	COG0251	oxidation-reduction process
AM360_RS01155	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AM360_RS01165	COG0534	Mate efflux family protein
AM360_RS01170	COG3237	CsbD-like
AM360_RS01175	COG0735	belongs to the Fur family
AM360_RS01185	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM360_RS01200	COG0305	Participates in initiation and elongation during chromosome replication
AM360_RS01205	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM360_RS01220	COG0432	Pfam Uncharacterised protein family UPF0047
AM360_RS01225	COG2315	Protein conserved in bacteria
AM360_RS01240	COG0741	lytic transglycosylase activity
AM360_RS01245	COG4771	TonB-dependent receptor
AM360_RS01265	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM360_RS01280	COG0483	inositol monophosphate 1-phosphatase activity
AM360_RS01285	COG1609	Transcriptional regulator
AM360_RS01290	COG1234	tRNA 3'-trailer cleavage
AM360_RS01325	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM360_RS01335	COG0789	Transcriptional regulator
AM360_RS01340	COG0625	glutathione transferase activity
AM360_RS01350	COG2252	PERMEase
AM360_RS01355	COG0025	NhaP-type Na H and K H
AM360_RS01360	COG0583	DNA-binding transcription factor activity
AM360_RS01365	COG1380	Effector of murein hydrolase LrgA
AM360_RS01370	COG1346	cytolysis
AM360_RS01375	COG3539	Fimbrial protein
AM360_RS01405	COG3162	membrane
AM360_RS01415	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM360_RS01425	COG1301	dicarboxylic acid transport
AM360_RS01430	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM360_RS01465	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS01470	COG1129	ABC transporter
AM360_RS01475	COG4191	Histidine kinase
AM360_RS01475	COG0784	Response regulator, receiver
AM360_RS01485	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AM360_RS01495	COG3454	Phosphonate metabolism
AM360_RS01500	COG4778	phosphonate C-P lyase system protein PhnL
AM360_RS01505	COG4107	phosphonate C-P lyase system protein PhnK
AM360_RS01510	COG3627	carbon phosphorus lyase activity
AM360_RS01515	COG3626	phosphonate metabolism
AM360_RS01520	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AM360_RS01525	COG3624	Phosphonate C-P lyase system protein PhnG
AM360_RS01530	COG2188	Transcriptional regulator
AM360_RS01535	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AM360_RS01540	COG2824	Alkylphosphonate utilization operon protein PhnA
AM360_RS01555	COG2169	Transcriptional regulator
AM360_RS01565	COG1486	melibiose metabolic process
AM360_RS01600	COG0861	Integral membrane protein TerC family
AM360_RS01620	COG1215	transferase activity, transferring glycosyl groups
AM360_RS01625	COG0726	polysaccharide deacetylase
AM360_RS01625	COG1649	PFAM Uncharacterised BCR, COG1649
AM360_RS01630	COG0457	Tetratricopeptide repeat
AM360_RS01660	COG1309	transcriptional regulator
AM360_RS01675	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM360_RS01680	COG1027	Aspartate ammonia-lyase
AM360_RS01690	COG3030	protein affecting phage T7 exclusion by the F plasmid
AM360_RS01695	COG0531	amino acid
AM360_RS01775	COG1509	lysine 2,3-aminomutase activity
AM360_RS01790	COG5510	response to toxic substance
AM360_RS01795	COG2076	Multidrug Resistance protein
AM360_RS01815	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM360_RS01820	COG1053	succinate dehydrogenase
AM360_RS01835	COG1511	domain protein
AM360_RS01835	COG3264	Mechanosensitive ion channel
AM360_RS01860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS01885	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM360_RS01890	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AM360_RS01890	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AM360_RS01895	COG0802	atpase or kinase
AM360_RS01900	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM360_RS01920	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AM360_RS01925	COG0330	HflC and HflK could
AM360_RS01930	COG0330	HflC and HflK could
AM360_RS01940	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AM360_RS01955	COG0557	exoribonuclease II activity
AM360_RS01960	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM360_RS01965	COG1960	acyl-CoA dehydrogenase activity
AM360_RS01975	COG3650	response to hydrogen peroxide
AM360_RS01980	COG1073	alpha beta
AM360_RS02040	COG2965	DNA replication, synthesis of RNA primer
AM360_RS02045	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AM360_RS02055	COG3061	Opacity-associated protein A
AM360_RS02060	COG0545	Peptidyl-prolyl cis-trans isomerase
AM360_RS02065	COG1113	amino acid transport
AM360_RS02075	COG0697	spore germination
AM360_RS02085	COG0702	epimerase
AM360_RS02090	COG1733	regulation of RNA biosynthetic process
AM360_RS02105	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM360_RS02120	COG1253	flavin adenine dinucleotide binding
AM360_RS02130	COG0729	surface antigen
AM360_RS02135	COG2911	Protein conserved in bacteria
AM360_RS02140	COG2105	PFAM AIG2 family protein
AM360_RS02160	COG1879	ABC-type sugar transport system periplasmic component
AM360_RS02165	COG1129	ABC transporter
AM360_RS02170	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS02175	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS02185	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AM360_RS02205	COG0312	modulator of DNA gyrase
AM360_RS02240	COG3964	amidohydrolase
AM360_RS02255	COG2706	6-phosphogluconolactonase activity
AM360_RS02260	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS02260	COG3711	transcriptional antiterminator
AM360_RS02265	COG3077	Addiction module antitoxin, RelB DinJ family
AM360_RS02270	COG2026	Addiction module toxin, RelE StbE family
AM360_RS02275	COG0602	queuosine metabolic process
AM360_RS02295	COG1486	melibiose metabolic process
AM360_RS02300	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS02305	COG0366	Alpha amylase catalytic
AM360_RS02310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS02310	COG1263	PTS System
AM360_RS02350	COG2731	YhcH YjgK YiaL family protein
AM360_RS02355	COG2222	sugar isomerase
AM360_RS02360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS02365	COG1228	amidohydrolase
AM360_RS02370	COG1288	antiporter activity
AM360_RS02375	COG2188	Transcriptional regulator
AM360_RS02400	COG0525	valine-tRNA ligase activity
AM360_RS02405	COG2927	DNA polymerase III (CHI subunit)
AM360_RS02420	COG0795	lipopolysaccharide-transporting ATPase activity
AM360_RS02425	COG0795	lipopolysaccharide-transporting ATPase activity
AM360_RS02430	COG0433	COG0433 Predicted ATPase
AM360_RS02445	COG3718	enzyme involved in inositol metabolism
AM360_RS02480	COG1737	Transcriptional regulator
AM360_RS02480	COG0837	glucose binding
AM360_RS02485	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS02490	COG3962	Belongs to the TPP enzyme family
AM360_RS02500	COG1082	Xylose isomerase domain protein TIM barrel
AM360_RS02510	COG1653	transport
AM360_RS02515	COG3842	ATPase activity
AM360_RS02520	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM360_RS02525	COG0395	ABC-type sugar transport system, permease component
AM360_RS02530	COG1175	transmembrane transport
AM360_RS02535	COG1064	alcohol dehydrogenase
AM360_RS02540	COG0659	secondary active sulfate transmembrane transporter activity
AM360_RS02545	COG0288	reversible hydration of carbon dioxide
AM360_RS02560	COG0582	viral genome integration into host DNA
AM360_RS02625	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM360_RS02625	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AM360_RS02670	COG3507	Belongs to the glycosyl hydrolase 43 family
AM360_RS02675	COG2211	Major facilitator Superfamily
AM360_RS02685	COG4580	involved in the transport of maltose and maltodextrins
AM360_RS02690	COG3272	Protein of unknown function (DUF1722)
AM360_RS02710	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM360_RS02725	COG0300	oxidoreductase activity
AM360_RS02735	COG0789	Transcriptional regulator
AM360_RS02740	COG3040	lipid binding
AM360_RS02750	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM360_RS02755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS02760	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS02765	COG1538	Outer membrane efflux protein
AM360_RS02775	COG0745	RESPONSE REGULATOR receiver
AM360_RS02780	COG5002	protein histidine kinase activity
AM360_RS02795	COG2850	peptidyl-arginine hydroxylation
AM360_RS02825	COG0842	Transport permease protein
AM360_RS02830	COG1129	ABC transporter
AM360_RS02830	COG0842	Transport permease protein
AM360_RS02835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS02845	COG1879	ABC-type sugar transport system periplasmic component
AM360_RS02850	COG1129	ABC transporter
AM360_RS02855	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS02865	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM360_RS02870	COG0583	DNA-binding transcription factor activity
AM360_RS02880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM360_RS02885	COG5457	Domain of unknown function (DUF1127)
AM360_RS02895	COG1566	PFAM secretion protein HlyD family protein
AM360_RS02910	COG1924	4 iron, 4 sulfur cluster binding
AM360_RS02915	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AM360_RS02930	COG2733	membrane
AM360_RS02940	COG2207	Transcriptional regulator
AM360_RS02940	COG1917	Cupin 2, conserved barrel domain protein
AM360_RS02950	COG5464	transposase or invertase
AM360_RS02955	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS02965	COG0523	cobalamin synthesis protein
AM360_RS02970	COG2879	small protein
AM360_RS02975	COG1966	Carbon starvation protein
AM360_RS02990	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM360_RS02995	COG2368	4-hydroxyphenylacetate
AM360_RS03015	COG3971	2-oxopent-4-enoate hydratase activity
AM360_RS03025	COG3384	dioxygenase
AM360_RS03030	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS03040	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM360_RS03050	COG1846	Transcriptional regulator
AM360_RS03080	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AM360_RS03095	COG3734	2-keto-3-deoxy-galactonokinase
AM360_RS03100	COG0800	Aldolase
AM360_RS03105	COG1737	Transcriptional regulator
AM360_RS03115	COG0456	acetyltransferase
AM360_RS03115	COG1214	PFAM Peptidase M22, glycoprotease
AM360_RS03120	COG2271	Major facilitator Superfamily
AM360_RS03125	COG1802	Transcriptional regulator
AM360_RS03130	COG1063	alcohol dehydrogenase
AM360_RS03140	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AM360_RS03140	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM360_RS03155	COG3715	PTS system
AM360_RS03160	COG3716	PTS system mannose fructose sorbose family IID component
AM360_RS03165	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM360_RS03175	COG5464	transposase or invertase
AM360_RS03190	COG1484	DNA-dependent DNA replication
AM360_RS03205	COG2966	Psort location CytoplasmicMembrane, score
AM360_RS03225	COG2197	response regulator
AM360_RS03230	COG2197	response regulator
AM360_RS03235	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM360_RS03240	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS03240	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS03245	COG4114	ferric iron reductase
AM360_RS03250	COG3706	GGDEF domain
AM360_RS03280	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AM360_RS03285	COG0456	acetyltransferase
AM360_RS03290	COG1011	Hydrolase
AM360_RS03300	COG2823	Periplasmic or secreted lipoprotein
AM360_RS03310	COG4667	esterase of the alpha-beta hydrolase superfamily
AM360_RS03315	COG0084	hydrolase, TatD family'
AM360_RS03320	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM360_RS03350	COG3726	membrane protein affecting hemolysin expression
AM360_RS03360	COG0560	Phosphoserine phosphatase
AM360_RS03365	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AM360_RS03375	COG0488	(ABC) transporter
AM360_RS03385	COG0741	lytic transglycosylase activity
AM360_RS03405	COG3708	Transcriptional regulator
AM360_RS03405	COG2207	Transcriptional regulator
AM360_RS03410	COG3045	CreA protein
AM360_RS03415	COG0745	RESPONSE REGULATOR receiver
AM360_RS03420	COG2205	protein histidine kinase activity
AM360_RS03425	COG4452	Inner membrane protein CreD
AM360_RS03430	COG0745	RESPONSE REGULATOR receiver
AM360_RS03445	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AM360_RS03455	COG0460	homoserine dehydrogenase
AM360_RS03455	COG0527	aspartate kinase activity
AM360_RS03465	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AM360_RS03480	COG1115	amino acid carrier protein
AM360_RS03485	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM360_RS03490	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM360_RS03495	COG0477	Major facilitator Superfamily
AM360_RS03500	COG1584	GPR1 FUN34 yaaH family protein
AM360_RS03505	COG4735	regulation of single-species biofilm formation
AM360_RS03530	COG0583	DNA-binding transcription factor activity
AM360_RS03550	COG0196	riboflavin kinase activity
AM360_RS03565	COG1047	Peptidyl-prolyl cis-trans
AM360_RS03590	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AM360_RS03660	COG0505	Belongs to the CarA family
AM360_RS03715	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AM360_RS03725	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM360_RS03730	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AM360_RS03745	COG3493	citrate carrier protein
AM360_RS03760	COG0564	pseudouridine synthase activity
AM360_RS03770	COG0417	DNA replication proofreading
AM360_RS03775	COG0235	Class ii aldolase
AM360_RS03795	COG0586	Pfam SNARE associated Golgi protein
AM360_RS03805	COG1178	ABC-type Fe3 transport system permease component
AM360_RS03825	COG2814	Major facilitator Superfamily
AM360_RS03830	COG2271	Major facilitator Superfamily
AM360_RS03835	COG0583	DNA-binding transcription factor activity
AM360_RS03845	COG0738	Major facilitator superfamily
AM360_RS03895	COG0028	Belongs to the TPP enzyme family
AM360_RS03905	COG1609	Transcriptional regulator
AM360_RS03930	COG0768	penicillin binding
AM360_RS03935	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM360_RS03940	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AM360_RS03955	COG0772	Belongs to the SEDS family
AM360_RS03980	COG0849	cell division
AM360_RS03985	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AM360_RS04005	COG0494	nUDIX hydrolase
AM360_RS04030	COG1459	type II secretion system
AM360_RS04035	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM360_RS04040	COG4969	Belongs to the N-Me-Phe pilin family
AM360_RS04050	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM360_RS04055	COG3725	Membrane protein required for beta-lactamase induction
AM360_RS04060	COG3940	Belongs to the glycosyl hydrolase 43 family
AM360_RS04065	COG2211	Major facilitator Superfamily
AM360_RS04070	COG1113	amino acid transport
AM360_RS04075	COG2186	Transcriptional regulator
AM360_RS04080	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AM360_RS04085	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM360_RS04090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM360_RS04105	COG3064	Membrane
AM360_RS04160	COG2132	Multicopper oxidase
AM360_RS04165	COG4993	Dehydrogenase
AM360_RS04175	COG0288	reversible hydration of carbon dioxide
AM360_RS04180	COG1131	(ABC) transporter
AM360_RS04185	COG0842	Transport permease protein
AM360_RS04190	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS04195	COG0726	polysaccharide deacetylase
AM360_RS04215	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AM360_RS04220	COG0617	tRNA 3'-terminal CCA addition
AM360_RS04240	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AM360_RS04245	COG1643	Atp-dependent helicase
AM360_RS04335	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM360_RS04340	COG4774	siderophore transport
AM360_RS04345	COG1120	ATPase activity
AM360_RS04350	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM360_RS04355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS04375	COG2860	membrane
AM360_RS04395	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM360_RS04400	COG3835	regulator
AM360_RS04415	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AM360_RS04420	COG0024	Methionine aminopeptidase
AM360_RS04445	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AM360_RS04460	COG0575	Belongs to the CDS family
AM360_RS04465	COG0750	zinc metalloprotease
AM360_RS04475	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AM360_RS04515	COG1982	Orn Lys Arg decarboxylase major
AM360_RS04520	COG0346	lactoylglutathione lyase activity
AM360_RS04530	COG4568	rho-dependent transcription termination
AM360_RS04545	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM360_RS04550	COG3015	lipoprotein NlpE involved in copper resistance
AM360_RS04555	COG0791	NLP P60 protein
AM360_RS04565	COG1720	tRNA m6t6A37 methyltransferase activity
AM360_RS04575	COG1464	Belongs to the NlpA lipoprotein family
AM360_RS04580	COG2011	ABC-type metal ion transport system permease component
AM360_RS04590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM360_RS04625	COG0656	L-ascorbic acid biosynthetic process
AM360_RS04630	COG0583	DNA-binding transcription factor activity
AM360_RS04635	COG2814	Major facilitator Superfamily
AM360_RS04645	COG2226	methyltransferase
AM360_RS04650	COG1388	LysM domain
AM360_RS04650	COG0741	lytic transglycosylase activity
AM360_RS04660	COG2226	methyltransferase
AM360_RS04670	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM360_RS04680	COG0583	DNA-binding transcription factor activity
AM360_RS04690	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM360_RS04695	COG1960	acyl-CoA dehydrogenase activity
AM360_RS04705	COG0121	glutamine amidotransferase
AM360_RS04710	COG3034	peptidoglycan biosynthetic process
AM360_RS04730	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM360_RS04735	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM360_RS04750	COG2991	Protein conserved in bacteria
AM360_RS04765	COG0454	-acetyltransferase
AM360_RS04770	COG2195	Cleaves the N-terminal amino acid of tripeptides
AM360_RS04790	COG1802	Transcriptional regulator
AM360_RS04795	COG1113	amino acid transport
AM360_RS04800	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM360_RS04805	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS04810	COG0579	oxidoreductase
AM360_RS04830	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AM360_RS04835	COG0625	glutathione transferase activity
AM360_RS04840	COG3775	system Galactitol-specific IIC component
AM360_RS04845	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM360_RS04850	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS04855	COG1070	Carbohydrate kinase
AM360_RS04880	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM360_RS04885	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM360_RS04890	COG0022	dehydrogenase e1 component
AM360_RS04895	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AM360_RS04955	COG1192	Involved in chromosome partitioning
AM360_RS04960	COG0582	viral genome integration into host DNA
AM360_RS04985	COG0791	NLP P60 protein
AM360_RS05010	COG3639	organic phosphonate transmembrane transporter activity
AM360_RS05020	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AM360_RS05045	COG3188	usher protein
AM360_RS05060	COG0765	amino acid transport
AM360_RS05065	COG0765	amino acid transport
AM360_RS05070	COG1126	abc transporter atp-binding protein
AM360_RS05075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS05110	COG4302	ethanolamine ammonia-lyase activity
AM360_RS05115	COG4303	Ethanolamine ammonia lyase large subunit
AM360_RS05125	COG0833	amino acid
AM360_RS05130	COG2040	homocysteine
AM360_RS05135	COG4521	taurine ABC transporter
AM360_RS05140	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AM360_RS05145	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM360_RS05150	COG2175	clavaminate synthase activity
AM360_RS05160	COG0113	porphobilinogen synthase activity
AM360_RS05165	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM360_RS05170	COG1335	isochorismatase
AM360_RS05175	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AM360_RS05215	COG1785	Belongs to the alkaline phosphatase family
AM360_RS05225	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AM360_RS05235	COG3416	Protein conserved in bacteria
AM360_RS05240	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AM360_RS05250	COG4126	flavin adenine dinucleotide binding
AM360_RS05265	COG1940	carbohydrate kinase activity
AM360_RS05270	COG0419	ATPase involved in DNA repair
AM360_RS05275	COG0420	3'-5' exonuclease activity
AM360_RS05300	COG0366	Alpha amylase catalytic
AM360_RS05305	COG0583	DNA-binding transcription factor activity
AM360_RS05310	COG1335	isochorismatase
AM360_RS05320	COG1228	amidohydrolase
AM360_RS05330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS05345	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS05350	COG0450	alkyl hydroperoxide reductase
AM360_RS05370	COG1862	Preprotein translocase
AM360_RS05375	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM360_RS05380	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM360_RS05400	COG4238	major outer membrane lipoprotein
AM360_RS05410	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM360_RS05410	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM360_RS05430	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AM360_RS05435	COG0667	Aldo Keto reductase
AM360_RS05445	COG0142	geranyltranstransferase activity
AM360_RS05465	COG0693	protein deglycase activity
AM360_RS05470	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AM360_RS05480	COG2814	Major facilitator Superfamily
AM360_RS05485	COG0673	inositol 2-dehydrogenase activity
AM360_RS05500	COG1053	succinate dehydrogenase
AM360_RS05510	COG1053	succinate dehydrogenase
AM360_RS05515	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM360_RS05520	COG1414	Transcriptional regulator
AM360_RS05535	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM360_RS05540	COG1845	cytochrome c oxidase, subunit III
AM360_RS05545	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM360_RS05550	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM360_RS05555	COG2223	nitrite transmembrane transporter activity
AM360_RS05560	COG3056	Lipoprotein
AM360_RS05565	COG0271	Belongs to the BolA IbaG family
AM360_RS05595	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AM360_RS05600	COG0776	regulation of translation
AM360_RS05605	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM360_RS05610	COG1555	photosystem II stabilization
AM360_RS05615	COG0824	Thioesterase
AM360_RS05625	COG4533	DNA binding
AM360_RS05640	COG1522	sequence-specific DNA binding
AM360_RS05645	COG1132	(ABC) transporter
AM360_RS05650	COG1132	(ABC) transporter
AM360_RS05655	COG0347	Belongs to the P(II) protein family
AM360_RS05660	COG0004	ammonium transporteR
AM360_RS05665	COG1946	Acyl-CoA thioesterase
AM360_RS05670	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AM360_RS05675	COG3695	enzyme binding
AM360_RS05705	COG2364	Membrane
AM360_RS05720	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM360_RS05730	COG2182	Extracellular solute-binding protein
AM360_RS05735	COG1175	transmembrane transport
AM360_RS05740	COG3833	ABC-type maltose transport systems, permease component
AM360_RS05745	COG3867	Arabinogalactan endo-beta-1,4-galactanase
AM360_RS05750	COG1874	Beta-galactosidase
AM360_RS05795	COG0110	maltose O-acetyltransferase activity
AM360_RS05810	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM360_RS05815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS05820	COG1309	transcriptional regulator
AM360_RS05825	COG3264	Mechanosensitive ion channel
AM360_RS05825	COG1196	nuclear chromosome segregation
AM360_RS05830	COG5464	transposase or invertase
AM360_RS05840	COG3923	Primosomal replication protein n
AM360_RS05845	COG2832	Protein of unknown function (DUF454)
AM360_RS05885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS05890	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM360_RS05890	COG4651	solute:proton antiporter activity
AM360_RS05895	COG2223	nitrite transmembrane transporter activity
AM360_RS05905	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM360_RS05910	COG3735	TraB family
AM360_RS05925	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM360_RS05930	COG0330	HflC and HflK could
AM360_RS05935	COG4619	ABC transporter
AM360_RS05940	COG0390	transport system, permease component
AM360_RS05950	COG3118	belongs to the thioredoxin family
AM360_RS05955	COG0300	oxidoreductase activity
AM360_RS05960	COG2755	lipolytic protein G-D-S-L family
AM360_RS05965	COG4181	ATPase activity
AM360_RS05970	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AM360_RS05985	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AM360_RS05990	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AM360_RS06010	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM360_RS06020	COG2501	S4 domain
AM360_RS06040	COG0582	viral genome integration into host DNA
AM360_RS06120	COG0305	Participates in initiation and elongation during chromosome replication
AM360_RS06190	COG3772	lysozyme
AM360_RS06375	COG3344	reverse transcriptase
AM360_RS06390	COG0582	viral genome integration into host DNA
AM360_RS06430	COG3539	Fimbrial protein
AM360_RS06435	COG3121	Chaperone
AM360_RS06440	COG3188	usher protein
AM360_RS06455	COG1560	Kdo2-lipid A biosynthetic process
AM360_RS06465	COG3710	Transcriptional regulator
AM360_RS06470	COG0531	amino acid
AM360_RS06475	COG1982	Orn Lys Arg decarboxylase major
AM360_RS06480	COG3104	oligopeptide transport
AM360_RS06510	COG0673	inositol 2-dehydrogenase activity
AM360_RS06525	COG1129	ABC transporter
AM360_RS06530	COG4211	Belongs to the binding-protein-dependent transport system permease family
AM360_RS06575	COG1566	PFAM secretion protein HlyD family protein
AM360_RS06580	COG1120	ATPase activity
AM360_RS06585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS06610	COG1473	amidohydrolase
AM360_RS06615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS06620	COG0667	Aldo Keto reductase
AM360_RS06670	COG0531	amino acid
AM360_RS06680	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM360_RS06685	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS06700	COG1113	amino acid transport
AM360_RS06705	COG2211	Major facilitator Superfamily
AM360_RS06715	COG0673	inositol 2-dehydrogenase activity
AM360_RS06725	COG2771	luxR family
AM360_RS06740	COG3188	usher protein
AM360_RS06770	COG0668	transmembrane transport
AM360_RS06775	COG0477	Major facilitator Superfamily
AM360_RS06795	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM360_RS06795	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AM360_RS06800	COG2222	sugar isomerase
AM360_RS06805	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM360_RS06810	COG3716	PTS system mannose fructose sorbose family IID component
AM360_RS06820	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS06830	COG0778	Nitroreductase
AM360_RS06835	COG2315	Protein conserved in bacteria
AM360_RS06885	COG3698	Phosphodiester glycosidase
AM360_RS06895	COG0697	spore germination
AM360_RS06910	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AM360_RS06915	COG0765	amino acid transport
AM360_RS06920	COG4215	(ABC) transporter
AM360_RS06930	COG4221	oxidoreductase activity
AM360_RS06935	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM360_RS06945	COG4608	Belongs to the ABC transporter superfamily
AM360_RS06950	COG0444	Belongs to the ABC transporter superfamily
AM360_RS06955	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS06960	COG0601	transmembrane transport
AM360_RS06965	COG0747	negative chemotaxis
AM360_RS06995	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM360_RS07005	COG0668	transmembrane transport
AM360_RS07010	COG0583	DNA-binding transcription factor activity
AM360_RS07020	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS07030	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS07035	COG1129	ABC transporter
AM360_RS07045	COG1879	ABC-type sugar transport system periplasmic component
AM360_RS07050	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AM360_RS07055	COG2390	Transcriptional regulator
AM360_RS07065	COG3959	Transketolase, thiamine diphosphate binding domain
AM360_RS07070	COG3958	Transketolase
AM360_RS07075	COG2977	Belongs to the P-Pant transferase superfamily
AM360_RS07080	COG4771	TonB-dependent receptor
AM360_RS07090	COG2382	esterase
AM360_RS07095	COG3251	PFAM MbtH domain protein
AM360_RS07100	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AM360_RS07100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM360_RS07105	COG1120	ATPase activity
AM360_RS07110	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS07115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS07125	COG4592	Periplasmic binding protein
AM360_RS07130	COG1169	isochorismate synthase
AM360_RS07135	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM360_RS07140	COG1535	isochorismatase
AM360_RS07140	COG3433	isochorismatase activity
AM360_RS07145	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS07155	COG1966	Carbon starvation protein
AM360_RS07160	COG2879	small protein
AM360_RS07175	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS07180	COG0371	Dehydrogenase
AM360_RS07185	COG1129	ABC transporter
AM360_RS07190	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS07220	COG2271	Major facilitator Superfamily
AM360_RS07225	COG0483	inositol monophosphate 1-phosphatase activity
AM360_RS07235	COG0402	S-adenosylhomocysteine deaminase activity
AM360_RS07245	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM360_RS07260	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM360_RS07270	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS07275	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS07280	COG1129	ABC transporter
AM360_RS07305	COG0436	Aminotransferase
AM360_RS07310	COG1475	DNA binding
AM360_RS07315	COG3969	phosphoadenosine phosphosulfate
AM360_RS07320	COG0583	DNA-binding transcription factor activity
AM360_RS07325	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM360_RS07345	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM360_RS07350	COG3719	Belongs to the RNase T2 family
AM360_RS07355	COG3069	C4-dicarboxylate transmembrane transporter activity
AM360_RS07375	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM360_RS07390	COG0583	DNA-binding transcription factor activity
AM360_RS07405	COG1686	Belongs to the peptidase S11 family
AM360_RS07410	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM360_RS07415	COG0772	Belongs to the SEDS family
AM360_RS07420	COG0768	penicillin binding
AM360_RS07430	COG0799	negative regulation of ribosome biogenesis
AM360_RS07450	COG1466	dna polymerase III delta subunit
AM360_RS07465	COG2888	peptidyl-tyrosine sulfation
AM360_RS07480	COG1126	abc transporter atp-binding protein
AM360_RS07485	COG0765	amino acid transport
AM360_RS07490	COG0765	amino acid transport
AM360_RS07505	COG4535	Mg2 and Co2 transporter CorC
AM360_RS07515	COG1702	phosphate starvation-inducible protein PhoH
AM360_RS07525	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM360_RS07570	COG0367	asparagine synthase
AM360_RS07575	COG0647	UMP catabolic process
AM360_RS07580	COG1940	carbohydrate kinase activity
AM360_RS07580	COG1846	Transcriptional regulator
AM360_RS07585	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM360_RS07630	COG0735	belongs to the Fur family
AM360_RS07645	COG0596	Alpha beta hydrolase
AM360_RS07655	COG0033	Phosphoglucomutase
AM360_RS07665	COG0745	RESPONSE REGULATOR receiver
AM360_RS07670	COG2205	protein histidine kinase activity
AM360_RS07700	COG0415	Belongs to the DNA photolyase family
AM360_RS07715	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AM360_RS07720	COG1984	allophanate hydrolase subunit 2
AM360_RS07760	COG2009	succinate dehydrogenase
AM360_RS07765	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AM360_RS07770	COG1053	succinate dehydrogenase
AM360_RS07775	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM360_RS07780	COG0567	Dehydrogenase, E1 component
AM360_RS07785	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM360_RS07795	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM360_RS07805	COG1271	oxidase subunit
AM360_RS07810	COG1294	oxidase, subunit
AM360_RS07815	COG4890	Cyd operon protein YbgT
AM360_RS07820	COG3790	cyd operon protein YbgE
AM360_RS07825	COG0824	Thioesterase
AM360_RS07830	COG0811	peptide transport
AM360_RS07835	COG0848	biopolymer transport protein
AM360_RS07840	COG3064	Membrane
AM360_RS07850	COG2885	chlorophyll binding
AM360_RS07855	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AM360_RS07900	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AM360_RS07905	COG3201	nicotinamide mononucleotide transporter
AM360_RS07920	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM360_RS07930	COG2017	converts alpha-aldose to the beta-anomer
AM360_RS07940	COG1085	galactose-1-phosphate uridylyltransferase
AM360_RS07950	COG1119	ATPase activity
AM360_RS07960	COG2005	Transcriptional regulator
AM360_RS07960	COG3585	molybdate ion transport
AM360_RS07970	COG0725	ABC transporter, periplasmic molybdate-binding protein
AM360_RS07975	COG4149	molybdate abc transporter
AM360_RS07980	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AM360_RS07985	COG0561	phosphatase activity
AM360_RS08010	COG2200	EAL domain
AM360_RS08015	COG0789	Transcriptional regulator
AM360_RS08045	COG4677	pectinesterase activity
AM360_RS08085	COG1881	PFAM PEBP family protein
AM360_RS08090	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM360_RS08105	COG2226	methyltransferase
AM360_RS08140	COG0642	Histidine kinase
AM360_RS08145	COG0745	RESPONSE REGULATOR receiver
AM360_RS08170	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM360_RS08180	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AM360_RS08185	COG0314	molybdopterin synthase activity
AM360_RS08190	COG0670	Belongs to the BI1 family
AM360_RS08195	COG0392	lysyltransferase activity
AM360_RS08200	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM360_RS08205	COG3568	Endonuclease Exonuclease Phosphatase
AM360_RS08215	COG0842	Transport permease protein
AM360_RS08220	COG0842	Transport permease protein
AM360_RS08225	COG1131	(ABC) transporter
AM360_RS08230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS08235	COG1309	transcriptional regulator
AM360_RS08240	COG0583	DNA-binding transcription factor activity
AM360_RS08245	COG2271	Major facilitator Superfamily
AM360_RS08250	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS08255	COG3959	Transketolase, thiamine diphosphate binding domain
AM360_RS08260	COG3958	Transketolase
AM360_RS08265	COG0513	Belongs to the DEAD box helicase family
AM360_RS08270	COG1199	ATP-dependent helicase activity
AM360_RS08275	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM360_RS08285	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM360_RS08295	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM360_RS08305	COG0668	transmembrane transport
AM360_RS08310	COG1126	abc transporter atp-binding protein
AM360_RS08315	COG0765	amino acid transport
AM360_RS08320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS08335	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM360_RS08340	COG2194	sulfuric ester hydrolase activity
AM360_RS08350	COG1321	iron dependent repressor
AM360_RS08355	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM360_RS08360	COG2723	6-phospho-beta-galactosidase activity
AM360_RS08365	COG2188	Transcriptional regulator
AM360_RS08370	COG1376	ErfK ybiS ycfS ynhG family protein
AM360_RS08375	COG2365	Tyrosine phosphatase family
AM360_RS08380	COG0488	(ABC) transporter
AM360_RS08395	COG2271	Major facilitator Superfamily
AM360_RS08400	COG1609	Transcriptional regulator
AM360_RS08410	COG0561	phosphatase activity
AM360_RS08415	COG1882	Formate acetyltransferase
AM360_RS08420	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM360_RS08425	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM360_RS08430	COG0303	'Molybdopterin
AM360_RS08445	COG0747	negative chemotaxis
AM360_RS08470	COG2223	nitrite transmembrane transporter activity
AM360_RS08480	COG2133	pyrroloquinoline quinone binding
AM360_RS08485	COG0625	glutathione transferase activity
AM360_RS08490	COG1686	Belongs to the peptidase S11 family
AM360_RS08495	COG1349	DNA-binding transcription factor activity
AM360_RS08500	COG0671	phosphoesterase, PA-phosphatase related
AM360_RS08510	COG2814	Major facilitator Superfamily
AM360_RS08515	COG0561	phosphatase activity
AM360_RS08520	COG0738	Major facilitator superfamily
AM360_RS08525	COG3226	Transcriptional regulator
AM360_RS08530	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM360_RS08540	COG3344	reverse transcriptase
AM360_RS08580	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM360_RS08615	COG4695	Portal protein
AM360_RS08800	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM360_RS08805	COG3842	ATPase activity
AM360_RS08810	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM360_RS08815	COG1177	transmembrane transport
AM360_RS08830	COG0745	RESPONSE REGULATOR receiver
AM360_RS08835	COG5002	protein histidine kinase activity
AM360_RS08840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS08845	COG4160	amino acid transport
AM360_RS08850	COG4215	(ABC) transporter
AM360_RS08855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS08860	COG1126	abc transporter atp-binding protein
AM360_RS08875	COG2203	Gaf domain
AM360_RS08875	COG4251	negative regulation of phosphorylation
AM360_RS08875	COG5001	Diguanylate cyclase
AM360_RS08875	COG3706	GGDEF domain
AM360_RS08880	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM360_RS08885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM360_RS08890	COG0702	epimerase
AM360_RS08895	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AM360_RS08900	COG0028	Belongs to the TPP enzyme family
AM360_RS08915	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM360_RS08925	COG2431	L-lysine efflux transmembrane transporter activity
AM360_RS08935	COG3593	DNA synthesis involved in DNA repair
AM360_RS08940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS08955	COG1278	Cold shock
AM360_RS08965	COG0542	response to heat
AM360_RS08980	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AM360_RS08985	COG4988	ABC transporter
AM360_RS08990	COG0492	ferredoxin-NADP+ reductase activity
AM360_RS09005	COG1674	ftsk spoiiie
AM360_RS09005	COG1178	ABC-type Fe3 transport system permease component
AM360_RS09015	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AM360_RS09025	COG0243	molybdopterin cofactor binding
AM360_RS09030	COG0437	4 iron, 4 sulfur cluster binding
AM360_RS09035	COG3302	dmso reductase anchor subunit
AM360_RS09045	COG0477	Major facilitator Superfamily
AM360_RS09050	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM360_RS09055	COG1882	Formate acetyltransferase
AM360_RS09060	COG2116	formate transmembrane transporter activity
AM360_RS09065	COG1944	ATP diphosphatase activity
AM360_RS09070	COG2323	membrane
AM360_RS09090	COG0539	negative regulation of cytoplasmic translation
AM360_RS09100	COG2333	competence protein COMEC
AM360_RS09100	COG0658	competence protein
AM360_RS09115	COG3214	Protein conserved in bacteria
AM360_RS09130	COG3173	Aminoglycoside phosphotransferase
AM360_RS09135	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM360_RS09140	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM360_RS09150	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AM360_RS09160	COG2989	Protein conserved in bacteria
AM360_RS09170	COG3108	Peptidase M15
AM360_RS09175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM360_RS09180	COG1448	Aminotransferase
AM360_RS09195	COG1522	sequence-specific DNA binding
AM360_RS09205	COG0814	amino acid
AM360_RS09215	COG1473	amidohydrolase
AM360_RS09225	COG0308	aminopeptidase N
AM360_RS09235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM360_RS09240	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS09245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM360_RS09250	COG0431	NADPH-dependent FMN reductase
AM360_RS09265	COG0633	Ferredoxin
AM360_RS09265	COG3217	Mosc domain protein beta barrel domain protein
AM360_RS09275	COG0488	(ABC) transporter
AM360_RS09280	COG2995	paraquat-inducible protein a
AM360_RS09285	COG3008	intermembrane lipid transfer
AM360_RS09285	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM360_RS09290	COG3009	Protein conserved in bacteria
AM360_RS09300	COG3130	regulation of translation
AM360_RS09310	COG1067	ATP-dependent peptidase activity
AM360_RS09335	COG3070	regulator of competence-specific genes
AM360_RS09340	COG1289	transmembrane transporter activity
AM360_RS09345	COG3304	Inner membrane component domain
AM360_RS09350	COG0210	DNA helicase
AM360_RS09360	COG1832	CoA-binding protein
AM360_RS09375	COG1881	PFAM PEBP family protein
AM360_RS09380	COG2207	Transcriptional regulator
AM360_RS09395	COG0670	Belongs to the BI1 family
AM360_RS09410	COG2200	EAL domain
AM360_RS09415	COG2200	EAL domain
AM360_RS09425	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM360_RS09430	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS09435	COG4638	Rieske (2fe-2S)
AM360_RS09440	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM360_RS09450	COG0473	3-isopropylmalate dehydrogenase activity
AM360_RS09455	COG0583	DNA-binding transcription factor activity
AM360_RS09460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM360_RS09465	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS09470	COG1396	sequence-specific DNA binding
AM360_RS09470	COG1917	Cupin 2, conserved barrel domain protein
AM360_RS09475	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AM360_RS09480	COG0174	glutamine synthetase
AM360_RS09490	COG0531	amino acid
AM360_RS09505	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS09530	COG3729	General stress protein
AM360_RS09540	COG2233	PERMEase
AM360_RS09575	COG1309	transcriptional regulator
AM360_RS09590	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM360_RS09600	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM360_RS09620	COG1702	phosphate starvation-inducible protein PhoH
AM360_RS09625	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM360_RS09635	COG1335	isochorismatase
AM360_RS09645	COG0583	DNA-binding transcription factor activity
AM360_RS09675	COG3381	protein complex oligomerization
AM360_RS09715	COG5645	(Lipo)protein
AM360_RS09735	COG1560	Kdo2-lipid A biosynthetic process
AM360_RS09785	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM360_RS09805	COG2814	Major facilitator Superfamily
AM360_RS09810	COG0583	DNA-binding transcription factor activity
AM360_RS09815	COG1530	ribonuclease E activity
AM360_RS09830	COG1399	metal-binding, possibly nucleic acid-binding protein
AM360_RS09850	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM360_RS09865	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM360_RS09870	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM360_RS09875	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AM360_RS09885	COG0470	DNA polymerase III
AM360_RS09890	COG0084	hydrolase, TatD family'
AM360_RS09900	COG0537	adenosine 5'-monophosphoramidase activity
AM360_RS09905	COG5633	Lipoprotein
AM360_RS09935	COG1252	NADH dehydrogenase
AM360_RS09940	COG3134	Outer membrane lipoprotein
AM360_RS09950	COG1309	transcriptional regulator
AM360_RS09960	COG1376	ErfK ybiS ycfS ynhG family protein
AM360_RS09960	COG1388	LysM domain
AM360_RS09965	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AM360_RS09970	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM360_RS09980	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM360_RS09990	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AM360_RS10000	COG0318	PFAM AMP-dependent synthetase and ligase
AM360_RS10015	COG1177	transmembrane transport
AM360_RS10035	COG2850	peptidyl-arginine hydroxylation
AM360_RS10040	COG2205	protein histidine kinase activity
AM360_RS10060	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM360_RS10080	COG1187	pseudouridine synthase activity
AM360_RS10085	COG0538	isocitrate dehydrogenase activity
AM360_RS10090	COG0640	Transcriptional regulator
AM360_RS10105	COG3813	Protein conserved in bacteria
AM360_RS10110	COG1063	alcohol dehydrogenase
AM360_RS10115	COG3729	General stress protein
AM360_RS10120	COG3685	Protein conserved in bacteria
AM360_RS10125	COG3685	Protein conserved in bacteria
AM360_RS10130	COG3546	catalase activity
AM360_RS10135	COG1271	oxidase subunit
AM360_RS10140	COG1294	oxidase, subunit
AM360_RS10165	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM360_RS10170	COG0583	DNA-binding transcription factor activity
AM360_RS10175	COG3706	GGDEF domain
AM360_RS10180	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AM360_RS10195	COG1560	Kdo2-lipid A biosynthetic process
AM360_RS10205	COG3182	Iron-regulated membrane protein
AM360_RS10225	COG2203	Gaf domain
AM360_RS10225	COG2199	diguanylate cyclase activity
AM360_RS10230	COG3042	response to heat
AM360_RS10235	COG3189	MarR family transcriptional regulator
AM360_RS10240	COG1683	Conserved Protein
AM360_RS10245	COG0504	CTP synthase activity
AM360_RS10250	COG2807	transmembrane transport
AM360_RS10255	COG2207	Transcriptional regulator
AM360_RS10265	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM360_RS10270	COG0859	PFAM glycosyl transferase family 9
AM360_RS10285	COG3344	reverse transcriptase
AM360_RS10290	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM360_RS10295	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM360_RS10300	COG0583	DNA-binding transcription factor activity
AM360_RS10305	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS10325	COG0386	Belongs to the glutathione peroxidase family
AM360_RS10340	COG2766	serine protein kinase
AM360_RS10345	COG3713	MltA-interacting MipA family protein
AM360_RS10350	COG0656	L-ascorbic acid biosynthetic process
AM360_RS10370	COG3139	Protein of unknown function (DUF1315)
AM360_RS10385	COG1063	alcohol dehydrogenase
AM360_RS10390	COG2271	Major facilitator Superfamily
AM360_RS10395	COG1063	alcohol dehydrogenase
AM360_RS10400	COG0191	fructose-bisphosphate aldolase activity
AM360_RS10405	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS10410	COG0667	Aldo Keto reductase
AM360_RS10415	COG1349	DNA-binding transcription factor activity
AM360_RS10420	COG2814	Major facilitator Superfamily
AM360_RS10425	COG1335	isochorismatase
AM360_RS10430	COG0252	asparaginase activity
AM360_RS10435	COG0616	signal peptide processing
AM360_RS10440	COG0778	Nitroreductase
AM360_RS10460	COG0709	Synthesizes selenophosphate from selenide and ATP
AM360_RS10465	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM360_RS10470	COG0604	alcohol dehydrogenase
AM360_RS10470	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS10470	COG3321	synthase
AM360_RS10475	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM360_RS10480	COG0494	nUDIX hydrolase
AM360_RS10485	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM360_RS10490	COG2897	thiosulfate sulfurtransferase activity
AM360_RS10495	COG4136	ATPase activity
AM360_RS10500	COG4135	transport system, permease component
AM360_RS10505	COG4134	Bacterial extracellular solute-binding protein
AM360_RS10510	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM360_RS10515	COG0398	Pfam SNARE associated Golgi protein
AM360_RS10520	COG0398	Pfam SNARE associated Golgi protein
AM360_RS10525	COG0708	Exodeoxyribonuclease III
AM360_RS10535	COG3138	arginine N-succinyltransferase
AM360_RS10545	COG3724	N-succinylarginine dihydrolase activity
AM360_RS10555	COG3678	ATP-independent chaperone mediated protein folding
AM360_RS10560	COG0322	excinuclease ABC activity
AM360_RS10570	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM360_RS10575	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS10580	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS10585	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM360_RS10590	COG1917	Cupin 2, conserved barrel domain protein
AM360_RS10590	COG2169	Transcriptional regulator
AM360_RS10595	COG1486	melibiose metabolic process
AM360_RS10605	COG0753	catalase activity
AM360_RS10615	COG1823	symporter activity
AM360_RS10620	COG1988	membrane-bound metal-dependent
AM360_RS10625	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS10630	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM360_RS10660	COG0727	PFAM Uncharacterised protein family (UPF0153)
AM360_RS10665	COG3047	cAMP biosynthetic process
AM360_RS10675	COG4774	siderophore transport
AM360_RS10730	COG0134	indole-3-glycerol-phosphate synthase activity
AM360_RS10730	COG0135	phosphoribosylanthranilate isomerase activity
AM360_RS10735	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM360_RS10735	COG0512	Glutamine amidotransferase of anthranilate synthase
AM360_RS10740	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM360_RS10750	COG0009	L-threonylcarbamoyladenylate synthase
AM360_RS10760	COG0583	DNA-binding transcription factor activity
AM360_RS10770	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
AM360_RS10775	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS10785	COG0616	signal peptide processing
AM360_RS10820	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM360_RS10830	COG0671	phosphoesterase, PA-phosphatase related
AM360_RS10835	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AM360_RS10840	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AM360_RS10850	COG0023	Translation Initiation Factor
AM360_RS10860	COG1349	DNA-binding transcription factor activity
AM360_RS10875	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM360_RS10875	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM360_RS10880	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AM360_RS10890	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM360_RS10905	COG4171	peptide transport system, permease
AM360_RS11015	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM360_RS11070	COG3728	DNA packaging
AM360_RS11070	COG5484	DNA packaging
AM360_RS11160	COG1196	nuclear chromosome segregation
AM360_RS11215	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM360_RS11240	COG3344	reverse transcriptase
AM360_RS11245	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM360_RS11250	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM360_RS11260	COG2135	peptidase activity
AM360_RS11275	COG0702	epimerase
AM360_RS11290	COG1473	amidohydrolase
AM360_RS11300	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM360_RS11305	COG1842	Phage shock protein A
AM360_RS11315	COG1983	PspC domain protein
AM360_RS11325	COG3106	COG3106 Predicted ATPase
AM360_RS11335	COG0583	DNA-binding transcription factor activity
AM360_RS11340	COG1486	melibiose metabolic process
AM360_RS11350	COG3180	Ammonia monooxygenase
AM360_RS11355	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AM360_RS11360	COG4948	Mandelate Racemase Muconate Lactonizing
AM360_RS11365	COG2866	Carboxypeptidase
AM360_RS11370	COG4166	transmembrane transport
AM360_RS11400	COG0656	L-ascorbic acid biosynthetic process
AM360_RS11420	COG0583	DNA-binding transcription factor activity
AM360_RS11425	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS11430	COG1078	dGTPase activity
AM360_RS11435	COG0693	protein deglycase activity
AM360_RS11440	COG0582	viral genome integration into host DNA
AM360_RS11540	COG0484	heat shock protein binding
AM360_RS11550	COG3772	lysozyme
AM360_RS11570	COG1783	phage Terminase large subunit
AM360_RS11575	COG3567	Phage-associated protein, HI1409 family
AM360_RS11655	COG1196	nuclear chromosome segregation
AM360_RS11655	COG0741	lytic transglycosylase activity
AM360_RS11655	COG0739	heme binding
AM360_RS11770	COG2885	chlorophyll binding
AM360_RS11870	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS11875	COG1309	transcriptional regulator
AM360_RS11880	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS11900	COG0583	DNA-binding transcription factor activity
AM360_RS11925	COG0604	alcohol dehydrogenase
AM360_RS11930	COG0436	Aminotransferase
AM360_RS11945	COG2011	ABC-type metal ion transport system permease component
AM360_RS11950	COG1448	Aminotransferase
AM360_RS11960	COG1522	sequence-specific DNA binding
AM360_RS11965	COG1113	amino acid transport
AM360_RS11980	COG0673	inositol 2-dehydrogenase activity
AM360_RS11985	COG1349	DNA-binding transcription factor activity
AM360_RS12005	COG0513	Belongs to the DEAD box helicase family
AM360_RS12015	COG0589	response to stress
AM360_RS12025	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM360_RS12030	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AM360_RS12030	COG1013	pyruvate-flavodoxin oxidoreductase activity
AM360_RS12030	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM360_RS12030	COG0674	pyruvate-flavodoxin oxidoreductase activity
AM360_RS12040	COG3042	response to heat
AM360_RS12045	COG3187	Heat shock protein
AM360_RS12050	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AM360_RS12055	COG0586	Pfam SNARE associated Golgi protein
AM360_RS12060	COG2911	Protein conserved in bacteria
AM360_RS12070	COG3784	Protein of unknown function (DUF1318)
AM360_RS12075	COG2207	Transcriptional regulator
AM360_RS12080	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS12105	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS12105	COG2030	dehydratase
AM360_RS12110	COG3396	Phenylacetate-CoA oxygenase
AM360_RS12115	COG3460	Phenylacetate-CoA oxygenase
AM360_RS12120	COG3396	Phenylacetate-CoA oxygenase
AM360_RS12125	COG2151	metal-sulfur cluster biosynthetic enzyme
AM360_RS12130	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM360_RS12135	COG1024	Enoyl-CoA hydratase
AM360_RS12140	COG1024	Enoyl-CoA hydratase
AM360_RS12145	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM360_RS12150	COG2050	protein possibly involved in aromatic compounds catabolism
AM360_RS12155	COG0183	Belongs to the thiolase family
AM360_RS12160	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AM360_RS12165	COG3327	negative regulation of DNA-templated transcription, initiation
AM360_RS12170	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM360_RS12185	COG1643	Atp-dependent helicase
AM360_RS12190	COG4122	O-methyltransferase activity
AM360_RS12215	COG0583	DNA-binding transcription factor activity
AM360_RS12220	COG0667	Aldo Keto reductase
AM360_RS12225	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM360_RS12230	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM360_RS12235	COG3138	arginine N-succinyltransferase
AM360_RS12240	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS12245	COG3724	N-succinylarginine dihydrolase activity
AM360_RS12250	COG2988	succinylglutamate desuccinylase activity
AM360_RS12255	COG1113	amino acid transport
AM360_RS12260	COG0477	Major facilitator Superfamily
AM360_RS12265	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM360_RS12270	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS12275	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM360_RS12280	COG0401	homolog of Blt101
AM360_RS12285	COG5562	phage envelope protein
AM360_RS12290	COG0425	Belongs to the sulfur carrier protein TusA family
AM360_RS12295	COG2391	methyltransferase activity
AM360_RS12320	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM360_RS12325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS12325	COG1263	PTS System
AM360_RS12330	COG1609	Transcriptional regulator
AM360_RS12335	COG5339	Protein conserved in bacteria
AM360_RS12340	COG1482	cell wall glycoprotein biosynthetic process
AM360_RS12345	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM360_RS12345	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM360_RS12350	COG0114	fumarate hydratase activity
AM360_RS12360	COG2205	protein histidine kinase activity
AM360_RS12370	COG0745	RESPONSE REGULATOR receiver
AM360_RS12375	COG3136	membrane protein required for alginate biosynthesis
AM360_RS12385	COG0531	amino acid
AM360_RS12405	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AM360_RS12410	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AM360_RS12425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM360_RS12440	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AM360_RS12445	COG1473	amidohydrolase
AM360_RS12450	COG1473	amidohydrolase
AM360_RS12460	COG0583	DNA-binding transcription factor activity
AM360_RS12465	COG2840	Smr protein MutS2
AM360_RS12470	COG1414	Transcriptional regulator
AM360_RS12480	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM360_RS12485	COG0183	Belongs to the thiolase family
AM360_RS12495	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AM360_RS12500	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM360_RS12520	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM360_RS12520	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM360_RS12545	COG4565	transcriptional regulatory protein
AM360_RS12550	COG3290	protein histidine kinase activity
AM360_RS12575	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM360_RS12585	COG0679	Auxin Efflux Carrier
AM360_RS12615	COG0628	permease
AM360_RS12640	COG3591	Belongs to the peptidase S1B family
AM360_RS12655	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AM360_RS12660	COG2814	Major facilitator Superfamily
AM360_RS12665	COG0583	DNA-binding transcription factor activity
AM360_RS12670	COG1940	carbohydrate kinase activity
AM360_RS12675	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM360_RS12690	COG3302	dmso reductase anchor subunit
AM360_RS12695	COG0437	4 iron, 4 sulfur cluster binding
AM360_RS12715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM360_RS12730	COG2271	Major facilitator Superfamily
AM360_RS12735	COG0246	Mannitol dehydrogenase
AM360_RS12740	COG0589	response to stress
AM360_RS12745	COG1802	Transcriptional regulator
AM360_RS12750	COG4221	oxidoreductase activity
AM360_RS12765	COG2207	Transcriptional regulator
AM360_RS12770	COG2135	peptidase activity
AM360_RS12775	COG2197	response regulator
AM360_RS12795	COG3708	Transcriptional regulator
AM360_RS12795	COG2207	Transcriptional regulator
AM360_RS12800	COG2610	gluconate transmembrane transporter activity
AM360_RS12805	COG3622	Belongs to the hyi family
AM360_RS12810	COG0235	Class ii aldolase
AM360_RS12815	COG3395	kinase activity
AM360_RS12820	COG2084	Dehydrogenase
AM360_RS12825	COG1349	DNA-binding transcription factor activity
AM360_RS12840	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AM360_RS12845	COG2223	nitrite transmembrane transporter activity
AM360_RS12880	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AM360_RS12885	COG0683	leucine binding
AM360_RS12900	COG1129	ABC transporter
AM360_RS12905	COG0410	ABC transporter
AM360_RS12915	COG2814	Major facilitator Superfamily
AM360_RS12920	COG0697	spore germination
AM360_RS12930	COG4977	sequence-specific DNA binding
AM360_RS12955	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS12960	COG2731	YhcH YjgK YiaL family protein
AM360_RS12975	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AM360_RS12985	COG3395	kinase activity
AM360_RS12990	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AM360_RS12995	COG1349	DNA-binding transcription factor activity
AM360_RS13000	COG0039	L-malate dehydrogenase activity
AM360_RS13010	COG0583	DNA-binding transcription factor activity
AM360_RS13015	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS13030	COG2199	diguanylate cyclase activity
AM360_RS13110	COG0477	Major facilitator Superfamily
AM360_RS13120	COG2070	2-Nitropropane dioxygenase
AM360_RS13125	COG2011	ABC-type metal ion transport system permease component
AM360_RS13145	COG4628	conserved protein (DUF2132)
AM360_RS13160	COG2207	Transcriptional regulator
AM360_RS13190	COG2233	PERMEase
AM360_RS13195	COG3195	allantoin biosynthetic process
AM360_RS13195	COG3648	Uricase
AM360_RS13200	COG2351	hydroxyisourate hydrolase activity
AM360_RS13205	COG1396	sequence-specific DNA binding
AM360_RS13210	COG3550	peptidyl-serine autophosphorylation
AM360_RS13215	COG1649	PFAM Uncharacterised BCR, COG1649
AM360_RS13230	COG3188	usher protein
AM360_RS13265	COG3300	MHYT domain
AM360_RS13265	COG5001	Diguanylate cyclase
AM360_RS13270	COG2819	hydrolase of the alpha beta superfamily
AM360_RS13280	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS13280	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS13285	COG2814	Major facilitator Superfamily
AM360_RS13295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS13295	COG1263	PTS System
AM360_RS13300	COG2186	Transcriptional regulator
AM360_RS13320	COG3835	regulator
AM360_RS13325	COG1929	Belongs to the glycerate kinase type-1 family
AM360_RS13370	COG0738	Major facilitator superfamily
AM360_RS13375	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS13380	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM360_RS13385	COG1349	DNA-binding transcription factor activity
AM360_RS13400	COG1349	DNA-binding transcription factor activity
AM360_RS13405	COG4977	sequence-specific DNA binding
AM360_RS13425	COG4977	sequence-specific DNA binding
AM360_RS13450	COG0667	Aldo Keto reductase
AM360_RS13455	COG3386	PFAM SMP-30 Gluconolaconase
AM360_RS13460	COG0667	Aldo Keto reductase
AM360_RS13465	COG0667	Aldo Keto reductase
AM360_RS13475	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AM360_RS13475	COG0456	acetyltransferase
AM360_RS13505	COG1652	LysM domain
AM360_RS13535	COG1609	Transcriptional regulator
AM360_RS13545	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS13560	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AM360_RS13570	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM360_RS13575	COG0583	DNA-binding transcription factor activity
AM360_RS13580	COG0583	DNA-binding transcription factor activity
AM360_RS13595	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS13595	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS13595	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM360_RS13600	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS13615	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM360_RS13620	COG3037	sugar-specific permease SgaT UlaA
AM360_RS13630	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS13635	COG1609	Transcriptional regulator
AM360_RS13645	COG2223	nitrite transmembrane transporter activity
AM360_RS13675	COG0477	Major facilitator Superfamily
AM360_RS13680	COG4529	Protein conserved in bacteria
AM360_RS13685	COG1902	pentaerythritol trinitrate reductase activity
AM360_RS13695	COG0583	DNA-binding transcription factor activity
AM360_RS13700	COG2070	2-Nitropropane dioxygenase
AM360_RS13710	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AM360_RS13720	COG0765	amino acid transport
AM360_RS13765	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM360_RS13785	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM360_RS13800	COG0583	DNA-binding transcription factor activity
AM360_RS13815	COG2207	Transcriptional regulator
AM360_RS13830	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AM360_RS13850	COG0406	alpha-ribazole phosphatase activity
AM360_RS13890	COG1953	Uracil, thiamine, allantoin
AM360_RS13895	COG0402	S-adenosylhomocysteine deaminase activity
AM360_RS13900	COG3706	GGDEF domain
AM360_RS13915	COG0673	inositol 2-dehydrogenase activity
AM360_RS13925	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AM360_RS13930	COG1116	anion transmembrane transporter activity
AM360_RS13935	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM360_RS13940	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM360_RS13945	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM360_RS13950	COG0076	glutamate decarboxylase activity
AM360_RS13965	COG2205	protein histidine kinase activity
AM360_RS13975	COG0596	Alpha beta hydrolase
AM360_RS14015	COG0519	Catalyzes the synthesis of GMP from XMP
AM360_RS14015	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AM360_RS14035	COG0583	DNA-binding transcription factor activity
AM360_RS14045	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM360_RS14050	COG1285	pathogenesis
AM360_RS14060	COG2814	Major facilitator Superfamily
AM360_RS14065	COG0583	DNA-binding transcription factor activity
AM360_RS14070	COG0243	molybdopterin cofactor binding
AM360_RS14075	COG3781	membrane
AM360_RS14100	COG1764	response to oxidative stress
AM360_RS14110	COG3111	PFAM Bacterial OB fold (BOF) protein
AM360_RS14130	COG2323	membrane
AM360_RS14140	COG0366	Alpha amylase catalytic
AM360_RS14150	COG3685	Protein conserved in bacteria
AM360_RS14170	COG3729	General stress protein
AM360_RS14175	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS14210	COG0488	(ABC) transporter
AM360_RS14225	COG1064	alcohol dehydrogenase
AM360_RS14230	COG0747	negative chemotaxis
AM360_RS14240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS14250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS14260	COG2814	Major facilitator Superfamily
AM360_RS14270	COG2326	polyphosphate kinase activity
AM360_RS14285	COG2864	formate dehydrogenase
AM360_RS14290	COG0437	4 iron, 4 sulfur cluster binding
AM360_RS14315	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AM360_RS14325	COG3485	protocatechuate 3,4-dioxygenase
AM360_RS14330	COG4829	muconolactone delta-isomerase
AM360_RS14335	COG4948	Mandelate Racemase Muconate Lactonizing
AM360_RS14340	COG1414	Transcriptional regulator
AM360_RS14360	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM360_RS14365	COG1140	nitrate reductase beta subunit
AM360_RS14370	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM360_RS14375	COG2181	nitrate reductase activity
AM360_RS14380	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AM360_RS14385	COG1178	ABC-type Fe3 transport system permease component
AM360_RS14390	COG1840	ABC-type Fe3 transport system, periplasmic component
AM360_RS14395	COG3842	ATPase activity
AM360_RS14400	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM360_RS14415	COG2211	Major facilitator Superfamily
AM360_RS14430	COG0625	glutathione transferase activity
AM360_RS14440	COG1126	abc transporter atp-binding protein
AM360_RS14445	COG0765	amino acid transport
AM360_RS14455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS14460	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS14465	COG1473	amidohydrolase
AM360_RS14470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS14475	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AM360_RS14500	COG4772	TonB-dependent receptor
AM360_RS14505	COG1228	amidohydrolase
AM360_RS14510	COG3691	Protein conserved in bacteria
AM360_RS14525	COG2130	NADP-dependent
AM360_RS14535	COG1247	-acetyltransferase
AM360_RS14540	COG3238	Protein conserved in bacteria
AM360_RS14550	COG0747	negative chemotaxis
AM360_RS14555	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS14590	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS14595	COG1177	transmembrane transport
AM360_RS14600	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM360_RS14605	COG3842	ATPase activity
AM360_RS14610	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM360_RS14615	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM360_RS14620	COG1271	oxidase subunit
AM360_RS14625	COG1294	oxidase, subunit
AM360_RS14645	COG0826	peptidase U32
AM360_RS14655	COG1396	sequence-specific DNA binding
AM360_RS14660	COG3135	benzoate transporter
AM360_RS14665	COG3708	Transcriptional regulator
AM360_RS14665	COG2207	Transcriptional regulator
AM360_RS14680	COG0500	methyltransferase
AM360_RS14685	COG1275	C4-dicarboxylate transporter malic acid transport protein
AM360_RS14690	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM360_RS14695	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM360_RS14710	COG2272	Belongs to the type-B carboxylesterase lipase family
AM360_RS14715	COG5383	Protein conserved in bacteria
AM360_RS14720	COG3485	protocatechuate 3,4-dioxygenase
AM360_RS14725	COG3485	protocatechuate 3,4-dioxygenase
AM360_RS14730	COG0583	DNA-binding transcription factor activity
AM360_RS14750	COG3038	cytochrome b561
AM360_RS14770	COG2814	Major facilitator Superfamily
AM360_RS14780	COG0673	inositol 2-dehydrogenase activity
AM360_RS14790	COG2723	6-phospho-beta-galactosidase activity
AM360_RS14825	COG4659	FMN binding
AM360_RS14835	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM360_RS14850	COG0625	glutathione transferase activity
AM360_RS14855	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AM360_RS14870	COG3895	Periplasmic Protein
AM360_RS14885	COG3706	GGDEF domain
AM360_RS14900	COG1566	PFAM secretion protein HlyD family protein
AM360_RS14905	COG1289	transmembrane transporter activity
AM360_RS14910	COG2032	superoxide dismutase activity
AM360_RS14915	COG4989	oxidoreductase activity
AM360_RS14920	COG3313	Fe-S protein
AM360_RS14925	COG1309	transcriptional regulator
AM360_RS14930	COG1902	pentaerythritol trinitrate reductase activity
AM360_RS14935	COG0346	lactoylglutathione lyase activity
AM360_RS14945	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AM360_RS14950	COG0791	NLP P60 protein
AM360_RS14965	COG2814	Major facilitator Superfamily
AM360_RS14975	COG0583	DNA-binding transcription factor activity
AM360_RS14980	COG2814	Major facilitator Superfamily
AM360_RS14985	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM360_RS14990	COG0307	riboflavin synthase, alpha
AM360_RS15045	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AM360_RS15075	COG1349	DNA-binding transcription factor activity
AM360_RS15080	COG0346	lactoylglutathione lyase activity
AM360_RS15105	COG0444	Belongs to the ABC transporter superfamily
AM360_RS15110	COG4608	Belongs to the ABC transporter superfamily
AM360_RS15170	COG0402	S-adenosylhomocysteine deaminase activity
AM360_RS15195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM360_RS15200	COG0277	FAD linked oxidase domain protein
AM360_RS15225	COG0583	DNA-binding transcription factor activity
AM360_RS15235	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM360_RS15245	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM360_RS15250	COG2610	gluconate transmembrane transporter activity
AM360_RS15255	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS15290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM360_RS15310	COG0745	RESPONSE REGULATOR receiver
AM360_RS15315	COG3850	Histidine kinase
AM360_RS15315	COG5002	protein histidine kinase activity
AM360_RS15330	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AM360_RS15355	COG3088	subunit of a heme lyase
AM360_RS15355	COG4235	cytochrome complex assembly
AM360_RS15360	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM360_RS15365	COG1138	Cytochrome C-type biogenesis protein
AM360_RS15380	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM360_RS15385	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM360_RS15390	COG4133	protoheme IX ABC transporter activity
AM360_RS15420	COG1175	transmembrane transport
AM360_RS15435	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM360_RS15440	COG3383	formate dehydrogenase (NAD+) activity
AM360_RS15445	COG1473	amidohydrolase
AM360_RS15475	COG1126	abc transporter atp-binding protein
AM360_RS15480	COG0765	amino acid transport
AM360_RS15500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS15505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS15510	COG1120	ATPase activity
AM360_RS15515	COG4774	siderophore transport
AM360_RS15520	COG1116	anion transmembrane transporter activity
AM360_RS15525	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM360_RS15545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS15550	COG0583	DNA-binding transcription factor activity
AM360_RS15570	COG2814	Major facilitator Superfamily
AM360_RS15605	COG1414	Transcriptional regulator
AM360_RS15610	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM360_RS15615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS15620	COG1120	ATPase activity
AM360_RS15630	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AM360_RS15635	COG2271	Major facilitator Superfamily
AM360_RS15640	COG1082	Xylose isomerase domain protein TIM barrel
AM360_RS15640	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AM360_RS15645	COG1309	transcriptional regulator
AM360_RS15670	COG1376	ErfK ybiS ycfS ynhG family protein
AM360_RS15685	COG0719	Fe-S assembly protein
AM360_RS15690	COG0396	ATPase activity
AM360_RS15695	COG0719	Fe-S assembly protein
AM360_RS15700	COG0316	Belongs to the HesB IscA family
AM360_RS15715	COG1309	transcriptional regulator
AM360_RS15720	COG1304	FMN binding
AM360_RS15745	COG0583	DNA-binding transcription factor activity
AM360_RS15755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS15760	COG1120	ATPase activity
AM360_RS15790	COG2261	transglycosylase associated protein
AM360_RS15795	COG2050	protein possibly involved in aromatic compounds catabolism
AM360_RS15800	COG0277	FAD linked oxidase domain protein
AM360_RS15800	COG0247	lactate metabolic process
AM360_RS15805	COG0628	permease
AM360_RS15815	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM360_RS15815	COG0574	Belongs to the PEP-utilizing enzyme family
AM360_RS15830	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM360_RS15835	COG4256	Hemin uptake protein
AM360_RS15845	COG0791	NLP P60 protein
AM360_RS15855	COG0386	Belongs to the glutathione peroxidase family
AM360_RS15875	COG0583	DNA-binding transcription factor activity
AM360_RS15895	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM360_RS15895	COG0072	phenylalanine-tRNA ligase activity
AM360_RS15935	COG3137	Salt-induced outer membrane protein
AM360_RS15940	COG1105	Belongs to the carbohydrate kinase PfkB family
AM360_RS15950	COG3001	Fructosamine kinase
AM360_RS15960	COG2350	Protein conserved in bacteria
AM360_RS15965	COG2353	YceI-like domain
AM360_RS15985	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM360_RS15995	COG0444	Belongs to the ABC transporter superfamily
AM360_RS16000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS16005	COG0601	transmembrane transport
AM360_RS16010	COG4166	transmembrane transport
AM360_RS16015	COG2095	MarC family integral membrane protein
AM360_RS16025	COG1454	alcohol dehydrogenase
AM360_RS16025	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS16030	COG1435	thymidine kinase activity
AM360_RS16035	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM360_RS16040	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM360_RS16045	COG0745	RESPONSE REGULATOR receiver
AM360_RS16050	COG1752	Esterase of the alpha-beta hydrolase superfamily
AM360_RS16060	COG0788	formyltetrahydrofolate deformylase activity
AM360_RS16095	COG1522	sequence-specific DNA binding
AM360_RS16105	COG2181	nitrate reductase activity
AM360_RS16110	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM360_RS16115	COG1140	nitrate reductase beta subunit
AM360_RS16120	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM360_RS16125	COG2223	nitrite transmembrane transporter activity
AM360_RS16130	COG3850	Histidine kinase
AM360_RS16135	COG2197	response regulator
AM360_RS16140	COG4932	domain protein
AM360_RS16145	COG0243	molybdopterin cofactor binding
AM360_RS16150	COG2146	nitrite reductase [NAD(P)H] activity
AM360_RS16150	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM360_RS16155	COG1116	anion transmembrane transporter activity
AM360_RS16165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM360_RS16170	COG3707	response regulator
AM360_RS16175	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AM360_RS16185	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM360_RS16190	COG4572	Cation transport regulator
AM360_RS16195	COG0387	Pfam Sodium calcium exchanger
AM360_RS16215	COG2890	protein-(glutamine-N5) methyltransferase activity
AM360_RS16250	COG0659	secondary active sulfate transmembrane transporter activity
AM360_RS16270	COG0012	GTP binding
AM360_RS16360	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AM360_RS16440	COG2885	chlorophyll binding
AM360_RS16470	COG3122	Protein conserved in bacteria
AM360_RS16485	COG0583	DNA-binding transcription factor activity
AM360_RS16515	COG0583	DNA-binding transcription factor activity
AM360_RS16545	COG1882	Formate acetyltransferase
AM360_RS16560	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM360_RS16565	COG0583	DNA-binding transcription factor activity
AM360_RS16605	COG2308	Evidence 4 Homologs of previously reported genes of
AM360_RS16615	COG4774	siderophore transport
AM360_RS16625	COG1619	proteins homologs of microcin C7 resistance protein MccF
AM360_RS16645	COG2719	SpoVR family
AM360_RS16675	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM360_RS16690	COG2894	cell division
AM360_RS16700	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AM360_RS16710	COG3065	identical protein binding
AM360_RS16720	COG1199	ATP-dependent helicase activity
AM360_RS16725	COG0251	oxidation-reduction process
AM360_RS16745	COG1760	l-serine dehydratase
AM360_RS16750	COG2200	EAL domain
AM360_RS16755	COG1253	flavin adenine dinucleotide binding
AM360_RS16760	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS16760	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS16765	COG3715	PTS system
AM360_RS16770	COG3716	PTS system mannose fructose sorbose family IID component
AM360_RS16790	COG2226	methyltransferase
AM360_RS16795	COG0768	penicillin binding
AM360_RS16835	COG1414	Transcriptional regulator
AM360_RS16840	COG2814	Major facilitator Superfamily
AM360_RS16860	COG1956	GAF domain-containing protein
AM360_RS16865	COG2995	paraquat-inducible protein a
AM360_RS16870	COG3008	intermembrane lipid transfer
AM360_RS16895	COG2990	Protein conserved in bacteria
AM360_RS16910	COG1276	copper resistance
AM360_RS16915	COG2372	response to copper ion
AM360_RS16925	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM360_RS16930	COG1770	oligopeptidase
AM360_RS16935	COG2979	Protein of unknown function (DUF533)
AM360_RS16940	COG3141	response to X-ray
AM360_RS16950	COG0800	Aldolase
AM360_RS16955	COG0129	dihydroxy-acid dehydratase activity
AM360_RS16960	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AM360_RS16975	COG1737	Transcriptional regulator
AM360_RS16985	COG1560	Kdo2-lipid A biosynthetic process
AM360_RS16990	COG0739	heme binding
AM360_RS16995	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AM360_RS17005	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM360_RS17030	COG0494	nUDIX hydrolase
AM360_RS17040	COG1335	isochorismatase
AM360_RS17045	COG1801	Protein of unknown function DUF72
AM360_RS17050	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AM360_RS17070	COG3102	Protein conserved in bacteria
AM360_RS17080	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AM360_RS17105	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS17115	COG1879	ABC-type sugar transport system periplasmic component
AM360_RS17125	COG1528	Iron-storage protein
AM360_RS17135	COG2211	Major facilitator Superfamily
AM360_RS17145	COG0477	Major facilitator Superfamily
AM360_RS17160	COG1528	Iron-storage protein
AM360_RS17170	COG0814	amino acid
AM360_RS17175	COG3012	SEC-C Motif Domain Protein
AM360_RS17175	COG3318	Belongs to the UPF0149 family
AM360_RS17210	COG2197	response regulator
AM360_RS17220	COG2197	response regulator
AM360_RS17225	COG1126	abc transporter atp-binding protein
AM360_RS17230	COG0765	amino acid transport
AM360_RS17240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS17245	COG0366	Alpha amylase catalytic
AM360_RS17275	COG2354	Protein conserved in bacteria
AM360_RS17280	COG0697	spore germination
AM360_RS17285	COG3727	T/G mismatch-specific endonuclease activity
AM360_RS17290	COG0270	DNA (cytosine-5-)-methyltransferase activity
AM360_RS17295	COG1418	mRNA catabolic process
AM360_RS17305	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM360_RS17325	COG0251	oxidation-reduction process
AM360_RS17360	COG0025	NhaP-type Na H and K H
AM360_RS17365	COG1309	transcriptional regulator
AM360_RS17370	COG0604	alcohol dehydrogenase
AM360_RS17390	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AM360_RS17400	COG0534	Mate efflux family protein
AM360_RS17410	COG0582	viral genome integration into host DNA
AM360_RS17515	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM360_RS17560	COG3706	GGDEF domain
AM360_RS17585	COG3615	Tellurite resistance protein tehB
AM360_RS17595	COG3300	MHYT domain
AM360_RS17595	COG5001	Diguanylate cyclase
AM360_RS17610	COG0477	Major facilitator Superfamily
AM360_RS17615	COG0095	Lipoate-protein ligase
AM360_RS17620	COG0583	DNA-binding transcription factor activity
AM360_RS17625	COG1942	4-Oxalocrotonate Tautomerase
AM360_RS17635	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AM360_RS17655	COG1289	transmembrane transporter activity
AM360_RS17665	COG3344	reverse transcriptase
AM360_RS17680	COG2925	Exonuclease
AM360_RS17690	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AM360_RS17695	COG0640	Transcriptional regulator
AM360_RS17700	COG0531	amino acid
AM360_RS17705	COG0583	DNA-binding transcription factor activity
AM360_RS17710	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM360_RS17735	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AM360_RS17760	COG0463	Glycosyl transferase, family 2
AM360_RS17770	COG1216	Glycosyl transferase, family 2
AM360_RS17770	COG1442	glycosyl transferase family 8
AM360_RS17775	COG0438	transferase activity, transferring glycosyl groups
AM360_RS17830	COG2244	polysaccharide biosynthetic process
AM360_RS17860	COG1088	dTDP-glucose 4,6-dehydratase activity
AM360_RS17885	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AM360_RS17920	COG1253	flavin adenine dinucleotide binding
AM360_RS17925	COG2982	Protein involved in outer membrane biogenesis
AM360_RS17940	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AM360_RS17945	COG0443	Heat shock 70 kDa protein
AM360_RS17950	COG5002	protein histidine kinase activity
AM360_RS17965	COG1301	dicarboxylic acid transport
AM360_RS17990	COG2205	protein histidine kinase activity
AM360_RS17995	COG0745	RESPONSE REGULATOR receiver
AM360_RS18000	COG0826	peptidase U32
AM360_RS18010	COG4608	Belongs to the ABC transporter superfamily
AM360_RS18015	COG0444	Belongs to the ABC transporter superfamily
AM360_RS18020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS18025	COG0601	transmembrane transport
AM360_RS18030	COG0747	negative chemotaxis
AM360_RS18035	COG4948	Mandelate Racemase Muconate Lactonizing
AM360_RS18040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM360_RS18050	COG1070	Carbohydrate kinase
AM360_RS18075	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AM360_RS18085	COG1830	Aldolase
AM360_RS18090	COG0351	phosphomethylpyrimidine kinase
AM360_RS18105	COG0583	DNA-binding transcription factor activity
AM360_RS18115	COG2252	PERMEase
AM360_RS18120	COG0583	DNA-binding transcription factor activity
AM360_RS18125	COG5455	response to cobalt ion
AM360_RS18145	COG4807	Protein conserved in bacteria
AM360_RS18155	COG3275	phosphorelay sensor kinase activity
AM360_RS18165	COG1174	glycine betaine transport
AM360_RS18170	COG1125	glycine betaine transport
AM360_RS18175	COG1174	glycine betaine transport
AM360_RS18180	COG1732	Glycine betaine
AM360_RS18185	COG1472	Belongs to the glycosyl hydrolase 3 family
AM360_RS18190	COG0277	FAD linked oxidase domain protein
AM360_RS18200	COG1686	Belongs to the peptidase S11 family
AM360_RS18210	COG0586	Pfam SNARE associated Golgi protein
AM360_RS18215	COG1538	Outer membrane efflux protein
AM360_RS18220	COG2723	6-phospho-beta-galactosidase activity
AM360_RS18235	COG3659	wide pore channel activity
AM360_RS18240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM360_RS18250	COG1346	cytolysis
AM360_RS18265	COG2949	membrane
AM360_RS18275	COG1129	ABC transporter
AM360_RS18295	COG2311	Membrane
AM360_RS18310	COG4771	TonB-dependent receptor
AM360_RS18320	COG0833	amino acid
AM360_RS18325	COG0583	DNA-binding transcription factor activity
AM360_RS18335	COG2855	membrane
AM360_RS18345	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS18345	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM360_RS18345	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS18350	COG1105	Belongs to the carbohydrate kinase PfkB family
AM360_RS18355	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS18355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS18385	COG1312	Catalyzes the dehydration of D-mannonate
AM360_RS18390	COG0246	Mannitol dehydrogenase
AM360_RS18395	COG0523	cobalamin synthesis protein
AM360_RS18400	COG0671	phosphoesterase, PA-phosphatase related
AM360_RS18405	COG0791	NLP P60 protein
AM360_RS18410	COG2200	EAL domain
AM360_RS18415	COG4166	transmembrane transport
AM360_RS18420	COG4174	ABC transporter (Permease)
AM360_RS18425	COG4239	(ABC) transporter, permease
AM360_RS18430	COG4172	Belongs to the ABC transporter superfamily
AM360_RS18440	COG2814	Major facilitator Superfamily
AM360_RS18445	COG1187	pseudouridine synthase activity
AM360_RS18450	COG1061	Type III restriction enzyme res subunit
AM360_RS18470	COG0494	nUDIX hydrolase
AM360_RS18475	COG1349	DNA-binding transcription factor activity
AM360_RS18500	COG0628	permease
AM360_RS18515	COG0659	secondary active sulfate transmembrane transporter activity
AM360_RS18520	COG2239	Acts as a magnesium transporter
AM360_RS18525	COG4615	Cyclic peptide transporter
AM360_RS18530	COG3145	DNA-N1-methyladenine dioxygenase activity
AM360_RS18535	COG2169	Transcriptional regulator
AM360_RS18535	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM360_RS18550	COG2198	Histidine kinase
AM360_RS18550	COG0642	Histidine kinase
AM360_RS18560	COG0784	Response regulator, receiver
AM360_RS18560	COG2205	protein histidine kinase activity
AM360_RS18590	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM360_RS18600	COG0584	glycerophosphoryl diester phosphodiesterase
AM360_RS18605	COG2271	Major facilitator Superfamily
AM360_RS18610	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM360_RS18620	COG0247	lactate metabolic process
AM360_RS18630	COG2271	Major facilitator Superfamily
AM360_RS18640	COG1414	Transcriptional regulator
AM360_RS18655	COG5464	transposase or invertase
AM360_RS18665	COG0318	PFAM AMP-dependent synthetase and ligase
AM360_RS18690	COG1169	isochorismate synthase
AM360_RS18695	COG2153	protein acetylation
AM360_RS18710	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM360_RS18715	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM360_RS18725	COG0839	Belongs to the complex I subunit 6 family
AM360_RS18775	COG0583	DNA-binding transcription factor activity
AM360_RS18780	COG0436	Aminotransferase
AM360_RS18790	COG0471	metal ion transport
AM360_RS18790	COG0490	domain, Protein
AM360_RS18795	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM360_RS18815	COG0857	belongs to the CobB CobQ family
AM360_RS18815	COG0280	phosphate acetyltransferase
AM360_RS18820	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AM360_RS18825	COG0622	Phosphoesterase
AM360_RS18830	COG0625	glutathione transferase activity
AM360_RS18835	COG0625	glutathione transferase activity
AM360_RS18840	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM360_RS18845	COG1090	epimerase
AM360_RS18855	COG4598	ABC transporter
AM360_RS18860	COG4160	amino acid transport
AM360_RS18880	COG0163	prenyltransferase activity
AM360_RS18885	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AM360_RS18890	COG1286	toxin biosynthetic process
AM360_RS18895	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AM360_RS18900	COG0285	dihydrofolate synthase activity
AM360_RS18910	COG0586	Pfam SNARE associated Golgi protein
AM360_RS18920	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM360_RS18940	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM360_RS18955	COG3101	peptidyl-lysine hydroxylation
AM360_RS18960	COG0730	response to heat
AM360_RS18985	COG2062	phosphohistidine phosphatase, SixA
AM360_RS19000	COG3691	Protein conserved in bacteria
AM360_RS19010	COG2853	Lipoprotein
AM360_RS19015	COG2116	formate transmembrane transporter activity
AM360_RS19035	COG0583	DNA-binding transcription factor activity
AM360_RS19040	COG0590	tRNA wobble adenosine to inosine editing
AM360_RS19045	COG2807	transmembrane transport
AM360_RS19050	COG0436	Aminotransferase
AM360_RS19060	COG3275	phosphorelay sensor kinase activity
AM360_RS19065	COG3279	Response regulator of the LytR AlgR family
AM360_RS19080	COG3961	Belongs to the TPP enzyme family
AM360_RS19085	COG0667	Aldo Keto reductase
AM360_RS19100	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM360_RS19105	COG2200	EAL domain
AM360_RS19105	COG2199	diguanylate cyclase activity
AM360_RS19120	COG3415	Transposase
AM360_RS19125	COG3415	Transposase
AM360_RS19155	COG0583	DNA-binding transcription factor activity
AM360_RS19160	COG0385	Bile acid
AM360_RS19165	COG3530	Putative quorum-sensing-regulated virulence factor
AM360_RS19185	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM360_RS19220	COG4319	ketosteroid isomerase
AM360_RS19230	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AM360_RS19235	COG4208	sulfate ABC transporter
AM360_RS19240	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AM360_RS19245	COG4150	thiosulfate binding
AM360_RS19255	COG2837	iron assimilation
AM360_RS19275	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM360_RS19365	COG4810	utilization protein
AM360_RS19375	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM360_RS19380	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM360_RS19385	COG5342	invasion associated locus B
AM360_RS19395	COG0493	'glutamate synthase
AM360_RS19395	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM360_RS19405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM360_RS19410	COG1393	Belongs to the ArsC family
AM360_RS19425	COG0400	carboxylic ester hydrolase activity
AM360_RS19430	COG1444	tRNA N-acetyltransferase activity
AM360_RS19435	COG2321	neutral zinc metallopeptidase
AM360_RS19445	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AM360_RS19455	COG2716	regulation of RNA biosynthetic process
AM360_RS19460	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AM360_RS19465	COG0628	permease
AM360_RS19470	COG4783	chaperone-mediated protein folding
AM360_RS19475	COG1393	Belongs to the ArsC family
AM360_RS19490	COG2233	PERMEase
AM360_RS19500	COG2723	6-phospho-beta-galactosidase activity
AM360_RS19515	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AM360_RS19530	COG2200	EAL domain
AM360_RS19550	COG0641	radical SAM
AM360_RS19555	COG3119	arylsulfatase activity
AM360_RS19565	COG0517	IMP dehydrogenase activity
AM360_RS19565	COG0516	GMP reductase activity
AM360_RS19575	COG1645	bacterial-type flagellum-dependent swarming motility
AM360_RS19595	COG2976	Protein conserved in bacteria
AM360_RS19625	COG4953	penicillin-binding protein 1C
AM360_RS19630	COG2373	Large extracellular alpha-helical protein
AM360_RS19635	COG2897	thiosulfate sulfurtransferase activity
AM360_RS19655	COG2975	iron-sulfur cluster assembly
AM360_RS19660	COG0633	Ferredoxin
AM360_RS19680	COG0822	iron-sulfur transferase activity
AM360_RS19710	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM360_RS19715	COG3683	transport system, periplasmic component
AM360_RS19720	COG3711	transcriptional antiterminator
AM360_RS19725	COG2814	Major facilitator Superfamily
AM360_RS19730	COG2017	converts alpha-aldose to the beta-anomer
AM360_RS19735	COG2814	Major facilitator Superfamily
AM360_RS19735	COG0477	Major facilitator Superfamily
AM360_RS19740	COG0457	Tetratricopeptide repeat
AM360_RS19745	COG1940	carbohydrate kinase activity
AM360_RS19750	COG2259	Doxx family
AM360_RS19765	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM360_RS19765	COG1017	nitric oxide dioxygenase activity
AM360_RS19770	COG0347	Belongs to the P(II) protein family
AM360_RS19775	COG2204	response regulator
AM360_RS19780	COG3170	Tfp pilus assembly protein FimV
AM360_RS19785	COG2205	protein histidine kinase activity
AM360_RS19790	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AM360_RS19790	COG0047	phosphoribosylformylglycinamidine synthase activity
AM360_RS19805	COG0560	Phosphoserine phosphatase
AM360_RS19810	COG1737	Transcriptional regulator
AM360_RS19815	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM360_RS19825	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AM360_RS19845	COG0681	Belongs to the peptidase S26 family
AM360_RS19855	COG3086	response to oxidative stress
AM360_RS19860	COG3026	antisigma factor binding
AM360_RS19865	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AM360_RS19875	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AM360_RS19885	COG0513	Belongs to the DEAD box helicase family
AM360_RS19900	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM360_RS19910	COG3118	belongs to the thioredoxin family
AM360_RS19915	COG3148	PFAM DTW domain containing protein
AM360_RS19925	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM360_RS19930	COG5544	Lipoprotein
AM360_RS19935	COG0477	Major facilitator Superfamily
AM360_RS19960	COG0542	response to heat
AM360_RS19975	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM360_RS19985	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM360_RS19990	COG1605	Chorismate mutase
AM360_RS19990	COG0077	Prephenate dehydratase
AM360_RS20000	COG0287	Prephenate dehydrogenase
AM360_RS20000	COG1605	Chorismate mutase
AM360_RS20005	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM360_RS20015	COG2199	diguanylate cyclase activity
AM360_RS20020	COG2885	chlorophyll binding
AM360_RS20055	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AM360_RS20060	COG4137	Cytochrome C assembly protein
AM360_RS20065	COG4536	flavin adenine dinucleotide binding
AM360_RS20085	COG0497	DNA recombination
AM360_RS20100	COG2867	negative regulation of translational initiation
AM360_RS20265	COG4695	Portal protein
AM360_RS20310	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM360_RS20345	COG4974	Belongs to the 'phage' integrase family
AM360_RS20370	COG2207	Transcriptional regulator
AM360_RS20370	COG3708	Transcriptional regulator
AM360_RS20375	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS20410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS20420	COG0235	Class ii aldolase
AM360_RS20430	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS20445	COG2197	response regulator
AM360_RS20450	COG3539	Fimbrial protein
AM360_RS20460	COG3188	usher protein
AM360_RS20480	COG3121	Chaperone
AM360_RS20485	COG3539	Fimbrial protein
AM360_RS20495	COG3284	Transcriptional regulator
AM360_RS20500	COG0583	DNA-binding transcription factor activity
AM360_RS20510	COG0640	Transcriptional regulator
AM360_RS20515	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM360_RS20530	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM360_RS20555	COG4575	ribosome binding
AM360_RS20560	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM360_RS20565	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM360_RS20570	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM360_RS20580	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM360_RS20595	COG4176	ABC-type proline glycine betaine transport system permease component
AM360_RS20605	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM360_RS20615	COG1846	Transcriptional regulator
AM360_RS20620	COG1566	PFAM secretion protein HlyD family protein
AM360_RS20625	COG2814	Major facilitator Superfamily
AM360_RS20630	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AM360_RS20650	COG1238	metal cluster binding
AM360_RS20655	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM360_RS20660	COG2823	Periplasmic or secreted lipoprotein
AM360_RS20690	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AM360_RS20715	COG1546	Belongs to the CinA family
AM360_RS20725	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM360_RS20730	COG1121	(ABC) transporter
AM360_RS20740	COG2951	lytic endotransglycosylase activity
AM360_RS20745	COG3730	PTS system glucitol sorbitol-specific
AM360_RS20750	COG3732	PTS system glucitol sorbitol-specific
AM360_RS20760	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS20765	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS20770	COG1349	DNA-binding transcription factor activity
AM360_RS20800	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
AM360_RS20805	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AM360_RS20810	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM360_RS20815	COG1609	Transcriptional regulator
AM360_RS20820	COG1263	PTS System
AM360_RS20820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS20825	COG2723	6-phospho-beta-galactosidase activity
AM360_RS20835	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM360_RS20845	COG3260	NADH ubiquinone oxidoreductase 20
AM360_RS20850	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM360_RS20855	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM360_RS20855	COG3261	NADH dehydrogenase
AM360_RS20860	COG0650	Formate hydrogenlyase subunit 4
AM360_RS20865	COG0651	ATP synthesis coupled electron transport
AM360_RS20870	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM360_RS20890	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AM360_RS20895	COG0298	carbon dioxide binding
AM360_RS20900	COG0409	Hydrogenase expression formation protein
AM360_RS20905	COG0309	Hydrogenase expression formation protein (HypE)
AM360_RS20915	COG2723	6-phospho-beta-galactosidase activity
AM360_RS20925	COG4580	involved in the transport of maltose and maltodextrins
AM360_RS20935	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS20940	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS20945	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS20950	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM360_RS20955	COG1940	carbohydrate kinase activity
AM360_RS20960	COG1609	Transcriptional regulator
AM360_RS20965	COG0803	Belongs to the bacterial solute-binding protein 9 family
AM360_RS20970	COG1121	(ABC) transporter
AM360_RS20975	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM360_RS20980	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM360_RS20995	COG0679	Auxin Efflux Carrier
AM360_RS21015	COG3720	iron ion transport
AM360_RS21020	COG4558	Periplasmic binding protein
AM360_RS21025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS21065	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM360_RS21070	COG0163	prenyltransferase activity
AM360_RS21095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM360_RS21100	COG1388	LysM domain
AM360_RS21100	COG4942	peptidase
AM360_RS21160	COG2234	aminopeptidase activity
AM360_RS21180	COG0720	synthase
AM360_RS21185	COG0602	queuosine metabolic process
AM360_RS21205	COG3956	TIGRFAM MazG family protein
AM360_RS21210	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM360_RS21220	COG2205	protein histidine kinase activity
AM360_RS21220	COG3437	response regulator, receiver
AM360_RS21220	COG3850	Histidine kinase
AM360_RS21220	COG4999	Histidine kinase
AM360_RS21225	COG1929	Belongs to the glycerate kinase type-1 family
AM360_RS21230	COG4948	Mandelate Racemase Muconate Lactonizing
AM360_RS21235	COG4948	Mandelate Racemase Muconate Lactonizing
AM360_RS21240	COG2271	Major facilitator Superfamily
AM360_RS21245	COG0716	FMN binding
AM360_RS21250	COG0564	pseudouridine synthase activity
AM360_RS21255	COG3098	single-species biofilm formation
AM360_RS21270	COG1611	Belongs to the LOG family
AM360_RS21275	COG0814	amino acid
AM360_RS21280	COG1760	l-serine dehydratase
AM360_RS21285	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM360_RS21295	COG0477	Major facilitator Superfamily
AM360_RS21305	COG1464	Belongs to the NlpA lipoprotein family
AM360_RS21310	COG2011	ABC-type metal ion transport system permease component
AM360_RS21315	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AM360_RS21330	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS21345	COG1454	alcohol dehydrogenase
AM360_RS21350	COG0235	Class ii aldolase
AM360_RS21355	COG0738	Major facilitator superfamily
AM360_RS21375	COG1349	DNA-binding transcription factor activity
AM360_RS21385	COG2363	Small membrane protein
AM360_RS21390	COG0583	DNA-binding transcription factor activity
AM360_RS21400	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AM360_RS21405	COG2166	iron-sulfur cluster assembly
AM360_RS21410	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AM360_RS21415	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AM360_RS21580	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM360_RS21610	COG1012	belongs to the aldehyde dehydrogenase family
AM360_RS21610	COG1454	alcohol dehydrogenase
AM360_RS21615	COG4656	Part of a membrane complex involved in electron transport
AM360_RS21645	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AM360_RS21650	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM360_RS21655	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AM360_RS21655	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AM360_RS21665	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AM360_RS21670	COG1074	ATP-dependent DNA helicase activity
AM360_RS21675	COG1025	Belongs to the peptidase M16 family
AM360_RS21680	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AM360_RS21685	COG4967	type IV pilus modification protein PilV
AM360_RS21695	COG4795	General secretion pathway protein
AM360_RS21700	COG2165	general secretion pathway protein
AM360_RS21730	COG0861	Integral membrane protein TerC family
AM360_RS21740	COG0667	Aldo Keto reductase
AM360_RS21765	COG1609	Transcriptional regulator
AM360_RS21775	COG2186	Transcriptional regulator
AM360_RS21780	COG2723	6-phospho-beta-galactosidase activity
AM360_RS21785	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS21790	COG1609	Transcriptional regulator
AM360_RS21800	COG0583	DNA-binding transcription factor activity
AM360_RS21805	COG1794	racemase activity, acting on amino acids and derivatives
AM360_RS21810	COG1917	Cupin 2, conserved barrel domain protein
AM360_RS21815	COG1175	transmembrane transport
AM360_RS21820	COG0395	ABC-type sugar transport system, permease component
AM360_RS21825	COG3842	ATPase activity
AM360_RS21855	COG2814	Major facilitator Superfamily
AM360_RS21860	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS21865	COG0823	Involved in the tonB-independent uptake of proteins
AM360_RS21875	COG0183	Belongs to the thiolase family
AM360_RS21890	COG0814	amino acid
AM360_RS21895	COG0667	Aldo Keto reductase
AM360_RS21945	COG0697	spore germination
AM360_RS21950	COG1846	Transcriptional regulator
AM360_RS21955	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM360_RS21970	COG0582	viral genome integration into host DNA
AM360_RS21975	COG4974	Belongs to the 'phage' integrase family
AM360_RS21985	COG3539	Fimbrial protein
AM360_RS21990	COG3121	Chaperone
AM360_RS21995	COG3188	usher protein
AM360_RS22000	COG3539	Fimbrial protein
AM360_RS22005	COG3539	Fimbrial protein
AM360_RS22010	COG3539	Fimbrial protein
AM360_RS22020	COG2388	GCN5-related N-acetyl-transferase
AM360_RS22025	COG3592	Divergent 4Fe-4S mono-cluster
AM360_RS22040	COG1289	transmembrane transporter activity
AM360_RS22045	COG1538	Outer membrane efflux protein
AM360_RS22060	COG1393	Belongs to the ArsC family
AM360_RS22065	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM360_RS22100	COG0667	Aldo Keto reductase
AM360_RS22115	COG2814	Major facilitator Superfamily
AM360_RS22125	COG4942	peptidase
AM360_RS22150	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AM360_RS22160	COG4974	Belongs to the 'phage' integrase family
AM360_RS22165	COG0716	FMN binding
AM360_RS22175	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AM360_RS22185	COG1272	protein, Hemolysin III
AM360_RS22195	COG1737	Transcriptional regulator
AM360_RS22200	COG2723	6-phospho-beta-galactosidase activity
AM360_RS22220	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM360_RS22225	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS22245	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM360_RS22250	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM360_RS22255	COG0006	proline dipeptidase activity
AM360_RS22275	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AM360_RS22280	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM360_RS22295	COG2968	Membrane
AM360_RS22305	COG0668	transmembrane transport
AM360_RS22310	COG0191	fructose-bisphosphate aldolase activity
AM360_RS22325	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM360_RS22330	COG0501	Belongs to the peptidase M48B family
AM360_RS22350	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
AM360_RS22355	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS22385	COG1414	Transcriptional regulator
AM360_RS22390	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS22405	COG2146	nitrite reductase [NAD(P)H] activity
AM360_RS22450	COG2814	Major facilitator Superfamily
AM360_RS22460	COG2356	endonuclease I
AM360_RS22465	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AM360_RS22470	COG0189	ligase activity
AM360_RS22490	COG2805	Type II/IV secretion system protein
AM360_RS22495	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AM360_RS22500	COG0762	integral membrane protein
AM360_RS22515	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM360_RS22525	COG3171	Protein conserved in bacteria
AM360_RS22535	COG1194	a g-specific adenine glycosylase
AM360_RS22550	COG2211	Major facilitator Superfamily
AM360_RS22555	COG1982	Orn Lys Arg decarboxylase major
AM360_RS22565	COG1811	Na channel or pump
AM360_RS22575	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM360_RS22635	COG3423	Transcriptional regulator
AM360_RS22640	COG1278	Cold shock
AM360_RS22650	COG3423	Transcriptional regulator
AM360_RS22910	COG0626	cystathionine gamma-synthase activity
AM360_RS22915	COG0583	DNA-binding transcription factor activity
AM360_RS22935	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM360_RS22940	COG0754	glutathionylspermidine amidase activity
AM360_RS22950	COG0625	glutathione transferase activity
AM360_RS22975	COG2211	Major facilitator Superfamily
AM360_RS22980	COG0848	biopolymer transport protein
AM360_RS22995	COG0626	cystathionine gamma-synthase activity
AM360_RS23000	COG0586	Pfam SNARE associated Golgi protein
AM360_RS23005	COG2207	Transcriptional regulator
AM360_RS23010	COG1979	alcohol dehydrogenase
AM360_RS23015	COG0656	L-ascorbic acid biosynthetic process
AM360_RS23025	COG1032	radical SAM domain protein
AM360_RS23030	COG2132	Multicopper oxidase
AM360_RS23035	COG0204	Acyl-transferase
AM360_RS23040	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM360_RS23045	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM360_RS23050	COG3111	PFAM Bacterial OB fold (BOF) protein
AM360_RS23060	COG0642	Histidine kinase
AM360_RS23065	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM360_RS23070	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AM360_RS23080	COG3150	esterase
AM360_RS23085	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM360_RS23090	COG3151	Protein conserved in bacteria
AM360_RS23095	COG0494	nUDIX hydrolase
AM360_RS23110	COG0754	glutathionylspermidine amidase activity
AM360_RS23115	COG3384	dioxygenase
AM360_RS23130	COG2960	long-chain fatty acid transporting porin activity
AM360_RS23150	COG3025	triphosphatase activity
AM360_RS23155	COG4991	sh3 domain protein
AM360_RS23170	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM360_RS23235	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AM360_RS23240	COG0358	DNA primase activity
AM360_RS23245	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM360_RS23270	COG2197	response regulator
AM360_RS23275	COG2198	Histidine kinase
AM360_RS23275	COG2205	protein histidine kinase activity
AM360_RS23275	COG0784	Response regulator, receiver
AM360_RS23275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM360_RS23285	COG3247	response to pH
AM360_RS23365	COG2376	Dihydroxyacetone kinase
AM360_RS23370	COG1461	Dihydroxyacetone kinase
AM360_RS23385	COG2375	cellular response to nickel ion
AM360_RS23390	COG1695	Transcriptional regulator
AM360_RS23445	COG0446	pyridine nucleotide-disulphide oxidoreductase
AM360_RS23445	COG1902	pentaerythritol trinitrate reductase activity
AM360_RS23465	COG1451	nucleotide metabolic process
AM360_RS23470	COG0673	inositol 2-dehydrogenase activity
AM360_RS23475	COG0861	Integral membrane protein TerC family
AM360_RS23490	COG2721	sulfolactate sulfo-lyase activity
AM360_RS23500	COG2271	Major facilitator Superfamily
AM360_RS23505	COG2186	Transcriptional regulator
AM360_RS23510	COG0586	Pfam SNARE associated Golgi protein
AM360_RS23520	COG1422	Protein of unknown function (DUF1090)
AM360_RS23525	COG4575	ribosome binding
AM360_RS23530	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AM360_RS23540	COG2259	Doxx family
AM360_RS23545	COG0435	Glutathione S-transferase
AM360_RS23550	COG3152	Membrane
AM360_RS23555	COG0583	DNA-binding transcription factor activity
AM360_RS23560	COG1741	Belongs to the pirin family
AM360_RS23580	COG1929	Belongs to the glycerate kinase type-1 family
AM360_RS23585	COG2084	Dehydrogenase
AM360_RS23595	COG2271	Major facilitator Superfamily
AM360_RS23600	COG2721	sulfolactate sulfo-lyase activity
AM360_RS23605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS23610	COG1349	DNA-binding transcription factor activity
AM360_RS23620	COG1105	Belongs to the carbohydrate kinase PfkB family
AM360_RS23625	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS23625	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM360_RS23625	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS23630	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS23630	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS23640	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS23645	COG3414	Phosphotransferase system galactitol-specific IIB component
AM360_RS23650	COG3775	system Galactitol-specific IIC component
AM360_RS23655	COG1063	alcohol dehydrogenase
AM360_RS23670	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AM360_RS23690	COG2823	Periplasmic or secreted lipoprotein
AM360_RS23695	COG0701	Predicted permease
AM360_RS23700	COG0702	epimerase
AM360_RS23705	COG0693	protein deglycase activity
AM360_RS23720	COG3153	acetyltransferase
AM360_RS23725	COG3154	lipid carrier protein
AM360_RS23730	COG0826	peptidase U32
AM360_RS23735	COG0826	peptidase U32
AM360_RS23740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM360_RS23745	COG0814	amino acid
AM360_RS23795	COG0195	Participates in both transcription termination and antitermination
AM360_RS23835	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM360_RS23845	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AM360_RS23850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM360_RS23865	COG1534	Rna-binding protein
AM360_RS23875	COG2027	D-alanyl-D-alanine carboxypeptidase
AM360_RS23885	COG0697	spore germination
AM360_RS23900	COG0142	geranyltranstransferase activity
AM360_RS23905	COG3423	Transcriptional regulator
AM360_RS23915	COG5007	Belongs to the BolA IbaG family
AM360_RS23920	COG3113	response to antibiotic
AM360_RS23925	COG2854	intermembrane phospholipid transfer
AM360_RS23930	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM360_RS23935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AM360_RS23940	COG1127	ABC transporter
AM360_RS23950	COG0530	calcium, potassium:sodium antiporter activity
AM360_RS23960	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AM360_RS23965	COG3117	lipopolysaccharide transmembrane transporter activity
AM360_RS23970	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AM360_RS23975	COG1137	ATPase activity
AM360_RS23980	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AM360_RS23985	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM360_RS23990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS24000	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM360_RS24005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM360_RS24010	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AM360_RS24015	COG2198	Histidine kinase
AM360_RS24015	COG0784	Response regulator, receiver
AM360_RS24015	COG5002	protein histidine kinase activity
AM360_RS24020	COG1312	Catalyzes the dehydration of D-mannonate
AM360_RS24025	COG1063	alcohol dehydrogenase
AM360_RS24030	COG2271	Major facilitator Superfamily
AM360_RS24035	COG1242	4 iron, 4 sulfur cluster binding
AM360_RS24045	COG0070	glutamate synthase
AM360_RS24045	COG0069	glutamate synthase activity
AM360_RS24045	COG0067	glutamate synthase
AM360_RS24050	COG0493	'glutamate synthase
AM360_RS24060	COG2969	positive regulation of protein catabolic process
AM360_RS24065	COG0625	glutathione transferase activity
AM360_RS24085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM360_RS24090	COG3105	Protein conserved in bacteria
AM360_RS24095	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM360_RS24100	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM360_RS24125	COG2732	(Barnase) inhibitor
AM360_RS24130	COG1289	transmembrane transporter activity
AM360_RS24145	COG0583	DNA-binding transcription factor activity
AM360_RS24150	COG0312	modulator of DNA gyrase
AM360_RS24155	COG3164	Protein of unknown function
AM360_RS24160	COG1530	ribonuclease E activity
AM360_RS24170	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AM360_RS24175	COG1792	Involved in formation and maintenance of cell shape
AM360_RS24180	COG1077	Cell shape determining protein MreB Mrl
AM360_RS24190	COG2200	EAL domain
AM360_RS24190	COG2199	diguanylate cyclase activity
AM360_RS24220	COG0511	ligase activity, forming carbon-carbon bonds
AM360_RS24225	COG0439	Biotin carboxylase
AM360_RS24230	COG3924	membrane
AM360_RS24235	COG4145	pantothenate transmembrane transporter activity
AM360_RS24265	COG1802	Transcriptional regulator
AM360_RS24265	COG4626	Terminase
AM360_RS24355	COG3561	AntA/AntB antirepressor
AM360_RS24370	COG0582	viral genome integration into host DNA
AM360_RS24375	COG1309	transcriptional regulator
AM360_RS24380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS24385	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM360_RS24420	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM360_RS24440	COG0551	DNA topoisomerase type I activity
AM360_RS24450	COG0758	DNA mediated transformation
AM360_RS24480	COG3036	rescue of stalled ribosome
AM360_RS24485	COG0789	Transcriptional regulator
AM360_RS24500	COG0202	RNA polymerase activity
AM360_RS24525	COG0201	protein transport
AM360_RS24590	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AM360_RS24605	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AM360_RS24630	COG0051	transcription antitermination factor activity, RNA binding
AM360_RS24690	COG2964	Protein conserved in bacteria
AM360_RS24695	COG0545	Peptidyl-prolyl cis-trans isomerase
AM360_RS24705	COG1047	Peptidyl-prolyl cis-trans
AM360_RS24710	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AM360_RS24725	COG0488	(ABC) transporter
AM360_RS24735	COG0429	hydrolase of the alpha beta-hydrolase fold
AM360_RS24745	COG3954	Phosphoribulokinase
AM360_RS24750	COG1765	OsmC-like protein
AM360_RS24765	COG1289	transmembrane transporter activity
AM360_RS24770	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM360_RS24795	COG0738	Major facilitator superfamily
AM360_RS24800	COG0402	S-adenosylhomocysteine deaminase activity
AM360_RS24805	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM360_RS24830	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM360_RS24835	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM360_RS24840	COG3266	domain, Protein
AM360_RS24860	COG4796	Type ii and iii secretion system protein
AM360_RS24885	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AM360_RS24890	COG0494	nUDIX hydrolase
AM360_RS24900	COG1011	Hydrolase
AM360_RS24905	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AM360_RS24930	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM360_RS24935	COG2183	response to ionizing radiation
AM360_RS24940	COG1918	ferrous iron import across plasma membrane
AM360_RS24965	COG1040	competence protein
AM360_RS24975	COG2610	gluconate transmembrane transporter activity
AM360_RS24980	COG1640	4-alpha-glucanotransferase
AM360_RS24985	COG0058	SHG alpha-glucan phosphorylase activity
AM360_RS25000	COG1349	DNA-binding transcription factor activity
AM360_RS25015	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM360_RS25030	COG0058	SHG alpha-glucan phosphorylase activity
AM360_RS25055	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM360_RS25065	COG2610	gluconate transmembrane transporter activity
AM360_RS25070	COG3265	gluconokinase activity
AM360_RS25075	COG1609	Transcriptional regulator
AM360_RS25080	COG1741	Belongs to the pirin family
AM360_RS25085	COG0673	inositol 2-dehydrogenase activity
AM360_RS25100	COG1247	-acetyltransferase
AM360_RS25105	COG0405	Gamma-glutamyltransferase
AM360_RS25115	COG0584	glycerophosphoryl diester phosphodiesterase
AM360_RS25165	COG0559	Belongs to the binding-protein-dependent transport system permease family
AM360_RS25170	COG0683	leucine binding
AM360_RS25180	COG0683	leucine binding
AM360_RS25190	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM360_RS25205	COG2177	Part of the ABC transporter FtsEX involved in
AM360_RS25210	COG2884	Cell division ATP-binding protein ftsE
AM360_RS25215	COG0552	protein localization to endoplasmic reticulum
AM360_RS25220	COG0742	ribosomal rna small subunit methyltransferase
AM360_RS25225	COG3776	membrane
AM360_RS25235	COG3714	YhhN family
AM360_RS25250	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AM360_RS25260	COG0477	Major facilitator Superfamily
AM360_RS25265	COG0628	permease
AM360_RS25305	COG3479	Phenolic acid decarboxylase
AM360_RS25315	COG0747	negative chemotaxis
AM360_RS25320	COG0601	transmembrane transport
AM360_RS25325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS25335	COG1124	(ABC) transporter
AM360_RS25345	COG2239	Acts as a magnesium transporter
AM360_RS25350	COG2081	HI0933 family
AM360_RS25355	COG0306	phosphate transporter
AM360_RS25365	COG0589	response to stress
AM360_RS25385	COG0671	phosphoesterase, PA-phosphatase related
AM360_RS25390	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AM360_RS25395	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM360_RS25405	COG1454	alcohol dehydrogenase
AM360_RS25415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM360_RS25420	COG1028	Short-chain dehydrogenase reductase Sdr
AM360_RS25425	COG0583	DNA-binding transcription factor activity
AM360_RS25430	COG1295	ribonuclease BN
AM360_RS25435	COG0477	Major facilitator Superfamily
AM360_RS25440	COG2982	Protein involved in outer membrane biogenesis
AM360_RS25455	COG0612	Peptidase, M16
AM360_RS25465	COG2199	diguanylate cyclase activity
AM360_RS25465	COG2200	EAL domain
AM360_RS25470	COG0457	Tetratricopeptide repeat
AM360_RS25470	COG3118	belongs to the thioredoxin family
AM360_RS25475	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AM360_RS25480	COG1215	transferase activity, transferring glycosyl groups
AM360_RS25510	COG2194	sulfuric ester hydrolase activity
AM360_RS25525	COG0457	Tetratricopeptide repeat
AM360_RS25530	COG1215	transferase activity, transferring glycosyl groups
AM360_RS25555	COG4608	Belongs to the ABC transporter superfamily
AM360_RS25560	COG0444	Belongs to the ABC transporter superfamily
AM360_RS25565	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS25570	COG0601	transmembrane transport
AM360_RS25575	COG0747	negative chemotaxis
AM360_RS25610	COG2223	nitrite transmembrane transporter activity
AM360_RS25615	COG5571	outer membrane autotransporter
AM360_RS25620	COG2818	Glycosylase
AM360_RS25625	COG0456	acetyltransferase
AM360_RS25630	COG0243	molybdopterin cofactor binding
AM360_RS25635	COG2885	chlorophyll binding
AM360_RS25640	COG1609	Transcriptional regulator
AM360_RS25650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS25670	COG2814	Major facilitator Superfamily
AM360_RS25675	COG2944	sequence-specific DNA binding
AM360_RS25680	COG1278	Cold shock
AM360_RS25715	COG3274	enterobacterial common antigen metabolic process
AM360_RS25720	COG4682	membrane
AM360_RS25725	COG4682	membrane
AM360_RS25745	COG4213	ABC transporter substrate-binding protein
AM360_RS25755	COG4214	carbohydrate transport
AM360_RS25760	COG2207	Transcriptional regulator
AM360_RS25760	COG1609	Transcriptional regulator
AM360_RS25765	COG2992	FlgJ-related protein
AM360_RS25775	COG0366	Alpha amylase catalytic
AM360_RS25780	COG3977	Valine--pyruvate aminotransferase
AM360_RS25785	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM360_RS25790	COG1414	Transcriptional regulator
AM360_RS25795	COG3276	selenocysteine insertion sequence binding
AM360_RS25805	COG0625	glutathione transferase activity
AM360_RS25810	COG1566	PFAM secretion protein HlyD family protein
AM360_RS25830	COG3722	fumarate hydratase activity
AM360_RS25850	COG2186	Transcriptional regulator
AM360_RS25860	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AM360_RS25880	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM360_RS25885	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM360_RS25895	COG4942	peptidase
AM360_RS25900	COG2861	carbohydrate metabolic process
AM360_RS25905	COG0463	Glycosyl transferase, family 2
AM360_RS25915	COG0156	8-amino-7-oxononanoate synthase activity
AM360_RS25930	COG0859	PFAM glycosyl transferase family 9
AM360_RS25955	COG0859	PFAM glycosyl transferase family 9
AM360_RS25965	COG0438	transferase activity, transferring glycosyl groups
AM360_RS25970	COG1216	Glycosyl transferase, family 2
AM360_RS25975	COG1519	Transferase
AM360_RS26010	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AM360_RS26035	COG0842	Transport permease protein
AM360_RS26040	COG1131	(ABC) transporter
AM360_RS26060	COG1561	YicC-like family, N-terminal region
AM360_RS26065	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AM360_RS26070	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM360_RS26070	COG2169	Transcriptional regulator
AM360_RS26080	COG2860	membrane
AM360_RS26100	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM360_RS26105	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM360_RS26110	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AM360_RS26115	COG1494	fructose-1,6-bisphosphatase
AM360_RS26125	COG3152	Membrane
AM360_RS26150	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AM360_RS26170	COG0786	glutamate:sodium symporter activity
AM360_RS26175	COG2233	PERMEase
AM360_RS26180	COG2982	Protein involved in outer membrane biogenesis
AM360_RS26185	COG1263	PTS System
AM360_RS26185	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS26190	COG1486	melibiose metabolic process
AM360_RS26200	COG1501	Belongs to the glycosyl hydrolase 31 family
AM360_RS26205	COG2211	Major facilitator Superfamily
AM360_RS26240	COG1064	alcohol dehydrogenase
AM360_RS26250	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AM360_RS26265	COG1464	Belongs to the NlpA lipoprotein family
AM360_RS26290	COG0583	DNA-binding transcription factor activity
AM360_RS26325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM360_RS26335	COG2814	Major facilitator Superfamily
AM360_RS26345	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM360_RS26345	COG1263	PTS System
AM360_RS26350	COG0697	spore germination
AM360_RS26365	COG2828	Protein conserved in bacteria
AM360_RS26370	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AM360_RS26375	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AM360_RS26380	COG0583	DNA-binding transcription factor activity
AM360_RS26385	COG3384	dioxygenase
AM360_RS26395	COG1609	Transcriptional regulator
AM360_RS26405	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS26405	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM360_RS26410	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM360_RS26415	COG4580	involved in the transport of maltose and maltodextrins
AM360_RS26440	COG2188	Transcriptional regulator
AM360_RS26485	COG2271	Major facilitator Superfamily
AM360_RS26495	COG2197	response regulator
AM360_RS26500	COG0440	acetolactate synthase activity
AM360_RS26505	COG0028	Belongs to the TPP enzyme family
AM360_RS26530	COG2814	Major facilitator Superfamily
AM360_RS26535	COG0583	DNA-binding transcription factor activity
AM360_RS26540	COG2610	gluconate transmembrane transporter activity
AM360_RS26560	COG2149	membrane
AM360_RS26575	COG2188	Transcriptional regulator
AM360_RS26585	COG3645	SOS response
AM360_RS26600	COG5645	(Lipo)protein
AM360_RS26605	COG0823	Involved in the tonB-independent uptake of proteins
AM360_RS26610	COG2271	Major facilitator Superfamily
AM360_RS26620	COG0800	Aldolase
AM360_RS26625	COG3734	2-keto-3-deoxy-galactonokinase
AM360_RS26630	COG2186	Transcriptional regulator
AM360_RS26645	COG0561	phosphatase activity
AM360_RS26650	COG0187	DNA topoisomerase II activity
AM360_RS26685	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AM360_RS26715	COG2091	lysine biosynthetic process via aminoadipic acid
AM360_RS26720	COG0431	NADPH-dependent FMN reductase
AM360_RS26725	COG2252	PERMEase
AM360_RS26735	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM360_RS26740	COG0363	glucosamine-6-phosphate deaminase activity
AM360_RS26745	COG2382	esterase
AM360_RS26760	COG0704	Plays a role in the regulation of phosphate uptake
AM360_RS26765	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AM360_RS26770	COG0581	inorganic phosphate transmembrane transporter activity
AM360_RS26775	COG0573	inorganic phosphate transmembrane transporter activity
AM360_RS26780	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM360_RS26785	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM360_RS26835	COG3312	ion transport
AM360_RS26850	COG0716	FMN binding
AM360_RS26855	COG1522	sequence-specific DNA binding
AM360_RS26885	COG1129	ABC transporter
AM360_RS26890	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS26900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM360_RS26905	COG1609	Transcriptional regulator
AM360_RS26910	COG0477	Major facilitator Superfamily
AM360_RS26915	COG2186	Transcriptional regulator
AM360_RS26945	COG1763	Mo-molybdopterin cofactor biosynthetic process
AM360_RS26955	COG3084	Protein conserved in bacteria
AM360_RS26960	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AM360_RS26970	COG0204	Acyl-transferase
AM360_RS26995	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM360_RS27010	COG3852	Histidine kinase
AM360_RS27030	COG1011	Hydrolase
AM360_RS27045	COG0456	acetyltransferase
AM360_RS27050	COG0657	acetylesterase activity
AM360_RS27055	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM360_RS27070	COG2864	formate dehydrogenase
AM360_RS27075	COG0437	4 iron, 4 sulfur cluster binding
AM360_RS27100	COG0205	6-phosphofructokinase activity
AM360_RS27160	COG2211	Major facilitator Superfamily
AM360_RS27170	COG1454	alcohol dehydrogenase
AM360_RS27175	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS27180	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM360_RS27185	COG1129	ABC transporter
AM360_RS27220	COG3436	PFAM IS66 Orf2 family protein
AM360_RS27245	COG1609	Transcriptional regulator
AM360_RS27255	COG2223	nitrite transmembrane transporter activity
AM360_RS27565	COG5499	transcription regulator containing HTH domain
AM360_RS27650	COG1475	DNA binding
AM360_RS27730	COG3344	reverse transcriptase
AM360_RS27795	COG2199	diguanylate cyclase activity
AM360_RS27795	COG2203	Gaf domain
AM360_RS27800	COG5001	Diguanylate cyclase
AM360_RS27800	COG1716	ATPase activity
AM360_RS27815	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM360_RS27825	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM360_RS27875	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM360_RS27905	COG0739	heme binding
AM360_RS27915	COG2132	Multicopper oxidase
AM360_RS27920	COG3667	copper resistance
AM360_RS27925	COG2372	response to copper ion
AM360_RS27930	COG1276	copper resistance
AM360_RS27935	COG0745	RESPONSE REGULATOR receiver
AM360_RS27940	COG2205	protein histidine kinase activity
AM360_RS27960	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AM360_RS27975	COG0431	NADPH-dependent FMN reductase
AM360_RS28005	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM360_RS28070	COG2801	Transposase and inactivated derivatives
AM360_RS28080	COG0501	Belongs to the peptidase M48B family
AM360_RS28100	COG0542	response to heat
AM360_RS28105	COG0071	Belongs to the small heat shock protein (HSP20) family
AM360_RS28215	COG3173	Aminoglycoside phosphotransferase
AM360_RS28245	COG1695	Transcriptional regulator
AM360_RS28350	COG3409	Peptidoglycan-binding domain 1 protein
AM360_RS28350	COG3429	Glucose-6-phosphate dehydrogenase subunit
AM360_RS28360	COG3436	PFAM IS66 Orf2 family protein
AM360_RS28370	COG4372	Transposase
AM360_RS28375	COG4172	Belongs to the ABC transporter superfamily
AM360_RS28390	COG0601	transmembrane transport
AM360_RS28395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM360_RS28420	COG1595	DNA-templated transcription, initiation
AM360_RS28425	COG3712	iron ion homeostasis
AM360_RS28430	COG4772	TonB-dependent receptor
AM360_RS28435	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AM360_RS28440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS28445	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM360_RS28450	COG1120	ATPase activity
AM360_RS28835	COG4372	Transposase
AM360_RS28875	COG4644	lycopene metabolic process
AM360_RS29005	COG1192	Involved in chromosome partitioning
AM360_RS29165	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
AM360_RS29190	COG3451	type IV secretory pathway VirB4
AM360_RS29325	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AM360_RS29345	COG0330	HflC and HflK could
AM360_RS29550	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM360_RS29625	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM360_RS29645	COG3271	cysteine-type peptidase activity
AM360_RS29645	COG2274	protein secretion by the type I secretion system
AM360_RS29780	COG3344	reverse transcriptase
AM360_RS29875	COG3328	transposase activity
AM360_RS29895	COG4221	oxidoreductase activity
AM360_RS29925	COG2746	aminoglycoside 3-N-acetyltransferase activity
AM360_RS30040	COG4973	Belongs to the 'phage' integrase family. XerC subfamily