locus-tag class description AM393_RS00020 PF03781 Sulfatase-modifying factor enzyme 1 AM393_RS00070 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM393_RS00070 PF04717 Type VI secretion system, phage-baseplate injector AM393_RS00070 PF13296 Putative type VI secretion system Rhs element Vgr AM393_RS00075 PF13488 Glycine zipper AM393_RS00075 PF00691 OmpA family AM393_RS00105 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM393_RS00110 PF00849 RNA pseudouridylate synthase AM393_RS00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS00120 PF03466 LysR substrate binding domain AM393_RS00130 PF07690 Major Facilitator Superfamily AM393_RS00135 PF03466 LysR substrate binding domain AM393_RS00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS00145 PF01293 Phosphoenolpyruvate carboxykinase AM393_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS00150 PF03466 LysR substrate binding domain AM393_RS00155 PF00005 ABC transporter AM393_RS00160 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM393_RS00160 PF00005 ABC transporter AM393_RS00165 PF02653 Branched-chain amino acid transport system / permease component AM393_RS00165 PF11862 Domain of unknown function (DUF3382) AM393_RS00170 PF02653 Branched-chain amino acid transport system / permease component AM393_RS00175 PF13458 Periplasmic binding protein AM393_RS00180 PF01228 Glycine radical AM393_RS00180 PF02901 Pyruvate formate lyase-like AM393_RS00185 PF00871 Acetokinase family AM393_RS00190 PF03222 Tryptophan/tyrosine permease family AM393_RS00195 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS00200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS00200 PF03466 LysR substrate binding domain AM393_RS00240 PF14403 Circularly permuted ATP-grasp type 2 AM393_RS00255 PF01204 Trehalase AM393_RS00260 PF00593 TonB dependent receptor AM393_RS00260 PF07715 TonB-dependent Receptor Plug Domain AM393_RS00265 PF01464 Transglycosylase SLT domain AM393_RS00270 PF17676 LD-carboxypeptidase C-terminal domain AM393_RS00270 PF02016 LD-carboxypeptidase N-terminal domain AM393_RS00275 PF00999 Sodium/hydrogen exchanger family AM393_RS00275 PF02080 TrkA-C domain AM393_RS00275 PF03471 Transporter associated domain AM393_RS00280 PF01168 Alanine racemase, N-terminal domain AM393_RS00280 PF00842 Alanine racemase, C-terminal domain AM393_RS00285 PF01266 FAD dependent oxidoreductase AM393_RS00290 PF04293 SpoVR like protein AM393_RS00295 PF07840 FadR C-terminal domain AM393_RS00295 PF00392 Bacterial regulatory proteins, gntR family AM393_RS00300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM393_RS00305 PF02600 Disulfide bond formation protein DsbB AM393_RS00315 PF03692 Putative zinc- or iron-chelating domain AM393_RS00320 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM393_RS00325 PF05166 YcgL domain AM393_RS00330 PF03775 Septum formation inhibitor MinC, C-terminal domain AM393_RS00330 PF05209 Septum formation inhibitor MinC, N-terminal domain AM393_RS00335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM393_RS00340 PF03776 Septum formation topological specificity factor MinE AM393_RS00345 PF00570 HRDC domain AM393_RS00345 PF01612 3'-5' exonuclease AM393_RS00350 PF13193 AMP-binding enzyme C-terminal domain AM393_RS00350 PF00501 AMP-binding enzyme AM393_RS00355 PF03843 Outer membrane lipoprotein Slp family AM393_RS00360 PF00814 Glycoprotease family AM393_RS00365 PF13307 Helicase C-terminal domain AM393_RS00365 PF04851 Type III restriction enzyme, res subunit AM393_RS00370 PF01042 Endoribonuclease L-PSP AM393_RS00375 PF03701 Uncharacterised protein family (UPF0181) AM393_RS00380 PF04715 Anthranilate synthase component I, N terminal region AM393_RS00380 PF00425 chorismate binding enzyme AM393_RS00385 PF00293 NUDIX domain AM393_RS00390 PF03313 Serine dehydratase alpha chain AM393_RS00390 PF03315 Serine dehydratase beta chain AM393_RS00395 PF00563 EAL domain AM393_RS00395 PF12792 CSS motif domain associated with EAL AM393_RS00400 PF03741 Integral membrane protein TerC family AM393_RS00400 PF03471 Transporter associated domain AM393_RS00405 PF03610 PTS system fructose IIA component AM393_RS00405 PF03830 PTS system sorbose subfamily IIB component AM393_RS00410 PF03609 PTS system sorbose-specific iic component AM393_RS00415 PF03613 PTS system mannose/fructose/sorbose family IID component AM393_RS00420 PF06173 Protein of unknown function (DUF986) AM393_RS00430 PF02659 Putative manganese efflux pump AM393_RS00435 PF13847 Methyltransferase domain AM393_RS00440 PF03717 Penicillin-binding Protein dimerisation domain AM393_RS00440 PF00905 Penicillin binding protein transpeptidase domain AM393_RS00445 PF00313 'Cold-shock' DNA-binding domain AM393_RS00450 PF10736 Protein of unknown function (DUF2627) AM393_RS00465 PF13974 YebO-like protein AM393_RS00470 PF13998 MgrB protein AM393_RS00475 PF13996 YobH-like protein AM393_RS00480 PF09339 IclR helix-turn-helix domain AM393_RS00480 PF01614 Bacterial transcriptional regulator AM393_RS00485 PF07690 Major Facilitator Superfamily AM393_RS00490 PF01435 Peptidase family M48 AM393_RS00495 PF17804 Tail specific protease N-terminal domain AM393_RS00495 PF00595 PDZ domain AM393_RS00495 PF03572 Peptidase family S41 AM393_RS00495 PF11818 C-terminal domain of tail specific protease (DUF3340) AM393_RS00500 PF04352 ProQ/FINO family AM393_RS00500 PF17516 ProQ C-terminal domain AM393_RS00505 PF13185 GAF domain AM393_RS00510 PF04403 Paraquat-inducible protein A AM393_RS00515 PF02470 MlaD protein AM393_RS00520 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM393_RS00520 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM393_RS00520 PF01189 16S rRNA methyltransferase RsmB/F AM393_RS00525 PF07351 Protein of unknown function (DUF1480) AM393_RS00530 PF07358 Protein of unknown function (DUF1482) AM393_RS00535 PF00149 Calcineurin-like phosphoesterase AM393_RS00540 PF04393 Protein of unknown function (DUF535) AM393_RS00570 PF03245 Bacteriophage Rz lysis protein AM393_RS00580 PF10709 Protein of unknown function (DUF2511) AM393_RS00585 PF05425 Copper resistance protein D AM393_RS00590 PF04234 CopC domain AM393_RS00595 PF06440 DNA polymerase III, theta subunit AM393_RS00600 PF00929 Exonuclease AM393_RS00605 PF00326 Prolyl oligopeptidase family AM393_RS00605 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM393_RS00610 PF04391 Protein of unknown function (DUF533) AM393_RS00615 PF07130 YebG protein AM393_RS00620 PF02222 ATP-grasp domain AM393_RS00625 PF01081 KDPG and KHG aldolase AM393_RS00630 PF00920 Dehydratase family AM393_RS00635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM393_RS00635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM393_RS00650 PF01380 SIS domain AM393_RS00650 PF01418 Helix-turn-helix domain, rpiR family AM393_RS00655 PF00224 Pyruvate kinase, barrel domain AM393_RS00655 PF02887 Pyruvate kinase, alpha/beta domain AM393_RS00660 PF03279 Bacterial lipid A biosynthesis acyltransferase AM393_RS00665 PF01476 LysM domain AM393_RS00665 PF08525 Opacity-associated protein A N-terminal motif AM393_RS00665 PF01551 Peptidase family M23 AM393_RS00670 PF01297 Zinc-uptake complex component A periplasmic AM393_RS00675 PF00005 ABC transporter AM393_RS00680 PF00950 ABC 3 transport family AM393_RS00685 PF05491 RuvB C-terminal winged helix domain AM393_RS00685 PF17864 RuvB AAA lid domain AM393_RS00685 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM393_RS00690 PF07499 RuvA, C-terminal domain AM393_RS00690 PF01330 RuvA N terminal domain AM393_RS00695 PF02075 Crossover junction endodeoxyribonuclease RuvC AM393_RS00700 PF01709 Transcriptional regulator AM393_RS00705 PF00293 NUDIX domain AM393_RS00710 PF01336 OB-fold nucleic acid binding domain AM393_RS00710 PF02938 GAD domain AM393_RS00710 PF00152 tRNA synthetases class II (D, K and N) AM393_RS00715 PF00857 Isochorismatase family AM393_RS00720 PF01904 Protein of unknown function DUF72 AM393_RS00725 PF01124 MAPEG family AM393_RS00730 PF13649 Methyltransferase domain AM393_RS00735 PF08003 Protein of unknown function (DUF1698) AM393_RS00740 PF03932 CutC family AM393_RS00745 PF06185 YecM protein AM393_RS00750 PF03485 Arginyl tRNA synthetase N terminal domain AM393_RS00750 PF00750 tRNA synthetases class I (R) AM393_RS00750 PF05746 DALR anticodon binding domain AM393_RS00755 PF07470 Glycosyl Hydrolase Family 88 AM393_RS00765 PF00582 Universal stress protein family AM393_RS00770 PF00982 Glycosyltransferase family 20 AM393_RS00775 PF02358 Trehalose-phosphatase AM393_RS00780 PF02653 Branched-chain amino acid transport system / permease component AM393_RS00785 PF00005 ABC transporter AM393_RS00790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM393_RS00800 PF00210 Ferritin-like domain AM393_RS00815 PF10964 Protein of unknown function (DUF2766) AM393_RS00820 PF07690 Major Facilitator Superfamily AM393_RS00835 PF00210 Ferritin-like domain AM393_RS00840 PF10678 Protein of unknown function (DUF2492) AM393_RS00845 PF03222 Tryptophan/tyrosine permease family AM393_RS00850 PF03695 Uncharacterised protein family (UPF0149) AM393_RS00850 PF02810 SEC-C motif AM393_RS00855 PF00701 Dihydrodipicolinate synthetase family AM393_RS00875 PF01066 CDP-alcohol phosphatidyltransferase AM393_RS00880 PF08459 UvrC Helix-hairpin-helix N-terminal AM393_RS00880 PF01541 GIY-YIG catalytic domain AM393_RS00880 PF02151 UvrB/uvrC motif AM393_RS00885 PF00196 Bacterial regulatory proteins, luxR family AM393_RS00885 PF00072 Response regulator receiver domain AM393_RS00890 PF10769 Protein of unknown function (DUF2594) AM393_RS00895 PF00196 Bacterial regulatory proteins, luxR family AM393_RS00895 PF03472 Autoinducer binding domain AM393_RS00900 PF00005 ABC transporter AM393_RS00905 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS00910 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS00915 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS00920 PF02806 Alpha amylase, C-terminal all-beta domain AM393_RS00920 PF00128 Alpha amylase, catalytic domain AM393_RS00925 PF13987 YedD-like protein AM393_RS00930 PF00196 Bacterial regulatory proteins, luxR family AM393_RS00935 PF10781 Dextransucrase DSRB AM393_RS00940 PF10733 Protein of unknown function (DUF2525) AM393_RS00945 PF17151 Periplasmic sensor domain AM393_RS00945 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS00950 PF05661 Protein of unknown function (DUF808) AM393_RS00955 PF00892 EamA-like transporter family AM393_RS00960 PF03852 DNA mismatch endonuclease Vsr AM393_RS00965 PF18284 DNA methylase N-terminal domain AM393_RS00965 PF00145 C-5 cytosine-specific DNA methylase AM393_RS00970 PF01966 HD domain AM393_RS00980 PF00267 Gram-negative porin AM393_RS00990 PF06167 Glucose-regulated metallo-peptidase M90 AM393_RS01010 PF17969 L,D-transpeptidase C-terminal domain AM393_RS01010 PF03734 L,D-transpeptidase catalytic domain AM393_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS01015 PF03466 LysR substrate binding domain AM393_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS01020 PF03466 LysR substrate binding domain AM393_RS01030 PF00589 Phage integrase family AM393_RS01030 PF13356 Arm DNA-binding domain AM393_RS01045 PF00005 ABC transporter AM393_RS01050 PF00950 ABC 3 transport family AM393_RS01055 PF01297 Zinc-uptake complex component A periplasmic AM393_RS01070 PF01266 FAD dependent oxidoreductase AM393_RS01070 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS01080 PF00490 Delta-aminolevulinic acid dehydratase AM393_RS01085 PF01979 Amidohydrolase family AM393_RS01095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM393_RS01095 PF02824 TGS domain AM393_RS01095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM393_RS01095 PF03129 Anticodon binding domain AM393_RS01100 PF01297 Zinc-uptake complex component A periplasmic AM393_RS01105 PF00950 ABC 3 transport family AM393_RS01110 PF00950 ABC 3 transport family AM393_RS01125 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS01130 PF02649 Type I GTP cyclohydrolase folE2 AM393_RS01135 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM393_RS01140 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM393_RS01140 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM393_RS01150 PF09190 DALR domain AM393_RS01150 PF01406 tRNA synthetases class I (C) catalytic domain AM393_RS01170 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM393_RS01170 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM393_RS01180 PF01475 Ferric uptake regulator family AM393_RS01185 PF01032 FecCD transport family AM393_RS01205 PF05717 IS66 Orf2 like protein AM393_RS01210 PF13007 Transposase C of IS166 homeodomain AM393_RS01210 PF13817 IS66 C-terminal element AM393_RS01210 PF03050 Transposase IS66 family AM393_RS01210 PF13005 zinc-finger binding domain of transposase IS66 AM393_RS01215 PF00005 ABC transporter AM393_RS01220 PF00589 Phage integrase family AM393_RS01220 PF13356 Arm DNA-binding domain AM393_RS01225 PF00425 chorismate binding enzyme AM393_RS01230 PF07690 Major Facilitator Superfamily AM393_RS01235 PF00664 ABC transporter transmembrane region AM393_RS01235 PF00005 ABC transporter AM393_RS01240 PF00005 ABC transporter AM393_RS01240 PF00664 ABC transporter transmembrane region AM393_RS01240 PF04954 Siderophore-interacting protein AM393_RS01240 PF08021 Siderophore-interacting FAD-binding domain AM393_RS01250 PF00550 Phosphopantetheine attachment site AM393_RS01250 PF00501 AMP-binding enzyme AM393_RS01250 PF08242 Methyltransferase domain AM393_RS01250 PF00668 Condensation domain AM393_RS01255 PF00550 Phosphopantetheine attachment site AM393_RS01255 PF02801 Beta-ketoacyl synthase, C-terminal domain AM393_RS01255 PF00109 Beta-ketoacyl synthase, N-terminal domain AM393_RS01255 PF16197 Ketoacyl-synthetase C-terminal extension AM393_RS01255 PF00698 Acyl transferase domain AM393_RS01255 PF00668 Condensation domain AM393_RS01265 PF00975 Thioesterase domain AM393_RS01270 PF13193 AMP-binding enzyme C-terminal domain AM393_RS01270 PF00501 AMP-binding enzyme AM393_RS01275 PF00593 TonB dependent receptor AM393_RS01275 PF07715 TonB-dependent Receptor Plug Domain AM393_RS01320 PF04956 TrbC/VIRB2 family AM393_RS01325 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM393_RS01350 PF03524 Conjugal transfer protein AM393_RS01355 PF03743 Bacterial conjugation TrbI-like protein AM393_RS01360 PF00437 Type II/IV secretion system protein AM393_RS01400 PF08401 Domain of unknown function (DUF1738) AM393_RS01400 PF18818 Metallopeptidase superfamily domain AM393_RS01415 PF17782 DprA winged helix domain AM393_RS01415 PF02481 DNA recombination-mediator protein A AM393_RS01445 PF00999 Sodium/hydrogen exchanger family AM393_RS01450 PF16925 Tetracyclin repressor-like, C-terminal domain AM393_RS01450 PF00440 Bacterial regulatory proteins, tetR family AM393_RS01455 PF00107 Zinc-binding dehydrogenase AM393_RS01455 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS01465 PF12146 Serine aminopeptidase, S33 AM393_RS01475 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM393_RS01475 PF01048 Phosphorylase superfamily AM393_RS01485 PF01554 MatE AM393_RS01500 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS01505 PF00561 alpha/beta hydrolase fold AM393_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS01515 PF03466 LysR substrate binding domain AM393_RS01520 PF08956 Domain of unknown function (DUF1869) AM393_RS01525 PF09313 Domain of unknown function (DUF1971) AM393_RS01530 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS01530 PF00563 EAL domain AM393_RS01530 PF03707 Bacterial signalling protein N terminal repeat AM393_RS01530 PF13188 PAS domain AM393_RS01545 PF00083 Sugar (and other) transporter AM393_RS01545 PF07690 Major Facilitator Superfamily AM393_RS01555 PF03466 LysR substrate binding domain AM393_RS01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS01560 PF14552 Tautomerase enzyme AM393_RS01570 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM393_RS01570 PF05221 S-adenosyl-L-homocysteine hydrolase AM393_RS01575 PF02277 Phosphoribosyltransferase AM393_RS01580 PF02654 Cobalamin-5-phosphate synthase AM393_RS01585 PF04363 Protein of unknown function (DUF496) AM393_RS01590 PF04632 Fusaric acid resistance protein family AM393_RS01595 PF06445 GyrI-like small molecule binding domain AM393_RS01600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS01610 PF00768 D-alanyl-D-alanine carboxypeptidase AM393_RS01610 PF07943 Penicillin-binding protein 5, C-terminal domain AM393_RS01615 PF00929 Exonuclease AM393_RS01615 PF08411 Exonuclease C-terminal AM393_RS01620 PF03144 Elongation factor Tu domain 2 AM393_RS01620 PF03764 Elongation factor G, domain IV AM393_RS01620 PF00679 Elongation factor G C-terminus AM393_RS01620 PF14492 Elongation Factor G, domain II AM393_RS01620 PF00009 Elongation factor Tu GTP binding domain AM393_RS01625 PF01022 Bacterial regulatory protein, arsR family AM393_RS01630 PF13520 Amino acid permease AM393_RS01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS01635 PF03466 LysR substrate binding domain AM393_RS01640 PF01370 NAD dependent epimerase/dehydratase family AM393_RS01645 PF08029 HisG, C-terminal domain AM393_RS01645 PF01634 ATP phosphoribosyltransferase AM393_RS01650 PF00815 Histidinol dehydrogenase AM393_RS01655 PF00155 Aminotransferase class I and II AM393_RS01660 PF08645 Polynucleotide kinase 3 phosphatase AM393_RS01660 PF00475 Imidazoleglycerol-phosphate dehydratase AM393_RS01665 PF00117 Glutamine amidotransferase class-I AM393_RS01670 PF00977 Histidine biosynthesis protein AM393_RS01675 PF00977 Histidine biosynthesis protein AM393_RS01680 PF01502 Phosphoribosyl-AMP cyclohydrolase AM393_RS01680 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM393_RS01685 PF00535 Glycosyl transferase family 2 AM393_RS01690 PF13439 Glycosyltransferase Family 4 AM393_RS01690 PF00534 Glycosyl transferases group 1 AM393_RS01700 PF03275 UDP-galactopyranose mutase AM393_RS01710 PF00005 ABC transporter AM393_RS01715 PF01061 ABC-2 type transporter AM393_RS01720 PF01370 NAD dependent epimerase/dehydratase family AM393_RS01725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM393_RS01725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM393_RS01725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM393_RS01730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM393_RS01730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM393_RS01730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM393_RS01730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM393_RS01735 PF01050 Mannose-6-phosphate isomerase AM393_RS01735 PF00483 Nucleotidyl transferase AM393_RS01740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM393_RS01740 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM393_RS01745 PF14667 Polysaccharide biosynthesis C-terminal domain AM393_RS01760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS01770 PF00534 Glycosyl transferases group 1 AM393_RS01770 PF13439 Glycosyltransferase Family 4 AM393_RS01775 PF02397 Bacterial sugar transferase AM393_RS01780 PF13439 Glycosyltransferase Family 4 AM393_RS01780 PF00534 Glycosyl transferases group 1 AM393_RS01795 PF13439 Glycosyltransferase Family 4 AM393_RS01795 PF00534 Glycosyl transferases group 1 AM393_RS01800 PF02706 Chain length determinant protein AM393_RS01800 PF13614 AAA domain AM393_RS01800 PF13807 G-rich domain on putative tyrosine kinase AM393_RS01805 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM393_RS01810 PF02563 Polysaccharide biosynthesis/export protein AM393_RS01810 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM393_RS01810 PF10531 SLBB domain AM393_RS01815 PF14052 Capsule assembly protein Wzi AM393_RS01820 PF01569 PAP2 superfamily AM393_RS01825 PF00483 Nucleotidyl transferase AM393_RS01830 PF03471 Transporter associated domain AM393_RS01830 PF00571 CBS domain AM393_RS01830 PF03741 Integral membrane protein TerC family AM393_RS01835 PF05170 AsmA family AM393_RS01840 PF00692 dUTPase AM393_RS01845 PF00485 Phosphoribulokinase / Uridine kinase family AM393_RS01850 PF00730 HhH-GPD superfamily base excision DNA repair protein AM393_RS01850 PF06029 AlkA N-terminal domain AM393_RS01855 PF00012 Hsp70 protein AM393_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS01860 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS01865 PF00486 Transcriptional regulatory protein, C terminal AM393_RS01865 PF00072 Response regulator receiver domain AM393_RS01875 PF00375 Sodium:dicarboxylate symporter family AM393_RS01880 PF13533 Biotin-lipoyl like AM393_RS01885 PF00873 AcrB/AcrD/AcrF family AM393_RS01890 PF00873 AcrB/AcrD/AcrF family AM393_RS01895 PF07690 Major Facilitator Superfamily AM393_RS01900 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS01900 PF00672 HAMP domain AM393_RS01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS01905 PF00486 Transcriptional regulatory protein, C terminal AM393_RS01905 PF00072 Response regulator receiver domain AM393_RS01910 PF16325 Peptidase family U32 C-terminal domain AM393_RS01910 PF01136 Peptidase family U32 AM393_RS01915 PF00781 Diacylglycerol kinase catalytic domain AM393_RS01920 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS01925 PF07690 Major Facilitator Superfamily AM393_RS01930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS01930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS01935 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS01935 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS01940 PF04198 Putative sugar-binding domain AM393_RS01945 PF00356 Bacterial regulatory proteins, lacI family AM393_RS01950 PF00106 short chain dehydrogenase AM393_RS01960 PF07690 Major Facilitator Superfamily AM393_RS01965 PF01791 DeoC/LacD family aldolase AM393_RS01970 PF08543 Phosphomethylpyrimidine kinase AM393_RS01975 PF02110 Hydroxyethylthiazole kinase family AM393_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS01985 PF03466 LysR substrate binding domain AM393_RS01990 PF13382 Adenine deaminase C-terminal domain AM393_RS01990 PF01979 Amidohydrolase family AM393_RS01995 PF00860 Permease family AM393_RS02000 PF03466 LysR substrate binding domain AM393_RS02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS02005 PF11776 Nickel/cobalt transporter regulator AM393_RS02015 PF10609 NUBPL iron-transfer P-loop NTPase AM393_RS02020 PF09334 tRNA synthetases class I (M) AM393_RS02020 PF01588 Putative tRNA binding domain AM393_RS02025 PF07308 Protein of unknown function (DUF1456) AM393_RS02030 PF00072 Response regulator receiver domain AM393_RS02030 PF04397 LytTr DNA-binding domain AM393_RS02035 PF06580 Histidine kinase AM393_RS02035 PF07694 5TMR of 5TMR-LYT AM393_RS02045 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS02050 PF00005 ABC transporter AM393_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS02060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM393_RS02065 PF14310 Fibronectin type III-like domain AM393_RS02065 PF00933 Glycosyl hydrolase family 3 N terminal domain AM393_RS02065 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM393_RS02070 PF09330 D-lactate dehydrogenase, membrane binding AM393_RS02070 PF01565 FAD binding domain AM393_RS02080 PF00768 D-alanyl-D-alanine carboxypeptidase AM393_RS02085 PF04893 Yip1 domain AM393_RS02090 PF09335 SNARE associated Golgi protein AM393_RS02095 PF02321 Outer membrane efflux protein AM393_RS02100 PF08241 Methyltransferase domain AM393_RS02105 PF00232 Glycosyl hydrolase family 1 AM393_RS02110 PF02378 Phosphotransferase system, EIIC AM393_RS02110 PF00367 phosphotransferase system, EIIB AM393_RS02110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM393_RS02115 PF03123 CAT RNA binding domain AM393_RS02115 PF00874 PRD domain AM393_RS02120 PF04966 Carbohydrate-selective porin, OprB family AM393_RS02125 PF01207 Dihydrouridine synthase (Dus) AM393_RS02130 PF03788 LrgA family AM393_RS02135 PF04172 LrgB-like family AM393_RS02140 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM393_RS02140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM393_RS02150 PF02698 DUF218 domain AM393_RS02155 PF02653 Branched-chain amino acid transport system / permease component AM393_RS02160 PF00005 ABC transporter AM393_RS02165 PF13407 Periplasmic binding protein domain AM393_RS02170 PF00356 Bacterial regulatory proteins, lacI family AM393_RS02180 PF04235 Protein of unknown function (DUF418) AM393_RS02185 PF01227 GTP cyclohydrolase I AM393_RS02190 PF00756 Putative esterase AM393_RS02195 PF00593 TonB dependent receptor AM393_RS02195 PF07715 TonB-dependent Receptor Plug Domain AM393_RS02205 PF00324 Amino acid permease AM393_RS02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS02210 PF03466 LysR substrate binding domain AM393_RS02220 PF03601 Conserved hypothetical protein 698 AM393_RS02225 PF01261 Xylose isomerase-like TIM barrel AM393_RS02230 PF02378 Phosphotransferase system, EIIC AM393_RS02230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS02235 PF00294 pfkB family carbohydrate kinase AM393_RS02240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS02240 PF00381 PTS HPr component phosphorylation site AM393_RS02250 PF07690 Major Facilitator Superfamily AM393_RS02255 PF03692 Putative zinc- or iron-chelating domain AM393_RS02260 PF09285 Elongation factor P, C-terminal AM393_RS02260 PF01132 Elongation factor P (EF-P) OB domain AM393_RS02260 PF08207 Elongation factor P (EF-P) KOW-like domain AM393_RS02265 PF03786 D-mannonate dehydratase (UxuA) AM393_RS02270 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS02270 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS02275 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM393_RS02275 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM393_RS02280 PF01569 PAP2 superfamily AM393_RS02285 PF00877 NlpC/P60 family AM393_RS02295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS02300 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS02305 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS02310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS02310 PF00005 ABC transporter AM393_RS02315 PF13989 YejG-like protein AM393_RS02320 PF07690 Major Facilitator Superfamily AM393_RS02325 PF00849 RNA pseudouridylate synthase AM393_RS02325 PF01479 S4 domain AM393_RS02330 PF04851 Type III restriction enzyme, res subunit AM393_RS02330 PF00271 Helicase conserved C-terminal domain AM393_RS02335 PF01386 Ribosomal L25p family AM393_RS02345 PF00144 Beta-lactamase AM393_RS02350 PF00293 NUDIX domain AM393_RS02355 PF00455 DeoR C terminal sensor domain AM393_RS02355 PF08220 DeoR-like helix-turn-helix domain AM393_RS02360 PF04245 37-kD nucleoid-associated bacterial protein AM393_RS02365 PF07208 Protein of unknown function (DUF1414) AM393_RS02370 PF00884 Sulfatase AM393_RS02370 PF11893 Domain of unknown function (DUF3413) AM393_RS02380 PF13356 Arm DNA-binding domain AM393_RS02380 PF00589 Phage integrase family AM393_RS02430 PF01594 AI-2E family transporter AM393_RS02435 PF03974 Ecotin AM393_RS02440 PF06039 Malate:quinone oxidoreductase (Mqo) AM393_RS02445 PF00916 Sulfate permease family AM393_RS02445 PF01740 STAS domain AM393_RS02450 PF03448 MgtE intracellular N domain AM393_RS02450 PF00571 CBS domain AM393_RS02450 PF01769 Divalent cation transporter AM393_RS02455 PF00005 ABC transporter AM393_RS02460 PF13532 2OG-Fe(II) oxygenase superfamily AM393_RS02465 PF12833 Helix-turn-helix domain AM393_RS02465 PF02805 Metal binding domain of Ada AM393_RS02465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM393_RS02465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM393_RS02470 PF02424 ApbE family AM393_RS02475 PF00267 Gram-negative porin AM393_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS02480 PF01627 Hpt domain AM393_RS02480 PF16359 RcsD-ABL domain AM393_RS02485 PF00072 Response regulator receiver domain AM393_RS02485 PF00196 Bacterial regulatory proteins, luxR family AM393_RS02490 PF00072 Response regulator receiver domain AM393_RS02490 PF09456 RcsC Alpha-Beta-Loop (ABL) AM393_RS02490 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS02495 PF03989 DNA gyrase C-terminal domain, beta-propeller AM393_RS02495 PF00521 DNA gyrase/topoisomerase IV, subunit A AM393_RS02510 PF02867 Ribonucleotide reductase, barrel domain AM393_RS02510 PF03477 ATP cone domain AM393_RS02510 PF00317 Ribonucleotide reductase, all-alpha domain AM393_RS02515 PF00268 Ribonucleotide reductase, small chain AM393_RS02520 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS02530 PF03009 Glycerophosphoryl diester phosphodiesterase family AM393_RS02535 PF07690 Major Facilitator Superfamily AM393_RS02540 PF04324 BFD-like [2Fe-2S] binding domain AM393_RS02540 PF01266 FAD dependent oxidoreductase AM393_RS02545 PF00890 FAD binding domain AM393_RS02550 PF13183 4Fe-4S dicluster domain AM393_RS02550 PF02754 Cysteine-rich domain AM393_RS02555 PF03328 HpcH/HpaI aldolase/citrate lyase family AM393_RS02560 PF07690 Major Facilitator Superfamily AM393_RS02565 PF13378 Enolase C-terminal domain-like AM393_RS02565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM393_RS02570 PF01614 Bacterial transcriptional regulator AM393_RS02570 PF09339 IclR helix-turn-helix domain AM393_RS02575 PF00994 Probable molybdopterin binding domain AM393_RS02580 PF07437 YfaZ precursor AM393_RS02590 PF04754 Putative transposase, YhgA-like AM393_RS02595 PF00293 NUDIX domain AM393_RS02600 PF13193 AMP-binding enzyme C-terminal domain AM393_RS02600 PF00501 AMP-binding enzyme AM393_RS02605 PF13378 Enolase C-terminal domain-like AM393_RS02610 PF00378 Enoyl-CoA hydratase/isomerase AM393_RS02615 PF12697 Alpha/beta hydrolase family AM393_RS02620 PF16582 Middle domain of thiamine pyrophosphate AM393_RS02620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS02620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS02625 PF00425 chorismate binding enzyme AM393_RS02630 PF13673 Acetyltransferase (GNAT) domain AM393_RS02635 PF12706 Beta-lactamase superfamily domain AM393_RS02640 PF00361 Proton-conducting membrane transporter AM393_RS02645 PF00361 Proton-conducting membrane transporter AM393_RS02650 PF00361 Proton-conducting membrane transporter AM393_RS02650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM393_RS02655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM393_RS02660 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM393_RS02665 PF12838 4Fe-4S dicluster domain AM393_RS02670 PF00146 NADH dehydrogenase AM393_RS02675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM393_RS02675 PF00384 Molybdopterin oxidoreductase AM393_RS02675 PF01568 Molydopterin dinucleotide binding domain AM393_RS02675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM393_RS02680 PF10531 SLBB domain AM393_RS02680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM393_RS02680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM393_RS02690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM393_RS02690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM393_RS02695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM393_RS02700 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM393_RS02710 PF03466 LysR substrate binding domain AM393_RS02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS02715 PF00155 Aminotransferase class I and II AM393_RS02725 PF02080 TrkA-C domain AM393_RS02725 PF03600 Citrate transporter AM393_RS02730 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS02735 PF03887 YfbU domain AM393_RS02740 PF04217 Protein of unknown function, DUF412 AM393_RS02745 PF00871 Acetokinase family AM393_RS02750 PF01515 Phosphate acetyl/butaryl transferase AM393_RS02750 PF07085 DRTGG domain AM393_RS02755 PF00293 NUDIX domain AM393_RS02760 PF12850 Calcineurin-like phosphoesterase superfamily domain AM393_RS02765 PF02798 Glutathione S-transferase, N-terminal domain AM393_RS02765 PF14834 Glutathione S-transferase, C-terminal domain AM393_RS02770 PF02798 Glutathione S-transferase, N-terminal domain AM393_RS02770 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS02775 PF02152 Dihydroneopterin aldolase AM393_RS02780 PF01370 NAD dependent epimerase/dehydratase family AM393_RS02780 PF08338 Domain of unknown function (DUF1731) AM393_RS02785 PF13302 Acetyltransferase (GNAT) domain AM393_RS02790 PF00005 ABC transporter AM393_RS02795 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS02805 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS02810 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS02815 PF02441 Flavoprotein AM393_RS02820 PF00156 Phosphoribosyl transferase domain AM393_RS02825 PF02674 Colicin V production protein AM393_RS02830 PF05036 Sporulation related domain AM393_RS02835 PF08245 Mur ligase middle domain AM393_RS02835 PF02875 Mur ligase family, glutamate ligase domain AM393_RS02840 PF01039 Carboxyl transferase domain AM393_RS02840 PF17848 Acetyl-coA carboxylase zinc finger domain AM393_RS02845 PF09335 SNARE associated Golgi protein AM393_RS02850 PF01416 tRNA pseudouridine synthase AM393_RS02855 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM393_RS02855 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM393_RS02860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM393_RS02860 PF11890 Domain of unknown function (DUF3410) AM393_RS02860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS02870 PF07690 Major Facilitator Superfamily AM393_RS02875 PF00109 Beta-ketoacyl synthase, N-terminal domain AM393_RS02875 PF02801 Beta-ketoacyl synthase, C-terminal domain AM393_RS02880 PF01266 FAD dependent oxidoreductase AM393_RS02880 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS02885 PF08891 YfcL protein AM393_RS02890 PF04315 Elongation factor P hydroxylase AM393_RS02895 PF01925 Sulfite exporter TauE/SafE AM393_RS02900 PF03411 Penicillin-insensitive murein endopeptidase AM393_RS02905 PF01264 Chorismate synthase AM393_RS02910 PF05175 Methyltransferase small domain AM393_RS02915 PF01713 Smr domain AM393_RS02920 PF00300 Histidine phosphatase superfamily (branch 1) AM393_RS02925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM393_RS02925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM393_RS02925 PF00378 Enoyl-CoA hydratase/isomerase AM393_RS02930 PF02803 Thiolase, C-terminal domain AM393_RS02930 PF00108 Thiolase, N-terminal domain AM393_RS02935 PF04175 Protein of unknown function (DUF406) AM393_RS02940 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM393_RS02945 PF04333 MlaA lipoprotein AM393_RS02950 PF01226 Formate/nitrite transporter AM393_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS02970 PF03466 LysR substrate binding domain AM393_RS02975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM393_RS02980 PF07690 Major Facilitator Superfamily AM393_RS02985 PF00155 Aminotransferase class I and II AM393_RS02995 PF07694 5TMR of 5TMR-LYT AM393_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS02995 PF06580 Histidine kinase AM393_RS03000 PF00072 Response regulator receiver domain AM393_RS03000 PF04397 LytTr DNA-binding domain AM393_RS03005 PF02685 Glucokinase AM393_RS03010 PF00654 Voltage gated chloride channel AM393_RS03015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS03015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS03015 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS03020 PF00248 Aldo/keto reductase family AM393_RS03025 PF10697 Protein of unknown function (DUF2502) AM393_RS03030 PF01566 Natural resistance-associated macrophage protein AM393_RS03035 PF01773 Na+ dependent nucleoside transporter N-terminus AM393_RS03035 PF07662 Na+ dependent nucleoside transporter C-terminus AM393_RS03035 PF07670 Nucleoside recognition AM393_RS03040 PF00563 EAL domain AM393_RS03040 PF05231 MASE1 AM393_RS03055 PF07037 Putative transcription regulator (DUF1323) AM393_RS03060 PF07037 Putative transcription regulator (DUF1323) AM393_RS03065 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM393_RS03090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS03090 PF03466 LysR substrate binding domain AM393_RS03095 PF13593 SBF-like CPA transporter family (DUF4137) AM393_RS03100 PF12843 Putative quorum-sensing-regulated virulence factor AM393_RS03105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM393_RS03105 PF12826 Helix-hairpin-helix motif AM393_RS03105 PF01653 NAD-dependent DNA ligase adenylation domain AM393_RS03105 PF03120 NAD-dependent DNA ligase OB-fold domain AM393_RS03105 PF00533 BRCA1 C Terminus (BRCT) domain AM393_RS03110 PF04354 ZipA, C-terminal FtsZ-binding domain AM393_RS03120 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS03125 PF00381 PTS HPr component phosphorylation site AM393_RS03130 PF00391 PEP-utilising enzyme, mobile domain AM393_RS03130 PF02896 PEP-utilising enzyme, TIM barrel domain AM393_RS03130 PF05524 PEP-utilising enzyme, N-terminal AM393_RS03135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM393_RS03145 PF08543 Phosphomethylpyrimidine kinase AM393_RS03150 PF00392 Bacterial regulatory proteins, gntR family AM393_RS03150 PF00155 Aminotransferase class I and II AM393_RS03155 PF13474 SnoaL-like domain AM393_RS03160 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS03165 PF00005 ABC transporter AM393_RS03170 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS03190 PF04261 Dyp-type peroxidase family AM393_RS03195 PF06572 Protein of unknown function (DUF1131) AM393_RS03200 PF11143 Protein of unknown function (DUF2919) AM393_RS03205 PF00583 Acetyltransferase (GNAT) family AM393_RS03210 PF01520 N-acetylmuramoyl-L-alanine amidase AM393_RS03215 PF01218 Coproporphyrinogen III oxidase AM393_RS03220 PF12833 Helix-turn-helix domain AM393_RS03225 PF16365 Ethanolamine utilization protein EutK C-terminus AM393_RS03225 PF00936 BMC domain AM393_RS03230 PF00936 BMC domain AM393_RS03235 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM393_RS03240 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM393_RS03245 PF06277 Ethanolamine utilisation protein EutA AM393_RS03250 PF04346 Ethanolamine utilisation protein, EutH AM393_RS03255 PF00465 Iron-containing alcohol dehydrogenase AM393_RS03265 PF00171 Aldehyde dehydrogenase family AM393_RS03270 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM393_RS03275 PF00936 BMC domain AM393_RS03280 PF01515 Phosphate acetyl/butaryl transferase AM393_RS03285 PF01923 Cobalamin adenosyltransferase AM393_RS03290 PF06249 Ethanolamine utilisation protein EutQ AM393_RS03295 PF10662 Ethanolamine utilisation - propanediol utilisation AM393_RS03300 PF00936 BMC domain AM393_RS03305 PF00390 Malic enzyme, N-terminal domain AM393_RS03305 PF03949 Malic enzyme, NAD binding domain AM393_RS03305 PF01515 Phosphate acetyl/butaryl transferase AM393_RS03310 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM393_RS03315 PF00456 Transketolase, thiamine diphosphate binding domain AM393_RS03315 PF02780 Transketolase, C-terminal domain AM393_RS03315 PF02779 Transketolase, pyrimidine binding domain AM393_RS03320 PF06674 Protein of unknown function (DUF1176) AM393_RS03325 PF00293 NUDIX domain AM393_RS03330 PF13247 4Fe-4S dicluster domain AM393_RS03330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS03330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM393_RS03340 PF00873 AcrB/AcrD/AcrF family AM393_RS03345 PF03960 ArsC family AM393_RS03350 PF07687 Peptidase dimerisation domain AM393_RS03350 PF01546 Peptidase family M20/M25/M40 AM393_RS03355 PF13980 Uncharacterised protein family (UPF0370) AM393_RS03360 PF02230 Phospholipase/Carboxylesterase AM393_RS03365 PF17176 tRNA-binding domain AM393_RS03365 PF05127 Helicase AM393_RS03365 PF13718 GNAT acetyltransferase 2 AM393_RS03365 PF08351 Domain of unknown function (DUF1726) AM393_RS03370 PF04228 Putative neutral zinc metallopeptidase AM393_RS03375 PF01259 SAICAR synthetase AM393_RS03380 PF06804 NlpB/DapX lipoprotein AM393_RS03385 PF00701 Dihydrodipicolinate synthetase family AM393_RS03390 PF01842 ACT domain AM393_RS03395 PF00578 AhpC/TSA family AM393_RS03400 PF01594 AI-2E family transporter AM393_RS03405 PF01435 Peptidase family M48 AM393_RS03410 PF03960 ArsC family AM393_RS03415 PF04754 Putative transposase, YhgA-like AM393_RS03420 PF00308 Bacterial dnaA protein AM393_RS03425 PF00860 Permease family AM393_RS03435 PF00232 Glycosyl hydrolase family 1 AM393_RS03440 PF00480 ROK family AM393_RS03445 PF00586 AIR synthase related protein, N-terminal domain AM393_RS03445 PF02769 AIR synthase related protein, C-terminal domain AM393_RS03450 PF00551 Formyl transferase AM393_RS03455 PF13089 Polyphosphate kinase N-terminal domain AM393_RS03455 PF17941 Polyphosphate kinase C-terminal domain 1 AM393_RS03455 PF13090 Polyphosphate kinase C-terminal domain 2 AM393_RS03455 PF02503 Polyphosphate kinase middle domain AM393_RS03460 PF02541 Ppx/GppA phosphatase family AM393_RS03465 PF00563 EAL domain AM393_RS03465 PF05231 MASE1 AM393_RS03470 PF11119 Protein of unknown function (DUF2633) AM393_RS03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS03475 PF03466 LysR substrate binding domain AM393_RS03485 PF04055 Radical SAM superfamily AM393_RS03485 PF13186 Iron-sulfur cluster-binding domain AM393_RS03490 PF00884 Sulfatase AM393_RS03495 PF00958 GMP synthase C terminal domain AM393_RS03495 PF00117 Glutamine amidotransferase class-I AM393_RS03495 PF02540 NAD synthase AM393_RS03500 PF00478 IMP dehydrogenase / GMP reductase domain AM393_RS03500 PF00571 CBS domain AM393_RS03505 PF13742 OB-fold nucleic acid binding domain AM393_RS03505 PF02601 Exonuclease VII, large subunit AM393_RS03510 PF07191 zinc-ribbons AM393_RS03520 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM393_RS03520 PF01926 50S ribosome-binding GTPase AM393_RS03525 PF13360 PQQ-like domain AM393_RS03530 PF09976 Tetratricopeptide repeat-like domain AM393_RS03535 PF13393 Histidyl-tRNA synthetase AM393_RS03535 PF03129 Anticodon binding domain AM393_RS03540 PF04551 GcpE protein AM393_RS03545 PF13464 Domain of unknown function (DUF4115) AM393_RS03550 PF04055 Radical SAM superfamily AM393_RS03555 PF00334 Nucleoside diphosphate kinase AM393_RS03560 PF00912 Transglycosylase AM393_RS03560 PF00905 Penicillin binding protein transpeptidase domain AM393_RS03560 PF06832 Penicillin-Binding Protein C-terminus Family AM393_RS03565 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM393_RS03565 PF00207 Alpha-2-macroglobulin family AM393_RS03565 PF07703 Alpha-2-macroglobulin bait region domain AM393_RS03565 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM393_RS03565 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM393_RS03565 PF17962 Bacterial macroglobulin domain 6 AM393_RS03565 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM393_RS03565 PF01835 MG2 domain AM393_RS03565 PF07678 A-macroglobulin TED domain AM393_RS03570 PF00581 Rhodanese-like domain AM393_RS03580 PF07179 SseB protein N-terminal domain AM393_RS03580 PF14581 SseB protein C-terminal domain AM393_RS03585 PF12404 Peptidase AM393_RS03585 PF00883 Cytosol aminopeptidase family, catalytic domain AM393_RS03590 PF04384 Iron-sulphur cluster assembly AM393_RS03595 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS03600 PF00012 Hsp70 protein AM393_RS03605 PF07743 HSCB C-terminal oligomerisation domain AM393_RS03605 PF00226 DnaJ domain AM393_RS03610 PF01521 Iron-sulphur cluster biosynthesis AM393_RS03615 PF01592 NifU-like N terminal domain AM393_RS03620 PF00266 Aminotransferase class-V AM393_RS03625 PF02082 Transcriptional regulator AM393_RS03630 PF00588 SpoU rRNA Methylase family AM393_RS03635 PF00459 Inositol monophosphatase family AM393_RS03645 PF03824 High-affinity nickel-transport protein AM393_RS03650 PF06226 Protein of unknown function (DUF1007) AM393_RS03655 PF00874 PRD domain AM393_RS03660 PF12832 MFS_1 like family AM393_RS03665 PF01263 Aldose 1-epimerase AM393_RS03670 PF00083 Sugar (and other) transporter AM393_RS03675 PF17128 Domain of unknown function (DUF5107) AM393_RS03675 PF13181 Tetratricopeptide repeat AM393_RS03680 PF00480 ROK family AM393_RS03685 PF07681 DoxX AM393_RS03690 PF00464 Serine hydroxymethyltransferase AM393_RS03700 PF00175 Oxidoreductase NAD-binding domain AM393_RS03700 PF00970 Oxidoreductase FAD-binding domain AM393_RS03700 PF00042 Globin AM393_RS03705 PF00543 Nitrogen regulatory protein P-II AM393_RS03710 PF00072 Response regulator receiver domain AM393_RS03710 PF00158 Sigma-54 interaction domain AM393_RS03715 PF13942 YfhG lipoprotein AM393_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS03720 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS03730 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM393_RS03730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM393_RS03730 PF02769 AIR synthase related protein, C-terminal domain AM393_RS03735 PF01464 Transglycosylase SLT domain AM393_RS03735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS03740 PF14437 MafB19-like deaminase AM393_RS03750 PF01418 Helix-turn-helix domain, rpiR family AM393_RS03750 PF01380 SIS domain AM393_RS03755 PF12838 4Fe-4S dicluster domain AM393_RS03760 PF01648 4'-phosphopantetheinyl transferase superfamily AM393_RS03765 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM393_RS03770 PF02565 Recombination protein O C terminal AM393_RS03770 PF11967 Recombination protein O N terminal AM393_RS03775 PF01926 50S ribosome-binding GTPase AM393_RS03775 PF07650 KH domain AM393_RS03780 PF14622 Ribonuclease-III-like AM393_RS03780 PF00035 Double-stranded RNA binding motif AM393_RS03785 PF10502 Signal peptidase, peptidase S26 AM393_RS03790 PF00679 Elongation factor G C-terminus AM393_RS03790 PF00009 Elongation factor Tu GTP binding domain AM393_RS03790 PF03144 Elongation factor Tu domain 2 AM393_RS03790 PF06421 GTP-binding protein LepA C-terminus AM393_RS03800 PF17188 MucB/RseB C-terminal domain AM393_RS03800 PF03888 MucB/RseB N-terminal domain AM393_RS03805 PF03872 Anti sigma-E protein RseA, N-terminal domain AM393_RS03805 PF03873 Anti sigma-E protein RseA, C-terminal domain AM393_RS03810 PF04542 Sigma-70 region 2 AM393_RS03810 PF08281 Sigma-70, region 4 AM393_RS03815 PF00890 FAD binding domain AM393_RS03815 PF02910 Fumarate reductase flavoprotein C-term AM393_RS03820 PF05175 Methyltransferase small domain AM393_RS03825 PF00270 DEAD/DEAH box helicase AM393_RS03825 PF00271 Helicase conserved C-terminal domain AM393_RS03830 PF01228 Glycine radical AM393_RS03835 PF03167 Uracil DNA glycosylase superfamily AM393_RS03840 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM393_RS03840 PF00588 SpoU rRNA Methylase family AM393_RS03850 PF00085 Thioredoxin AM393_RS03855 PF03942 DTW domain AM393_RS03860 PF00583 Acetyltransferase (GNAT) family AM393_RS03860 PF13380 CoA binding domain AM393_RS03860 PF13607 Succinyl-CoA ligase like flavodoxin domain AM393_RS03865 PF13091 PLD-like domain AM393_RS03870 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM393_RS03875 PF00083 Sugar (and other) transporter AM393_RS03900 PF17871 AAA lid domain AM393_RS03900 PF02861 Clp amino terminal domain, pathogenicity island component AM393_RS03900 PF10431 C-terminal, D2-small domain, of ClpB protein AM393_RS03900 PF07724 AAA domain (Cdc48 subfamily) AM393_RS03900 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS03905 PF02578 Multi-copper polyphenol oxidoreductase laccase AM393_RS03910 PF00849 RNA pseudouridylate synthase AM393_RS03910 PF01479 S4 domain AM393_RS03915 PF13525 Outer membrane lipoprotein AM393_RS03925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM393_RS03930 PF01817 Chorismate mutase type II AM393_RS03930 PF00800 Prephenate dehydratase AM393_RS03935 PF08450 SMP-30/Gluconolactonase/LRE-like region AM393_RS03940 PF02153 Prephenate dehydrogenase AM393_RS03940 PF01817 Chorismate mutase type II AM393_RS03945 PF00793 DAHP synthetase I family AM393_RS03950 PF13689 YfiR/HmsC-like AM393_RS03955 PF17152 Periplasmic sensor domain AM393_RS03955 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS03960 PF00691 OmpA family AM393_RS03975 PF01245 Ribosomal protein L19 AM393_RS03980 PF01746 tRNA (Guanine-1)-methyltransferase AM393_RS03985 PF01782 RimM N-terminal domain AM393_RS03985 PF05239 PRC-barrel domain AM393_RS03990 PF00886 Ribosomal protein S16 AM393_RS03995 PF02881 SRP54-type protein, helical bundle domain AM393_RS03995 PF02978 Signal peptide binding domain AM393_RS03995 PF00448 SRP54-type protein, GTPase domain AM393_RS04000 PF01578 Cytochrome C assembly protein AM393_RS04005 PF01595 Cyclin M transmembrane N-terminal domain AM393_RS04005 PF03471 Transporter associated domain AM393_RS04005 PF00571 CBS domain AM393_RS04010 PF01025 GrpE AM393_RS04020 PF01513 ATP-NAD kinase AM393_RS04025 PF02463 RecF/RecN/SMC N terminal domain AM393_RS04030 PF04355 SmpA / OmlA family AM393_RS04035 PF03658 RnfH family Ubiquitin AM393_RS04040 PF03364 Polyketide cyclase / dehydrase and lipid transport AM393_RS04045 PF01668 SmpB protein AM393_RS04060 PF03466 LysR substrate binding domain AM393_RS04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS04070 PF12833 Helix-turn-helix domain AM393_RS04070 PF06445 GyrI-like small molecule binding domain AM393_RS04075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS04075 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS04080 PF00873 AcrB/AcrD/AcrF family AM393_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS04090 PF03466 LysR substrate binding domain AM393_RS04095 PF00491 Arginase family AM393_RS04110 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS04115 PF00005 ABC transporter AM393_RS04120 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS04125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS04130 PF00106 short chain dehydrogenase AM393_RS04145 PF00196 Bacterial regulatory proteins, luxR family AM393_RS04145 PF00072 Response regulator receiver domain AM393_RS04150 PF00419 Fimbrial protein AM393_RS04155 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS04155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS04160 PF13954 PapC N-terminal domain AM393_RS04160 PF13953 PapC C-terminal domain AM393_RS04160 PF00577 Outer membrane usher protein AM393_RS04175 PF00577 Outer membrane usher protein AM393_RS04175 PF13953 PapC C-terminal domain AM393_RS04175 PF13954 PapC N-terminal domain AM393_RS04180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS04180 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS04185 PF16970 Type-1 fimbrial protein, A AM393_RS04190 PF00171 Aldehyde dehydrogenase family AM393_RS04195 PF01590 GAF domain AM393_RS04195 PF02954 Bacterial regulatory protein, Fis family AM393_RS04195 PF00158 Sigma-54 interaction domain AM393_RS04200 PF03466 LysR substrate binding domain AM393_RS04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS04205 PF02525 Flavodoxin-like fold AM393_RS04210 PF01022 Bacterial regulatory protein, arsR family AM393_RS04215 PF11127 Protein of unknown function (DUF2892) AM393_RS04215 PF00581 Rhodanese-like domain AM393_RS04230 PF00816 H-NS histone family AM393_RS04245 PF06610 L-alanine exporter AM393_RS04250 PF09400 Protein of unknown function (DUF2002) AM393_RS04255 PF05957 Bacterial protein of unknown function (DUF883) AM393_RS04260 PF00155 Aminotransferase class I and II AM393_RS04260 PF00392 Bacterial regulatory proteins, gntR family AM393_RS04265 PF02627 Carboxymuconolactone decarboxylase family AM393_RS04270 PF00462 Glutaredoxin AM393_RS04275 PF07972 NrdI Flavodoxin like AM393_RS04280 PF08343 Ribonucleotide reductase N-terminal AM393_RS04280 PF02867 Ribonucleotide reductase, barrel domain AM393_RS04280 PF00317 Ribonucleotide reductase, all-alpha domain AM393_RS04285 PF00268 Ribonucleotide reductase, small chain AM393_RS04290 PF00005 ABC transporter AM393_RS04290 PF00571 CBS domain AM393_RS04295 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS04300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM393_RS04305 PF03591 AzlC protein AM393_RS04310 PF05437 Branched-chain amino acid transport protein (AzlD) AM393_RS04315 PF01047 MarR family AM393_RS04320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS04320 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS04325 PF07690 Major Facilitator Superfamily AM393_RS04330 PF08502 LeuA allosteric (dimerisation) domain AM393_RS04330 PF00682 HMGL-like AM393_RS04335 PF12852 Cupin AM393_RS04335 PF12833 Helix-turn-helix domain AM393_RS04340 PF02664 S-Ribosylhomocysteinase (LuxS) AM393_RS04345 PF04262 Glutamate-cysteine ligase AM393_RS04350 PF09335 SNARE associated Golgi protein AM393_RS04355 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS04360 PF04972 BON domain AM393_RS04390 PF02599 Global regulator protein family AM393_RS04400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM393_RS04400 PF01411 tRNA synthetases class II (A) AM393_RS04400 PF02272 DHHA1 domain AM393_RS04405 PF02631 RecX family AM393_RS04410 PF00154 recA bacterial DNA recombination protein AM393_RS04415 PF02464 Competence-damaged protein AM393_RS04420 PF01297 Zinc-uptake complex component A periplasmic AM393_RS04425 PF00950 ABC 3 transport family AM393_RS04430 PF00005 ABC transporter AM393_RS04440 PF13406 Transglycosylase SLT domain AM393_RS04445 PF03608 PTS system enzyme II sorbitol-specific factor AM393_RS04450 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM393_RS04450 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM393_RS04455 PF03829 PTS system glucitol/sorbitol-specific IIA component AM393_RS04460 PF00106 short chain dehydrogenase AM393_RS04465 PF06923 Glucitol operon activator protein (GutM) AM393_RS04470 PF08220 DeoR-like helix-turn-helix domain AM393_RS04470 PF00455 DeoR C terminal sensor domain AM393_RS04475 PF01380 SIS domain AM393_RS04475 PF00571 CBS domain AM393_RS04480 PF01590 GAF domain AM393_RS04480 PF00158 Sigma-54 interaction domain AM393_RS04490 PF00301 Rubredoxin AM393_RS04490 PF00258 Flavodoxin AM393_RS04490 PF00753 Metallo-beta-lactamase superfamily AM393_RS04495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS04495 PF18113 Rubredoxin binding C-terminal domain AM393_RS04500 PF03824 High-affinity nickel-transport protein AM393_RS04505 PF00708 Acylphosphatase AM393_RS04505 PF01300 Telomere recombination AM393_RS04505 PF17788 HypF Kae1-like domain AM393_RS04505 PF07503 HypF finger AM393_RS04510 PF12800 4Fe-4S binding domain AM393_RS04510 PF13247 4Fe-4S dicluster domain AM393_RS04515 PF00356 Bacterial regulatory proteins, lacI family AM393_RS04520 PF00367 phosphotransferase system, EIIB AM393_RS04520 PF02378 Phosphotransferase system, EIIC AM393_RS04525 PF00232 Glycosyl hydrolase family 1 AM393_RS04530 PF08845 Toxin SymE, type I toxin-antitoxin system AM393_RS04535 PF01750 Hydrogenase maturation protease AM393_RS04540 PF07450 Formate hydrogenlyase maturation protein HycH AM393_RS04545 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM393_RS04550 PF12838 4Fe-4S dicluster domain AM393_RS04555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM393_RS04555 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM393_RS04555 PF00374 Nickel-dependent hydrogenase AM393_RS04560 PF00146 NADH dehydrogenase AM393_RS04565 PF00361 Proton-conducting membrane transporter AM393_RS04570 PF13247 4Fe-4S dicluster domain AM393_RS04580 PF11046 Transcriptional repressor of hyc and hyp operons AM393_RS04585 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM393_RS04590 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM393_RS04595 PF01455 HupF/HypC family AM393_RS04600 PF01924 Hydrogenase formation hypA family AM393_RS04605 PF02769 AIR synthase related protein, C-terminal domain AM393_RS04605 PF00586 AIR synthase related protein, N-terminal domain AM393_RS04610 PF02954 Bacterial regulatory protein, Fis family AM393_RS04610 PF01590 GAF domain AM393_RS04610 PF00158 Sigma-54 interaction domain AM393_RS04615 PF00232 Glycosyl hydrolase family 1 AM393_RS04625 PF02264 LamB porin AM393_RS04635 PF02378 Phosphotransferase system, EIIC AM393_RS04640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS04645 PF02378 Phosphotransferase system, EIIC AM393_RS04650 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM393_RS04655 PF00480 ROK family AM393_RS04660 PF00356 Bacterial regulatory proteins, lacI family AM393_RS04665 PF01297 Zinc-uptake complex component A periplasmic AM393_RS04670 PF00005 ABC transporter AM393_RS04675 PF00950 ABC 3 transport family AM393_RS04680 PF00950 ABC 3 transport family AM393_RS04685 PF11756 Nitrous oxide-stimulated promoter AM393_RS04695 PF03547 Membrane transport protein AM393_RS04700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS04700 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS04700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS04710 PF07715 TonB-dependent Receptor Plug Domain AM393_RS04710 PF00593 TonB dependent receptor AM393_RS04715 PF05171 Haemin-degrading HemS.ChuX domain AM393_RS04720 PF01497 Periplasmic binding protein AM393_RS04725 PF01032 FecCD transport family AM393_RS04730 PF00005 ABC transporter AM393_RS04750 PF00488 MutS domain V AM393_RS04750 PF05190 MutS family domain IV AM393_RS04750 PF05192 MutS domain III AM393_RS04750 PF05188 MutS domain II AM393_RS04750 PF01624 MutS domain I AM393_RS04755 PF01848 Hok/gef family AM393_RS04765 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM393_RS04770 PF02441 Flavoprotein AM393_RS04775 PF01047 MarR family AM393_RS04780 PF03466 LysR substrate binding domain AM393_RS04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS04785 PF07690 Major Facilitator Superfamily AM393_RS04795 PF00140 Sigma-70 factor, region 1.2 AM393_RS04795 PF04545 Sigma-70, region 4 AM393_RS04795 PF04539 Sigma-70 region 3 AM393_RS04795 PF04542 Sigma-70 region 2 AM393_RS04800 PF01476 LysM domain AM393_RS04800 PF01551 Peptidase family M23 AM393_RS04810 PF01975 Survival protein SurE AM393_RS04815 PF01142 tRNA pseudouridine synthase D (TruD) AM393_RS04820 PF02542 YgbB family AM393_RS04825 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM393_RS04830 PF04977 Septum formation initiator AM393_RS04835 PF12084 Protein of unknown function (DUF3561) AM393_RS04845 PF00009 Elongation factor Tu GTP binding domain AM393_RS04850 PF01507 Phosphoadenosine phosphosulfate reductase family AM393_RS04855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS04855 PF10414 Sirohaem synthase dimerisation region AM393_RS04855 PF14824 Sirohaem biosynthesis protein central AM393_RS04860 PF04389 Peptidase family M28 AM393_RS04865 PF01507 Phosphoadenosine phosphosulfate reductase family AM393_RS04870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM393_RS04870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM393_RS04875 PF00175 Oxidoreductase NAD-binding domain AM393_RS04875 PF00258 Flavodoxin AM393_RS04875 PF00667 FAD binding domain AM393_RS04880 PF01242 6-pyruvoyl tetrahydropterin synthase AM393_RS04885 PF04055 Radical SAM superfamily AM393_RS04895 PF00113 Enolase, C-terminal TIM barrel domain AM393_RS04895 PF03952 Enolase, N-terminal domain AM393_RS04900 PF00117 Glutamine amidotransferase class-I AM393_RS04900 PF06418 CTP synthase N-terminus AM393_RS04905 PF03819 MazG nucleotide pyrophosphohydrolase domain AM393_RS04910 PF02824 TGS domain AM393_RS04910 PF04607 Region found in RelA / SpoT proteins AM393_RS04910 PF13291 ACT domain AM393_RS04915 PF05958 tRNA (Uracil-5-)-methyltransferase AM393_RS04915 PF01938 TRAM domain AM393_RS04920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM393_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS04920 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS04920 PF00672 HAMP domain AM393_RS04920 PF00072 Response regulator receiver domain AM393_RS04920 PF01627 Hpt domain AM393_RS04925 PF02595 Glycerate kinase family AM393_RS04930 PF13378 Enolase C-terminal domain-like AM393_RS04935 PF13378 Enolase C-terminal domain-like AM393_RS04935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM393_RS04940 PF07690 Major Facilitator Superfamily AM393_RS04945 PF00258 Flavodoxin AM393_RS04950 PF00849 RNA pseudouridylate synthase AM393_RS04955 PF04287 tRNA pseudouridine synthase C AM393_RS04960 PF07348 Syd protein (SUKH-2) AM393_RS04965 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM393_RS04965 PF14489 QueF-like protein AM393_RS04970 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM393_RS04970 PF11892 Domain of unknown function (DUF3412) AM393_RS04970 PF03641 Possible lysine decarboxylase AM393_RS04980 PF03313 Serine dehydratase alpha chain AM393_RS04980 PF03315 Serine dehydratase beta chain AM393_RS04985 PF09084 NMT1/THI5 like AM393_RS04995 PF07690 Major Facilitator Superfamily AM393_RS05005 PF03180 NLPA lipoprotein AM393_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS05015 PF00005 ABC transporter AM393_RS05020 PF00296 Luciferase-like monooxygenase AM393_RS05030 PF00296 Luciferase-like monooxygenase AM393_RS05035 PF00158 Sigma-54 interaction domain AM393_RS05040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM393_RS05040 PF01367 5'-3' exonuclease, C-terminal SAM fold AM393_RS05045 PF00465 Iron-containing alcohol dehydrogenase AM393_RS05050 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS05055 PF07690 Major Facilitator Superfamily AM393_RS05060 PF02952 L-fucose isomerase, C-terminal domain AM393_RS05060 PF07882 L-fucose isomerase, second N-terminal domain AM393_RS05060 PF07881 L-fucose isomerase, first N-terminal domain AM393_RS05065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS05065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS05070 PF05025 RbsD / FucU transport protein family AM393_RS05075 PF08220 DeoR-like helix-turn-helix domain AM393_RS05075 PF00455 DeoR C terminal sensor domain AM393_RS05080 PF18125 RlmM ferredoxin-like domain AM393_RS05080 PF01728 FtsJ-like methyltransferase AM393_RS05085 PF04241 Protein of unknown function (DUF423) AM393_RS05090 PF03466 LysR substrate binding domain AM393_RS05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS05095 PF06004 Bacterial protein of unknown function (DUF903) AM393_RS05100 PF00266 Aminotransferase class-V AM393_RS05105 PF02657 Fe-S metabolism associated domain AM393_RS05110 PF00899 ThiF family AM393_RS05115 PF03562 MltA specific insert domain AM393_RS05115 PF06725 3D domain AM393_RS05135 PF02277 Phosphoribosyltransferase AM393_RS05140 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM393_RS05145 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM393_RS05150 PF00005 ABC transporter AM393_RS05155 PF02361 Cobalt transport protein AM393_RS05160 PF02553 Cobalt transport protein component CbiN AM393_RS05165 PF01891 Cobalt uptake substrate-specific transmembrane region AM393_RS05170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS05175 PF06180 Cobalt chelatase (CbiK) AM393_RS05180 PF02571 Precorrin-6x reductase CbiJ/CobK AM393_RS05185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS05190 PF01890 Cobalamin synthesis G C-terminus AM393_RS05190 PF11760 Cobalamin synthesis G N-terminal AM393_RS05190 PF11761 Cobalamin biosynthesis central region AM393_RS05195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS05200 PF05175 Methyltransferase small domain AM393_RS05205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS05210 PF01888 CbiD AM393_RS05215 PF02570 Precorrin-8X methylmutase AM393_RS05220 PF03186 CobD/Cbib protein AM393_RS05225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM393_RS05225 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM393_RS05230 PF10114 Sensory domain found in PocR AM393_RS05230 PF12833 Helix-turn-helix domain AM393_RS05235 PF00230 Major intrinsic protein AM393_RS05240 PF00936 BMC domain AM393_RS05245 PF00936 BMC domain AM393_RS05250 PF02286 Dehydratase large subunit AM393_RS05255 PF02288 Dehydratase medium subunit AM393_RS05260 PF02287 Dehydratase small subunit AM393_RS05265 PF18427 DD-reactivating factor swiveling domain AM393_RS05265 PF08841 Diol dehydratase reactivase ATPase-like domain AM393_RS05275 PF00936 BMC domain AM393_RS05280 PF00936 BMC domain AM393_RS05285 PF06130 Phosphate propanoyltransferase AM393_RS05295 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM393_RS05300 PF01923 Cobalamin adenosyltransferase AM393_RS05305 PF00171 Aldehyde dehydrogenase family AM393_RS05310 PF00465 Iron-containing alcohol dehydrogenase AM393_RS05310 PF00171 Aldehyde dehydrogenase family AM393_RS05315 PF10531 SLBB domain AM393_RS05315 PF13375 RnfC Barrel sandwich hybrid domain AM393_RS05315 PF13237 4Fe-4S dicluster domain AM393_RS05315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM393_RS05325 PF00936 BMC domain AM393_RS05330 PF10662 Ethanolamine utilisation - propanediol utilisation AM393_RS05335 PF00871 Acetokinase family AM393_RS05340 PF00288 GHMP kinases N terminal domain AM393_RS05345 PF00155 Aminotransferase class I and II AM393_RS05350 PF01520 N-acetylmuramoyl-L-alanine amidase AM393_RS05350 PF11741 AMIN domain AM393_RS05355 PF00696 Amino acid kinase family AM393_RS05355 PF00583 Acetyltransferase (GNAT) family AM393_RS05365 PF13538 UvrD-like helicase C-terminal domain AM393_RS05370 PF13361 UvrD-like helicase C-terminal domain AM393_RS05370 PF00580 UvrD/REP helicase N-terminal domain AM393_RS05370 PF12705 PD-(D/E)XK nuclease superfamily AM393_RS05375 PF00675 Insulinase (Peptidase family M16) AM393_RS05375 PF05193 Peptidase M16 inactive domain AM393_RS05375 PF16187 Middle or third domain of peptidase_M16 AM393_RS05380 PF17946 RecC C-terminal domain AM393_RS05385 PF07963 Prokaryotic N-terminal methylation motif AM393_RS05385 PF12528 Type II secretion prepilin peptidase dependent protein C AM393_RS05390 PF10713 Protein of unknown function (DUF2509) AM393_RS05395 PF07963 Prokaryotic N-terminal methylation motif AM393_RS05400 PF07963 Prokaryotic N-terminal methylation motif AM393_RS05405 PF00303 Thymidylate synthase AM393_RS05410 PF01790 Prolipoprotein diacylglyceryl transferase AM393_RS05415 PF01590 GAF domain AM393_RS05415 PF02896 PEP-utilising enzyme, TIM barrel domain AM393_RS05415 PF05524 PEP-utilising enzyme, N-terminal AM393_RS05415 PF00391 PEP-utilising enzyme, mobile domain AM393_RS05420 PF00293 NUDIX domain AM393_RS05425 PF02976 DNA mismatch repair enzyme MutH AM393_RS05430 PF03741 Integral membrane protein TerC family AM393_RS05435 PF06004 Bacterial protein of unknown function (DUF903) AM393_RS05440 PF00248 Aldo/keto reductase family AM393_RS05445 PF07690 Major Facilitator Superfamily AM393_RS05450 PF00501 AMP-binding enzyme AM393_RS05450 PF01553 Acyltransferase AM393_RS05465 PF00356 Bacterial regulatory proteins, lacI family AM393_RS05475 PF00392 Bacterial regulatory proteins, gntR family AM393_RS05475 PF07729 FCD domain AM393_RS05480 PF00232 Glycosyl hydrolase family 1 AM393_RS05485 PF02378 Phosphotransferase system, EIIC AM393_RS05490 PF00356 Bacterial regulatory proteins, lacI family AM393_RS05495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM393_RS05495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM393_RS05500 PF03466 LysR substrate binding domain AM393_RS05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS05505 PF01177 Asp/Glu/Hydantoin racemase AM393_RS05510 PF16867 Dimethlysulfonioproprionate lyase AM393_RS05515 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS05520 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS05525 PF17912 MalK OB fold domain AM393_RS05525 PF00005 ABC transporter AM393_RS05540 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM393_RS05540 PF08244 Glycosyl hydrolases family 32 C terminal AM393_RS05545 PF01306 LacY proton/sugar symporter AM393_RS05550 PF00356 Bacterial regulatory proteins, lacI family AM393_RS05550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM393_RS05555 PF00083 Sugar (and other) transporter AM393_RS05565 PF14583 Oligogalacturonate lyase AM393_RS05570 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM393_RS05575 PF02803 Thiolase, C-terminal domain AM393_RS05575 PF00108 Thiolase, N-terminal domain AM393_RS05580 PF03466 LysR substrate binding domain AM393_RS05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS05590 PF03222 Tryptophan/tyrosine permease family AM393_RS05595 PF00248 Aldo/keto reductase family AM393_RS05605 PF00196 Bacterial regulatory proteins, luxR family AM393_RS05605 PF00072 Response regulator receiver domain AM393_RS05620 PF00419 Fimbrial protein AM393_RS05625 PF00577 Outer membrane usher protein AM393_RS05625 PF13953 PapC C-terminal domain AM393_RS05625 PF13954 PapC N-terminal domain AM393_RS05630 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS05630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS05635 PF00419 Fimbrial protein AM393_RS05645 PF00892 EamA-like transporter family AM393_RS05650 PF01047 MarR family AM393_RS05655 PF03824 High-affinity nickel-transport protein AM393_RS05670 PF00589 Phage integrase family AM393_RS05675 PF00589 Phage integrase family AM393_RS05680 PF00419 Fimbrial protein AM393_RS05685 PF00419 Fimbrial protein AM393_RS05690 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS05690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS05695 PF00577 Outer membrane usher protein AM393_RS05695 PF13954 PapC N-terminal domain AM393_RS05695 PF13953 PapC C-terminal domain AM393_RS05700 PF00419 Fimbrial protein AM393_RS05710 PF09160 FimH, mannose binding AM393_RS05710 PF00419 Fimbrial protein AM393_RS05720 PF14542 GCN5-related N-acetyl-transferase AM393_RS05725 PF06902 Divergent 4Fe-4S mono-cluster AM393_RS05730 PF17090 Uncharacterised protein family AM393_RS05735 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS05735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS05740 PF04632 Fusaric acid resistance protein family AM393_RS05745 PF02321 Outer membrane efflux protein AM393_RS05750 PF08986 Domain of unknown function (DUF1889) AM393_RS05755 PF00854 POT family AM393_RS05760 PF03960 ArsC family AM393_RS05765 PF02040 Arsenical pump membrane protein AM393_RS05770 PF01022 Bacterial regulatory protein, arsR family AM393_RS05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS05785 PF03466 LysR substrate binding domain AM393_RS05795 PF02525 Flavodoxin-like fold AM393_RS05800 PF00248 Aldo/keto reductase family AM393_RS05810 PF03466 LysR substrate binding domain AM393_RS05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS05815 PF07690 Major Facilitator Superfamily AM393_RS05825 PF01476 LysM domain AM393_RS05825 PF01551 Peptidase family M23 AM393_RS05835 PF00293 NUDIX domain AM393_RS05840 PF01336 OB-fold nucleic acid binding domain AM393_RS05840 PF00152 tRNA synthetases class II (D, K and N) AM393_RS05850 PF01368 DHH family AM393_RS05850 PF02272 DHHA1 domain AM393_RS05850 PF17768 RecJ OB domain AM393_RS05855 PF13098 Thioredoxin-like domain AM393_RS05855 PF10411 Disulfide bond isomerase protein N-terminus AM393_RS05860 PF02899 Phage integrase, N-terminal SAM-like domain AM393_RS05860 PF00589 Phage integrase family AM393_RS05865 PF00258 Flavodoxin AM393_RS05870 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM393_RS05875 PF03937 Flavinator of succinate dehydrogenase AM393_RS05880 PF01571 Aminomethyltransferase folate-binding domain AM393_RS05885 PF03006 Haemolysin-III related AM393_RS05890 PF04266 ASCH domain AM393_RS05895 PF01418 Helix-turn-helix domain, rpiR family AM393_RS05895 PF01380 SIS domain AM393_RS05900 PF00232 Glycosyl hydrolase family 1 AM393_RS05920 PF00578 AhpC/TSA family AM393_RS05930 PF02347 Glycine cleavage system P-protein AM393_RS05935 PF01597 Glycine cleavage H-protein AM393_RS05940 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM393_RS05940 PF01571 Aminomethyltransferase folate-binding domain AM393_RS05945 PF01494 FAD binding domain AM393_RS05950 PF01494 FAD binding domain AM393_RS05955 PF05195 Aminopeptidase P, N-terminal domain AM393_RS05955 PF00557 Metallopeptidase family M24 AM393_RS05960 PF03695 Uncharacterised protein family (UPF0149) AM393_RS05965 PF05164 Cell division protein ZapA AM393_RS05975 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM393_RS05980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM393_RS05980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS05980 PF01842 ACT domain AM393_RS05985 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM393_RS05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS05990 PF03466 LysR substrate binding domain AM393_RS05995 PF04402 Protein of unknown function (DUF541) AM393_RS06000 PF01810 LysE type translocator AM393_RS06005 PF00924 Mechanosensitive ion channel AM393_RS06005 PF05552 Conserved TM helix AM393_RS06010 PF01116 Fructose-bisphosphate aldolase class-II AM393_RS06015 PF00162 Phosphoglycerate kinase AM393_RS06020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM393_RS06020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM393_RS06025 PF02779 Transketolase, pyrimidine binding domain AM393_RS06025 PF02780 Transketolase, C-terminal domain AM393_RS06025 PF00456 Transketolase, thiamine diphosphate binding domain AM393_RS06030 PF01435 Peptidase family M48 AM393_RS06035 PF03573 outer membrane porin, OprD family AM393_RS06040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS06040 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS06040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS06045 PF00171 Aldehyde dehydrogenase family AM393_RS06050 PF03447 Homoserine dehydrogenase, NAD binding domain AM393_RS06050 PF01958 Domain of unknown function DUF108 AM393_RS06060 PF12697 Alpha/beta hydrolase family AM393_RS06075 PF14759 Reductase C-terminal AM393_RS06075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS06085 PF01614 Bacterial transcriptional regulator AM393_RS06085 PF09339 IclR helix-turn-helix domain AM393_RS06095 PF00355 Rieske [2Fe-2S] domain AM393_RS06105 PF00355 Rieske [2Fe-2S] domain AM393_RS06120 PF00491 Arginase family AM393_RS06125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM393_RS06125 PF17944 Arginine decarboxylase C-terminal helical extension AM393_RS06125 PF17810 Arginine decarboxylase helical bundle domain AM393_RS06145 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM393_RS06145 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM393_RS06145 PF02772 S-adenosylmethionine synthetase, central domain AM393_RS06150 PF00083 Sugar (and other) transporter AM393_RS06155 PF17283 SprT-like zinc ribbon domain AM393_RS06155 PF10263 SprT-like family AM393_RS06160 PF04231 Endonuclease I AM393_RS06165 PF04452 RNA methyltransferase AM393_RS06170 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM393_RS06170 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM393_RS06175 PF02622 Uncharacterized ACR, COG1678 AM393_RS06180 PF03652 Holliday junction resolvase AM393_RS06185 PF00196 Bacterial regulatory proteins, luxR family AM393_RS06190 PF00437 Type II/IV secretion system protein AM393_RS06195 PF01168 Alanine racemase, N-terminal domain AM393_RS06200 PF02325 YGGT family AM393_RS06205 PF02594 Uncharacterised ACR, YggU family COG1872 AM393_RS06210 PF01725 Ham1 family AM393_RS06215 PF04055 Radical SAM superfamily AM393_RS06215 PF06969 HemN C-terminal domain AM393_RS06220 PF11101 Protein of unknown function (DUF2884) AM393_RS06225 PF04320 Protein with unknown function (DUF469) AM393_RS06230 PF02390 Putative methyltransferase AM393_RS06235 PF00730 HhH-GPD superfamily base excision DNA repair protein AM393_RS06235 PF14815 NUDIX domain AM393_RS06235 PF10576 Iron-sulfur binding domain of endonuclease III AM393_RS06235 PF00633 Helix-hairpin-helix motif AM393_RS06240 PF04362 Bacterial Fe(2+) trafficking AM393_RS06245 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM393_RS06245 PF01464 Transglycosylase SLT domain AM393_RS06250 PF03825 Nucleoside H+ symporter AM393_RS06255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM393_RS06255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM393_RS06255 PF01276 Orn/Lys/Arg decarboxylase, major domain AM393_RS06265 PF04474 Protein of unknown function (DUF554) AM393_RS06275 PF00589 Phage integrase family AM393_RS06285 PF18818 Metallopeptidase superfamily domain AM393_RS06285 PF13362 Toprim domain AM393_RS06285 PF08401 Domain of unknown function (DUF1738) AM393_RS06300 PF03230 Antirestriction protein AM393_RS06335 PF13693 Winged helix-turn-helix DNA-binding AM393_RS06340 PF00313 'Cold-shock' DNA-binding domain AM393_RS06350 PF13693 Winged helix-turn-helix DNA-binding AM393_RS06415 PF13737 Transposase DDE domain AM393_RS06565 PF03796 DnaB-like helicase C terminal domain AM393_RS06565 PF00772 DnaB-like helicase N terminal domain AM393_RS06575 PF13614 AAA domain AM393_RS06605 PF00571 CBS domain AM393_RS06605 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS06610 PF01053 Cys/Met metabolism PLP-dependent enzyme AM393_RS06615 PF03466 LysR substrate binding domain AM393_RS06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS06635 PF00155 Aminotransferase class I and II AM393_RS06640 PF03738 Glutathionylspermidine synthase preATP-grasp AM393_RS06640 PF05257 CHAP domain AM393_RS06650 PF02798 Glutathione S-transferase, N-terminal domain AM393_RS06655 PF11115 Protein of unknown function (DUF2623) AM393_RS06660 PF01738 Dienelactone hydrolase family AM393_RS06665 PF03350 Uncharacterized protein family, UPF0114 AM393_RS06670 PF04616 Glycosyl hydrolases family 43 AM393_RS06670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AM393_RS06680 PF02472 Biopolymer transport protein ExbD/TolR AM393_RS06685 PF01618 MotA/TolQ/ExbB proton channel family AM393_RS06695 PF01053 Cys/Met metabolism PLP-dependent enzyme AM393_RS06700 PF09335 SNARE associated Golgi protein AM393_RS06705 PF12833 Helix-turn-helix domain AM393_RS06705 PF06719 AraC-type transcriptional regulator N-terminus AM393_RS06710 PF00465 Iron-containing alcohol dehydrogenase AM393_RS06715 PF00248 Aldo/keto reductase family AM393_RS06725 PF11842 Domain of unknown function (DUF3362) AM393_RS06725 PF08497 Radical SAM N-terminal AM393_RS06725 PF04055 Radical SAM superfamily AM393_RS06730 PF00394 Multicopper oxidase AM393_RS06730 PF07731 Multicopper oxidase AM393_RS06730 PF07732 Multicopper oxidase AM393_RS06735 PF01553 Acyltransferase AM393_RS06740 PF00521 DNA gyrase/topoisomerase IV, subunit A AM393_RS06740 PF03989 DNA gyrase C-terminal domain, beta-propeller AM393_RS06745 PF06445 GyrI-like small molecule binding domain AM393_RS06750 PF04076 Bacterial OB fold (BOF) protein AM393_RS06755 PF00072 Response regulator receiver domain AM393_RS06755 PF00486 Transcriptional regulatory protein, C terminal AM393_RS06760 PF08521 Two-component sensor kinase N-terminal AM393_RS06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS06760 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS06765 PF02525 Flavodoxin-like fold AM393_RS06770 PF03992 Antibiotic biosynthesis monooxygenase AM393_RS06775 PF00204 DNA gyrase B AM393_RS06775 PF01751 Toprim domain AM393_RS06775 PF00986 DNA gyrase B subunit, carboxyl terminus AM393_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS06780 PF05728 Uncharacterised protein family (UPF0227) AM393_RS06785 PF00149 Calcineurin-like phosphoesterase AM393_RS06790 PF06853 Protein of unknown function (DUF1249) AM393_RS06795 PF00293 NUDIX domain AM393_RS06800 PF02321 Outer membrane efflux protein AM393_RS06805 PF06693 Protein of unknown function (DUF1190) AM393_RS06810 PF03738 Glutathionylspermidine synthase preATP-grasp AM393_RS06815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM393_RS06820 PF02535 ZIP Zinc transporter AM393_RS06825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM393_RS06830 PF04380 Membrane fusogenic activity AM393_RS06835 PF08971 Glycogen synthesis protein AM393_RS06840 PF01467 Cytidylyltransferase-like AM393_RS06840 PF00294 pfkB family carbohydrate kinase AM393_RS06845 PF08335 GlnD PII-uridylyltransferase AM393_RS06845 PF03710 Glutamate-ammonia ligase adenylyltransferase AM393_RS06850 PF01928 CYTH domain AM393_RS06855 PF08239 Bacterial SH3 domain AM393_RS06860 PF01966 HD domain AM393_RS06860 PF01743 Poly A polymerase head domain AM393_RS06860 PF12627 Probable RNA and SrmB- binding site of polymerase A AM393_RS06865 PF02673 Bacitracin resistance protein BacA AM393_RS06870 PF02152 Dihydroneopterin aldolase AM393_RS06875 PF02660 Glycerol-3-phosphate acyltransferase AM393_RS06885 PF01774 UreD urease accessory protein AM393_RS06890 PF00547 Urease, gamma subunit AM393_RS06895 PF00699 Urease beta subunit AM393_RS06900 PF01979 Amidohydrolase family AM393_RS06900 PF00449 Urease alpha-subunit, N-terminal domain AM393_RS06905 PF02814 UreE urease accessory protein, N-terminal domain AM393_RS06905 PF05194 UreE urease accessory protein, C-terminal domain AM393_RS06910 PF01730 UreF AM393_RS06915 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM393_RS06925 PF00814 Glycoprotease family AM393_RS06935 PF01165 Ribosomal protein S21 AM393_RS06940 PF10410 DnaB-helicase binding domain of primase AM393_RS06940 PF08278 DNA primase DnaG DnaB-binding AM393_RS06940 PF08275 DNA primase catalytic core, N-terminal domain AM393_RS06940 PF01807 CHC2 zinc finger AM393_RS06945 PF04539 Sigma-70 region 3 AM393_RS06945 PF04545 Sigma-70, region 4 AM393_RS06945 PF04542 Sigma-70 region 2 AM393_RS06945 PF00140 Sigma-70 factor, region 1.2 AM393_RS06945 PF03979 Sigma-70 factor, region 1.1 AM393_RS06945 PF04546 Sigma-70, non-essential region AM393_RS06950 PF03167 Uracil DNA glycosylase superfamily AM393_RS06970 PF00196 Bacterial regulatory proteins, luxR family AM393_RS06970 PF00072 Response regulator receiver domain AM393_RS06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS06975 PF00072 Response regulator receiver domain AM393_RS06975 PF01627 Hpt domain AM393_RS06975 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS06980 PF10938 YfdX protein AM393_RS06985 PF03729 Short repeat of unknown function (DUF308) AM393_RS06990 PF06411 HdeA/HdeB family AM393_RS06995 PF00230 Major intrinsic protein AM393_RS07000 PF08841 Diol dehydratase reactivase ATPase-like domain AM393_RS07000 PF18427 DD-reactivating factor swiveling domain AM393_RS07005 PF02287 Dehydratase small subunit AM393_RS07010 PF02288 Dehydratase medium subunit AM393_RS07015 PF02286 Dehydratase large subunit AM393_RS07020 PF03928 Haem-degrading AM393_RS07025 PF00465 Iron-containing alcohol dehydrogenase AM393_RS07030 PF02288 Dehydratase medium subunit AM393_RS07035 PF01923 Cobalamin adenosyltransferase AM393_RS07040 PF02954 Bacterial regulatory protein, Fis family AM393_RS07040 PF00989 PAS fold AM393_RS07040 PF00158 Sigma-54 interaction domain AM393_RS07045 PF00465 Iron-containing alcohol dehydrogenase AM393_RS07065 PF02733 Dak1 domain AM393_RS07070 PF02734 DAK2 domain AM393_RS07075 PF00391 PEP-utilising enzyme, mobile domain AM393_RS07075 PF05524 PEP-utilising enzyme, N-terminal AM393_RS07075 PF00381 PTS HPr component phosphorylation site AM393_RS07075 PF03610 PTS system fructose IIA component AM393_RS07080 PF02733 Dak1 domain AM393_RS07080 PF02734 DAK2 domain AM393_RS07085 PF04954 Siderophore-interacting protein AM393_RS07085 PF08021 Siderophore-interacting FAD-binding domain AM393_RS07090 PF03551 Transcriptional regulator PadR-like family AM393_RS07100 PF00202 Aminotransferase class-III AM393_RS07105 PF03992 Antibiotic biosynthesis monooxygenase AM393_RS07110 PF01791 DeoC/LacD family aldolase AM393_RS07115 PF13407 Periplasmic binding protein domain AM393_RS07120 PF02653 Branched-chain amino acid transport system / permease component AM393_RS07125 PF02653 Branched-chain amino acid transport system / permease component AM393_RS07130 PF00005 ABC transporter AM393_RS07135 PF04198 Putative sugar-binding domain AM393_RS07140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS07140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS07145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS07145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM393_RS07150 PF05175 Methyltransferase small domain AM393_RS07165 PF01863 Protein of unknown function DUF45 AM393_RS07170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS07175 PF03741 Integral membrane protein TerC family AM393_RS07180 PF00375 Sodium:dicarboxylate symporter family AM393_RS07185 PF10688 Bacterial inner membrane protein AM393_RS07190 PF08666 SAF domain AM393_RS07190 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM393_RS07195 PF02614 Glucuronate isomerase AM393_RS07200 PF07690 Major Facilitator Superfamily AM393_RS07205 PF00392 Bacterial regulatory proteins, gntR family AM393_RS07205 PF07729 FCD domain AM393_RS07210 PF09335 SNARE associated Golgi protein AM393_RS07215 PF13721 SecD export protein N-terminal TM region AM393_RS07220 PF06476 Protein of unknown function (DUF1090) AM393_RS07225 PF05957 Bacterial protein of unknown function (DUF883) AM393_RS07230 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM393_RS07235 PF13997 YqjK-like protein AM393_RS07240 PF07681 DoxX AM393_RS07245 PF13409 Glutathione S-transferase, N-terminal domain AM393_RS07250 PF05656 Protein of unknown function (DUF805) AM393_RS07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS07255 PF03466 LysR substrate binding domain AM393_RS07260 PF17954 Quercetinase C-terminal cupin domain AM393_RS07260 PF02678 Pirin AM393_RS07280 PF02595 Glycerate kinase family AM393_RS07285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM393_RS07285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM393_RS07290 PF03328 HpcH/HpaI aldolase/citrate lyase family AM393_RS07295 PF07690 Major Facilitator Superfamily AM393_RS07300 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM393_RS07300 PF08666 SAF domain AM393_RS07305 PF00294 pfkB family carbohydrate kinase AM393_RS07310 PF08220 DeoR-like helix-turn-helix domain AM393_RS07310 PF00455 DeoR C terminal sensor domain AM393_RS07315 PF01116 Fructose-bisphosphate aldolase class-II AM393_RS07320 PF00294 pfkB family carbohydrate kinase AM393_RS07325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS07325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS07330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS07330 PF00381 PTS HPr component phosphorylation site AM393_RS07335 PF08013 Tagatose 6 phosphate kinase AM393_RS07340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS07345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS07350 PF03611 PTS system sugar-specific permease component AM393_RS07355 PF00107 Zinc-binding dehydrogenase AM393_RS07355 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS07360 PF08220 DeoR-like helix-turn-helix domain AM393_RS07365 PF02661 Fic/DOC family AM393_RS07365 PF13784 Fic/DOC family N-terminal AM393_RS07370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS07375 PF04348 LppC putative lipoprotein AM393_RS07380 PF02021 Uncharacterised protein family UPF0102 AM393_RS07385 PF13580 SIS domain AM393_RS07390 PF04972 BON domain AM393_RS07395 PF03773 Predicted permease AM393_RS07400 PF13460 NAD(P)H-binding AM393_RS07405 PF01965 DJ-1/PfpI family AM393_RS07415 PF01541 GIY-YIG catalytic domain AM393_RS07420 PF13508 Acetyltransferase (GNAT) domain AM393_RS07425 PF02036 SCP-2 sterol transfer family AM393_RS07430 PF01136 Peptidase family U32 AM393_RS07435 PF01136 Peptidase family U32 AM393_RS07440 PF00296 Luciferase-like monooxygenase AM393_RS07445 PF03222 Tryptophan/tyrosine permease family AM393_RS07450 PF00271 Helicase conserved C-terminal domain AM393_RS07450 PF12343 Cold shock protein DEAD box A AM393_RS07450 PF00270 DEAD/DEAH box helicase AM393_RS07450 PF03880 DbpA RNA binding domain AM393_RS07460 PF07719 Tetratricopeptide repeat AM393_RS07460 PF13181 Tetratricopeptide repeat AM393_RS07465 PF03725 3' exoribonuclease family, domain 2 AM393_RS07465 PF01138 3' exoribonuclease family, domain 1 AM393_RS07465 PF00575 S1 RNA binding domain AM393_RS07465 PF00013 KH domain AM393_RS07465 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM393_RS07475 PF00312 Ribosomal protein S15 AM393_RS07480 PF09157 Pseudouridine synthase II TruB, C-terminal AM393_RS07480 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM393_RS07480 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM393_RS07485 PF02033 Ribosome-binding factor A AM393_RS07490 PF08364 Bacterial translation initiation factor IF-2 associated region AM393_RS07490 PF04760 Translation initiation factor IF-2, N-terminal region AM393_RS07490 PF11987 Translation-initiation factor 2 AM393_RS07490 PF00009 Elongation factor Tu GTP binding domain AM393_RS07495 PF00575 S1 RNA binding domain AM393_RS07495 PF08529 NusA N-terminal domain AM393_RS07495 PF13184 NusA-like KH domain AM393_RS07500 PF17384 RimP C-terminal SH3 domain AM393_RS07500 PF02576 RimP N-terminal domain AM393_RS07510 PF00764 Arginosuccinate synthase AM393_RS07515 PF15977 Winged helix-turn-helix DNA binding AM393_RS07520 PF07437 YfaZ precursor AM393_RS07535 PF03840 Preprotein translocase SecG subunit AM393_RS07540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM393_RS07540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM393_RS07540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM393_RS07540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM393_RS07545 PF00809 Pterin binding enzyme AM393_RS07550 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS07550 PF17862 AAA+ lid domain AM393_RS07550 PF06480 FtsH Extracellular AM393_RS07550 PF01434 Peptidase family M41 AM393_RS07555 PF01728 FtsJ-like methyltransferase AM393_RS07565 PF01985 CRS1 / YhbY (CRM) domain AM393_RS07570 PF03449 Transcription elongation factor, N-terminal AM393_RS07570 PF01272 Transcription elongation factor, GreA/GreB, C-term AM393_RS07575 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM393_RS07580 PF01018 GTP1/OBG AM393_RS07580 PF01926 50S ribosome-binding GTPase AM393_RS07585 PF00892 EamA-like transporter family AM393_RS07590 PF01016 Ribosomal L27 protein AM393_RS07595 PF00829 Ribosomal prokaryotic L21 protein AM393_RS07600 PF00348 Polyprenyl synthetase AM393_RS07605 PF13693 Winged helix-turn-helix DNA-binding AM393_RS07610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM393_RS07615 PF01722 BolA-like protein AM393_RS07620 PF13466 STAS domain AM393_RS07625 PF05494 MlaC protein AM393_RS07630 PF02470 MlaD protein AM393_RS07635 PF02405 Permease MlaE AM393_RS07640 PF00005 ABC transporter AM393_RS07650 PF01699 Sodium/calcium exchanger protein AM393_RS07655 PF01380 SIS domain AM393_RS07655 PF00571 CBS domain AM393_RS07665 PF06835 Lipopolysaccharide-assembly, LptC-related AM393_RS07670 PF03968 OstA-like protein AM393_RS07675 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM393_RS07675 PF00005 ABC transporter AM393_RS07680 PF04552 Sigma-54, DNA binding domain AM393_RS07680 PF04963 Sigma-54 factor, core binding domain AM393_RS07680 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM393_RS07685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM393_RS07690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS07695 PF03668 P-loop ATPase protein family AM393_RS07700 PF00381 PTS HPr component phosphorylation site AM393_RS07705 PF00912 Transglycosylase AM393_RS07715 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS07715 PF01627 Hpt domain AM393_RS07715 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM393_RS07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS07715 PF00072 Response regulator receiver domain AM393_RS07715 PF00989 PAS fold AM393_RS07720 PF03786 D-mannonate dehydratase (UxuA) AM393_RS07725 PF00107 Zinc-binding dehydrogenase AM393_RS07725 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS07730 PF07690 Major Facilitator Superfamily AM393_RS07735 PF04055 Radical SAM superfamily AM393_RS07735 PF16199 Radical_SAM C-terminal domain AM393_RS07745 PF01493 GXGXG motif AM393_RS07745 PF01645 Conserved region in glutamate synthase AM393_RS07745 PF04898 Glutamate synthase central domain AM393_RS07745 PF00310 Glutamine amidotransferases class-II AM393_RS07750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS07750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM393_RS07755 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM393_RS07760 PF04386 Stringent starvation protein B AM393_RS07765 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS07765 PF02798 Glutathione S-transferase, N-terminal domain AM393_RS07775 PF00380 Ribosomal protein S9/S16 AM393_RS07780 PF00572 Ribosomal protein L13 AM393_RS07785 PF03969 AFG1-like ATPase AM393_RS07790 PF06295 Protein of unknown function (DUF1043) AM393_RS07795 PF13180 PDZ domain AM393_RS07795 PF00595 PDZ domain AM393_RS07800 PF13180 PDZ domain AM393_RS07805 PF00056 lactate/malate dehydrogenase, NAD binding domain AM393_RS07805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM393_RS07810 PF02863 Arginine repressor, C-terminal domain AM393_RS07810 PF01316 Arginine repressor, DNA binding domain AM393_RS07815 PF07338 Protein of unknown function (DUF1471) AM393_RS07820 PF07338 Protein of unknown function (DUF1471) AM393_RS07825 PF01337 Barstar (barnase inhibitor) AM393_RS07830 PF04632 Fusaric acid resistance protein family AM393_RS07835 PF13533 Biotin-lipoyl like AM393_RS07840 PF07869 Protein of unknown function (DUF1656) AM393_RS07845 PF03466 LysR substrate binding domain AM393_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS07850 PF01523 Putative modulator of DNA gyrase AM393_RS07855 PF13116 Protein of unknown function AM393_RS07855 PF13502 AsmA-like C-terminal region AM393_RS07860 PF10150 Ribonuclease E/G family AM393_RS07860 PF00575 S1 RNA binding domain AM393_RS07865 PF02545 Maf-like protein AM393_RS07870 PF04093 rod shape-determining protein MreD AM393_RS07875 PF04085 rod shape-determining protein MreC AM393_RS07890 PF17157 Gammaproteobacterial periplasmic sensor domain AM393_RS07890 PF00563 EAL domain AM393_RS07890 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS07900 PF00174 Oxidoreductase molybdopterin binding domain AM393_RS07905 PF01794 Ferric reductase like transmembrane component AM393_RS07910 PF01220 Dehydroquinase class II AM393_RS07920 PF00364 Biotin-requiring enzyme AM393_RS07925 PF00289 Biotin carboxylase, N-terminal domain AM393_RS07925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM393_RS07925 PF02785 Biotin carboxylase C-terminal domain AM393_RS07930 PF06196 Protein of unknown function (DUF997) AM393_RS07935 PF00474 Sodium:solute symporter family AM393_RS07950 PF01207 Dihydrouridine synthase (Dus) AM393_RS07955 PF02954 Bacterial regulatory protein, Fis family AM393_RS07965 PF03354 Phage Terminase AM393_RS08055 PF10548 P22AR C-terminal domain AM393_RS08055 PF08346 AntA/AntB antirepressor AM393_RS08070 PF00589 Phage integrase family AM393_RS08070 PF14659 Phage integrase, N-terminal SAM-like domain AM393_RS08070 PF13356 Arm DNA-binding domain AM393_RS08075 PF00440 Bacterial regulatory proteins, tetR family AM393_RS08075 PF08361 MAATS-type transcriptional repressor, C-terminal region AM393_RS08080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS08080 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS08085 PF00873 AcrB/AcrD/AcrF family AM393_RS08120 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS08125 PF07369 Protein of unknown function (DUF1488) AM393_RS08130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM393_RS08130 PF08501 Shikimate dehydrogenase substrate binding domain AM393_RS08130 PF01488 Shikimate / quinate 5-dehydrogenase AM393_RS08135 PF01300 Telomere recombination AM393_RS08140 PF01396 Topoisomerase DNA binding C4 zinc finger AM393_RS08145 PF04361 Protein of unknown function (DUF494) AM393_RS08150 PF17782 DprA winged helix domain AM393_RS08150 PF02481 DNA recombination-mediator protein A AM393_RS08155 PF01327 Polypeptide deformylase AM393_RS08160 PF02911 Formyl transferase, C-terminal domain AM393_RS08160 PF00551 Formyl transferase AM393_RS08165 PF01189 16S rRNA methyltransferase RsmB/F AM393_RS08165 PF01029 NusB family AM393_RS08170 PF02254 TrkA-N domain AM393_RS08170 PF02080 TrkA-C domain AM393_RS08175 PF01741 Large-conductance mechanosensitive channel, MscL AM393_RS08180 PF03889 Alternative ribosome-rescue factor A AM393_RS08185 PF13411 MerR HTH family regulatory protein AM393_RS08190 PF09350 Domain of unknown function (DUF1992) AM393_RS08195 PF01196 Ribosomal protein L17 AM393_RS08200 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM393_RS08200 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM393_RS08200 PF01000 RNA polymerase Rpb3/RpoA insert domain AM393_RS08205 PF00163 Ribosomal protein S4/S9 N-terminal domain AM393_RS08205 PF01479 S4 domain AM393_RS08210 PF00411 Ribosomal protein S11 AM393_RS08215 PF00416 Ribosomal protein S13/S18 AM393_RS08220 PF00444 Ribosomal protein L36 AM393_RS08225 PF00344 SecY translocase AM393_RS08230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM393_RS08235 PF00327 Ribosomal protein L30p/L7e AM393_RS08240 PF00333 Ribosomal protein S5, N-terminal domain AM393_RS08240 PF03719 Ribosomal protein S5, C-terminal domain AM393_RS08245 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM393_RS08250 PF00347 Ribosomal protein L6 AM393_RS08255 PF00410 Ribosomal protein S8 AM393_RS08260 PF00253 Ribosomal protein S14p/S29e AM393_RS08265 PF00673 ribosomal L5P family C-terminus AM393_RS08265 PF00281 Ribosomal protein L5 AM393_RS08270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM393_RS08270 PF00467 KOW motif AM393_RS08275 PF00238 Ribosomal protein L14p/L23e AM393_RS08280 PF00366 Ribosomal protein S17 AM393_RS08285 PF00831 Ribosomal L29 protein AM393_RS08290 PF00252 Ribosomal protein L16p/L10e AM393_RS08295 PF00189 Ribosomal protein S3, C-terminal domain AM393_RS08295 PF07650 KH domain AM393_RS08300 PF00237 Ribosomal protein L22p/L17e AM393_RS08305 PF00203 Ribosomal protein S19 AM393_RS08310 PF00181 Ribosomal Proteins L2, RNA binding domain AM393_RS08310 PF03947 Ribosomal Proteins L2, C-terminal domain AM393_RS08315 PF00276 Ribosomal protein L23 AM393_RS08320 PF00573 Ribosomal protein L4/L1 family AM393_RS08325 PF00297 Ribosomal protein L3 AM393_RS08330 PF00338 Ribosomal protein S10p/S20e AM393_RS08335 PF01478 Type IV leader peptidase family AM393_RS08340 PF00210 Ferritin-like domain AM393_RS08345 PF04324 BFD-like [2Fe-2S] binding domain AM393_RS08355 PF03143 Elongation factor Tu C-terminal domain AM393_RS08355 PF00009 Elongation factor Tu GTP binding domain AM393_RS08355 PF03144 Elongation factor Tu domain 2 AM393_RS08360 PF03144 Elongation factor Tu domain 2 AM393_RS08360 PF14492 Elongation Factor G, domain II AM393_RS08360 PF00679 Elongation factor G C-terminus AM393_RS08360 PF03764 Elongation factor G, domain IV AM393_RS08360 PF00009 Elongation factor Tu GTP binding domain AM393_RS08365 PF00177 Ribosomal protein S7p/S5e AM393_RS08370 PF00164 Ribosomal protein S12/S23 AM393_RS08375 PF04077 DsrH like protein AM393_RS08380 PF02635 DsrE/DsrF-like family AM393_RS08385 PF02635 DsrE/DsrF-like family AM393_RS08390 PF08348 YheO-like PAS domain AM393_RS08390 PF13309 HTH domain AM393_RS08395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM393_RS08395 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM393_RS08400 PF04102 SlyX AM393_RS08405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM393_RS08410 PF09526 Probable metal-binding protein (DUF2387) AM393_RS08415 PF00999 Sodium/hydrogen exchanger family AM393_RS08415 PF02254 TrkA-N domain AM393_RS08420 PF02525 Flavodoxin-like fold AM393_RS08425 PF12848 ABC transporter AM393_RS08425 PF00005 ABC transporter AM393_RS08435 PF00561 alpha/beta hydrolase fold AM393_RS08440 PF06794 Uncharacterised protein family (UPF0270) AM393_RS08445 PF00485 Phosphoribulokinase / Uridine kinase family AM393_RS08450 PF02566 OsmC-like protein AM393_RS08460 PF00027 Cyclic nucleotide-binding domain AM393_RS08460 PF13545 Crp-like helix-turn-helix domain AM393_RS08465 PF12805 FUSC-like inner membrane protein yccS AM393_RS08470 PF00202 Aminotransferase class-III AM393_RS08475 PF00117 Glutamine amidotransferase class-I AM393_RS08480 PF02661 Fic/DOC family AM393_RS08485 PF10832 Protein of unknown function (DUF2559) AM393_RS08490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM393_RS08495 PF07690 Major Facilitator Superfamily AM393_RS08500 PF07969 Amidohydrolase family AM393_RS08505 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM393_RS08505 PF04324 BFD-like [2Fe-2S] binding domain AM393_RS08505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM393_RS08505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS08505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM393_RS08510 PF13806 Rieske-like [2Fe-2S] domain AM393_RS08515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM393_RS08515 PF10414 Sirohaem synthase dimerisation region AM393_RS08515 PF14824 Sirohaem biosynthesis protein central AM393_RS08520 PF00579 tRNA synthetases class I (W and Y) AM393_RS08525 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS08530 PF00834 Ribulose-phosphate 3 epimerase family AM393_RS08535 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM393_RS08540 PF05036 Sporulation related domain AM393_RS08545 PF01761 3-dehydroquinate synthase AM393_RS08550 PF01202 Shikimate kinase AM393_RS08560 PF00263 Bacterial type II and III secretion system protein AM393_RS08560 PF03958 Bacterial type II/III secretion system short domain AM393_RS08585 PF17092 Penicillin-binding protein OB-like domain AM393_RS08585 PF00912 Transglycosylase AM393_RS08585 PF00905 Penicillin binding protein transpeptidase domain AM393_RS08590 PF00293 NUDIX domain AM393_RS08595 PF07095 Intracellular growth attenuator protein IgaA AM393_RS08600 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS08605 PF01479 S4 domain AM393_RS08610 PF01430 Hsp33 protein AM393_RS08615 PF01293 Phosphoenolpyruvate carboxykinase AM393_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS08620 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS08620 PF00672 HAMP domain AM393_RS08625 PF00486 Transcriptional regulatory protein, C terminal AM393_RS08625 PF00072 Response regulator receiver domain AM393_RS08630 PF01272 Transcription elongation factor, GreA/GreB, C-term AM393_RS08630 PF03449 Transcription elongation factor, N-terminal AM393_RS08635 PF16921 Tex protein YqgF-like domain AM393_RS08635 PF17674 HHH domain AM393_RS08635 PF00575 S1 RNA binding domain AM393_RS08635 PF09371 Tex-like protein N-terminal domain AM393_RS08640 PF04023 FeoA domain AM393_RS08645 PF07670 Nucleoside recognition AM393_RS08645 PF02421 Ferrous iron transport protein B AM393_RS08645 PF17910 FeoB cytosolic helical domain AM393_RS08645 PF07664 Ferrous iron transport protein B C terminus AM393_RS08650 PF09012 FeoC like transcriptional regulator AM393_RS08660 PF00561 alpha/beta hydrolase fold AM393_RS08665 PF00156 Phosphoribosyl transferase domain AM393_RS08670 PF01521 Iron-sulphur cluster biosynthesis AM393_RS08670 PF01106 NifU-like domain AM393_RS08675 PF02447 GntP family permease AM393_RS08680 PF02446 4-alpha-glucanotransferase AM393_RS08685 PF00343 Carbohydrate phosphorylase AM393_RS08695 PF17874 MalT-like TPR region AM393_RS08695 PF00196 Bacterial regulatory proteins, luxR family AM393_RS08700 PF00455 DeoR C terminal sensor domain AM393_RS08700 PF08220 DeoR-like helix-turn-helix domain AM393_RS08705 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM393_RS08705 PF01694 Rhomboid family AM393_RS08710 PF00581 Rhodanese-like domain AM393_RS08715 PF01266 FAD dependent oxidoreductase AM393_RS08715 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM393_RS08730 PF00343 Carbohydrate phosphorylase AM393_RS08735 PF00534 Glycosyl transferases group 1 AM393_RS08735 PF08323 Starch synthase catalytic domain AM393_RS08740 PF00483 Nucleotidyl transferase AM393_RS08745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM393_RS08745 PF00128 Alpha amylase, catalytic domain AM393_RS08745 PF18390 Glycogen debranching enzyme C-terminal domain AM393_RS08750 PF02806 Alpha amylase, C-terminal all-beta domain AM393_RS08750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM393_RS08750 PF00128 Alpha amylase, catalytic domain AM393_RS08755 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM393_RS08755 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM393_RS08765 PF02447 GntP family permease AM393_RS08770 PF01202 Shikimate kinase AM393_RS08775 PF00356 Bacterial regulatory proteins, lacI family AM393_RS08775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM393_RS08780 PF02678 Pirin AM393_RS08780 PF17954 Quercetinase C-terminal cupin domain AM393_RS08785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS08785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS08800 PF00583 Acetyltransferase (GNAT) family AM393_RS08810 PF10956 Protein of unknown function (DUF2756) AM393_RS08815 PF03009 Glycerophosphoryl diester phosphodiesterase family AM393_RS08820 PF00005 ABC transporter AM393_RS08820 PF17912 MalK OB fold domain AM393_RS08825 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS08830 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS08835 PF13416 Bacterial extracellular solute-binding protein AM393_RS08845 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM393_RS08850 PF00005 ABC transporter AM393_RS08855 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM393_RS08855 PF00005 ABC transporter AM393_RS08860 PF02653 Branched-chain amino acid transport system / permease component AM393_RS08860 PF11862 Domain of unknown function (DUF3382) AM393_RS08865 PF02653 Branched-chain amino acid transport system / permease component AM393_RS08870 PF13458 Periplasmic binding protein AM393_RS08875 PF12568 Acetyltransferase (GNAT) domain, PanZ AM393_RS08880 PF13458 Periplasmic binding protein AM393_RS08890 PF00202 Aminotransferase class-III AM393_RS08895 PF00155 Aminotransferase class I and II AM393_RS08895 PF00392 Bacterial regulatory proteins, gntR family AM393_RS08900 PF04545 Sigma-70, region 4 AM393_RS08900 PF04542 Sigma-70 region 2 AM393_RS08905 PF02687 FtsX-like permease family AM393_RS08905 PF18075 FtsX extracellular domain AM393_RS08910 PF00005 ABC transporter AM393_RS08915 PF00448 SRP54-type protein, GTPase domain AM393_RS08915 PF02881 SRP54-type protein, helical bundle domain AM393_RS08925 PF06611 Protein of unknown function (DUF1145) AM393_RS08930 PF10694 Protein of unknown function (DUF2500) AM393_RS08935 PF07947 YhhN family AM393_RS08940 PF00403 Heavy-metal-associated domain AM393_RS08945 PF01206 Sulfurtransferase TusA AM393_RS08950 PF02592 Putative vitamin uptake transporter AM393_RS08955 PF08786 DcrB AM393_RS08960 PF07690 Major Facilitator Superfamily AM393_RS08965 PF01594 AI-2E family transporter AM393_RS08975 PF00892 EamA-like transporter family AM393_RS08980 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM393_RS08985 PF01522 Polysaccharide deacetylase AM393_RS08990 PF01370 NAD dependent epimerase/dehydratase family AM393_RS08990 PF02911 Formyl transferase, C-terminal domain AM393_RS08990 PF00551 Formyl transferase AM393_RS08995 PF00535 Glycosyl transferase family 2 AM393_RS09000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM393_RS09005 PF05870 Phenolic acid decarboxylase (PAD) AM393_RS09010 PF03466 LysR substrate binding domain AM393_RS09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS09015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS09020 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS09025 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS09030 PF00005 ABC transporter AM393_RS09035 PF00005 ABC transporter AM393_RS09040 PF01402 Ribbon-helix-helix protein, copG family AM393_RS09040 PF08753 NikR C terminal nickel binding domain AM393_RS09045 PF01769 Divalent cation transporter AM393_RS09045 PF03448 MgtE intracellular N domain AM393_RS09045 PF00571 CBS domain AM393_RS09055 PF01384 Phosphate transporter family AM393_RS09060 PF10625 Universal stress protein B (UspB) AM393_RS09065 PF00582 Universal stress protein family AM393_RS09070 PF00854 POT family AM393_RS09075 PF04445 Putative SAM-dependent methyltransferase AM393_RS09080 PF01432 Peptidase family M3 AM393_RS09085 PF01569 PAP2 superfamily AM393_RS09090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM393_RS09095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM393_RS09095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS09105 PF00465 Iron-containing alcohol dehydrogenase AM393_RS09110 PF01204 Trehalase AM393_RS09115 PF13302 Acetyltransferase (GNAT) domain AM393_RS09125 PF03466 LysR substrate binding domain AM393_RS09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS09130 PF03631 Virulence factor BrkB AM393_RS09135 PF07690 Major Facilitator Superfamily AM393_RS09135 PF00083 Sugar (and other) transporter AM393_RS09140 PF05170 AsmA family AM393_RS09150 PF00294 pfkB family carbohydrate kinase AM393_RS09155 PF00675 Insulinase (Peptidase family M16) AM393_RS09155 PF05193 Peptidase M16 inactive domain AM393_RS09160 PF00375 Sodium:dicarboxylate symporter family AM393_RS09165 PF00563 EAL domain AM393_RS09165 PF17154 Gammaproteobacterial periplasmic sensor domain AM393_RS09165 PF00672 HAMP domain AM393_RS09165 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS09170 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM393_RS09175 PF01270 Glycosyl hydrolases family 8 AM393_RS09180 PF03170 Bacterial cellulose synthase subunit AM393_RS09185 PF00535 Glycosyl transferase family 2 AM393_RS09185 PF07238 PilZ domain AM393_RS09190 PF06564 Cellulose biosynthesis protein BcsQ AM393_RS09195 PF10945 Cellulose biosynthesis protein BcsR AM393_RS09200 PF10995 Cellulose biosynthesis GIL AM393_RS09205 PF11120 Cellulose biosynthesis protein BcsF AM393_RS09210 PF11658 Cellulose biosynthesis protein BcsG AM393_RS09215 PF01270 Glycosyl hydrolases family 8 AM393_RS09225 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM393_RS09230 PF03170 Bacterial cellulose synthase subunit AM393_RS09235 PF00535 Glycosyl transferase family 2 AM393_RS09235 PF03552 Cellulose synthase AM393_RS09235 PF07238 PilZ domain AM393_RS09235 PF03170 Bacterial cellulose synthase subunit AM393_RS09255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS09255 PF00005 ABC transporter AM393_RS09260 PF00005 ABC transporter AM393_RS09260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS09265 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS09275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS09305 PF08019 Phosphoethanolamine transferase EptA/EptB AM393_RS09305 PF00884 Sulfatase AM393_RS09310 PF07690 Major Facilitator Superfamily AM393_RS09315 PF03797 Autotransporter beta-domain AM393_RS09320 PF03352 Methyladenine glycosylase AM393_RS09325 PF00583 Acetyltransferase (GNAT) family AM393_RS09330 PF00384 Molybdopterin oxidoreductase AM393_RS09330 PF01568 Molydopterin dinucleotide binding domain AM393_RS09330 PF18364 Molybdopterin oxidoreductase N-terminal domain AM393_RS09335 PF13488 Glycine zipper AM393_RS09335 PF00691 OmpA family AM393_RS09340 PF00356 Bacterial regulatory proteins, lacI family AM393_RS09350 PF00294 pfkB family carbohydrate kinase AM393_RS09355 PF07690 Major Facilitator Superfamily AM393_RS09360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM393_RS09360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS09365 PF11254 Protein of unknown function (DUF3053) AM393_RS09370 PF07690 Major Facilitator Superfamily AM393_RS09375 PF01381 Helix-turn-helix AM393_RS09380 PF00313 'Cold-shock' DNA-binding domain AM393_RS09385 PF00005 ABC transporter AM393_RS09385 PF12848 ABC transporter AM393_RS09390 PF01848 Hok/gef family AM393_RS09395 PF05746 DALR anticodon binding domain AM393_RS09395 PF02092 Glycyl-tRNA synthetase beta subunit AM393_RS09400 PF02091 Glycyl-tRNA synthetase alpha subunit AM393_RS09410 PF13983 YsaB-like lipoprotein AM393_RS09415 PF01757 Acyltransferase family AM393_RS09420 PF05360 yiaA/B two helix domain AM393_RS09425 PF05360 yiaA/B two helix domain AM393_RS09430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS09430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS09445 PF13407 Periplasmic binding protein domain AM393_RS09450 PF00005 ABC transporter AM393_RS09455 PF02653 Branched-chain amino acid transport system / permease component AM393_RS09460 PF12833 Helix-turn-helix domain AM393_RS09465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM393_RS09475 PF00128 Alpha amylase, catalytic domain AM393_RS09480 PF00155 Aminotransferase class I and II AM393_RS09485 PF12800 4Fe-4S binding domain AM393_RS09485 PF13247 4Fe-4S dicluster domain AM393_RS09490 PF09339 IclR helix-turn-helix domain AM393_RS09490 PF01614 Bacterial transcriptional regulator AM393_RS09495 PF03144 Elongation factor Tu domain 2 AM393_RS09495 PF00009 Elongation factor Tu GTP binding domain AM393_RS09495 PF09107 Elongation factor SelB, winged helix AM393_RS09495 PF09106 Elongation factor SelB, winged helix AM393_RS09500 PF03841 L-seryl-tRNA selenium transferase AM393_RS09500 PF12390 Selenocysteine synthase N terminal AM393_RS09505 PF13417 Glutathione S-transferase, N-terminal domain AM393_RS09505 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS09510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS09510 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS09515 PF11742 Protein of unknown function (DUF3302) AM393_RS09520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS09520 PF02378 Phosphotransferase system, EIIC AM393_RS09520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS09525 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS09525 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS09530 PF05068 Mannitol repressor AM393_RS09540 PF10928 Protein of unknown function (DUF2810) AM393_RS09545 PF02652 L-lactate permease AM393_RS09550 PF00392 Bacterial regulatory proteins, gntR family AM393_RS09550 PF07729 FCD domain AM393_RS09555 PF01070 FMN-dependent dehydrogenase AM393_RS09560 PF00588 SpoU rRNA Methylase family AM393_RS09565 PF06426 Serine acetyltransferase, N-terminal AM393_RS09565 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS09570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM393_RS09570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM393_RS09575 PF02556 Preprotein translocase subunit SecB AM393_RS09580 PF00462 Glutaredoxin AM393_RS09585 PF00581 Rhodanese-like domain AM393_RS09590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM393_RS09590 PF01676 Metalloenzyme superfamily AM393_RS09595 PF01551 Peptidase family M23 AM393_RS09600 PF04748 Divergent polysaccharide deacetylase AM393_RS09605 PF00535 Glycosyl transferase family 2 AM393_RS09610 PF00107 Zinc-binding dehydrogenase AM393_RS09610 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS09615 PF00155 Aminotransferase class I and II AM393_RS09620 PF01370 NAD dependent epimerase/dehydratase family AM393_RS09625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM393_RS09630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM393_RS09640 PF04932 O-Antigen ligase AM393_RS09655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM393_RS09660 PF13439 Glycosyltransferase Family 4 AM393_RS09660 PF00534 Glycosyl transferases group 1 AM393_RS09665 PF00534 Glycosyl transferases group 1 AM393_RS09665 PF13439 Glycosyltransferase Family 4 AM393_RS09670 PF00535 Glycosyl transferase family 2 AM393_RS09675 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM393_RS09680 PF00535 Glycosyl transferase family 2 AM393_RS09685 PF01467 Cytidylyltransferase-like AM393_RS09690 PF06827 Zinc finger found in FPG and IleRS AM393_RS09690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM393_RS09690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM393_RS09695 PF00471 Ribosomal protein L33 AM393_RS09700 PF00830 Ribosomal L28 family AM393_RS09705 PF04002 RadC-like JAB domain AM393_RS09710 PF04127 DNA / pantothenate metabolism flavoprotein AM393_RS09710 PF02441 Flavoprotein AM393_RS09715 PF00692 dUTPase AM393_RS09720 PF00440 Bacterial regulatory proteins, tetR family AM393_RS09725 PF00156 Phosphoribosyl transferase domain AM393_RS09730 PF01138 3' exoribonuclease family, domain 1 AM393_RS09730 PF03725 3' exoribonuclease family, domain 2 AM393_RS09740 PF00005 ABC transporter AM393_RS09760 PF08340 Domain of unknown function (DUF1732) AM393_RS09760 PF03755 YicC-like family, N-terminal region AM393_RS09770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM393_RS09770 PF02805 Metal binding domain of Ada AM393_RS09770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM393_RS09770 PF12833 Helix-turn-helix domain AM393_RS09780 PF03458 UPF0126 domain AM393_RS09785 PF03120 NAD-dependent DNA ligase OB-fold domain AM393_RS09785 PF01653 NAD-dependent DNA ligase adenylation domain AM393_RS09790 PF00625 Guanylate kinase AM393_RS09795 PF01192 RNA polymerase Rpb6 AM393_RS09800 PF13291 ACT domain AM393_RS09800 PF04607 Region found in RelA / SpoT proteins AM393_RS09800 PF02824 TGS domain AM393_RS09805 PF00588 SpoU rRNA Methylase family AM393_RS09805 PF12105 SpoU, rRNA methylase, C-terminal AM393_RS09810 PF17191 RecG wedge domain AM393_RS09810 PF00271 Helicase conserved C-terminal domain AM393_RS09810 PF00270 DEAD/DEAH box helicase AM393_RS09815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM393_RS09820 PF00175 Oxidoreductase NAD-binding domain AM393_RS09820 PF00970 Oxidoreductase FAD-binding domain AM393_RS09825 PF05656 Protein of unknown function (DUF805) AM393_RS09830 PF07305 Protein of unknown function (DUF1454) AM393_RS09835 PF00121 Triosephosphate isomerase AM393_RS09845 PF02611 CDP-diacylglycerol pyrophosphatase AM393_RS09855 PF06005 Cell division protein ZapB AM393_RS09860 PF00230 Major intrinsic protein AM393_RS09865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS09865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS09870 PF03616 Sodium/glutamate symporter AM393_RS09875 PF00860 Permease family AM393_RS09880 PF05170 AsmA family AM393_RS09885 PF00367 phosphotransferase system, EIIB AM393_RS09885 PF02378 Phosphotransferase system, EIIC AM393_RS09890 PF02056 Family 4 glycosyl hydrolase AM393_RS09890 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS09900 PF13802 Galactose mutarotase-like AM393_RS09900 PF01055 Glycosyl hydrolases family 31 AM393_RS09925 PF00107 Zinc-binding dehydrogenase AM393_RS09925 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS09940 PF00107 Zinc-binding dehydrogenase AM393_RS09940 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS09945 PF01965 DJ-1/PfpI family AM393_RS09950 PF12706 Beta-lactamase superfamily domain AM393_RS09955 PF00293 NUDIX domain AM393_RS09965 PF03180 NLPA lipoprotein AM393_RS09970 PF12833 Helix-turn-helix domain AM393_RS09990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS09990 PF03466 LysR substrate binding domain AM393_RS09995 PF07690 Major Facilitator Superfamily AM393_RS10000 PF00440 Bacterial regulatory proteins, tetR family AM393_RS10010 PF00583 Acetyltransferase (GNAT) family AM393_RS10020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS10020 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS10025 PF00873 AcrB/AcrD/AcrF family AM393_RS10030 PF02321 Outer membrane efflux protein AM393_RS10035 PF07690 Major Facilitator Superfamily AM393_RS10040 PF13580 SIS domain AM393_RS10045 PF02378 Phosphotransferase system, EIIC AM393_RS10045 PF00367 phosphotransferase system, EIIB AM393_RS10050 PF00892 EamA-like transporter family AM393_RS10065 PF04303 PrpF protein AM393_RS10070 PF03737 Aldolase/RraA AM393_RS10075 PF02585 GlcNAc-PI de-N-acetylase AM393_RS10080 PF03466 LysR substrate binding domain AM393_RS10080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS10085 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM393_RS10085 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AM393_RS10090 PF07690 Major Facilitator Superfamily AM393_RS10095 PF00356 Bacterial regulatory proteins, lacI family AM393_RS10100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS10105 PF02378 Phosphotransferase system, EIIC AM393_RS10105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS10110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM393_RS10115 PF02264 LamB porin AM393_RS10125 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS10130 PF08402 TOBE domain AM393_RS10130 PF00005 ABC transporter AM393_RS10135 PF01547 Bacterial extracellular solute-binding protein AM393_RS10140 PF07702 UTRA domain AM393_RS10140 PF00392 Bacterial regulatory proteins, gntR family AM393_RS10150 PF00266 Aminotransferase class-V AM393_RS10160 PF07690 Major Facilitator Superfamily AM393_RS10175 PF06711 Protein of unknown function (DUF1198) AM393_RS10180 PF07690 Major Facilitator Superfamily AM393_RS10185 PF07690 Major Facilitator Superfamily AM393_RS10190 PF07730 Histidine kinase AM393_RS10190 PF05231 MASE1 AM393_RS10190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS10195 PF00196 Bacterial regulatory proteins, luxR family AM393_RS10195 PF00072 Response regulator receiver domain AM393_RS10200 PF01842 ACT domain AM393_RS10205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS10205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS10205 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS10230 PF07690 Major Facilitator Superfamily AM393_RS10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS10235 PF03466 LysR substrate binding domain AM393_RS10240 PF02447 GntP family permease AM393_RS10245 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS10255 PF02656 Domain of unknown function (DUF202) AM393_RS10260 PF02656 Domain of unknown function (DUF202) AM393_RS10265 PF02056 Family 4 glycosyl hydrolase AM393_RS10265 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS10270 PF00367 phosphotransferase system, EIIB AM393_RS10270 PF02378 Phosphotransferase system, EIIC AM393_RS10275 PF00392 Bacterial regulatory proteins, gntR family AM393_RS10275 PF07702 UTRA domain AM393_RS10280 PF02080 TrkA-C domain AM393_RS10280 PF06826 Predicted Permease Membrane Region AM393_RS10290 PF00011 Hsp20/alpha crystallin family AM393_RS10295 PF00011 Hsp20/alpha crystallin family AM393_RS10300 PF07119 Protein of unknown function (DUF1375) AM393_RS10305 PF07676 WD40-like Beta Propeller Repeat AM393_RS10305 PF12566 Protein of unknown function (DUF3748) AM393_RS10310 PF07690 Major Facilitator Superfamily AM393_RS10315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM393_RS10315 PF13378 Enolase C-terminal domain-like AM393_RS10320 PF01081 KDPG and KHG aldolase AM393_RS10325 PF05035 2-keto-3-deoxy-galactonokinase AM393_RS10330 PF07729 FCD domain AM393_RS10330 PF00392 Bacterial regulatory proteins, gntR family AM393_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS10350 PF18053 DNA gyrase B subunit insert domain AM393_RS10350 PF00204 DNA gyrase B AM393_RS10350 PF00986 DNA gyrase B subunit, carboxyl terminus AM393_RS10350 PF01751 Toprim domain AM393_RS10355 PF02463 RecF/RecN/SMC N terminal domain AM393_RS10360 PF00712 DNA polymerase III beta subunit, N-terminal domain AM393_RS10360 PF02767 DNA polymerase III beta subunit, central domain AM393_RS10360 PF02768 DNA polymerase III beta subunit, C-terminal domain AM393_RS10365 PF11638 DnaA N-terminal domain AM393_RS10365 PF08299 Bacterial dnaA protein helix-turn-helix AM393_RS10365 PF00308 Bacterial dnaA protein AM393_RS10375 PF00468 Ribosomal protein L34 AM393_RS10380 PF00825 Ribonuclease P AM393_RS10385 PF01809 Putative membrane protein insertion efficiency factor AM393_RS10390 PF14849 YidC periplasmic domain AM393_RS10390 PF02096 60Kd inner membrane protein AM393_RS10395 PF12631 MnmE helical domain AM393_RS10395 PF10396 GTP-binding protein TrmE N-terminus AM393_RS10395 PF01926 50S ribosome-binding GTPase AM393_RS10405 PF07690 Major Facilitator Superfamily AM393_RS10410 PF03466 LysR substrate binding domain AM393_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS10420 PF03358 NADPH-dependent FMN reductase AM393_RS10425 PF00860 Permease family AM393_RS10435 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS10440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM393_RS10445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM393_RS10445 PF00756 Putative esterase AM393_RS10450 PF02264 LamB porin AM393_RS10450 PF11471 Maltoporin periplasmic N-terminal extension AM393_RS10460 PF01895 PhoU domain AM393_RS10465 PF00005 ABC transporter AM393_RS10470 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS10475 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS10480 PF12849 PBP superfamily domain AM393_RS10485 PF01380 SIS domain AM393_RS10490 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS10490 PF12804 MobA-like NTP transferase domain AM393_RS10495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM393_RS10495 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM393_RS10500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM393_RS10500 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM393_RS10505 PF00231 ATP synthase AM393_RS10510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM393_RS10510 PF00306 ATP synthase alpha/beta chain, C terminal domain AM393_RS10510 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM393_RS10515 PF00213 ATP synthase delta (OSCP) subunit AM393_RS10520 PF00430 ATP synthase B/B' CF(0) AM393_RS10525 PF00137 ATP synthase subunit C AM393_RS10530 PF00119 ATP synthase A chain AM393_RS10535 PF03899 ATP synthase I chain AM393_RS10540 PF02527 rRNA small subunit methyltransferase G AM393_RS10545 PF13932 GidA associated domain AM393_RS10545 PF01134 Glucose inhibited division protein A AM393_RS10550 PF00258 Flavodoxin AM393_RS10555 PF01037 Lrp/AsnC ligand binding domain AM393_RS10560 PF03590 Aspartate-ammonia ligase AM393_RS10565 PF05762 VWA domain containing CoxE-like protein AM393_RS10570 PF07728 AAA domain (dynein-related subfamily) AM393_RS10570 PF17868 AAA lid domain AM393_RS10570 PF12592 Protein of unknown function (DUF3763) AM393_RS10575 PF02705 K+ potassium transporter AM393_RS10580 PF05025 RbsD / FucU transport protein family AM393_RS10585 PF00005 ABC transporter AM393_RS10590 PF02653 Branched-chain amino acid transport system / permease component AM393_RS10595 PF13407 Periplasmic binding protein domain AM393_RS10600 PF00294 pfkB family carbohydrate kinase AM393_RS10605 PF00356 Bacterial regulatory proteins, lacI family AM393_RS10610 PF07690 Major Facilitator Superfamily AM393_RS10615 PF00392 Bacterial regulatory proteins, gntR family AM393_RS10615 PF07729 FCD domain AM393_RS10645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM393_RS10650 PF12804 MobA-like NTP transferase domain AM393_RS10655 PF06288 Protein of unknown function (DUF1040) AM393_RS10660 PF01636 Phosphotransferase enzyme family AM393_RS10665 PF01323 DSBA-like thioredoxin domain AM393_RS10670 PF01553 Acyltransferase AM393_RS10675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM393_RS10675 PF01367 5'-3' exonuclease, C-terminal SAM fold AM393_RS10675 PF01612 3'-5' exonuclease AM393_RS10675 PF00476 DNA polymerase family A AM393_RS10680 PF01926 50S ribosome-binding GTPase AM393_RS10685 PF04220 Der GTPase activator (YihI) AM393_RS10695 PF06969 HemN C-terminal domain AM393_RS10695 PF04055 Radical SAM superfamily AM393_RS10705 PF02954 Bacterial regulatory protein, Fis family AM393_RS10705 PF00072 Response regulator receiver domain AM393_RS10705 PF00158 Sigma-54 interaction domain AM393_RS10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS10710 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS10710 PF00989 PAS fold AM393_RS10715 PF00120 Glutamine synthetase, catalytic domain AM393_RS10715 PF03951 Glutamine synthetase, beta-Grasp domain AM393_RS10725 PF00679 Elongation factor G C-terminus AM393_RS10725 PF00009 Elongation factor Tu GTP binding domain AM393_RS10725 PF03144 Elongation factor Tu domain 2 AM393_RS10730 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS10735 PF03631 Virulence factor BrkB AM393_RS10740 PF02580 D-Tyr-tRNA(Tyr) deacylase AM393_RS10745 PF09500 Putative thioesterase (yiiD_Cterm) AM393_RS10745 PF00583 Acetyltransferase (GNAT) family AM393_RS10750 PF07859 alpha/beta hydrolase fold AM393_RS10765 PF04216 Protein involved in formate dehydrogenase formation AM393_RS10770 PF01292 Prokaryotic cytochrome b561 AM393_RS10775 PF13247 4Fe-4S dicluster domain AM393_RS10775 PF09163 Formate dehydrogenase N, transmembrane AM393_RS10790 PF02634 FdhD/NarQ family AM393_RS10800 PF00365 Phosphofructokinase AM393_RS10810 PF03611 PTS system sugar-specific permease component AM393_RS10815 PF01116 Fructose-bisphosphate aldolase class-II AM393_RS10825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS10850 PF00356 Bacterial regulatory proteins, lacI family AM393_RS10850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM393_RS10855 PF16874 Glycosyl hydrolase family 36 C-terminal domain AM393_RS10855 PF16875 Glycosyl hydrolase family 36 N-terminal domain AM393_RS10860 PF01306 LacY proton/sugar symporter AM393_RS10865 PF05336 L-rhamnose mutarotase AM393_RS10870 PF00465 Iron-containing alcohol dehydrogenase AM393_RS10875 PF02653 Branched-chain amino acid transport system / permease component AM393_RS10880 PF02653 Branched-chain amino acid transport system / permease component AM393_RS10885 PF00005 ABC transporter AM393_RS10890 PF13407 Periplasmic binding protein domain AM393_RS10895 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS10900 PF06134 L-rhamnose isomerase (RhaA) AM393_RS10905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS10905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS10915 PF02311 AraC-like ligand binding domain AM393_RS10915 PF12833 Helix-turn-helix domain AM393_RS10920 PF12833 Helix-turn-helix domain AM393_RS10920 PF02311 AraC-like ligand binding domain AM393_RS10925 PF06379 L-rhamnose-proton symport protein (RhaT) AM393_RS10930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM393_RS10930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM393_RS10935 PF03473 MOSC domain AM393_RS10935 PF03475 3-alpha domain AM393_RS10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS10940 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS10940 PF00672 HAMP domain AM393_RS10940 PF16527 Two-component sensor protein CpxA, periplasmic domain AM393_RS10945 PF00486 Transcriptional regulatory protein, C terminal AM393_RS10945 PF00072 Response regulator receiver domain AM393_RS10950 PF07813 LTXXQ motif family protein AM393_RS10955 PF01545 Cation efflux family AM393_RS10955 PF16916 Dimerisation domain of Zinc Transporter AM393_RS10960 PF00365 Phosphofructokinase AM393_RS10965 PF03737 Aldolase/RraA AM393_RS10970 PF01040 UbiA prenyltransferase family AM393_RS10975 PF10431 C-terminal, D2-small domain, of ClpB protein AM393_RS10975 PF07724 AAA domain (Cdc48 subfamily) AM393_RS10975 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS10980 PF00227 Proteasome subunit AM393_RS10985 PF05036 Sporulation related domain AM393_RS10990 PF00356 Bacterial regulatory proteins, lacI family AM393_RS10995 PF00270 DEAD/DEAH box helicase AM393_RS10995 PF00271 Helicase conserved C-terminal domain AM393_RS10995 PF17764 3′ DNA-binding domain (3′BD) AM393_RS10995 PF18074 Primosomal protein N C-terminal domain AM393_RS10995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM393_RS11000 PF01197 Ribosomal protein L31 AM393_RS11005 PF01340 Met Apo-repressor, MetJ AM393_RS11010 PF01053 Cys/Met metabolism PLP-dependent enzyme AM393_RS11015 PF00696 Amino acid kinase family AM393_RS11015 PF03447 Homoserine dehydrogenase, NAD binding domain AM393_RS11015 PF00742 Homoserine dehydrogenase AM393_RS11025 PF02872 5'-nucleotidase, C-terminal domain AM393_RS11025 PF00149 Calcineurin-like phosphoesterase AM393_RS11030 PF02627 Carboxymuconolactone decarboxylase family AM393_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS11035 PF03466 LysR substrate binding domain AM393_RS11040 PF02219 Methylenetetrahydrofolate reductase AM393_RS11045 PF00892 EamA-like transporter family AM393_RS11050 PF00465 Iron-containing alcohol dehydrogenase AM393_RS11055 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM393_RS11060 PF12833 Helix-turn-helix domain AM393_RS11065 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM393_RS11070 PF00311 Phosphoenolpyruvate carboxylase AM393_RS11075 PF07687 Peptidase dimerisation domain AM393_RS11075 PF01546 Peptidase family M20/M25/M40 AM393_RS11080 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM393_RS11080 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM393_RS11085 PF00696 Amino acid kinase family AM393_RS11095 PF14698 Argininosuccinate lyase C-terminal AM393_RS11095 PF00206 Lyase AM393_RS11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS11105 PF03466 LysR substrate binding domain AM393_RS11110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM393_RS11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS11115 PF00440 Bacterial regulatory proteins, tetR family AM393_RS11120 PF07226 Protein of unknown function (DUF1422) AM393_RS11125 PF05958 tRNA (Uracil-5-)-methyltransferase AM393_RS11130 PF00593 TonB dependent receptor AM393_RS11130 PF07715 TonB-dependent Receptor Plug Domain AM393_RS11135 PF01177 Asp/Glu/Hydantoin racemase AM393_RS11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS11175 PF03466 LysR substrate binding domain AM393_RS11180 PF04219 Protein of unknown function, DUF AM393_RS11185 PF01078 Magnesium chelatase, subunit ChlI AM393_RS11185 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM393_RS11190 PF08046 IlvGEDA operon leader peptide AM393_RS11195 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS11195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS11195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS11205 PF01063 Amino-transferase class IV AM393_RS11210 PF00920 Dehydratase family AM393_RS11215 PF00585 C-terminal regulatory domain of Threonine dehydratase AM393_RS11215 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS11220 PF03466 LysR substrate binding domain AM393_RS11225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM393_RS11225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM393_RS11240 PF00580 UvrD/REP helicase N-terminal domain AM393_RS11240 PF13361 UvrD-like helicase C-terminal domain AM393_RS11245 PF04474 Protein of unknown function (DUF554) AM393_RS11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS11255 PF03466 LysR substrate binding domain AM393_RS11260 PF02541 Ppx/GppA phosphatase family AM393_RS11270 PF00271 Helicase conserved C-terminal domain AM393_RS11270 PF00270 DEAD/DEAH box helicase AM393_RS11275 PF00085 Thioredoxin AM393_RS11285 PF07498 Rho termination factor, N-terminal domain AM393_RS11285 PF07497 Rho termination factor, RNA-binding domain AM393_RS11285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM393_RS11290 PF00953 Glycosyl transferase family 4 AM393_RS11295 PF02706 Chain length determinant protein AM393_RS11300 PF02350 UDP-N-acetylglucosamine 2-epimerase AM393_RS11305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM393_RS11305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM393_RS11305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM393_RS11310 PF16363 GDP-mannose 4,6 dehydratase AM393_RS11315 PF00483 Nucleotidyl transferase AM393_RS11325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM393_RS11330 PF01943 Polysaccharide biosynthesis protein AM393_RS11335 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM393_RS11340 PF06899 WzyE protein, O-antigen assembly polymerase AM393_RS11345 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM393_RS11350 PF00324 Amino acid permease AM393_RS11375 PF07219 HemY protein N-terminus AM393_RS11375 PF07719 Tetratricopeptide repeat AM393_RS11380 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM393_RS11385 PF02602 Uroporphyrinogen-III synthase HemD AM393_RS11390 PF03900 Porphobilinogen deaminase, C-terminal domain AM393_RS11390 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM393_RS11395 PF12633 Adenylate cyclase NT domain AM393_RS11395 PF01295 Adenylate cyclase, class-I AM393_RS11400 PF01491 Frataxin-like domain AM393_RS11405 PF13627 Prokaryotic lipoprotein-attachment site AM393_RS11410 PF01678 Diaminopimelate epimerase AM393_RS11415 PF04340 Protein of unknown function, DUF484 AM393_RS11420 PF00589 Phage integrase family AM393_RS11420 PF02899 Phage integrase, N-terminal SAM-like domain AM393_RS11425 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS11430 PF00580 UvrD/REP helicase N-terminal domain AM393_RS11430 PF13361 UvrD-like helicase C-terminal domain AM393_RS11440 PF01544 CorA-like Mg2+ transporter protein AM393_RS11445 PF00892 EamA-like transporter family AM393_RS11450 PF03061 Thioesterase superfamily AM393_RS11455 PF02253 Phospholipase A1 AM393_RS11460 PF16124 RecQ zinc-binding AM393_RS11460 PF00570 HRDC domain AM393_RS11460 PF00271 Helicase conserved C-terminal domain AM393_RS11460 PF00270 DEAD/DEAH box helicase AM393_RS11460 PF09382 RQC domain AM393_RS11465 PF01810 LysE type translocator AM393_RS11470 PF04754 Putative transposase, YhgA-like AM393_RS11475 PF01810 LysE type translocator AM393_RS11480 PF12146 Serine aminopeptidase, S33 AM393_RS11490 PF00892 EamA-like transporter family AM393_RS11495 PF03466 LysR substrate binding domain AM393_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS11500 PF08267 Cobalamin-independent synthase, N-terminal domain AM393_RS11500 PF01717 Cobalamin-independent synthase, Catalytic domain AM393_RS11505 PF01738 Dienelactone hydrolase family AM393_RS11510 PF01048 Phosphorylase superfamily AM393_RS11515 PF02646 RmuC family AM393_RS11520 PF01209 ubiE/COQ5 methyltransferase family AM393_RS11525 PF02036 SCP-2 sterol transfer family AM393_RS11530 PF03109 ABC1 family AM393_RS11535 PF02416 mttA/Hcf106 family AM393_RS11545 PF00902 Sec-independent protein translocase protein (TatC) AM393_RS11550 PF01026 TatD related DNase AM393_RS11555 PF02357 Transcription termination factor nusG AM393_RS11560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM393_RS11565 PF00175 Oxidoreductase NAD-binding domain AM393_RS11565 PF00970 Oxidoreductase FAD-binding domain AM393_RS11570 PF00108 Thiolase, N-terminal domain AM393_RS11570 PF02803 Thiolase, C-terminal domain AM393_RS11575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM393_RS11575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM393_RS11575 PF00378 Enoyl-CoA hydratase/isomerase AM393_RS11585 PF00557 Metallopeptidase family M24 AM393_RS11590 PF09186 Domain of unknown function (DUF1949) AM393_RS11590 PF01205 Uncharacterized protein family UPF0029 AM393_RS11595 PF02386 Cation transport protein AM393_RS11600 PF12724 Flavodoxin domain AM393_RS11635 PF01565 FAD binding domain AM393_RS11635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM393_RS11640 PF02237 Biotin protein ligase C terminal domain AM393_RS11640 PF03099 Biotin/lipoate A/B protein ligase family AM393_RS11640 PF08279 HTH domain AM393_RS11645 PF00485 Phosphoribulokinase / Uridine kinase family AM393_RS11670 PF03144 Elongation factor Tu domain 2 AM393_RS11670 PF00009 Elongation factor Tu GTP binding domain AM393_RS11670 PF03143 Elongation factor Tu C-terminal domain AM393_RS11680 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM393_RS11685 PF02357 Transcription termination factor nusG AM393_RS11685 PF00467 KOW motif AM393_RS11690 PF03946 Ribosomal protein L11, N-terminal domain AM393_RS11690 PF00298 Ribosomal protein L11, RNA binding domain AM393_RS11695 PF00687 Ribosomal protein L1p/L10e family AM393_RS11705 PF00466 Ribosomal protein L10 AM393_RS11710 PF00542 Ribosomal protein L7/L12 C-terminal domain AM393_RS11710 PF16320 Ribosomal protein L7/L12 dimerisation domain AM393_RS11715 PF04561 RNA polymerase Rpb2, domain 2 AM393_RS11715 PF10385 RNA polymerase beta subunit external 1 domain AM393_RS11715 PF04563 RNA polymerase beta subunit AM393_RS11715 PF04565 RNA polymerase Rpb2, domain 3 AM393_RS11715 PF04560 RNA polymerase Rpb2, domain 7 AM393_RS11715 PF00562 RNA polymerase Rpb2, domain 6 AM393_RS11720 PF04997 RNA polymerase Rpb1, domain 1 AM393_RS11720 PF04998 RNA polymerase Rpb1, domain 5 AM393_RS11720 PF04983 RNA polymerase Rpb1, domain 3 AM393_RS11720 PF05000 RNA polymerase Rpb1, domain 4 AM393_RS11720 PF00623 RNA polymerase Rpb1, domain 2 AM393_RS11725 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM393_RS11730 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM393_RS11735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS11740 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS11750 PF04055 Radical SAM superfamily AM393_RS11750 PF06968 Biotin and Thiamin Synthesis associated domain AM393_RS11755 PF05690 Thiazole biosynthesis protein ThiG AM393_RS11760 PF02597 ThiS family AM393_RS11765 PF00899 ThiF family AM393_RS11770 PF02581 Thiamine monophosphate synthase AM393_RS11775 PF13667 ThiC-associated domain AM393_RS11775 PF01964 Radical SAM ThiC family AM393_RS11780 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM393_RS11785 PF00293 NUDIX domain AM393_RS11785 PF09297 NADH pyrophosphatase zinc ribbon domain AM393_RS11790 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM393_RS11795 PF04493 Endonuclease V AM393_RS11800 PF04222 Protein of unknown function (DUF416) AM393_RS11805 PF00216 Bacterial DNA-binding protein AM393_RS11810 PF07356 Protein of unknown function (DUF1481) AM393_RS11815 PF13801 Heavy-metal resistance AM393_RS11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS11820 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS11825 PF02954 Bacterial regulatory protein, Fis family AM393_RS11825 PF00158 Sigma-54 interaction domain AM393_RS11825 PF00072 Response regulator receiver domain AM393_RS11830 PF02843 Phosphoribosylglycinamide synthetase, C domain AM393_RS11830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM393_RS11830 PF02844 Phosphoribosylglycinamide synthetase, N domain AM393_RS11835 PF02142 MGS-like domain AM393_RS11835 PF01808 AICARFT/IMPCHase bienzyme AM393_RS11865 PF13673 Acetyltransferase (GNAT) domain AM393_RS11870 PF04204 Homoserine O-succinyltransferase AM393_RS11875 PF01274 Malate synthase AM393_RS11880 PF00463 Isocitrate lyase family AM393_RS11885 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM393_RS11890 PF01614 Bacterial transcriptional regulator AM393_RS11890 PF09339 IclR helix-turn-helix domain AM393_RS11895 PF02310 B12 binding domain AM393_RS11895 PF02607 B12 binding domain AM393_RS11895 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM393_RS11895 PF00809 Pterin binding enzyme AM393_RS11895 PF02574 Homocysteine S-methyltransferase AM393_RS11900 PF02690 Na+/Pi-cotransporter AM393_RS11905 PF08501 Shikimate dehydrogenase substrate binding domain AM393_RS11910 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS11910 PF00107 Zinc-binding dehydrogenase AM393_RS11915 PF03613 PTS system mannose/fructose/sorbose family IID component AM393_RS11920 PF03609 PTS system sorbose-specific iic component AM393_RS11925 PF03830 PTS system sorbose subfamily IIB component AM393_RS11930 PF03610 PTS system fructose IIA component AM393_RS11935 PF00106 short chain dehydrogenase AM393_RS11940 PF13936 Helix-turn-helix domain AM393_RS11940 PF04198 Putative sugar-binding domain AM393_RS11945 PF01479 S4 domain AM393_RS11945 PF00849 RNA pseudouridylate synthase AM393_RS11950 PF11656 YjbD family (DUF3811) AM393_RS11955 PF01758 Sodium Bile acid symporter family AM393_RS11960 PF00696 Amino acid kinase family AM393_RS11960 PF01842 ACT domain AM393_RS11970 PF00342 Phosphoglucose isomerase AM393_RS11975 PF12804 MobA-like NTP transferase domain AM393_RS11975 PF14602 Hexapeptide repeat of succinyl-transferase AM393_RS11975 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS11985 PF01042 Endoribonuclease L-PSP AM393_RS12000 PF03313 Serine dehydratase alpha chain AM393_RS12005 PF06146 Phosphate-starvation-inducible E AM393_RS12010 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS12015 PF14785 Maltose transport system permease protein MalF P2 domain AM393_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS12020 PF01547 Bacterial extracellular solute-binding protein AM393_RS12030 PF00005 ABC transporter AM393_RS12030 PF17912 MalK OB fold domain AM393_RS12035 PF02264 LamB porin AM393_RS12040 PF07148 Maltose operon periplasmic protein precursor (MalM) AM393_RS12045 PF04345 Chorismate lyase AM393_RS12050 PF01040 UbiA prenyltransferase family AM393_RS12055 PF01553 Acyltransferase AM393_RS12060 PF01219 Prokaryotic diacylglycerol kinase AM393_RS12065 PF01726 LexA DNA binding domain AM393_RS12065 PF00717 Peptidase S24-like AM393_RS12070 PF01554 MatE AM393_RS12075 PF05532 CsbD-like AM393_RS12080 PF01475 Ferric uptake regulator family AM393_RS12090 PF01207 Dihydrouridine synthase (Dus) AM393_RS12095 PF09583 Phage shock protein G (Phageshock_PspG) AM393_RS12100 PF00107 Zinc-binding dehydrogenase AM393_RS12100 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS12105 PF03796 DnaB-like helicase C terminal domain AM393_RS12105 PF00772 DnaB-like helicase N terminal domain AM393_RS12110 PF00842 Alanine racemase, C-terminal domain AM393_RS12110 PF01168 Alanine racemase, N-terminal domain AM393_RS12115 PF00155 Aminotransferase class I and II AM393_RS12120 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM393_RS12125 PF01894 Uncharacterised protein family UPF0047 AM393_RS12130 PF04237 YjbR AM393_RS12135 PF00005 ABC transporter AM393_RS12135 PF17755 UvrA DNA-binding domain AM393_RS12135 PF17760 UvrA interaction domain AM393_RS12140 PF00436 Single-strand binding protein family AM393_RS12145 PF01464 Transglycosylase SLT domain AM393_RS12150 PF00593 TonB dependent receptor AM393_RS12150 PF07715 TonB-dependent Receptor Plug Domain AM393_RS12155 PF12833 Helix-turn-helix domain AM393_RS12160 PF07519 Tannase and feruloyl esterase AM393_RS12170 PF07244 Surface antigen variable number repeat AM393_RS12170 PF01103 Surface antigen AM393_RS12185 PF00459 Inositol monophosphatase family AM393_RS12190 PF00356 Bacterial regulatory proteins, lacI family AM393_RS12195 PF12706 Beta-lactamase superfamily domain AM393_RS12195 PF00753 Metallo-beta-lactamase superfamily AM393_RS12200 PF00005 ABC transporter AM393_RS12200 PF08402 TOBE domain AM393_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS12220 PF15940 Family of unknown function AM393_RS12230 PF12792 CSS motif domain associated with EAL AM393_RS12230 PF00563 EAL domain AM393_RS12235 PF12833 Helix-turn-helix domain AM393_RS12240 PF00376 MerR family regulatory protein AM393_RS12240 PF09278 MerR, DNA binding AM393_RS12245 PF02798 Glutathione S-transferase, N-terminal domain AM393_RS12245 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS12255 PF00860 Permease family AM393_RS12260 PF00999 Sodium/hydrogen exchanger family AM393_RS12265 PF03466 LysR substrate binding domain AM393_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS12270 PF03788 LrgA family AM393_RS12275 PF04172 LrgB-like family AM393_RS12280 PF00419 Fimbrial protein AM393_RS12285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS12285 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS12290 PF13953 PapC C-terminal domain AM393_RS12290 PF00577 Outer membrane usher protein AM393_RS12290 PF13954 PapC N-terminal domain AM393_RS12305 PF00474 Sodium:solute symporter family AM393_RS12310 PF04341 Protein of unknown function, DUF485 AM393_RS12320 PF16177 Acetyl-coenzyme A synthetase N-terminus AM393_RS12320 PF13193 AMP-binding enzyme C-terminal domain AM393_RS12320 PF00501 AMP-binding enzyme AM393_RS12330 PF00375 Sodium:dicarboxylate symporter family AM393_RS12335 PF08238 Sel1 repeat AM393_RS12345 PF00486 Transcriptional regulatory protein, C terminal AM393_RS12345 PF00072 Response regulator receiver domain AM393_RS12365 PF13407 Periplasmic binding protein domain AM393_RS12370 PF02653 Branched-chain amino acid transport system / permease component AM393_RS12375 PF00005 ABC transporter AM393_RS12380 PF00072 Response regulator receiver domain AM393_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS12380 PF13426 PAS domain AM393_RS12390 PF12706 Beta-lactamase superfamily domain AM393_RS12400 PF07969 Amidohydrolase family AM393_RS12405 PF00005 ABC transporter AM393_RS12410 PF00005 ABC transporter AM393_RS12415 PF06007 Phosphonate metabolism protein PhnJ AM393_RS12420 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM393_RS12425 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM393_RS12430 PF06754 Phosphonate metabolism protein PhnG AM393_RS12435 PF00392 Bacterial regulatory proteins, gntR family AM393_RS12435 PF07702 UTRA domain AM393_RS12440 PF06983 3-demethylubiquinone-9 3-methyltransferase AM393_RS12445 PF08274 PhnA Zinc-Ribbon AM393_RS12445 PF03831 PhnA domain AM393_RS12455 PF08946 Osmosensory transporter coiled coil AM393_RS12455 PF00083 Sugar (and other) transporter AM393_RS12460 PF12833 Helix-turn-helix domain AM393_RS12470 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS12470 PF02056 Family 4 glycosyl hydrolase AM393_RS12480 PF06406 StbA protein AM393_RS12500 PF01556 DnaJ C terminal domain AM393_RS12500 PF00226 DnaJ domain AM393_RS12505 PF03741 Integral membrane protein TerC family AM393_RS12525 PF00535 Glycosyl transferase family 2 AM393_RS12530 PF14883 Hypothetical glycosyl hydrolase family 13 AM393_RS12530 PF01522 Polysaccharide deacetylase AM393_RS12565 PF02683 Cytochrome C biogenesis protein transmembrane region AM393_RS12565 PF11412 Disulphide bond corrector protein DsbC AM393_RS12570 PF03091 CutA1 divalent ion tolerance protein AM393_RS12575 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM393_RS12580 PF10415 Fumarase C C-terminus AM393_RS12580 PF00206 Lyase AM393_RS12590 PF04186 FxsA cytoplasmic membrane protein AM393_RS12595 PF13520 Amino acid permease AM393_RS12600 PF00166 Chaperonin 10 Kd subunit AM393_RS12605 PF00118 TCP-1/cpn60 chaperonin family AM393_RS12610 PF13698 Domain of unknown function (DUF4156) AM393_RS12620 PF03412 Peptidase C39 family AM393_RS12620 PF00005 ABC transporter AM393_RS12620 PF00664 ABC transporter transmembrane region AM393_RS12625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS12625 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS12645 PF00577 Outer membrane usher protein AM393_RS12645 PF13954 PapC N-terminal domain AM393_RS12645 PF13953 PapC C-terminal domain AM393_RS12650 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS12650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS12665 PF04055 Radical SAM superfamily AM393_RS12670 PF09285 Elongation factor P, C-terminal AM393_RS12670 PF08207 Elongation factor P (EF-P) KOW-like domain AM393_RS12670 PF01132 Elongation factor P (EF-P) OB domain AM393_RS12680 PF08085 Entericidin EcnA/B family AM393_RS12685 PF00893 Small Multidrug Resistance protein AM393_RS12690 PF08212 Lipocalin-like domain AM393_RS12695 PF02313 Fumarate reductase subunit D AM393_RS12700 PF02300 Fumarate reductase subunit C AM393_RS12705 PF13183 4Fe-4S dicluster domain AM393_RS12705 PF13085 2Fe-2S iron-sulfur cluster binding domain AM393_RS12710 PF02910 Fumarate reductase flavoprotein C-term AM393_RS12710 PF00890 FAD binding domain AM393_RS12715 PF00152 tRNA synthetases class II (D, K and N) AM393_RS12720 PF13520 Amino acid permease AM393_RS12725 PF12795 Mechanosensitive ion channel porin domain AM393_RS12725 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM393_RS12725 PF00924 Mechanosensitive ion channel AM393_RS12730 PF02666 Phosphatidylserine decarboxylase AM393_RS12735 PF03193 RsgA GTPase AM393_RS12745 PF00929 Exonuclease AM393_RS12750 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS12775 PF08331 Domain of unknown function (DUF1730) AM393_RS12780 PF03853 YjeF-related protein N-terminus AM393_RS12780 PF01256 Carbohydrate kinase AM393_RS12785 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM393_RS12790 PF01520 N-acetylmuramoyl-L-alanine amidase AM393_RS12795 PF08676 MutL C terminal dimerisation domain AM393_RS12795 PF01119 DNA mismatch repair protein, C-terminal domain AM393_RS12805 PF17209 Hfq protein AM393_RS12810 PF01926 50S ribosome-binding GTPase AM393_RS12810 PF16360 GTP-binding GTPase Middle Region AM393_RS12810 PF13167 GTP-binding GTPase N-terminal AM393_RS12815 PF12221 Bacterial membrane protein N terminal AM393_RS12815 PF01145 SPFH domain / Band 7 family AM393_RS12820 PF01145 SPFH domain / Band 7 family AM393_RS12830 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM393_RS12835 PF00709 Adenylosuccinate synthetase AM393_RS12840 PF02082 Transcriptional regulator AM393_RS12845 PF00773 RNB domain AM393_RS12845 PF00575 S1 RNA binding domain AM393_RS12845 PF08206 Ribonuclease B OB domain AM393_RS12845 PF08461 Ribonuclease R winged-helix domain AM393_RS12845 PF17876 Cold shock domain AM393_RS12850 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM393_RS12850 PF00588 SpoU rRNA Methylase family AM393_RS12855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM393_RS12855 PF18158 Adaptive response protein AidB N-terminal domain AM393_RS12855 PF02770 Acyl-CoA dehydrogenase, middle domain AM393_RS12860 PF07338 Protein of unknown function (DUF1471) AM393_RS12865 PF07338 Protein of unknown function (DUF1471) AM393_RS12870 PF00326 Prolyl oligopeptidase family AM393_RS12875 PF08220 DeoR-like helix-turn-helix domain AM393_RS12875 PF00455 DeoR C terminal sensor domain AM393_RS12885 PF03611 PTS system sugar-specific permease component AM393_RS12890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS12895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS12900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM393_RS12905 PF01261 Xylose isomerase-like TIM barrel AM393_RS12910 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS12915 PF07690 Major Facilitator Superfamily AM393_RS12920 PF07338 Protein of unknown function (DUF1471) AM393_RS12925 PF01250 Ribosomal protein S6 AM393_RS12930 PF00436 Single-strand binding protein family AM393_RS12935 PF01084 Ribosomal protein S18 AM393_RS12940 PF01281 Ribosomal protein L9, N-terminal domain AM393_RS12940 PF03948 Ribosomal protein L9, C-terminal domain AM393_RS12945 PF08525 Opacity-associated protein A N-terminal motif AM393_RS12945 PF04225 Opacity-associated protein A LysM-like domain AM393_RS12950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM393_RS12950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM393_RS12955 PF00324 Amino acid permease AM393_RS12960 PF01814 Hemerythrin HHE cation binding domain AM393_RS12960 PF04405 Domain of Unknown function (DUF542) AM393_RS12965 PF00892 EamA-like transporter family AM393_RS12970 PF12833 Helix-turn-helix domain AM393_RS12975 PF05368 NmrA-like family AM393_RS12980 PF01638 HxlR-like helix-turn-helix AM393_RS12985 PF02872 5'-nucleotidase, C-terminal domain AM393_RS12985 PF00149 Calcineurin-like phosphoesterase AM393_RS12990 PF00459 Inositol monophosphatase family AM393_RS12995 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM393_RS13000 PF06526 Protein of unknown function (DUF1107) AM393_RS13010 PF00571 CBS domain AM393_RS13010 PF01595 Cyclin M transmembrane N-terminal domain AM393_RS13010 PF03471 Transporter associated domain AM393_RS13015 PF01625 Peptide methionine sulfoxide reductase AM393_RS13020 PF01103 Surface antigen AM393_RS13020 PF07244 Surface antigen variable number repeat AM393_RS13020 PF17243 POTRA domain TamA domain 1 AM393_RS13025 PF04357 TamB, inner membrane protein subunit of TAM complex AM393_RS13030 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM393_RS13045 PF00719 Inorganic pyrophosphatase AM393_RS13050 PF13407 Periplasmic binding protein domain AM393_RS13055 PF00005 ABC transporter AM393_RS13060 PF02653 Branched-chain amino acid transport system / permease component AM393_RS13065 PF02653 Branched-chain amino acid transport system / permease component AM393_RS13070 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM393_RS13075 PF01225 Mur ligase family, catalytic domain AM393_RS13075 PF08245 Mur ligase middle domain AM393_RS13075 PF02875 Mur ligase family, glutamate ligase domain AM393_RS13090 PF04751 Protein of unknown function (DUF615) AM393_RS13095 PF01523 Putative modulator of DNA gyrase AM393_RS13100 PF07361 Cytochrome b562 AM393_RS13130 PF01979 Amidohydrolase family AM393_RS13135 PF03841 L-seryl-tRNA selenium transferase AM393_RS13140 PF07071 KDGP aldolase AM393_RS13145 PF10282 Lactonase, 7-bladed beta-propeller AM393_RS13150 PF05043 Mga helix-turn-helix domain AM393_RS13150 PF08279 HTH domain AM393_RS13150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS13150 PF00874 PRD domain AM393_RS13155 PF04221 RelB antitoxin AM393_RS13160 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM393_RS13170 PF03477 ATP cone domain AM393_RS13170 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM393_RS13180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS13185 PF02056 Family 4 glycosyl hydrolase AM393_RS13185 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS13190 PF02378 Phosphotransferase system, EIIC AM393_RS13195 PF00128 Alpha amylase, catalytic domain AM393_RS13195 PF11941 Domain of unknown function (DUF3459) AM393_RS13200 PF00367 phosphotransferase system, EIIB AM393_RS13200 PF02378 Phosphotransferase system, EIIC AM393_RS13205 PF00356 Bacterial regulatory proteins, lacI family AM393_RS13215 PF00690 Cation transporter/ATPase, N-terminus AM393_RS13215 PF00689 Cation transporting ATPase, C-terminus AM393_RS13220 PF01042 Endoribonuclease L-PSP AM393_RS13225 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM393_RS13225 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM393_RS13230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM393_RS13230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM393_RS13240 PF04074 YhcH/YjgK/YiaL AM393_RS13245 PF01380 SIS domain AM393_RS13250 PF00294 pfkB family carbohydrate kinase AM393_RS13255 PF01979 Amidohydrolase family AM393_RS13260 PF03606 C4-dicarboxylate anaerobic carrier AM393_RS13265 PF07702 UTRA domain AM393_RS13265 PF00392 Bacterial regulatory proteins, gntR family AM393_RS13270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM393_RS13270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM393_RS13275 PF06877 Regulator of ribonuclease activity B AM393_RS13280 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM393_RS13285 PF00583 Acetyltransferase (GNAT) family AM393_RS13290 PF08264 Anticodon-binding domain of tRNA AM393_RS13290 PF00133 tRNA synthetases class I (I, L, M and V) AM393_RS13290 PF10458 Valyl tRNA synthetase tRNA binding arm AM393_RS13295 PF04364 DNA polymerase III chi subunit, HolC AM393_RS13300 PF00883 Cytosol aminopeptidase family, catalytic domain AM393_RS13300 PF02789 Cytosol aminopeptidase family, N-terminal domain AM393_RS13310 PF03739 Lipopolysaccharide export system permease LptF/LptG AM393_RS13315 PF03739 Lipopolysaccharide export system permease LptF/LptG AM393_RS13320 PF05872 Bacterial protein of unknown function (DUF853) AM393_RS13330 PF00171 Aldehyde dehydrogenase family AM393_RS13335 PF04962 KduI/IolB family AM393_RS13370 PF01380 SIS domain AM393_RS13370 PF01418 Helix-turn-helix domain, rpiR family AM393_RS13370 PF02685 Glucokinase AM393_RS13375 PF00294 pfkB family carbohydrate kinase AM393_RS13380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS13380 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS13380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS13385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS13385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS13390 PF01261 Xylose isomerase-like TIM barrel AM393_RS13395 PF01261 Xylose isomerase-like TIM barrel AM393_RS13400 PF13416 Bacterial extracellular solute-binding protein AM393_RS13405 PF00005 ABC transporter AM393_RS13405 PF17912 MalK OB fold domain AM393_RS13410 PF00149 Calcineurin-like phosphoesterase AM393_RS13415 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS13420 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS13425 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS13425 PF00107 Zinc-binding dehydrogenase AM393_RS13430 PF01740 STAS domain AM393_RS13430 PF00916 Sulfate permease family AM393_RS13435 PF00484 Carbonic anhydrase AM393_RS13450 PF00589 Phage integrase family AM393_RS13450 PF13356 Arm DNA-binding domain AM393_RS13475 PF04606 Ogr/Delta-like zinc finger AM393_RS13500 PF17345 Family of unknown function (DUF5375) AM393_RS13515 PF13087 AAA domain AM393_RS13515 PF13091 PLD-like domain AM393_RS13560 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AM393_RS13560 PF04616 Glycosyl hydrolases family 43 AM393_RS13575 PF02264 LamB porin AM393_RS13580 PF08349 Protein of unknown function (DUF1722) AM393_RS13615 PF00106 short chain dehydrogenase AM393_RS13625 PF13411 MerR HTH family regulatory protein AM393_RS13630 PF08212 Lipocalin-like domain AM393_RS13640 PF00873 AcrB/AcrD/AcrF family AM393_RS13645 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS13645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS13650 PF11604 Copper binding periplasmic protein CusF AM393_RS13655 PF02321 Outer membrane efflux protein AM393_RS13665 PF00486 Transcriptional regulatory protein, C terminal AM393_RS13665 PF00072 Response regulator receiver domain AM393_RS13670 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS13670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS13670 PF00672 HAMP domain AM393_RS13685 PF08007 Cupin superfamily protein AM393_RS13720 PF00005 ABC transporter AM393_RS13725 PF13533 Biotin-lipoyl like AM393_RS13730 PF00579 tRNA synthetases class I (W and Y) AM393_RS13735 PF13407 Periplasmic binding protein domain AM393_RS13740 PF00005 ABC transporter AM393_RS13745 PF02653 Branched-chain amino acid transport system / permease component AM393_RS13750 PF02653 Branched-chain amino acid transport system / permease component AM393_RS13755 PF02525 Flavodoxin-like fold AM393_RS13760 PF03466 LysR substrate binding domain AM393_RS13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS13765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM393_RS13770 PF00392 Bacterial regulatory proteins, gntR family AM393_RS13770 PF00155 Aminotransferase class I and II AM393_RS13775 PF06568 Domain of unknown function (DUF1127) AM393_RS13785 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS13785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS13795 PF11823 Protein of unknown function (DUF3343) AM393_RS13800 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM393_RS13805 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AM393_RS13815 PF07690 Major Facilitator Superfamily AM393_RS13820 PF04286 Protein of unknown function (DUF445) AM393_RS13830 PF12833 Helix-turn-helix domain AM393_RS13830 PF02311 AraC-like ligand binding domain AM393_RS13840 PF04754 Putative transposase, YhgA-like AM393_RS13845 PF00171 Aldehyde dehydrogenase family AM393_RS13855 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM393_RS13855 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM393_RS13860 PF04328 Selenoprotein, putative AM393_RS13865 PF13722 5TM C-terminal transporter carbon starvation CstA AM393_RS13865 PF02554 Carbon starvation protein CstA AM393_RS13880 PF01613 Flavin reductase like domain AM393_RS13885 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AM393_RS13885 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AM393_RS13890 PF12833 Helix-turn-helix domain AM393_RS13895 PF07690 Major Facilitator Superfamily AM393_RS13900 PF03328 HpcH/HpaI aldolase/citrate lyase family AM393_RS13905 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM393_RS13910 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AM393_RS13915 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM393_RS13920 PF00171 Aldehyde dehydrogenase family AM393_RS13925 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM393_RS13930 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM393_RS13940 PF01047 MarR family AM393_RS13955 PF02615 Malate/L-lactate dehydrogenase AM393_RS13970 PF07969 Amidohydrolase family AM393_RS13985 PF05035 2-keto-3-deoxy-galactonokinase AM393_RS13990 PF01081 KDPG and KHG aldolase AM393_RS13995 PF01380 SIS domain AM393_RS13995 PF01418 Helix-turn-helix domain, rpiR family AM393_RS14000 PF00583 Acetyltransferase (GNAT) family AM393_RS14005 PF00814 Glycoprotease family AM393_RS14005 PF00583 Acetyltransferase (GNAT) family AM393_RS14010 PF07690 Major Facilitator Superfamily AM393_RS14015 PF07729 FCD domain AM393_RS14015 PF00392 Bacterial regulatory proteins, gntR family AM393_RS14020 PF00107 Zinc-binding dehydrogenase AM393_RS14020 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS14025 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS14025 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS14030 PF00874 PRD domain AM393_RS14030 PF03610 PTS system fructose IIA component AM393_RS14030 PF00158 Sigma-54 interaction domain AM393_RS14035 PF03830 PTS system sorbose subfamily IIB component AM393_RS14035 PF03610 PTS system fructose IIA component AM393_RS14040 PF03830 PTS system sorbose subfamily IIB component AM393_RS14045 PF03609 PTS system sorbose-specific iic component AM393_RS14050 PF03613 PTS system mannose/fructose/sorbose family IID component AM393_RS14055 PF01380 SIS domain AM393_RS14060 PF01380 SIS domain AM393_RS14065 PF04754 Putative transposase, YhgA-like AM393_RS14070 PF00884 Sulfatase AM393_RS14075 PF10696 Protein of unknown function (DUF2501) AM393_RS14080 PF01695 IstB-like ATP binding protein AM393_RS14085 PF17948 DnaT DNA-binding domain AM393_RS14090 PF12821 Threonine/Serine exporter, ThrE AM393_RS14095 PF06738 Putative threonine/serine exporter AM393_RS14105 PF01494 FAD binding domain AM393_RS14115 PF00196 Bacterial regulatory proteins, luxR family AM393_RS14120 PF00196 Bacterial regulatory proteins, luxR family AM393_RS14125 PF04073 Aminoacyl-tRNA editing domain AM393_RS14130 PF02378 Phosphotransferase system, EIIC AM393_RS14130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS14135 PF06276 Ferric iron reductase FhuF-like transporter AM393_RS14135 PF11575 FhuF 2Fe-2S C-terminal domain AM393_RS14140 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS14145 PF07256 Protein of unknown function (DUF1435) AM393_RS14165 PF08468 Methyltransferase small domain N-terminal AM393_RS14165 PF05175 Methyltransferase small domain AM393_RS14170 PF03603 DNA polymerase III psi subunit AM393_RS14175 PF00583 Acetyltransferase (GNAT) family AM393_RS14180 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS14185 PF16658 Class II release factor RF3, C-terminal domain AM393_RS14185 PF03144 Elongation factor Tu domain 2 AM393_RS14185 PF00009 Elongation factor Tu GTP binding domain AM393_RS14190 PF04972 BON domain AM393_RS14195 PF07043 Protein of unknown function (DUF1328) AM393_RS14200 PF01734 Patatin-like phospholipase AM393_RS14205 PF01026 TatD related DNase AM393_RS14210 PF07662 Na+ dependent nucleoside transporter C-terminus AM393_RS14210 PF01773 Na+ dependent nucleoside transporter N-terminus AM393_RS14210 PF07670 Nucleoside recognition AM393_RS14215 PF01791 DeoC/LacD family aldolase AM393_RS14220 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM393_RS14220 PF00591 Glycosyl transferase family, a/b domain AM393_RS14220 PF02885 Glycosyl transferase family, helical bundle domain AM393_RS14225 PF01676 Metalloenzyme superfamily AM393_RS14230 PF01048 Phosphorylase superfamily AM393_RS14235 PF10437 Bacterial lipoate protein ligase C-terminus AM393_RS14235 PF03099 Biotin/lipoate A/B protein ligase family AM393_RS14240 PF10144 Bacterial virulence factor haemolysin AM393_RS14250 PF18429 Domain of unknown function (DUF5609) AM393_RS14255 PF18073 Rubredoxin metal binding domain AM393_RS14260 PF01381 Helix-turn-helix AM393_RS14260 PF13521 AAA domain AM393_RS14265 PF12848 ABC transporter AM393_RS14265 PF00005 ABC transporter AM393_RS14275 PF14718 Soluble lytic murein transglycosylase L domain AM393_RS14275 PF01464 Transglycosylase SLT domain AM393_RS14280 PF01371 Trp repressor protein AM393_RS14285 PF01931 Protein of unknown function DUF84 AM393_RS14290 PF00300 Histidine phosphatase superfamily (branch 1) AM393_RS14295 PF06445 GyrI-like small molecule binding domain AM393_RS14295 PF12833 Helix-turn-helix domain AM393_RS14300 PF05981 CreA protein AM393_RS14305 PF00072 Response regulator receiver domain AM393_RS14305 PF00486 Transcriptional regulatory protein, C terminal AM393_RS14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS14310 PF00672 HAMP domain AM393_RS14310 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS14315 PF06123 Inner membrane protein CreD AM393_RS14320 PF00072 Response regulator receiver domain AM393_RS14320 PF00486 Transcriptional regulatory protein, C terminal AM393_RS14335 PF00588 SpoU rRNA Methylase family AM393_RS14340 PF08254 Threonine leader peptide AM393_RS14345 PF01842 ACT domain AM393_RS14345 PF03447 Homoserine dehydrogenase, NAD binding domain AM393_RS14345 PF00742 Homoserine dehydrogenase AM393_RS14345 PF00696 Amino acid kinase family AM393_RS14345 PF13840 ACT domain AM393_RS14350 PF08544 GHMP kinases C terminal AM393_RS14350 PF00288 GHMP kinases N terminal domain AM393_RS14355 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS14355 PF14821 Threonine synthase N terminus AM393_RS14365 PF03883 Peroxide stress protein YaaA AM393_RS14370 PF01235 Sodium:alanine symporter family AM393_RS14375 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM393_RS14380 PF00994 Probable molybdopterin binding domain AM393_RS14385 PF07690 Major Facilitator Superfamily AM393_RS14390 PF01184 GPR1/FUN34/yaaH family AM393_RS14395 PF03981 Ubiquinol-cytochrome C chaperone AM393_RS14395 PF13099 Domain of unknown function (DUF3944) AM393_RS14400 PF10807 Protein of unknown function (DUF2541) AM393_RS14405 PF00012 Hsp70 protein AM393_RS14410 PF00684 DnaJ central domain AM393_RS14410 PF00226 DnaJ domain AM393_RS14410 PF01556 DnaJ C terminal domain AM393_RS14415 PF06965 Na+/H+ antiporter 1 AM393_RS14420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS14420 PF03466 LysR substrate binding domain AM393_RS14425 PF01649 Ribosomal protein S20 AM393_RS14440 PF01687 Riboflavin kinase AM393_RS14440 PF06574 FAD synthetase AM393_RS14445 PF06827 Zinc finger found in FPG and IleRS AM393_RS14445 PF00133 tRNA synthetases class I (I, L, M and V) AM393_RS14445 PF08264 Anticodon-binding domain of tRNA AM393_RS14450 PF01252 Signal peptidase (SPase) II AM393_RS14455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM393_RS14460 PF02401 LytB protein AM393_RS14465 PF01156 Inosine-uridine preferring nucleoside hydrolase AM393_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS14475 PF03466 LysR substrate binding domain AM393_RS14480 PF02272 DHHA1 domain AM393_RS14480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM393_RS14480 PF01411 tRNA synthetases class II (A) AM393_RS14485 PF12431 Transcriptional regulator AM393_RS14485 PF00072 Response regulator receiver domain AM393_RS14490 PF17203 Single cache domain 3 AM393_RS14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS14495 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AM393_RS14500 PF02436 Conserved carboxylase domain AM393_RS14500 PF00682 HMGL-like AM393_RS14500 PF00364 Biotin-requiring enzyme AM393_RS14505 PF04277 Oxaloacetate decarboxylase, gamma chain AM393_RS14510 PF03390 2-hydroxycarboxylate transporter family AM393_RS14515 PF00583 Acetyltransferase (GNAT) family AM393_RS14515 PF08218 Citrate lyase ligase C-terminal domain AM393_RS14520 PF06857 Malonate decarboxylase delta subunit (MdcD) AM393_RS14525 PF03328 HpcH/HpaI aldolase/citrate lyase family AM393_RS14530 PF04223 Citrate lyase, alpha subunit (CitF) AM393_RS14535 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM393_RS14540 PF05173 Dihydrodipicolinate reductase, C-terminus AM393_RS14540 PF01113 Dihydrodipicolinate reductase, N-terminus AM393_RS14550 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM393_RS14550 PF00117 Glutamine amidotransferase class-I AM393_RS14555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM393_RS14555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM393_RS14555 PF02142 MGS-like domain AM393_RS14560 PF06004 Bacterial protein of unknown function (DUF903) AM393_RS14565 PF02525 Flavodoxin-like fold AM393_RS14570 PF02254 TrkA-N domain AM393_RS14570 PF00999 Sodium/hydrogen exchanger family AM393_RS14580 PF00186 Dihydrofolate reductase AM393_RS14590 PF00149 Calcineurin-like phosphoesterase AM393_RS14595 PF04379 ApaG domain AM393_RS14600 PF00398 Ribosomal RNA adenine dimethylase AM393_RS14605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM393_RS14610 PF00639 PPIC-type PPIASE domain AM393_RS14610 PF09312 SurA N-terminal domain AM393_RS14615 PF04453 LPS transport system D AM393_RS14615 PF03968 OstA-like protein AM393_RS14620 PF05099 Tellurite resistance protein TerB AM393_RS14620 PF00226 DnaJ domain AM393_RS14625 PF12431 Transcriptional regulator AM393_RS14625 PF00072 Response regulator receiver domain AM393_RS14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS14630 PF17203 Single cache domain 3 AM393_RS14635 PF03390 2-hydroxycarboxylate transporter family AM393_RS14645 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM393_RS14650 PF00849 RNA pseudouridylate synthase AM393_RS14655 PF18337 RapA N-terminal Tudor like domain AM393_RS14655 PF00271 Helicase conserved C-terminal domain AM393_RS14655 PF12137 RNA polymerase recycling family C-terminal AM393_RS14655 PF00176 SNF2 family N-terminal domain AM393_RS14655 PF18339 RapA N-terminal Tudor like domain 1 AM393_RS14660 PF03104 DNA polymerase family B, exonuclease domain AM393_RS14660 PF00136 DNA polymerase family B AM393_RS14665 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS14670 PF02610 L-arabinose isomerase AM393_RS14670 PF11762 L-arabinose isomerase C-terminal domain AM393_RS14675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS14680 PF02311 AraC-like ligand binding domain AM393_RS14680 PF12833 Helix-turn-helix domain AM393_RS14685 PF09335 SNARE associated Golgi protein AM393_RS14690 PF00005 ABC transporter AM393_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS14705 PF12793 Sugar transport-related sRNA regulator N-term AM393_RS14705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS14715 PF07690 Major Facilitator Superfamily AM393_RS14720 PF07690 Major Facilitator Superfamily AM393_RS14725 PF03466 LysR substrate binding domain AM393_RS14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS14730 PF01487 Type I 3-dehydroquinase AM393_RS14735 PF07690 Major Facilitator Superfamily AM393_RS14740 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM393_RS14740 PF08501 Shikimate dehydrogenase substrate binding domain AM393_RS14745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS14745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM393_RS14750 PF00694 Aconitase C-terminal domain AM393_RS14755 PF00330 Aconitase family (aconitate hydratase) AM393_RS14760 PF00180 Isocitrate/isopropylmalate dehydrogenase AM393_RS14765 PF08502 LeuA allosteric (dimerisation) domain AM393_RS14765 PF00682 HMGL-like AM393_RS14775 PF03466 LysR substrate binding domain AM393_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS14785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS14785 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS14785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS14790 PF10369 Small subunit of acetolactate synthase AM393_RS14795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM393_RS14795 PF00356 Bacterial regulatory proteins, lacI family AM393_RS14805 PF02381 MraZ protein, putative antitoxin-like AM393_RS14810 PF01795 MraW methylase family AM393_RS14815 PF04999 Cell division protein FtsL AM393_RS14820 PF03717 Penicillin-binding Protein dimerisation domain AM393_RS14820 PF00905 Penicillin binding protein transpeptidase domain AM393_RS14825 PF01225 Mur ligase family, catalytic domain AM393_RS14825 PF02875 Mur ligase family, glutamate ligase domain AM393_RS14825 PF08245 Mur ligase middle domain AM393_RS14830 PF08245 Mur ligase middle domain AM393_RS14830 PF02875 Mur ligase family, glutamate ligase domain AM393_RS14830 PF01225 Mur ligase family, catalytic domain AM393_RS14835 PF00953 Glycosyl transferase family 4 AM393_RS14835 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM393_RS14840 PF08245 Mur ligase middle domain AM393_RS14840 PF02875 Mur ligase family, glutamate ligase domain AM393_RS14845 PF01098 Cell cycle protein AM393_RS14850 PF04101 Glycosyltransferase family 28 C-terminal domain AM393_RS14850 PF03033 Glycosyltransferase family 28 N-terminal domain AM393_RS14855 PF02875 Mur ligase family, glutamate ligase domain AM393_RS14855 PF08245 Mur ligase middle domain AM393_RS14855 PF01225 Mur ligase family, catalytic domain AM393_RS14860 PF07478 D-ala D-ala ligase C-terminus AM393_RS14860 PF01820 D-ala D-ala ligase N-terminus AM393_RS14865 PF08478 POTRA domain, FtsQ-type AM393_RS14865 PF03799 Cell division protein FtsQ AM393_RS14870 PF02491 SHS2 domain inserted in FTSA AM393_RS14875 PF00091 Tubulin/FtsZ family, GTPase domain AM393_RS14875 PF12327 FtsZ family, C-terminal domain AM393_RS14880 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM393_RS14885 PF06558 Secretion monitor precursor protein (SecM) AM393_RS14890 PF02810 SEC-C motif AM393_RS14890 PF07517 SecA DEAD-like domain AM393_RS14890 PF01043 SecA preprotein cross-linking domain AM393_RS14890 PF07516 SecA Wing and Scaffold domain AM393_RS14895 PF00293 NUDIX domain AM393_RS14900 PF03884 DNA gyrase inhibitor YacG AM393_RS14905 PF07072 Cell division protein AM393_RS14910 PF01121 Dephospho-CoA kinase AM393_RS14915 PF00478 IMP dehydrogenase / GMP reductase domain AM393_RS14920 PF00482 Type II secretion system (T2SS), protein F AM393_RS14925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM393_RS14925 PF00437 Type II/IV secretion system protein AM393_RS14930 PF07963 Prokaryotic N-terminal methylation motif AM393_RS14935 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM393_RS14935 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM393_RS14940 PF01510 N-acetylmuramoyl-L-alanine amidase AM393_RS14945 PF17113 Regulatory signalling modulator protein AmpE AM393_RS14950 PF04616 Glycosyl hydrolases family 43 AM393_RS14950 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AM393_RS14960 PF00324 Amino acid permease AM393_RS14965 PF00392 Bacterial regulatory proteins, gntR family AM393_RS14965 PF07729 FCD domain AM393_RS14970 PF17831 Pyruvate dehydrogenase E1 component middle domain AM393_RS14970 PF00456 Transketolase, thiamine diphosphate binding domain AM393_RS14975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM393_RS14975 PF00364 Biotin-requiring enzyme AM393_RS14975 PF02817 e3 binding domain AM393_RS14980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM393_RS14980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS14995 PF11737 Protein of unknown function (DUF3300) AM393_RS15005 PF11791 Aconitate B N-terminal domain AM393_RS15005 PF00330 Aconitase family (aconitate hydratase) AM393_RS15005 PF06434 Aconitate hydratase 2 N-terminus AM393_RS15010 PF06062 Uncharacterised protein family (UPF0231) AM393_RS15015 PF02675 S-adenosylmethionine decarboxylase AM393_RS15020 PF17284 Spermidine synthase tetramerisation domain AM393_RS15045 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM393_RS15050 PF07732 Multicopper oxidase AM393_RS15050 PF07731 Multicopper oxidase AM393_RS15050 PF00394 Multicopper oxidase AM393_RS15055 PF01011 PQQ enzyme repeat AM393_RS15060 PF00156 Phosphoribosyl transferase domain AM393_RS15065 PF00484 Carbonic anhydrase AM393_RS15070 PF00005 ABC transporter AM393_RS15075 PF01061 ABC-2 type transporter AM393_RS15080 PF03610 PTS system fructose IIA component AM393_RS15085 PF01522 Polysaccharide deacetylase AM393_RS15090 PF02261 Aspartate decarboxylase AM393_RS15095 PF02569 Pantoate-beta-alanine ligase AM393_RS15100 PF02548 Ketopantoate hydroxymethyltransferase AM393_RS15105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM393_RS15110 PF12627 Probable RNA and SrmB- binding site of polymerase A AM393_RS15110 PF12626 Polymerase A arginine-rich C-terminus AM393_RS15110 PF01743 Poly A polymerase head domain AM393_RS15115 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM393_RS15120 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM393_RS15125 PF17746 SfsA N-terminal OB domain AM393_RS15125 PF03749 Sugar fermentation stimulation protein RE domain AM393_RS15130 PF02834 LigT like Phosphoesterase AM393_RS15135 PF00270 DEAD/DEAH box helicase AM393_RS15135 PF04408 Helicase associated domain (HA2) AM393_RS15135 PF08482 ATP-dependent helicase C-terminal AM393_RS15135 PF00271 Helicase conserved C-terminal domain AM393_RS15140 PF01478 Type IV leader peptidase family AM393_RS15140 PF06750 Bacterial Peptidase A24 N-terminal domain AM393_RS15145 PF01203 Type II secretion system (T2SS), protein N AM393_RS15150 PF04612 Type II secretion system (T2SS), protein M AM393_RS15155 PF05134 Type II secretion system (T2SS), protein L AM393_RS15155 PF12693 GspL periplasmic domain AM393_RS15160 PF03934 Type II secretion system (T2SS), protein K AM393_RS15165 PF11612 Type II secretion system (T2SS), protein J AM393_RS15165 PF07963 Prokaryotic N-terminal methylation motif AM393_RS15170 PF02501 Type II secretion system (T2SS), protein I AM393_RS15170 PF07963 Prokaryotic N-terminal methylation motif AM393_RS15175 PF07963 Prokaryotic N-terminal methylation motif AM393_RS15180 PF08334 Type II secretion system (T2SS), protein G AM393_RS15180 PF07963 Prokaryotic N-terminal methylation motif AM393_RS15185 PF00482 Type II secretion system (T2SS), protein F AM393_RS15190 PF00437 Type II/IV secretion system protein AM393_RS15195 PF03958 Bacterial type II/III secretion system short domain AM393_RS15195 PF00263 Bacterial type II and III secretion system protein AM393_RS15200 PF11356 Type II secretion system protein C AM393_RS15205 PF18494 Pullulanase Ins domain AM393_RS15205 PF03714 Bacterial pullanase-associated domain AM393_RS15205 PF11852 Domain of unknown function (DUF3372) AM393_RS15205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM393_RS15205 PF17967 Pullulanase N2 domain AM393_RS15210 PF16537 Type II secretion system protein B AM393_RS15215 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM393_RS15225 PF00905 Penicillin binding protein transpeptidase domain AM393_RS15225 PF00912 Transglycosylase AM393_RS15225 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM393_RS15225 PF14814 Bifunctional transglycosylase second domain AM393_RS15230 PF07715 TonB-dependent Receptor Plug Domain AM393_RS15230 PF00593 TonB dependent receptor AM393_RS15235 PF00005 ABC transporter AM393_RS15240 PF01497 Periplasmic binding protein AM393_RS15245 PF01032 FecCD transport family AM393_RS15250 PF00202 Aminotransferase class-III AM393_RS15255 PF00654 Voltage gated chloride channel AM393_RS15260 PF01521 Iron-sulphur cluster biosynthesis AM393_RS15265 PF03458 UPF0126 domain AM393_RS15270 PF01497 Periplasmic binding protein AM393_RS15275 PF01048 Phosphorylase superfamily AM393_RS15280 PF13286 Phosphohydrolase-associated domain AM393_RS15280 PF01966 HD domain AM393_RS15285 PF00595 PDZ domain AM393_RS15290 PF05651 Putative sugar diacid recognition AM393_RS15290 PF17853 GGDEF-like domain AM393_RS15290 PF13556 PucR C-terminal helix-turn-helix domain AM393_RS15295 PF11944 Protein of unknown function (DUF3461) AM393_RS15300 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM393_RS15300 PF14602 Hexapeptide repeat of succinyl-transferase AM393_RS15300 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS15305 PF01966 HD domain AM393_RS15305 PF01842 ACT domain AM393_RS15305 PF01909 Nucleotidyltransferase domain AM393_RS15305 PF08335 GlnD PII-uridylyltransferase AM393_RS15310 PF00557 Metallopeptidase family M24 AM393_RS15315 PF00318 Ribosomal protein S2 AM393_RS15320 PF00889 Elongation factor TS AM393_RS15325 PF00696 Amino acid kinase family AM393_RS15330 PF01765 Ribosome recycling factor AM393_RS15335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM393_RS15335 PF13288 DXP reductoisomerase C-terminal domain AM393_RS15335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM393_RS15345 PF01255 Putative undecaprenyl diphosphate synthase AM393_RS15355 PF02163 Peptidase family M50 AM393_RS15355 PF17820 PDZ domain AM393_RS15360 PF01103 Surface antigen AM393_RS15360 PF07244 Surface antigen variable number repeat AM393_RS15365 PF03938 Outer membrane protein (OmpH-like) AM393_RS15370 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS15370 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM393_RS15375 PF07977 FabA-like domain AM393_RS15380 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS15380 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM393_RS15385 PF02684 Lipid-A-disaccharide synthetase AM393_RS15390 PF01351 Ribonuclease HII AM393_RS15395 PF14579 Helix-hairpin-helix motif AM393_RS15395 PF02811 PHP domain AM393_RS15395 PF01336 OB-fold nucleic acid binding domain AM393_RS15395 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM393_RS15395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM393_RS15400 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM393_RS15405 PF01276 Orn/Lys/Arg decarboxylase, major domain AM393_RS15405 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM393_RS15405 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM393_RS15410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM393_RS15415 PF11734 TilS substrate C-terminal domain AM393_RS15415 PF01171 PP-loop family AM393_RS15415 PF09179 TilS substrate binding domain AM393_RS15420 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM393_RS15425 PF06786 Uncharacterised protein family (UPF0253) AM393_RS15430 PF07152 YaeQ protein AM393_RS15435 PF00472 RF-1 domain AM393_RS15440 PF04170 NlpE N-terminal domain AM393_RS15440 PF17185 NlpE C-terminal OB domain AM393_RS15445 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM393_RS15450 PF04073 Aminoacyl-tRNA editing domain AM393_RS15450 PF03129 Anticodon binding domain AM393_RS15450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM393_RS15455 PF01980 tRNA-methyltransferase O AM393_RS15455 PF18389 TrmO C-terminal domain AM393_RS15460 PF16358 RcsF lipoprotein AM393_RS15465 PF03180 NLPA lipoprotein AM393_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS15475 PF00005 ABC transporter AM393_RS15475 PF09383 NIL domain AM393_RS15515 PF00248 Aldo/keto reductase family AM393_RS15520 PF03466 LysR substrate binding domain AM393_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS15525 PF07690 Major Facilitator Superfamily AM393_RS15530 PF03372 Endonuclease/Exonuclease/phosphatase family AM393_RS15535 PF08241 Methyltransferase domain AM393_RS15540 PF01476 LysM domain AM393_RS15540 PF01464 Transglycosylase SLT domain AM393_RS15545 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM393_RS15545 PF00753 Metallo-beta-lactamase superfamily AM393_RS15550 PF08241 Methyltransferase domain AM393_RS15555 PF00075 RNase H AM393_RS15560 PF00929 Exonuclease AM393_RS15570 PF03466 LysR substrate binding domain AM393_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS15575 PF01810 LysE type translocator AM393_RS15580 PF00795 Carbon-nitrogen hydrolase AM393_RS15585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM393_RS15585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM393_RS15585 PF02770 Acyl-CoA dehydrogenase, middle domain AM393_RS15585 PF09317 Domain of unknown function (DUF1974) AM393_RS15590 PF13580 SIS domain AM393_RS15595 PF13230 Glutamine amidotransferases class-II AM393_RS15600 PF03734 L,D-transpeptidase catalytic domain AM393_RS15610 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AM393_RS15610 PF11973 NQRA C-terminal domain AM393_RS15615 PF03116 NQR2, RnfD, RnfE family AM393_RS15620 PF04205 FMN-binding domain AM393_RS15625 PF02508 Rnf-Nqr subunit, membrane protein AM393_RS15630 PF02508 Rnf-Nqr subunit, membrane protein AM393_RS15635 PF00970 Oxidoreductase FAD-binding domain AM393_RS15635 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS15635 PF00175 Oxidoreductase NAD-binding domain AM393_RS15640 PF04400 (Na+)-NQR maturation NqrM AM393_RS15645 PF03009 Glycerophosphoryl diester phosphodiesterase family AM393_RS15650 PF00817 impB/mucB/samB family AM393_RS15650 PF11799 impB/mucB/samB family C-terminal domain AM393_RS15650 PF11798 IMS family HHH motif AM393_RS15655 PF13673 Acetyltransferase (GNAT) domain AM393_RS15660 PF07687 Peptidase dimerisation domain AM393_RS15660 PF01546 Peptidase family M20/M25/M40 AM393_RS15665 PF00156 Phosphoribosyl transferase domain AM393_RS15670 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM393_RS15675 PF07417 Sigma factor-binding transcriptional regulator Crl AM393_RS15680 PF00392 Bacterial regulatory proteins, gntR family AM393_RS15680 PF07729 FCD domain AM393_RS15685 PF00324 Amino acid permease AM393_RS15690 PF00202 Aminotransferase class-III AM393_RS15695 PF00171 Aldehyde dehydrogenase family AM393_RS15700 PF01266 FAD dependent oxidoreductase AM393_RS15705 PF08943 CsiD AM393_RS15715 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM393_RS15720 PF13847 Methyltransferase domain AM393_RS15725 PF13417 Glutathione S-transferase, N-terminal domain AM393_RS15725 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS15730 PF03611 PTS system sugar-specific permease component AM393_RS15735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS15735 PF01842 ACT domain AM393_RS15735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM393_RS15745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS15745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS15755 PF01791 DeoC/LacD family aldolase AM393_RS15770 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS15770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM393_RS15775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM393_RS15775 PF02817 e3 binding domain AM393_RS15775 PF00364 Biotin-requiring enzyme AM393_RS15780 PF02780 Transketolase, C-terminal domain AM393_RS15780 PF02779 Transketolase, pyrimidine binding domain AM393_RS15785 PF00676 Dehydrogenase E1 component AM393_RS15790 PF00069 Protein kinase domain AM393_RS15790 PF13191 AAA ATPase domain AM393_RS15805 PF17345 Family of unknown function (DUF5375) AM393_RS15830 PF04606 Ogr/Delta-like zinc finger AM393_RS15845 PF13614 AAA domain AM393_RS15850 PF13356 Arm DNA-binding domain AM393_RS15850 PF14659 Phage integrase, N-terminal SAM-like domain AM393_RS15850 PF00589 Phage integrase family AM393_RS15860 PF00171 Aldehyde dehydrogenase family AM393_RS15865 PF01472 PUA domain AM393_RS15865 PF00696 Amino acid kinase family AM393_RS15870 PF00267 Gram-negative porin AM393_RS15875 PF00877 NlpC/P60 family AM393_RS15900 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS15905 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS15915 PF00005 ABC transporter AM393_RS15920 PF00196 Bacterial regulatory proteins, luxR family AM393_RS15925 PF16449 Fimbrillin MatB AM393_RS15930 PF18649 EcpB C-terminal domain AM393_RS15935 PF15976 CS1-pili formation C-terminal AM393_RS15935 PF16967 E-set like domain AM393_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS15955 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS15960 PF00005 ABC transporter AM393_RS15965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS15975 PF00005 ABC transporter AM393_RS15980 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM393_RS15980 PF00005 ABC transporter AM393_RS15985 PF02653 Branched-chain amino acid transport system / permease component AM393_RS15985 PF11862 Domain of unknown function (DUF3382) AM393_RS15990 PF02653 Branched-chain amino acid transport system / permease component AM393_RS15995 PF13458 Periplasmic binding protein AM393_RS16000 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM393_RS16005 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM393_RS16010 PF00324 Amino acid permease AM393_RS16015 PF00324 Amino acid permease AM393_RS16020 PF02574 Homocysteine S-methyltransferase AM393_RS16025 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM393_RS16030 PF00005 ABC transporter AM393_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS16040 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM393_RS16050 PF00490 Delta-aminolevulinic acid dehydratase AM393_RS16055 PF00144 Beta-lactamase AM393_RS16060 PF00857 Isochorismatase family AM393_RS16065 PF05992 SbmA/BacA-like family AM393_RS16070 PF07759 Protein of unknown function (DUF1615) AM393_RS16075 PF10954 Protein of unknown function (DUF2755) AM393_RS16080 PF10953 Protein of unknown function (DUF2754) AM393_RS16085 PF01820 D-ala D-ala ligase N-terminus AM393_RS16085 PF07478 D-ala D-ala ligase C-terminus AM393_RS16095 PF07690 Major Facilitator Superfamily AM393_RS16100 PF10796 Sigma-S stabilisation anti-adaptor protein AM393_RS16105 PF00245 Alkaline phosphatase AM393_RS16110 PF07769 psiF repeat AM393_RS16115 PF03807 NADP oxidoreductase coenzyme F420-dependent AM393_RS16115 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM393_RS16120 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM393_RS16125 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AM393_RS16130 PF01202 Shikimate kinase AM393_RS16135 PF16362 YaiA protein AM393_RS16140 PF07302 AroM protein AM393_RS16145 PF06865 Pyrimidine/purine nucleoside phosphorylase AM393_RS16150 PF04381 Putative exonuclease, RdgC AM393_RS16155 PF00480 ROK family AM393_RS16160 PF13476 AAA domain AM393_RS16165 PF00149 Calcineurin-like phosphoesterase AM393_RS16165 PF12320 Type 5 capsule protein repressor C-terminal domain AM393_RS16170 PF00072 Response regulator receiver domain AM393_RS16170 PF00486 Transcriptional regulatory protein, C terminal AM393_RS16175 PF00989 PAS fold AM393_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS16175 PF11808 Phosphate regulon sensor protein PhoR AM393_RS16175 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS16180 PF05525 Branched-chain amino acid transport protein AM393_RS16185 PF00324 Amino acid permease AM393_RS16190 PF00128 Alpha amylase, catalytic domain AM393_RS16190 PF02903 Alpha amylase, N-terminal ig-like domain AM393_RS16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS16195 PF03466 LysR substrate binding domain AM393_RS16200 PF00857 Isochorismatase family AM393_RS16210 PF01979 Amidohydrolase family AM393_RS16215 PF01116 Fructose-bisphosphate aldolase class-II AM393_RS16220 PF00294 pfkB family carbohydrate kinase AM393_RS16225 PF03611 PTS system sugar-specific permease component AM393_RS16235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS16240 PF00578 AhpC/TSA family AM393_RS16240 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM393_RS16245 PF04336 Acyl carrier protein phosphodiesterase AM393_RS16250 PF02547 Queuosine biosynthesis protein AM393_RS16255 PF01702 Queuine tRNA-ribosyltransferase AM393_RS16260 PF02699 Preprotein translocase subunit AM393_RS16265 PF13721 SecD export protein N-terminal TM region AM393_RS16265 PF07549 SecD/SecF GG Motif AM393_RS16265 PF02355 Protein export membrane protein AM393_RS16270 PF07549 SecD/SecF GG Motif AM393_RS16270 PF02355 Protein export membrane protein AM393_RS16285 PF03502 Nucleoside-specific channel-forming protein, Tsx AM393_RS16290 PF11622 Protein of unknown function (DUF3251) AM393_RS16295 PF03477 ATP cone domain AM393_RS16300 PF01872 RibD C-terminal domain AM393_RS16300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM393_RS16305 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM393_RS16310 PF01029 NusB family AM393_RS16315 PF00586 AIR synthase related protein, N-terminal domain AM393_RS16315 PF02769 AIR synthase related protein, C-terminal domain AM393_RS16320 PF04608 Phosphatidylglycerophosphatase A AM393_RS16325 PF00248 Aldo/keto reductase family AM393_RS16330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM393_RS16330 PF02779 Transketolase, pyrimidine binding domain AM393_RS16330 PF02780 Transketolase, C-terminal domain AM393_RS16335 PF00348 Polyprenyl synthetase AM393_RS16340 PF02609 Exonuclease VII small subunit AM393_RS16345 PF02568 Thiamine biosynthesis protein (ThiI) AM393_RS16345 PF02926 THUMP domain AM393_RS16355 PF01965 DJ-1/PfpI family AM393_RS16360 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM393_RS16360 PF02558 Ketopantoate reductase PanE/ApbA AM393_RS16365 PF04461 Protein of unknown function (DUF520) AM393_RS16370 PF07690 Major Facilitator Superfamily AM393_RS16375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS16375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS16380 PF07690 Major Facilitator Superfamily AM393_RS16390 PF00890 FAD binding domain AM393_RS16400 PF00890 FAD binding domain AM393_RS16405 PF08501 Shikimate dehydrogenase substrate binding domain AM393_RS16405 PF01488 Shikimate / quinate 5-dehydrogenase AM393_RS16405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM393_RS16410 PF01614 Bacterial transcriptional regulator AM393_RS16410 PF09339 IclR helix-turn-helix domain AM393_RS16420 PF01040 UbiA prenyltransferase family AM393_RS16425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM393_RS16430 PF00510 Cytochrome c oxidase subunit III AM393_RS16435 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM393_RS16440 PF06481 COX Aromatic Rich Motif AM393_RS16440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM393_RS16445 PF07690 Major Facilitator Superfamily AM393_RS16450 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM393_RS16450 PF03923 Uncharacterized lipoprotein AM393_RS16455 PF01722 BolA-like protein AM393_RS16470 PF05697 Bacterial trigger factor protein (TF) AM393_RS16470 PF05698 Bacterial trigger factor protein (TF) C-terminus AM393_RS16470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM393_RS16475 PF00574 Clp protease AM393_RS16480 PF10431 C-terminal, D2-small domain, of ClpB protein AM393_RS16480 PF06689 ClpX C4-type zinc finger AM393_RS16480 PF07724 AAA domain (Cdc48 subfamily) AM393_RS16485 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS16485 PF05362 Lon protease (S16) C-terminal proteolytic domain AM393_RS16485 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM393_RS16490 PF00216 Bacterial DNA-binding protein AM393_RS16495 PF13145 PPIC-type PPIASE domain AM393_RS16510 PF06508 Queuosine biosynthesis protein QueC AM393_RS16515 PF12793 Sugar transport-related sRNA regulator N-term AM393_RS16515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS16525 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS16530 PF01037 Lrp/AsnC ligand binding domain AM393_RS16530 PF13404 AsnC-type helix-turn-helix domain AM393_RS16535 PF00664 ABC transporter transmembrane region AM393_RS16535 PF00005 ABC transporter AM393_RS16540 PF00005 ABC transporter AM393_RS16540 PF00664 ABC transporter transmembrane region AM393_RS16545 PF00543 Nitrogen regulatory protein P-II AM393_RS16550 PF00909 Ammonium Transporter Family AM393_RS16560 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM393_RS16565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM393_RS16600 PF03824 High-affinity nickel-transport protein AM393_RS16605 PF02583 Metal-sensitive transcriptional repressor AM393_RS16610 PF12792 CSS motif domain associated with EAL AM393_RS16610 PF00563 EAL domain AM393_RS16615 PF17912 MalK OB fold domain AM393_RS16615 PF00005 ABC transporter AM393_RS16620 PF13416 Bacterial extracellular solute-binding protein AM393_RS16625 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS16630 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS16635 PF07745 Glycosyl hydrolase family 53 AM393_RS16640 PF02449 Beta-galactosidase AM393_RS16640 PF08532 Beta-galactosidase trimerisation domain AM393_RS16640 PF08533 Beta-galactosidase C-terminal domain AM393_RS16645 PF00367 phosphotransferase system, EIIB AM393_RS16645 PF02378 Phosphotransferase system, EIIC AM393_RS16650 PF02264 LamB porin AM393_RS16655 PF00356 Bacterial regulatory proteins, lacI family AM393_RS16660 PF01197 Ribosomal protein L31 AM393_RS16665 PF00444 Ribosomal protein L36 AM393_RS16675 PF00392 Bacterial regulatory proteins, gntR family AM393_RS16675 PF00155 Aminotransferase class I and II AM393_RS16680 PF10777 Inner membrane protein YlaC AM393_RS16685 PF14602 Hexapeptide repeat of succinyl-transferase AM393_RS16685 PF12464 Maltose acetyltransferase AM393_RS16690 PF05321 Haemolysin expression modulating protein AM393_RS16695 PF10757 Biofilm formation regulator YbaJ AM393_RS16700 PF00873 AcrB/AcrD/AcrF family AM393_RS16705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS16705 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS16710 PF00440 Bacterial regulatory proteins, tetR family AM393_RS16710 PF08361 MAATS-type transcriptional repressor, C-terminal region AM393_RS16715 PF12795 Mechanosensitive ion channel porin domain AM393_RS16715 PF00924 Mechanosensitive ion channel AM393_RS16715 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM393_RS16720 PF04754 Putative transposase, YhgA-like AM393_RS16725 PF10689 Protein of unknown function (DUF2496) AM393_RS16730 PF07445 Primosomal replication protein priC AM393_RS16735 PF04304 Protein of unknown function (DUF454) AM393_RS16740 PF00156 Phosphoribosyl transferase domain AM393_RS16745 PF12170 DNA polymerase III tau subunit V interacting with alpha AM393_RS16745 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM393_RS16745 PF12169 DNA polymerase III subunits gamma and tau domain III AM393_RS16750 PF02575 YbaB/EbfC DNA-binding family AM393_RS16755 PF13662 Toprim domain AM393_RS16755 PF02132 RecR protein AM393_RS16760 PF00183 Hsp90 protein AM393_RS16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS16765 PF05191 Adenylate kinase, active site lid AM393_RS16770 PF00762 Ferrochelatase AM393_RS16775 PF00294 pfkB family carbohydrate kinase AM393_RS16780 PF02254 TrkA-N domain AM393_RS16780 PF00999 Sodium/hydrogen exchanger family AM393_RS16785 PF07690 Major Facilitator Superfamily AM393_RS16790 PF02872 5'-nucleotidase, C-terminal domain AM393_RS16790 PF00149 Calcineurin-like phosphoesterase AM393_RS16795 PF04073 Aminoacyl-tRNA editing domain AM393_RS16800 PF01963 TraB family AM393_RS16805 PF00403 Heavy-metal-associated domain AM393_RS16810 PF13411 MerR HTH family regulatory protein AM393_RS16815 PF01957 NfeD-like C-terminal, partner-binding AM393_RS16820 PF01145 SPFH domain / Band 7 family AM393_RS16820 PF16200 C-terminal region of band_7 AM393_RS16825 PF00005 ABC transporter AM393_RS16830 PF03649 Uncharacterised protein family (UPF0014) AM393_RS16840 PF00085 Thioredoxin AM393_RS16845 PF00106 short chain dehydrogenase AM393_RS16850 PF13472 GDSL-like Lipase/Acylhydrolase family AM393_RS16855 PF00005 ABC transporter AM393_RS16865 PF00267 Gram-negative porin AM393_RS16875 PF02222 ATP-grasp domain AM393_RS16875 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM393_RS16880 PF00731 AIR carboxylase AM393_RS16895 PF00149 Calcineurin-like phosphoesterase AM393_RS16900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM393_RS16905 PF01406 tRNA synthetases class I (C) catalytic domain AM393_RS16905 PF09190 DALR domain AM393_RS16915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM393_RS16915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM393_RS16930 PF00589 Phage integrase family AM393_RS17010 PF00772 DnaB-like helicase N terminal domain AM393_RS17010 PF03796 DnaB-like helicase C terminal domain AM393_RS17080 PF00959 Phage lysozyme AM393_RS17085 PF03245 Bacteriophage Rz lysis protein AM393_RS17190 PF03869 Arc-like DNA binding domain AM393_RS17265 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS17275 PF00717 Peptidase S24-like AM393_RS17280 PF00589 Phage integrase family AM393_RS17290 PF00576 HIUase/Transthyretin family AM393_RS17305 PF00285 Citrate synthase, C-terminal domain AM393_RS17320 PF16970 Type-1 fimbrial protein, A AM393_RS17325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS17325 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS17330 PF00577 Outer membrane usher protein AM393_RS17330 PF13954 PapC N-terminal domain AM393_RS17330 PF13953 PapC C-terminal domain AM393_RS17345 PF03279 Bacterial lipid A biosynthesis acyltransferase AM393_RS17355 PF18500 CadC C-terminal domain 1 AM393_RS17355 PF00486 Transcriptional regulatory protein, C terminal AM393_RS17360 PF13520 Amino acid permease AM393_RS17365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM393_RS17365 PF01276 Orn/Lys/Arg decarboxylase, major domain AM393_RS17365 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM393_RS17370 PF00854 POT family AM393_RS17375 PF00152 tRNA synthetases class II (D, K and N) AM393_RS17375 PF01336 OB-fold nucleic acid binding domain AM393_RS17385 PF01261 Xylose isomerase-like TIM barrel AM393_RS17390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS17390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS17395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS17395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS17405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS17405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS17410 PF00356 Bacterial regulatory proteins, lacI family AM393_RS17415 PF13407 Periplasmic binding protein domain AM393_RS17420 PF00005 ABC transporter AM393_RS17425 PF02653 Branched-chain amino acid transport system / permease component AM393_RS17435 PF00356 Bacterial regulatory proteins, lacI family AM393_RS17435 PF13407 Periplasmic binding protein domain AM393_RS17440 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM393_RS17440 PF08244 Glycosyl hydrolases family 32 C terminal AM393_RS17445 PF02378 Phosphotransferase system, EIIC AM393_RS17445 PF00367 phosphotransferase system, EIIB AM393_RS17450 PF11471 Maltoporin periplasmic N-terminal extension AM393_RS17450 PF02264 LamB porin AM393_RS17455 PF00294 pfkB family carbohydrate kinase AM393_RS17465 PF11742 Protein of unknown function (DUF3302) AM393_RS17470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS17470 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS17475 PF00005 ABC transporter AM393_RS17480 PF01032 FecCD transport family AM393_RS17505 PF01546 Peptidase family M20/M25/M40 AM393_RS17505 PF07687 Peptidase dimerisation domain AM393_RS17510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS17515 PF00248 Aldo/keto reductase family AM393_RS17525 PF17409 MoaF C-terminal domain AM393_RS17525 PF10703 MoaF N-terminal domain AM393_RS17535 PF00884 Sulfatase AM393_RS17540 PF04055 Radical SAM superfamily AM393_RS17545 PF00196 Bacterial regulatory proteins, luxR family AM393_RS17555 PF00850 Histone deacetylase domain AM393_RS17565 PF13520 Amino acid permease AM393_RS17575 PF01266 FAD dependent oxidoreductase AM393_RS17580 PF00171 Aldehyde dehydrogenase family AM393_RS17590 PF00593 TonB dependent receptor AM393_RS17590 PF07715 TonB-dependent Receptor Plug Domain AM393_RS17595 PF00324 Amino acid permease AM393_RS17600 PF03825 Nucleoside H+ symporter AM393_RS17610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS17610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS17620 PF00196 Bacterial regulatory proteins, luxR family AM393_RS17635 PF15976 CS1-pili formation C-terminal AM393_RS17635 PF16967 E-set like domain AM393_RS17640 PF18649 EcpB C-terminal domain AM393_RS17645 PF16449 Fimbrillin MatB AM393_RS17660 PF00356 Bacterial regulatory proteins, lacI family AM393_RS17665 PF00924 Mechanosensitive ion channel AM393_RS17670 PF07690 Major Facilitator Superfamily AM393_RS17690 PF03610 PTS system fructose IIA component AM393_RS17690 PF00874 PRD domain AM393_RS17690 PF00158 Sigma-54 interaction domain AM393_RS17695 PF01380 SIS domain AM393_RS17700 PF01380 SIS domain AM393_RS17705 PF03613 PTS system mannose/fructose/sorbose family IID component AM393_RS17715 PF03830 PTS system sorbose subfamily IIB component AM393_RS17725 PF00881 Nitroreductase family AM393_RS17730 PF04237 YjbR AM393_RS17735 PF00440 Bacterial regulatory proteins, tetR family AM393_RS17740 PF12706 Beta-lactamase superfamily domain AM393_RS17745 PF12833 Helix-turn-helix domain AM393_RS17750 PF06643 Protein of unknown function (DUF1158) AM393_RS17760 PF00689 Cation transporting ATPase, C-terminus AM393_RS17760 PF00690 Cation transporter/ATPase, N-terminus AM393_RS17765 PF13533 Biotin-lipoyl like AM393_RS17770 PF00873 AcrB/AcrD/AcrF family AM393_RS17780 PF09992 Phosphodiester glycosidase AM393_RS17785 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM393_RS17790 PF00892 EamA-like transporter family AM393_RS17795 PF00155 Aminotransferase class I and II AM393_RS17800 PF00392 Bacterial regulatory proteins, gntR family AM393_RS17800 PF00155 Aminotransferase class I and II AM393_RS17805 PF01464 Transglycosylase SLT domain AM393_RS17805 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS17810 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS17815 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS17820 PF00005 ABC transporter AM393_RS17825 PF00106 short chain dehydrogenase AM393_RS17830 PF00202 Aminotransferase class-III AM393_RS17840 PF00005 ABC transporter AM393_RS17840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS17845 PF00005 ABC transporter AM393_RS17845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS17850 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS17850 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS17855 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS17860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS17870 PF05199 GMC oxidoreductase AM393_RS17870 PF00732 GMC oxidoreductase AM393_RS17875 PF00171 Aldehyde dehydrogenase family AM393_RS17880 PF00440 Bacterial regulatory proteins, tetR family AM393_RS17880 PF13977 BetI-type transcriptional repressor, C-terminal AM393_RS17890 PF02028 BCCT, betaine/carnitine/choline family transporter AM393_RS17900 PF00924 Mechanosensitive ion channel AM393_RS17905 PF03466 LysR substrate binding domain AM393_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS17925 PF02653 Branched-chain amino acid transport system / permease component AM393_RS17930 PF00005 ABC transporter AM393_RS17940 PF13407 Periplasmic binding protein domain AM393_RS17945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS17945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS17950 PF04198 Putative sugar-binding domain AM393_RS17950 PF00325 Bacterial regulatory proteins, crp family AM393_RS17960 PF00456 Transketolase, thiamine diphosphate binding domain AM393_RS17965 PF02779 Transketolase, pyrimidine binding domain AM393_RS17965 PF02780 Transketolase, C-terminal domain AM393_RS17970 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM393_RS17970 PF01648 4'-phosphopantetheinyl transferase superfamily AM393_RS17975 PF07715 TonB-dependent Receptor Plug Domain AM393_RS17975 PF00593 TonB dependent receptor AM393_RS17985 PF11806 Domain of unknown function (DUF3327) AM393_RS17985 PF00756 Putative esterase AM393_RS17990 PF03621 MbtH-like protein AM393_RS17995 PF13193 AMP-binding enzyme C-terminal domain AM393_RS17995 PF00501 AMP-binding enzyme AM393_RS17995 PF00550 Phosphopantetheine attachment site AM393_RS17995 PF00975 Thioesterase domain AM393_RS17995 PF00668 Condensation domain AM393_RS18000 PF00005 ABC transporter AM393_RS18005 PF01032 FecCD transport family AM393_RS18010 PF01032 FecCD transport family AM393_RS18015 PF05977 Transmembrane secretion effector AM393_RS18020 PF01497 Periplasmic binding protein AM393_RS18025 PF00425 chorismate binding enzyme AM393_RS18030 PF00501 AMP-binding enzyme AM393_RS18030 PF13193 AMP-binding enzyme C-terminal domain AM393_RS18035 PF00550 Phosphopantetheine attachment site AM393_RS18035 PF00857 Isochorismatase family AM393_RS18045 PF03061 Thioesterase superfamily AM393_RS18050 PF13722 5TM C-terminal transporter carbon starvation CstA AM393_RS18050 PF02554 Carbon starvation protein CstA AM393_RS18055 PF04328 Selenoprotein, putative AM393_RS18075 PF00465 Iron-containing alcohol dehydrogenase AM393_RS18080 PF00005 ABC transporter AM393_RS18085 PF02653 Branched-chain amino acid transport system / permease component AM393_RS18100 PF01636 Phosphotransferase enzyme family AM393_RS18105 PF01008 Initiation factor 2 subunit family AM393_RS18110 PF00328 Histidine phosphatase superfamily (branch 2) AM393_RS18115 PF07690 Major Facilitator Superfamily AM393_RS18120 PF00459 Inositol monophosphatase family AM393_RS18125 PF00356 Bacterial regulatory proteins, lacI family AM393_RS18130 PF07969 Amidohydrolase family AM393_RS18140 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM393_RS18145 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS18150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS18150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS18155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM393_RS18155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS18165 PF02653 Branched-chain amino acid transport system / permease component AM393_RS18170 PF02653 Branched-chain amino acid transport system / permease component AM393_RS18175 PF00005 ABC transporter AM393_RS18185 PF01568 Molydopterin dinucleotide binding domain AM393_RS18185 PF00384 Molybdopterin oxidoreductase AM393_RS18190 PF03079 ARD/ARD' family AM393_RS18200 PF00155 Aminotransferase class I and II AM393_RS18205 PF02195 ParB-like nuclease domain AM393_RS18210 PF11922 Domain of unknown function (DUF3440) AM393_RS18210 PF01507 Phosphoadenosine phosphosulfate reductase family AM393_RS18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS18215 PF03466 LysR substrate binding domain AM393_RS18220 PF13098 Thioredoxin-like domain AM393_RS18225 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM393_RS18225 PF00578 AhpC/TSA family AM393_RS18230 PF13192 Thioredoxin domain AM393_RS18230 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS18235 PF00582 Universal stress protein family AM393_RS18240 PF01272 Transcription elongation factor, GreA/GreB, C-term AM393_RS18240 PF14760 Rnk N-terminus AM393_RS18245 PF00445 Ribonuclease T2 family AM393_RS18250 PF03606 C4-dicarboxylate anaerobic carrier AM393_RS18255 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM393_RS18260 PF00313 'Cold-shock' DNA-binding domain AM393_RS18265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM393_RS18270 PF00795 Carbon-nitrogen hydrolase AM393_RS18275 PF02416 mttA/Hcf106 family AM393_RS18280 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM393_RS18280 PF04055 Radical SAM superfamily AM393_RS18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS18285 PF03466 LysR substrate binding domain AM393_RS18290 PF03099 Biotin/lipoate A/B protein ligase family AM393_RS18295 PF04359 Protein of unknown function (DUF493) AM393_RS18300 PF07943 Penicillin-binding protein 5, C-terminal domain AM393_RS18300 PF00768 D-alanyl-D-alanine carboxypeptidase AM393_RS18305 PF05036 Sporulation related domain AM393_RS18305 PF03330 Lytic transglycolase AM393_RS18310 PF01098 Cell cycle protein AM393_RS18315 PF03717 Penicillin-binding Protein dimerisation domain AM393_RS18315 PF00905 Penicillin binding protein transpeptidase domain AM393_RS18320 PF02590 Predicted SPOUT methyltransferase AM393_RS18335 PF00300 Histidine phosphatase superfamily (branch 1) AM393_RS18340 PF01467 Cytidylyltransferase-like AM393_RS18345 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM393_RS18345 PF06144 DNA polymerase III, delta subunit AM393_RS18350 PF04390 Lipopolysaccharide-assembly AM393_RS18355 PF13603 Leucyl-tRNA synthetase, Domain 2 AM393_RS18355 PF08264 Anticodon-binding domain of tRNA AM393_RS18355 PF00133 tRNA synthetases class I (I, L, M and V) AM393_RS18360 PF07295 Zinc-ribbon containing domain AM393_RS18365 PF05860 haemagglutination activity domain AM393_RS18365 PF04829 Pre-toxin domain with VENN motif AM393_RS18365 PF13332 Hemagglutinin repeat AM393_RS18365 PF14436 Bacterial EndoU nuclease AM393_RS18365 PF05594 Haemagluttinin repeat AM393_RS18370 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM393_RS18370 PF17287 POTRA domain AM393_RS18370 PF08479 POTRA domain, ShlB-type AM393_RS18375 PF00005 ABC transporter AM393_RS18380 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS18385 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS18390 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS18395 PF00795 Carbon-nitrogen hydrolase AM393_RS18400 PF00571 CBS domain AM393_RS18400 PF03471 Transporter associated domain AM393_RS18405 PF02130 Uncharacterized protein family UPF0054 AM393_RS18410 PF02562 PhoH-like protein AM393_RS18415 PF00919 Uncharacterized protein family UPF0004 AM393_RS18415 PF04055 Radical SAM superfamily AM393_RS18415 PF01938 TRAM domain AM393_RS18420 PF01494 FAD binding domain AM393_RS18465 PF13537 Glutamine amidotransferase domain AM393_RS18465 PF00733 Asparagine synthase AM393_RS18470 PF13344 Haloacid dehalogenase-like hydrolase AM393_RS18475 PF00480 ROK family AM393_RS18475 PF01047 MarR family AM393_RS18480 PF01979 Amidohydrolase family AM393_RS18485 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM393_RS18495 PF02378 Phosphotransferase system, EIIC AM393_RS18495 PF00367 phosphotransferase system, EIIB AM393_RS18495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM393_RS18500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM393_RS18500 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM393_RS18510 PF03573 outer membrane porin, OprD family AM393_RS18515 PF13982 YbfN-like lipoprotein AM393_RS18520 PF07690 Major Facilitator Superfamily AM393_RS18525 PF01475 Ferric uptake regulator family AM393_RS18530 PF00258 Flavodoxin AM393_RS18535 PF01402 Ribbon-helix-helix protein, copG family AM393_RS18540 PF12697 Alpha/beta hydrolase family AM393_RS18545 PF17206 SeqA protein N-terminal domain AM393_RS18545 PF03925 SeqA protein C-terminal domain AM393_RS18550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM393_RS18550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM393_RS18550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM393_RS18550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM393_RS18560 PF00486 Transcriptional regulatory protein, C terminal AM393_RS18560 PF00072 Response regulator receiver domain AM393_RS18565 PF13492 GAF domain AM393_RS18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS18565 PF02702 Osmosensitive K+ channel His kinase sensor domain AM393_RS18565 PF13493 Domain of unknown function (DUF4118) AM393_RS18565 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS18570 PF02669 K+-transporting ATPase, c chain AM393_RS18580 PF03814 Potassium-transporting ATPase A subunit AM393_RS18585 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM393_RS18590 PF10725 Protein of unknown function (DUF2517) AM393_RS18595 PF00875 DNA photolyase AM393_RS18595 PF03441 FAD binding domain of DNA photolyase AM393_RS18600 PF00854 POT family AM393_RS18605 PF01784 NIF3 (NGG1p interacting factor 3) AM393_RS18610 PF02682 Carboxyltransferase domain, subdomain C and D AM393_RS18615 PF02626 Carboxyltransferase domain, subdomain A and B AM393_RS18620 PF03746 LamB/YcsF family AM393_RS18635 PF01470 Pyroglutamyl peptidase AM393_RS18640 PF06827 Zinc finger found in FPG and IleRS AM393_RS18640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM393_RS18640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM393_RS18645 PF00285 Citrate synthase, C-terminal domain AM393_RS18655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM393_RS18660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM393_RS18665 PF00890 FAD binding domain AM393_RS18665 PF02910 Fumarate reductase flavoprotein C-term AM393_RS18670 PF13085 2Fe-2S iron-sulfur cluster binding domain AM393_RS18675 PF00676 Dehydrogenase E1 component AM393_RS18675 PF16078 2-oxoglutarate dehydrogenase N-terminus AM393_RS18675 PF02779 Transketolase, pyrimidine binding domain AM393_RS18675 PF16870 2-oxoglutarate dehydrogenase C-terminal AM393_RS18680 PF00364 Biotin-requiring enzyme AM393_RS18680 PF02817 e3 binding domain AM393_RS18680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM393_RS18685 PF08442 ATP-grasp domain AM393_RS18685 PF00549 CoA-ligase AM393_RS18690 PF00549 CoA-ligase AM393_RS18690 PF02629 CoA binding domain AM393_RS18700 PF01654 Cytochrome bd terminal oxidase subunit I AM393_RS18705 PF02322 Cytochrome bd terminal oxidase subunit II AM393_RS18710 PF08173 Membrane bound YbgT-like protein AM393_RS18715 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM393_RS18720 PF03061 Thioesterase superfamily AM393_RS18725 PF01618 MotA/TolQ/ExbB proton channel family AM393_RS18730 PF02472 Biopolymer transport protein ExbD/TolR AM393_RS18735 PF06519 TolA C-terminal AM393_RS18740 PF04052 TolB amino-terminal domain AM393_RS18740 PF07676 WD40-like Beta Propeller Repeat AM393_RS18745 PF00691 OmpA family AM393_RS18750 PF13174 Tetratricopeptide repeat AM393_RS18750 PF16331 TolA binding protein trimerisation AM393_RS18795 PF02445 Quinolinate synthetase A protein AM393_RS18800 PF04973 Nicotinamide mononucleotide transporter AM393_RS18805 PF01545 Cation efflux family AM393_RS18810 PF13985 YbgS-like protein AM393_RS18815 PF00793 DAHP synthetase I family AM393_RS18820 PF00300 Histidine phosphatase superfamily (branch 1) AM393_RS18825 PF01263 Aldose 1-epimerase AM393_RS18830 PF10509 Galactokinase galactose-binding signature AM393_RS18830 PF08544 GHMP kinases C terminal AM393_RS18830 PF00288 GHMP kinases N terminal domain AM393_RS18835 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM393_RS18835 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM393_RS18840 PF16363 GDP-mannose 4,6 dehydratase AM393_RS18845 PF00005 ABC transporter AM393_RS18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS18855 PF03459 TOBE domain AM393_RS18860 PF10766 Multidrug efflux pump-associated protein AcrZ AM393_RS18870 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS18875 PF03459 TOBE domain AM393_RS18875 PF00005 ABC transporter AM393_RS18885 PF10282 Lactonase, 7-bladed beta-propeller AM393_RS18890 PF10798 Biofilm development protein YmgB/AriR AM393_RS18900 PF10798 Biofilm development protein YmgB/AriR AM393_RS18905 PF04940 Sensors of blue-light using FAD AM393_RS18905 PF00563 EAL domain AM393_RS18940 PF01095 Pectinesterase AM393_RS18945 PF01979 Amidohydrolase family AM393_RS18950 PF00491 Arginase family AM393_RS18955 PF00392 Bacterial regulatory proteins, gntR family AM393_RS18955 PF07702 UTRA domain AM393_RS18960 PF17391 Urocanase N-terminal domain AM393_RS18960 PF17392 Urocanase C-terminal domain AM393_RS18960 PF01175 Urocanase Rossmann-like domain AM393_RS18965 PF00221 Aromatic amino acid lyase AM393_RS18970 PF00324 Amino acid permease AM393_RS18980 PF01161 Phosphatidylethanolamine-binding protein AM393_RS18985 PF00202 Aminotransferase class-III AM393_RS18990 PF04055 Radical SAM superfamily AM393_RS18990 PF06968 Biotin and Thiamin Synthesis associated domain AM393_RS18995 PF00155 Aminotransferase class I and II AM393_RS19000 PF08241 Methyltransferase domain AM393_RS19010 PF00005 ABC transporter AM393_RS19025 PF00271 Helicase conserved C-terminal domain AM393_RS19025 PF04851 Type III restriction enzyme, res subunit AM393_RS19025 PF12344 Ultra-violet resistance protein B AM393_RS19025 PF02151 UvrB/uvrC motif AM393_RS19025 PF17757 UvrB interaction domain AM393_RS19035 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS19040 PF00072 Response regulator receiver domain AM393_RS19040 PF00486 Transcriptional regulatory protein, C terminal AM393_RS19045 PF00884 Sulfatase AM393_RS19045 PF08019 Phosphoethanolamine transferase EptA/EptB AM393_RS19050 PF01933 Uncharacterised protein family UPF0052 AM393_RS19060 PF06463 Molybdenum Cofactor Synthesis C AM393_RS19060 PF04055 Radical SAM superfamily AM393_RS19065 PF00994 Probable molybdopterin binding domain AM393_RS19070 PF01967 MoaC family AM393_RS19075 PF02597 ThiS family AM393_RS19080 PF02391 MoaE protein AM393_RS19085 PF01027 Inhibitor of apoptosis-promoting Bax1 AM393_RS19090 PF03706 Lysylphosphatidylglycerol synthase TM region AM393_RS19095 PF13091 PLD-like domain AM393_RS19100 PF03372 Endonuclease/Exonuclease/phosphatase family AM393_RS19105 PF11076 Putative inner membrane protein YbhQ AM393_RS19120 PF00005 ABC transporter AM393_RS19125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS19130 PF09209 Tetracyclin repressor-like, C-terminal domain AM393_RS19130 PF00440 Bacterial regulatory proteins, tetR family AM393_RS19135 PF03466 LysR substrate binding domain AM393_RS19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS19140 PF07690 Major Facilitator Superfamily AM393_RS19150 PF00456 Transketolase, thiamine diphosphate binding domain AM393_RS19155 PF02779 Transketolase, pyrimidine binding domain AM393_RS19155 PF02780 Transketolase, C-terminal domain AM393_RS19160 PF00271 Helicase conserved C-terminal domain AM393_RS19160 PF00270 DEAD/DEAH box helicase AM393_RS19165 PF13307 Helicase C-terminal domain AM393_RS19165 PF00270 DEAD/DEAH box helicase AM393_RS19165 PF06733 DEAD_2 AM393_RS19170 PF02885 Glycosyl transferase family, helical bundle domain AM393_RS19175 PF07338 Protein of unknown function (DUF1471) AM393_RS19180 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM393_RS19190 PF01613 Flavin reductase like domain AM393_RS19195 PF05971 RNA methyltransferase AM393_RS19200 PF00924 Mechanosensitive ion channel AM393_RS19205 PF00005 ABC transporter AM393_RS19210 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS19220 PF00210 Ferritin-like domain AM393_RS19225 PF00892 EamA-like transporter family AM393_RS19230 PF13505 Outer membrane protein beta-barrel domain AM393_RS19235 PF00884 Sulfatase AM393_RS19245 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM393_RS19245 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM393_RS19250 PF03600 Citrate transporter AM393_RS19255 PF00232 Glycosyl hydrolase family 1 AM393_RS19260 PF00392 Bacterial regulatory proteins, gntR family AM393_RS19260 PF07702 UTRA domain AM393_RS19265 PF03734 L,D-transpeptidase catalytic domain AM393_RS19265 PF17969 L,D-transpeptidase C-terminal domain AM393_RS19270 PF13350 Tyrosine phosphatase family AM393_RS19275 PF12848 ABC transporter AM393_RS19275 PF00005 ABC transporter AM393_RS19285 PF17137 Domain of unknown function (DUF5110) AM393_RS19285 PF13802 Galactose mutarotase-like AM393_RS19285 PF01055 Glycosyl hydrolases family 31 AM393_RS19285 PF16338 Domain of unknown function (DUF4968) AM393_RS19290 PF07690 Major Facilitator Superfamily AM393_RS19295 PF00356 Bacterial regulatory proteins, lacI family AM393_RS19300 PF07350 Protein of unknown function (DUF1479) AM393_RS19310 PF02901 Pyruvate formate lyase-like AM393_RS19310 PF01228 Glycine radical AM393_RS19315 PF04055 Radical SAM superfamily AM393_RS19320 PF00899 ThiF family AM393_RS19325 PF00994 Probable molybdopterin binding domain AM393_RS19325 PF03453 MoeA N-terminal region (domain I and II) AM393_RS19325 PF03454 MoeA C-terminal region (domain IV) AM393_RS19330 PF01112 Asparaginase AM393_RS19335 PF00005 ABC transporter AM393_RS19335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS19340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS19345 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19350 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19350 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS19360 PF00919 Uncharacterized protein family UPF0004 AM393_RS19360 PF18693 TRAM domain AM393_RS19360 PF04055 Radical SAM superfamily AM393_RS19365 PF01306 LacY proton/sugar symporter AM393_RS19370 PF10799 Biofilm formation protein (YliH/bssR) AM393_RS19375 PF07995 Glucose / Sorbosone dehydrogenase AM393_RS19380 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS19380 PF13417 Glutathione S-transferase, N-terminal domain AM393_RS19385 PF07943 Penicillin-binding protein 5, C-terminal domain AM393_RS19385 PF00768 D-alanyl-D-alanine carboxypeptidase AM393_RS19390 PF08220 DeoR-like helix-turn-helix domain AM393_RS19390 PF00455 DeoR C terminal sensor domain AM393_RS19395 PF01569 PAP2 superfamily AM393_RS19405 PF07690 Major Facilitator Superfamily AM393_RS19415 PF07690 Major Facilitator Superfamily AM393_RS19420 PF00440 Bacterial regulatory proteins, tetR family AM393_RS19425 PF00589 Phage integrase family AM393_RS19425 PF02899 Phage integrase, N-terminal SAM-like domain AM393_RS19435 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS19445 PF07022 Bacteriophage CI repressor helix-turn-helix domain AM393_RS19445 PF16452 Bacteriophage CI repressor C-terminal domain AM393_RS19455 PF06892 Phage regulatory protein CII (CP76) AM393_RS19465 PF17282 Family of unknown function (DUF5347) AM393_RS19475 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM393_RS19480 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM393_RS19485 PF05840 Bacteriophage replication gene A protein (GPA) AM393_RS19495 PF06183 DinI-like family AM393_RS19620 PF04984 Phage tail sheath protein subtilisin-like domain AM393_RS19620 PF17482 Phage tail sheath C-terminal domain AM393_RS19655 PF04606 Ogr/Delta-like zinc finger AM393_RS19660 PF02080 TrkA-C domain AM393_RS19660 PF06826 Predicted Permease Membrane Region AM393_RS19665 PF11045 Putative inner membrane protein of Enterobacteriaceae AM393_RS19670 PF00462 Glutaredoxin AM393_RS19675 PF07214 Protein of unknown function (DUF1418) AM393_RS19685 PF08443 RimK-like ATP-grasp domain AM393_RS19685 PF18030 RimK PreATP-grasp domain AM393_RS19690 PF10722 Putative bacterial sensory transduction regulator AM393_RS19695 PF13416 Bacterial extracellular solute-binding protein AM393_RS19700 PF00005 ABC transporter AM393_RS19700 PF08402 TOBE domain AM393_RS19705 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19710 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19715 PF10767 Protein of unknown function (DUF2593) AM393_RS19720 PF05958 tRNA (Uracil-5-)-methyltransferase AM393_RS19725 PF00072 Response regulator receiver domain AM393_RS19725 PF00486 Transcriptional regulatory protein, C terminal AM393_RS19730 PF16736 Single Cache-like AM393_RS19730 PF00989 PAS fold AM393_RS19730 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS19730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS19735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS19740 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19745 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS19750 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS19755 PF00005 ABC transporter AM393_RS19760 PF12883 Protein of unknown function (DUF3828) AM393_RS19770 PF00360 Phytochrome region AM393_RS19770 PF00563 EAL domain AM393_RS19770 PF01590 GAF domain AM393_RS19770 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS19775 PF01510 N-acetylmuramoyl-L-alanine amidase AM393_RS19780 PF01370 NAD dependent epimerase/dehydratase family AM393_RS19785 PF11066 Protein of unknown function (DUF2867) AM393_RS19785 PF13460 NAD(P)H-binding AM393_RS19790 PF01212 Beta-eliminating lyase AM393_RS19795 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS19795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS19795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS19810 PF00970 Oxidoreductase FAD-binding domain AM393_RS19810 PF00175 Oxidoreductase NAD-binding domain AM393_RS19810 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS19815 PF03063 Prismane/CO dehydrogenase family AM393_RS19820 PF03956 Lysine exporter LysO AM393_RS19825 PF00230 Major intrinsic protein AM393_RS19830 PF11398 Protein of unknown function (DUF2813) AM393_RS19835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS19840 PF12704 MacB-like periplasmic core domain AM393_RS19840 PF02687 FtsX-like permease family AM393_RS19840 PF00005 ABC transporter AM393_RS19850 PF00313 'Cold-shock' DNA-binding domain AM393_RS19855 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM393_RS19860 PF07724 AAA domain (Cdc48 subfamily) AM393_RS19860 PF17871 AAA lid domain AM393_RS19860 PF02861 Clp amino terminal domain, pathogenicity island component AM393_RS19860 PF10431 C-terminal, D2-small domain, of ClpB protein AM393_RS19860 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS19865 PF01176 Translation initiation factor 1A / IF-1 AM393_RS19870 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM393_RS19875 PF00664 ABC transporter transmembrane region AM393_RS19875 PF00005 ABC transporter AM393_RS19880 PF00005 ABC transporter AM393_RS19880 PF00664 ABC transporter transmembrane region AM393_RS19885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS19895 PF01037 Lrp/AsnC ligand binding domain AM393_RS19900 PF17854 FtsK alpha domain AM393_RS19900 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM393_RS19900 PF01580 FtsK/SpoIIIE family AM393_RS19900 PF09397 Ftsk gamma domain AM393_RS19905 PF03548 Outer membrane lipoprotein carrier protein LolA AM393_RS19910 PF16193 AAA C-terminal domain AM393_RS19910 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS19910 PF12002 MgsA AAA+ ATPase C terminal AM393_RS19915 PF02403 Seryl-tRNA synthetase N-terminal domain AM393_RS19915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM393_RS19920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM393_RS19920 PF01568 Molydopterin dinucleotide binding domain AM393_RS19920 PF00384 Molybdopterin oxidoreductase AM393_RS19925 PF13247 4Fe-4S dicluster domain AM393_RS19925 PF12800 4Fe-4S binding domain AM393_RS19930 PF04976 DMSO reductase anchor subunit (DmsC) AM393_RS19940 PF07690 Major Facilitator Superfamily AM393_RS19945 PF04055 Radical SAM superfamily AM393_RS19950 PF02901 Pyruvate formate lyase-like AM393_RS19950 PF01228 Glycine radical AM393_RS19955 PF01226 Formate/nitrite transporter AM393_RS19960 PF18381 YcaO cyclodehydratase C-terminal domain AM393_RS19960 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM393_RS19965 PF04239 Protein of unknown function (DUF421) AM393_RS19970 PF00266 Aminotransferase class-V AM393_RS19975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM393_RS19980 PF02224 Cytidylate kinase AM393_RS19985 PF00575 S1 RNA binding domain AM393_RS19990 PF00216 Bacterial DNA-binding protein AM393_RS19995 PF00753 Metallo-beta-lactamase superfamily AM393_RS19995 PF03772 Competence protein AM393_RS20000 PF00005 ABC transporter AM393_RS20000 PF00664 ABC transporter transmembrane region AM393_RS20005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM393_RS20010 PF06224 Winged helix DNA-binding domain AM393_RS20015 PF03966 Trm112p-like protein AM393_RS20020 PF02348 Cytidylyltransferase AM393_RS20025 PF01636 Phosphotransferase enzyme family AM393_RS20030 PF02698 DUF218 domain AM393_RS20035 PF13847 Methyltransferase domain AM393_RS20040 PF17192 MukF middle domain AM393_RS20040 PF03882 MukF winged-helix domain AM393_RS20040 PF17193 MukF C-terminal domain AM393_RS20045 PF04288 MukE-like family AM393_RS20050 PF04310 MukB N-terminal AM393_RS20050 PF16330 MukB hinge domain AM393_RS20055 PF03734 L,D-transpeptidase catalytic domain AM393_RS20055 PF01471 Putative peptidoglycan binding domain AM393_RS20065 PF05951 Bacterial protein of unknown function (DUF882) AM393_RS20070 PF00753 Metallo-beta-lactamase superfamily AM393_RS20075 PF00155 Aminotransferase class I and II AM393_RS20085 PF01336 OB-fold nucleic acid binding domain AM393_RS20085 PF00152 tRNA synthetases class II (D, K and N) AM393_RS20090 PF01037 Lrp/AsnC ligand binding domain AM393_RS20095 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS20105 PF07687 Peptidase dimerisation domain AM393_RS20105 PF01546 Peptidase family M20/M25/M40 AM393_RS20110 PF01546 Peptidase family M20/M25/M40 AM393_RS20110 PF07687 Peptidase dimerisation domain AM393_RS20115 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM393_RS20115 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM393_RS20120 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM393_RS20120 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM393_RS20120 PF01433 Peptidase family M1 domain AM393_RS20125 PF00005 ABC transporter AM393_RS20130 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS20135 PF00296 Luciferase-like monooxygenase AM393_RS20140 PF09084 NMT1/THI5 like AM393_RS20145 PF03358 NADPH-dependent FMN reductase AM393_RS20150 PF01180 Dihydroorotate dehydrogenase AM393_RS20155 PF07126 Cell-division protein ZapC AM393_RS20160 PF03476 MOSC N-terminal beta barrel domain AM393_RS20160 PF03473 MOSC domain AM393_RS20160 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS20165 PF02926 THUMP domain AM393_RS20165 PF01170 Putative RNA methylase family UPF0020 AM393_RS20165 PF10672 S-adenosylmethionine-dependent methyltransferase AM393_RS20170 PF16326 ABC transporter C-terminal domain AM393_RS20170 PF12848 ABC transporter AM393_RS20170 PF00005 ABC transporter AM393_RS20175 PF04403 Paraquat-inducible protein A AM393_RS20180 PF02470 MlaD protein AM393_RS20185 PF03886 ABC-type transport auxiliary lipoprotein component AM393_RS20195 PF04957 Ribosome modulation factor AM393_RS20200 PF07977 FabA-like domain AM393_RS20205 PF05362 Lon protease (S16) C-terminal proteolytic domain AM393_RS20205 PF13654 AAA domain AM393_RS20210 PF17414 MatP C-terminal ribbon-helix-helix domain AM393_RS20210 PF06303 MatP N-terminal domain AM393_RS20215 PF00691 OmpA family AM393_RS20215 PF01389 OmpA-like transmembrane domain AM393_RS20220 PF03846 Cell division inhibitor SulA AM393_RS20230 PF04994 TfoX C-terminal domain AM393_RS20230 PF04993 TfoX N-terminal domain AM393_RS20235 PF12805 FUSC-like inner membrane protein yccS AM393_RS20240 PF03733 Inner membrane component domain AM393_RS20245 PF13361 UvrD-like helicase C-terminal domain AM393_RS20245 PF00580 UvrD/REP helicase N-terminal domain AM393_RS20245 PF12462 DNA helicase IV / RNA helicase N terminal AM393_RS20250 PF02142 MGS-like domain AM393_RS20255 PF13380 CoA binding domain AM393_RS20260 PF08755 Hemimethylated DNA-binding protein YccV like AM393_RS20265 PF17785 PUA-like domain AM393_RS20265 PF10672 S-adenosylmethionine-dependent methyltransferase AM393_RS20270 PF01161 Phosphatidylethanolamine-binding protein AM393_RS20275 PF12833 Helix-turn-helix domain AM393_RS20280 PF00708 Acylphosphatase AM393_RS20285 PF04358 DsrC like protein AM393_RS20290 PF01027 Inhibitor of apoptosis-promoting Bax1 AM393_RS20295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS20305 PF12792 CSS motif domain associated with EAL AM393_RS20305 PF00563 EAL domain AM393_RS20310 PF12792 CSS motif domain associated with EAL AM393_RS20310 PF00563 EAL domain AM393_RS20320 PF00970 Oxidoreductase FAD-binding domain AM393_RS20320 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS20320 PF00175 Oxidoreductase NAD-binding domain AM393_RS20325 PF00171 Aldehyde dehydrogenase family AM393_RS20330 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM393_RS20330 PF00355 Rieske [2Fe-2S] domain AM393_RS20335 PF02028 BCCT, betaine/carnitine/choline family transporter AM393_RS20345 PF00180 Isocitrate/isopropylmalate dehydrogenase AM393_RS20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS20350 PF03466 LysR substrate binding domain AM393_RS20355 PF01266 FAD dependent oxidoreductase AM393_RS20360 PF00171 Aldehyde dehydrogenase family AM393_RS20365 PF01381 Helix-turn-helix AM393_RS20365 PF07883 Cupin domain AM393_RS20370 PF07722 Peptidase C26 AM393_RS20375 PF00120 Glutamine synthetase, catalytic domain AM393_RS20385 PF00324 Amino acid permease AM393_RS20405 PF01638 HxlR-like helix-turn-helix AM393_RS20410 PF00328 Histidine phosphatase superfamily (branch 2) AM393_RS20415 PF13993 YccJ-like protein AM393_RS20420 PF03358 NADPH-dependent FMN reductase AM393_RS20425 PF10685 Stress-induced bacterial acidophilic repeat motif AM393_RS20435 PF00860 Permease family AM393_RS20440 PF01613 Flavin reductase like domain AM393_RS20445 PF00881 Nitroreductase family AM393_RS20450 PF00561 alpha/beta hydrolase fold AM393_RS20455 PF01042 Endoribonuclease L-PSP AM393_RS20460 PF00857 Isochorismatase family AM393_RS20465 PF00296 Luciferase-like monooxygenase AM393_RS20470 PF08362 YcdC-like protein, C-terminal region AM393_RS20470 PF00440 Bacterial regulatory proteins, tetR family AM393_RS20480 PF00171 Aldehyde dehydrogenase family AM393_RS20480 PF14850 DNA-binding domain of Proline dehydrogenase AM393_RS20480 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM393_RS20480 PF01619 Proline dehydrogenase AM393_RS20485 PF00474 Sodium:solute symporter family AM393_RS20495 PF07670 Nucleoside recognition AM393_RS20495 PF01773 Na+ dependent nucleoside transporter N-terminus AM393_RS20495 PF07662 Na+ dependent nucleoside transporter C-terminus AM393_RS20500 PF03239 Iron permease FTR1 family AM393_RS20505 PF13473 Cupredoxin-like domain AM393_RS20505 PF09375 Imelysin AM393_RS20510 PF04261 Dyp-type peroxidase family AM393_RS20515 PF02562 PhoH-like protein AM393_RS20520 PF01323 DSBA-like thioredoxin domain AM393_RS20535 PF00857 Isochorismatase family AM393_RS20540 PF02678 Pirin AM393_RS20540 PF05726 Pirin C-terminal cupin domain AM393_RS20545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS20545 PF03466 LysR substrate binding domain AM393_RS20565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS20570 PF02811 PHP domain AM393_RS20575 PF02613 Nitrate reductase delta subunit AM393_RS20580 PF06496 Protein of unknown function (DUF1097) AM393_RS20585 PF01661 Macro domain AM393_RS20590 PF00440 Bacterial regulatory proteins, tetR family AM393_RS20590 PF13977 BetI-type transcriptional repressor, C-terminal AM393_RS20595 PF01757 Acyltransferase family AM393_RS20605 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM393_RS20610 PF00535 Glycosyl transferase family 2 AM393_RS20615 PF07119 Protein of unknown function (DUF1375) AM393_RS20620 PF13984 MsyB protein AM393_RS20625 PF07690 Major Facilitator Superfamily AM393_RS20635 PF03279 Bacterial lipid A biosynthesis acyltransferase AM393_RS20640 PF17773 UPF0176 acylphosphatase like domain AM393_RS20640 PF00581 Rhodanese-like domain AM393_RS20640 PF12368 Rhodanase C-terminal AM393_RS20645 PF10968 Protein of unknown function (DUF2770) AM393_RS20650 PF01266 FAD dependent oxidoreductase AM393_RS20655 PF13991 BssS protein family AM393_RS20665 PF06183 DinI-like family AM393_RS20670 PF01979 Amidohydrolase family AM393_RS20675 PF07273 Protein of unknown function (DUF1439) AM393_RS20680 PF07690 Major Facilitator Superfamily AM393_RS20685 PF13302 Acetyltransferase (GNAT) domain AM393_RS20690 PF04337 Protein of unknown function, DUF480 AM393_RS20695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS20700 PF03023 Lipid II flippase MurJ AM393_RS20705 PF07690 Major Facilitator Superfamily AM393_RS20710 PF03466 LysR substrate binding domain AM393_RS20710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS20715 PF10150 Ribonuclease E/G family AM393_RS20715 PF12111 Polyribonucleotide phosphorylase C terminal AM393_RS20715 PF00575 S1 RNA binding domain AM393_RS20720 PF01479 S4 domain AM393_RS20720 PF00849 RNA pseudouridylate synthase AM393_RS20725 PF02545 Maf-like protein AM393_RS20730 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM393_RS20735 PF01783 Ribosomal L32p protein family AM393_RS20740 PF02504 Fatty acid synthesis protein AM393_RS20745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM393_RS20745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM393_RS20750 PF00698 Acyl transferase domain AM393_RS20760 PF00550 Phosphopantetheine attachment site AM393_RS20765 PF02801 Beta-ketoacyl synthase, C-terminal domain AM393_RS20765 PF00109 Beta-ketoacyl synthase, N-terminal domain AM393_RS20770 PF01063 Amino-transferase class IV AM393_RS20775 PF02618 YceG-like family AM393_RS20780 PF02223 Thymidylate kinase AM393_RS20785 PF09115 DNA polymerase III, delta subunit, C terminal AM393_RS20790 PF01026 TatD related DNase AM393_RS20795 PF00367 phosphotransferase system, EIIB AM393_RS20795 PF02378 Phosphotransferase system, EIIC AM393_RS20800 PF01230 HIT domain AM393_RS20805 PF07233 Protein of unknown function (DUF1425) AM393_RS20810 PF13036 Peptidoglycan-synthase activator LpoB AM393_RS20815 PF01636 Phosphotransferase enzyme family AM393_RS20820 PF00933 Glycosyl hydrolase family 3 N terminal domain AM393_RS20825 PF05728 Uncharacterised protein family (UPF0227) AM393_RS20835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS20840 PF05433 Glycine zipper 2TM domain AM393_RS20845 PF00593 TonB dependent receptor AM393_RS20845 PF07715 TonB-dependent Receptor Plug Domain AM393_RS20850 PF00440 Bacterial regulatory proteins, tetR family AM393_RS20855 PF07338 Protein of unknown function (DUF1471) AM393_RS20860 PF03734 L,D-transpeptidase catalytic domain AM393_RS20860 PF17969 L,D-transpeptidase C-terminal domain AM393_RS20860 PF01476 LysM domain AM393_RS20865 PF17757 UvrB interaction domain AM393_RS20865 PF02559 CarD-like/TRCF domain AM393_RS20865 PF00270 DEAD/DEAH box helicase AM393_RS20865 PF00271 Helicase conserved C-terminal domain AM393_RS20865 PF03461 TRCF domain AM393_RS20870 PF02687 FtsX-like permease family AM393_RS20870 PF12704 MacB-like periplasmic core domain AM393_RS20875 PF00005 ABC transporter AM393_RS20880 PF02687 FtsX-like permease family AM393_RS20880 PF12704 MacB-like periplasmic core domain AM393_RS20885 PF00480 ROK family AM393_RS20890 PF02146 Sir2 family AM393_RS20900 PF00501 AMP-binding enzyme AM393_RS20900 PF13193 AMP-binding enzyme C-terminal domain AM393_RS20910 PF13416 Bacterial extracellular solute-binding protein AM393_RS20915 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS20920 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS20925 PF00005 ABC transporter AM393_RS20925 PF08402 TOBE domain AM393_RS20930 PF07687 Peptidase dimerisation domain AM393_RS20930 PF01546 Peptidase family M20/M25/M40 AM393_RS20935 PF08007 Cupin superfamily protein AM393_RS20940 PF08918 PhoQ Sensor AM393_RS20940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS20945 PF00486 Transcriptional regulatory protein, C terminal AM393_RS20945 PF00072 Response regulator receiver domain AM393_RS20960 PF00206 Lyase AM393_RS20960 PF08328 Adenylosuccinate lyase C-terminal AM393_RS20965 PF04356 Protein of unknown function (DUF489) AM393_RS20975 PF00293 NUDIX domain AM393_RS20980 PF00849 RNA pseudouridylate synthase AM393_RS20985 PF00180 Isocitrate/isopropylmalate dehydrogenase AM393_RS21005 PF06906 Protein of unknown function (DUF1272) AM393_RS21010 PF00107 Zinc-binding dehydrogenase AM393_RS21010 PF13823 Alcohol dehydrogenase GroES-associated AM393_RS21010 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS21015 PF10685 Stress-induced bacterial acidophilic repeat motif AM393_RS21020 PF05974 Domain of unknown function (DUF892) AM393_RS21025 PF05974 Domain of unknown function (DUF892) AM393_RS21030 PF05067 Manganese containing catalase AM393_RS21035 PF01654 Cytochrome bd terminal oxidase subunit I AM393_RS21040 PF02322 Cytochrome bd terminal oxidase subunit II AM393_RS21065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM393_RS21070 PF03466 LysR substrate binding domain AM393_RS21070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21075 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS21080 PF01966 HD domain AM393_RS21085 PF17763 Glutaminase/Asparaginase C-terminal domain AM393_RS21085 PF00710 Asparaginase, N-terminal AM393_RS21095 PF03279 Bacterial lipid A biosynthesis acyltransferase AM393_RS21100 PF01810 LysE type translocator AM393_RS21105 PF10749 Protein of unknown function (DUF2534) AM393_RS21125 PF13185 GAF domain AM393_RS21125 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS21130 PF03891 Domain of unknown function (DUF333) AM393_RS21135 PF04343 Protein of unknown function, DUF488 AM393_RS21140 PF04463 Protein of unknown function (DUF523) AM393_RS21145 PF06418 CTP synthase N-terminus AM393_RS21145 PF00117 Glutamine amidotransferase class-I AM393_RS21150 PF07690 Major Facilitator Superfamily AM393_RS21155 PF12833 Helix-turn-helix domain AM393_RS21155 PF02311 AraC-like ligand binding domain AM393_RS21160 PF04284 Protein of unknown function (DUF441) AM393_RS21165 PF04073 Aminoacyl-tRNA editing domain AM393_RS21170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM393_RS21175 PF06183 DinI-like family AM393_RS21185 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS21190 PF00717 Peptidase S24-like AM393_RS21195 PF11799 impB/mucB/samB family C-terminal domain AM393_RS21195 PF11798 IMS family HHH motif AM393_RS21195 PF00817 impB/mucB/samB family AM393_RS21195 PF13438 Domain of unknown function (DUF4113) AM393_RS21200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21200 PF03466 LysR substrate binding domain AM393_RS21210 PF07690 Major Facilitator Superfamily AM393_RS21215 PF03466 LysR substrate binding domain AM393_RS21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21225 PF00255 Glutathione peroxidase AM393_RS21235 PF04285 Protein of unknown function (DUF444) AM393_RS21240 PF08298 PrkA AAA domain AM393_RS21240 PF06798 PrkA serine protein kinase C-terminal domain AM393_RS21245 PF06629 MltA-interacting protein MipA AM393_RS21250 PF00248 Aldo/keto reductase family AM393_RS21255 PF01263 Aldose 1-epimerase AM393_RS21260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM393_RS21260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM393_RS21265 PF01641 SelR domain AM393_RS21270 PF07023 Protein of unknown function (DUF1315) AM393_RS21275 PF01844 HNH endonuclease AM393_RS21280 PF00704 Glycosyl hydrolases family 18 AM393_RS21280 PF00041 Fibronectin type III domain AM393_RS21285 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS21285 PF00107 Zinc-binding dehydrogenase AM393_RS21290 PF00083 Sugar (and other) transporter AM393_RS21295 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS21295 PF00107 Zinc-binding dehydrogenase AM393_RS21300 PF01116 Fructose-bisphosphate aldolase class-II AM393_RS21305 PF00294 pfkB family carbohydrate kinase AM393_RS21310 PF00248 Aldo/keto reductase family AM393_RS21315 PF08220 DeoR-like helix-turn-helix domain AM393_RS21315 PF00455 DeoR C terminal sensor domain AM393_RS21320 PF00083 Sugar (and other) transporter AM393_RS21325 PF00857 Isochorismatase family AM393_RS21330 PF00710 Asparaginase, N-terminal AM393_RS21330 PF17763 Glutaminase/Asparaginase C-terminal domain AM393_RS21335 PF01343 Peptidase family S49 AM393_RS21340 PF00881 Nitroreductase family AM393_RS21355 PF01569 PAP2 superfamily AM393_RS21360 PF00586 AIR synthase related protein, N-terminal domain AM393_RS21360 PF02769 AIR synthase related protein, C-terminal domain AM393_RS21365 PF01751 Toprim domain AM393_RS21365 PF01131 DNA topoisomerase AM393_RS21370 PF00698 Acyl transferase domain AM393_RS21370 PF00109 Beta-ketoacyl synthase, N-terminal domain AM393_RS21370 PF08659 KR domain AM393_RS21370 PF00550 Phosphopantetheine attachment site AM393_RS21370 PF16197 Ketoacyl-synthetase C-terminal extension AM393_RS21370 PF14765 Polyketide synthase dehydratase AM393_RS21370 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS21370 PF02801 Beta-ketoacyl synthase, C-terminal domain AM393_RS21375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM393_RS21375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM393_RS21380 PF00293 NUDIX domain AM393_RS21385 PF01066 CDP-alcohol phosphatidyltransferase AM393_RS21390 PF00581 Rhodanese-like domain AM393_RS21395 PF00005 ABC transporter AM393_RS21400 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS21405 PF13416 Bacterial extracellular solute-binding protein AM393_RS21410 PF02627 Carboxymuconolactone decarboxylase family AM393_RS21415 PF09335 SNARE associated Golgi protein AM393_RS21420 PF09335 SNARE associated Golgi protein AM393_RS21425 PF03372 Endonuclease/Exonuclease/phosphatase family AM393_RS21430 PF00202 Aminotransferase class-III AM393_RS21435 PF04958 Arginine N-succinyltransferase beta subunit AM393_RS21440 PF00171 Aldehyde dehydrogenase family AM393_RS21445 PF04996 Succinylarginine dihydrolase AM393_RS21450 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM393_RS21455 PF07813 LTXXQ motif family protein AM393_RS21465 PF02540 NAD synthase AM393_RS21470 PF04355 SmpA / OmlA family AM393_RS21475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS21480 PF02378 Phosphotransferase system, EIIC AM393_RS21485 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM393_RS21490 PF12833 Helix-turn-helix domain AM393_RS21490 PF07883 Cupin domain AM393_RS21495 PF02056 Family 4 glycosyl hydrolase AM393_RS21495 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS21500 PF04794 YdjC-like protein AM393_RS21505 PF00199 Catalase AM393_RS21505 PF06628 Catalase-related immune-responsive AM393_RS21505 PF18011 C-terminal domain found in long catalases AM393_RS21510 PF10729 Cell division activator CedA AM393_RS21515 PF00375 Sodium:dicarboxylate symporter family AM393_RS21520 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM393_RS21530 PF13419 Haloacid dehalogenase-like hydrolase AM393_RS21535 PF14002 YniB-like protein AM393_RS21540 PF03061 Thioesterase superfamily AM393_RS21545 PF07715 TonB-dependent Receptor Plug Domain AM393_RS21545 PF00593 TonB dependent receptor AM393_RS21550 PF04279 Intracellular septation protein A AM393_RS21560 PF03692 Putative zinc- or iron-chelating domain AM393_RS21565 PF03922 OmpW family AM393_RS21570 PF18331 PKHD-type hydroxylase C-terminal domain AM393_RS21570 PF13640 2OG-Fe(II) oxygenase superfamily AM393_RS21575 PF07715 TonB-dependent Receptor Plug Domain AM393_RS21575 PF00593 TonB dependent receptor AM393_RS21580 PF00106 short chain dehydrogenase AM393_RS21600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21600 PF03466 LysR substrate binding domain AM393_RS21605 PF07690 Major Facilitator Superfamily AM393_RS21610 PF00180 Isocitrate/isopropylmalate dehydrogenase AM393_RS21615 PF05161 MOFRL family AM393_RS21615 PF13660 Domain of unknown function (DUF4147) AM393_RS21620 PF00290 Tryptophan synthase alpha chain AM393_RS21625 PF00291 Pyridoxal-phosphate dependent enzyme AM393_RS21630 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM393_RS21630 PF00218 Indole-3-glycerol phosphate synthase AM393_RS21635 PF00117 Glutamine amidotransferase class-I AM393_RS21635 PF02885 Glycosyl transferase family, helical bundle domain AM393_RS21635 PF00591 Glycosyl transferase family, a/b domain AM393_RS21640 PF00425 chorismate binding enzyme AM393_RS21640 PF04715 Anthranilate synthase component I, N terminal region AM393_RS21645 PF02811 PHP domain AM393_RS21650 PF01300 Telomere recombination AM393_RS21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21660 PF03466 LysR substrate binding domain AM393_RS21665 PF01479 S4 domain AM393_RS21665 PF00849 RNA pseudouridylate synthase AM393_RS21670 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM393_RS21670 PF12557 Cob(I)alamin adenosyltransferase N terminal AM393_RS21675 PF00106 short chain dehydrogenase AM393_RS21685 PF08496 Peptidase family S49 N-terminal AM393_RS21685 PF01343 Peptidase family S49 AM393_RS21690 PF10692 Protein of unknown function (DUF2498) AM393_RS21700 PF08272 Topoisomerase I zinc-ribbon-like AM393_RS21700 PF01131 DNA topoisomerase AM393_RS21700 PF01751 Toprim domain AM393_RS21700 PF01396 Topoisomerase DNA binding C4 zinc finger AM393_RS21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21705 PF03466 LysR substrate binding domain AM393_RS21720 PF00330 Aconitase family (aconitate hydratase) AM393_RS21720 PF00694 Aconitase C-terminal domain AM393_RS21725 PF00925 GTP cyclohydrolase II AM393_RS21730 PF01569 PAP2 superfamily AM393_RS21735 PF06305 Lipopolysaccharide assembly protein A domain AM393_RS21740 PF18073 Rubredoxin metal binding domain AM393_RS21745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM393_RS21750 PF01253 Translation initiation factor SUI1 AM393_RS21755 PF05433 Glycine zipper 2TM domain AM393_RS21760 PF00455 DeoR C terminal sensor domain AM393_RS21760 PF08220 DeoR-like helix-turn-helix domain AM393_RS21770 PF00773 RNB domain AM393_RS21770 PF00575 S1 RNA binding domain AM393_RS21770 PF17876 Cold shock domain AM393_RS21770 PF08206 Ribonuclease B OB domain AM393_RS21785 PF05962 HutD AM393_RS21795 PF00005 ABC transporter AM393_RS21800 PF00005 ABC transporter AM393_RS21800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS21805 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS21805 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS21810 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS21815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS21820 PF13460 NAD(P)H-binding AM393_RS21830 PF12833 Helix-turn-helix domain AM393_RS21835 PF01546 Peptidase family M20/M25/M40 AM393_RS21835 PF07687 Peptidase dimerisation domain AM393_RS21840 PF07690 Major Facilitator Superfamily AM393_RS21845 PF02954 Bacterial regulatory protein, Fis family AM393_RS21845 PF00158 Sigma-54 interaction domain AM393_RS21850 PF04012 PspA/IM30 family AM393_RS21855 PF06667 Phage shock protein B AM393_RS21860 PF04024 PspC domain AM393_RS21865 PF09584 Phage shock protein PspD (Phageshock_PspD) AM393_RS21870 PF04317 YcjX-like family, DUF463 AM393_RS21875 PF05128 Domain of unknown function (DUF697) AM393_RS21880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21880 PF03466 LysR substrate binding domain AM393_RS21885 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS21885 PF02056 Family 4 glycosyl hydrolase AM393_RS21890 PF18024 Helix-turn-helix domain AM393_RS21890 PF00158 Sigma-54 interaction domain AM393_RS21895 PF05145 Transition state regulatory protein AbrB AM393_RS21900 PF08534 Redoxin AM393_RS21905 PF13378 Enolase C-terminal domain-like AM393_RS21905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM393_RS21910 PF00246 Zinc carboxypeptidase AM393_RS21915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS21930 PF03466 LysR substrate binding domain AM393_RS21930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21935 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM393_RS21940 PF07690 Major Facilitator Superfamily AM393_RS21945 PF00248 Aldo/keto reductase family AM393_RS21965 PF03466 LysR substrate binding domain AM393_RS21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS21975 PF01966 HD domain AM393_RS21980 PF01965 DJ-1/PfpI family AM393_RS21985 PF13356 Arm DNA-binding domain AM393_RS21985 PF14659 Phage integrase, N-terminal SAM-like domain AM393_RS21985 PF00589 Phage integrase family AM393_RS22055 PF00717 Peptidase S24-like AM393_RS22055 PF01381 Helix-turn-helix AM393_RS22085 PF03589 Antitermination protein AM393_RS22095 PF00959 Phage lysozyme AM393_RS22115 PF04466 Phage terminase large subunit AM393_RS22115 PF17288 Terminase RNAseH like domain AM393_RS22130 PF06381 Protein of unknown function (DUF1073) AM393_RS22200 PF01551 Peptidase family M23 AM393_RS22200 PF10145 Phage-related minor tail protein AM393_RS22200 PF01464 Transglycosylase SLT domain AM393_RS22290 PF06183 DinI-like family AM393_RS22300 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM393_RS22315 PF00691 OmpA family AM393_RS22315 PF13488 Glycine zipper AM393_RS22325 PF00004 ATPase family associated with various cellular activities (AAA) AM393_RS22325 PF17871 AAA lid domain AM393_RS22325 PF10431 C-terminal, D2-small domain, of ClpB protein AM393_RS22325 PF07724 AAA domain (Cdc48 subfamily) AM393_RS22330 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM393_RS22330 PF04717 Type VI secretion system, phage-baseplate injector AM393_RS22330 PF13296 Putative type VI secretion system Rhs element Vgr AM393_RS22420 PF00440 Bacterial regulatory proteins, tetR family AM393_RS22445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS22445 PF03466 LysR substrate binding domain AM393_RS22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS22450 PF03466 LysR substrate binding domain AM393_RS22455 PF00753 Metallo-beta-lactamase superfamily AM393_RS22465 PF00440 Bacterial regulatory proteins, tetR family AM393_RS22470 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS22470 PF00107 Zinc-binding dehydrogenase AM393_RS22475 PF00155 Aminotransferase class I and II AM393_RS22480 PF03180 NLPA lipoprotein AM393_RS22485 PF09383 NIL domain AM393_RS22485 PF00005 ABC transporter AM393_RS22490 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS22495 PF00155 Aminotransferase class I and II AM393_RS22505 PF01037 Lrp/AsnC ligand binding domain AM393_RS22510 PF00324 Amino acid permease AM393_RS22525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS22525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS22530 PF00455 DeoR C terminal sensor domain AM393_RS22530 PF08220 DeoR-like helix-turn-helix domain AM393_RS22540 PF01544 CorA-like Mg2+ transporter protein AM393_RS22550 PF00271 Helicase conserved C-terminal domain AM393_RS22550 PF03880 DbpA RNA binding domain AM393_RS22550 PF00270 DEAD/DEAH box helicase AM393_RS22555 PF01171 PP-loop family AM393_RS22560 PF00582 Universal stress protein family AM393_RS22570 PF00267 Gram-negative porin AM393_RS22575 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM393_RS22575 PF10371 Domain of unknown function AM393_RS22575 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM393_RS22575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS22575 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM393_RS22585 PF03891 Domain of unknown function (DUF333) AM393_RS22590 PF03724 META domain AM393_RS22595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM393_RS22595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM393_RS22600 PF09335 SNARE associated Golgi protein AM393_RS22605 PF11739 Dicarboxylate transport AM393_RS22610 PF13617 YnbE-like lipoprotein AM393_RS22615 PF07027 Protein of unknown function (DUF1318) AM393_RS22620 PF12833 Helix-turn-helix domain AM393_RS22620 PF14525 AraC-binding-like domain AM393_RS22625 PF00171 Aldehyde dehydrogenase family AM393_RS22630 PF02558 Ketopantoate reductase PanE/ApbA AM393_RS22630 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM393_RS22640 PF01179 Copper amine oxidase, enzyme domain AM393_RS22640 PF07833 Copper amine oxidase N-terminal domain AM393_RS22640 PF02727 Copper amine oxidase, N2 domain AM393_RS22640 PF02728 Copper amine oxidase, N3 domain AM393_RS22650 PF01575 MaoC like domain AM393_RS22650 PF00171 Aldehyde dehydrogenase family AM393_RS22655 PF05138 Phenylacetic acid catabolic protein AM393_RS22660 PF06243 Phenylacetic acid degradation B AM393_RS22665 PF05138 Phenylacetic acid catabolic protein AM393_RS22670 PF01883 Iron-sulfur cluster assembly protein AM393_RS22675 PF00175 Oxidoreductase NAD-binding domain AM393_RS22675 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS22675 PF00970 Oxidoreductase FAD-binding domain AM393_RS22680 PF00378 Enoyl-CoA hydratase/isomerase AM393_RS22685 PF00378 Enoyl-CoA hydratase/isomerase AM393_RS22690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM393_RS22690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM393_RS22690 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM393_RS22695 PF03061 Thioesterase superfamily AM393_RS22700 PF02803 Thiolase, C-terminal domain AM393_RS22700 PF00108 Thiolase, N-terminal domain AM393_RS22705 PF14535 AMP-binding enzyme C-terminal domain AM393_RS22705 PF00501 AMP-binding enzyme AM393_RS22710 PF07848 PaaX-like protein AM393_RS22710 PF08223 PaaX-like protein C-terminal domain AM393_RS22715 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS22725 PF02525 Flavodoxin-like fold AM393_RS22730 PF11898 Domain of unknown function (DUF3418) AM393_RS22730 PF04408 Helicase associated domain (HA2) AM393_RS22730 PF00271 Helicase conserved C-terminal domain AM393_RS22730 PF00270 DEAD/DEAH box helicase AM393_RS22730 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM393_RS22735 PF01596 O-methyltransferase AM393_RS22740 PF02321 Outer membrane efflux protein AM393_RS22745 PF13533 Biotin-lipoyl like AM393_RS22760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS22760 PF03466 LysR substrate binding domain AM393_RS22765 PF00248 Aldo/keto reductase family AM393_RS22770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM393_RS22770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM393_RS22775 PF00202 Aminotransferase class-III AM393_RS22780 PF04958 Arginine N-succinyltransferase beta subunit AM393_RS22785 PF00171 Aldehyde dehydrogenase family AM393_RS22790 PF04996 Succinylarginine dihydrolase AM393_RS22795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM393_RS22800 PF00324 Amino acid permease AM393_RS22805 PF00083 Sugar (and other) transporter AM393_RS22805 PF07690 Major Facilitator Superfamily AM393_RS22810 PF02698 DUF218 domain AM393_RS22815 PF00171 Aldehyde dehydrogenase family AM393_RS22820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM393_RS22820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM393_RS22825 PF01679 Proteolipid membrane potential modulator AM393_RS22830 PF07166 Protein of unknown function (DUF1398) AM393_RS22835 PF01206 Sulfurtransferase TusA AM393_RS22840 PF04143 Sulphur transport AM393_RS22855 PF14001 YdfZ protein AM393_RS22865 PF00155 Aminotransferase class I and II AM393_RS22870 PF00367 phosphotransferase system, EIIB AM393_RS22870 PF02378 Phosphotransferase system, EIIC AM393_RS22875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM393_RS22875 PF00356 Bacterial regulatory proteins, lacI family AM393_RS22880 PF06097 Bacterial protein of unknown function (DUF945) AM393_RS22885 PF01238 Phosphomannose isomerase type I AM393_RS22890 PF05683 Fumarase C-terminus AM393_RS22890 PF05681 Fumarate hydratase (Fumerase) AM393_RS22895 PF00206 Lyase AM393_RS22895 PF10415 Fumarase C C-terminus AM393_RS22900 PF05472 DNA replication terminus site-binding protein (Ter protein) AM393_RS22905 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS22905 PF00672 HAMP domain AM393_RS22905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS22915 PF00486 Transcriptional regulatory protein, C terminal AM393_RS22915 PF00072 Response regulator receiver domain AM393_RS22920 PF06942 GlpM protein AM393_RS22930 PF13520 Amino acid permease AM393_RS22940 PF07338 Protein of unknown function (DUF1471) AM393_RS22950 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM393_RS22950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM393_RS22950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM393_RS22955 PF02233 NAD(P) transhydrogenase beta subunit AM393_RS22960 PF15930 Domain of unknown function AM393_RS22965 PF00582 Universal stress protein family AM393_RS22970 PF00027 Cyclic nucleotide-binding domain AM393_RS22970 PF00325 Bacterial regulatory proteins, crp family AM393_RS22975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM393_RS22975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM393_RS22985 PF03806 AbgT putative transporter family AM393_RS22990 PF01546 Peptidase family M20/M25/M40 AM393_RS22995 PF01546 Peptidase family M20/M25/M40 AM393_RS22995 PF07687 Peptidase dimerisation domain AM393_RS23000 PF03466 LysR substrate binding domain AM393_RS23000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23005 PF01713 Smr domain AM393_RS23010 PF09339 IclR helix-turn-helix domain AM393_RS23010 PF01614 Bacterial transcriptional regulator AM393_RS23015 PF01144 Coenzyme A transferase AM393_RS23020 PF01144 Coenzyme A transferase AM393_RS23025 PF00108 Thiolase, N-terminal domain AM393_RS23025 PF02803 Thiolase, C-terminal domain AM393_RS23030 PF10397 Adenylosuccinate lyase C-terminus AM393_RS23030 PF00206 Lyase AM393_RS23035 PF12146 Serine aminopeptidase, S33 AM393_RS23040 PF02627 Carboxymuconolactone decarboxylase family AM393_RS23060 PF05683 Fumarase C-terminus AM393_RS23060 PF05681 Fumarate hydratase (Fumerase) AM393_RS23065 PF00939 Sodium:sulfate symporter transmembrane region AM393_RS23075 PF00890 FAD binding domain AM393_RS23075 PF14537 Cytochrome c3 AM393_RS23080 PF02424 ApbE family AM393_RS23085 PF00072 Response regulator receiver domain AM393_RS23090 PF17203 Single cache domain 3 AM393_RS23090 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM393_RS23090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS23090 PF00989 PAS fold AM393_RS23100 PF13580 SIS domain AM393_RS23105 PF06039 Malate:quinone oxidoreductase (Mqo) AM393_RS23110 PF03466 LysR substrate binding domain AM393_RS23110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23115 PF00698 Acyl transferase domain AM393_RS23120 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM393_RS23125 PF03547 Membrane transport protein AM393_RS23135 PF01039 Carboxyl transferase domain AM393_RS23140 PF06857 Malonate decarboxylase delta subunit (MdcD) AM393_RS23145 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM393_RS23150 PF16957 Malonate decarboxylase, alpha subunit, transporter AM393_RS23155 PF01594 AI-2E family transporter AM393_RS23165 PF00893 Small Multidrug Resistance protein AM393_RS23170 PF00893 Small Multidrug Resistance protein AM393_RS23180 PF00089 Trypsin AM393_RS23195 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AM393_RS23200 PF07690 Major Facilitator Superfamily AM393_RS23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23205 PF03466 LysR substrate binding domain AM393_RS23210 PF00480 ROK family AM393_RS23220 PF00654 Voltage gated chloride channel AM393_RS23225 PF02613 Nitrate reductase delta subunit AM393_RS23230 PF04976 DMSO reductase anchor subunit (DmsC) AM393_RS23235 PF13247 4Fe-4S dicluster domain AM393_RS23235 PF12800 4Fe-4S binding domain AM393_RS23245 PF06649 Protein of unknown function (DUF1161) AM393_RS23250 PF06788 Uncharacterised protein family (UPF0257) AM393_RS23255 PF13302 Acetyltransferase (GNAT) domain AM393_RS23260 PF06932 Protein of unknown function (DUF1283) AM393_RS23265 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM393_RS23270 PF07690 Major Facilitator Superfamily AM393_RS23275 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS23275 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS23280 PF00582 Universal stress protein family AM393_RS23285 PF07729 FCD domain AM393_RS23285 PF00392 Bacterial regulatory proteins, gntR family AM393_RS23290 PF00106 short chain dehydrogenase AM393_RS23295 PF01432 Peptidase family M3 AM393_RS23305 PF12833 Helix-turn-helix domain AM393_RS23305 PF02311 AraC-like ligand binding domain AM393_RS23310 PF02586 SOS response associated peptidase (SRAP) AM393_RS23315 PF00072 Response regulator receiver domain AM393_RS23315 PF00196 Bacterial regulatory proteins, luxR family AM393_RS23330 PF00011 Hsp20/alpha crystallin family AM393_RS23335 PF02464 Competence-damaged protein AM393_RS23340 PF00563 EAL domain AM393_RS23340 PF04940 Sensors of blue-light using FAD AM393_RS23355 PF12833 Helix-turn-helix domain AM393_RS23360 PF02447 GntP family permease AM393_RS23365 PF01261 Xylose isomerase-like TIM barrel AM393_RS23370 PF00596 Class II Aldolase and Adducin N-terminal domain AM393_RS23375 PF07005 Sugar-binding N-terminal domain AM393_RS23375 PF17042 Nucleotide-binding C-terminal domain AM393_RS23380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM393_RS23380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM393_RS23385 PF08220 DeoR-like helix-turn-helix domain AM393_RS23385 PF00455 DeoR C terminal sensor domain AM393_RS23400 PF02463 RecF/RecN/SMC N terminal domain AM393_RS23405 PF01306 LacY proton/sugar symporter AM393_RS23410 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM393_RS23410 PF00703 Glycosyl hydrolases family 2 AM393_RS23410 PF16353 Domain of unknown function(DUF4981) AM393_RS23410 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM393_RS23410 PF02929 Beta galactosidase small chain AM393_RS23415 PF00356 Bacterial regulatory proteins, lacI family AM393_RS23430 PF12833 Helix-turn-helix domain AM393_RS23430 PF01965 DJ-1/PfpI family AM393_RS23440 PF01717 Cobalamin-independent synthase, Catalytic domain AM393_RS23445 PF13458 Periplasmic binding protein AM393_RS23450 PF02653 Branched-chain amino acid transport system / permease component AM393_RS23455 PF02653 Branched-chain amino acid transport system / permease component AM393_RS23460 PF00005 ABC transporter AM393_RS23460 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM393_RS23465 PF00005 ABC transporter AM393_RS23475 PF07690 Major Facilitator Superfamily AM393_RS23480 PF00892 EamA-like transporter family AM393_RS23485 PF13999 MarB protein AM393_RS23490 PF12833 Helix-turn-helix domain AM393_RS23495 PF01047 MarR family AM393_RS23500 PF01914 MarC family integral membrane protein AM393_RS23505 PF07690 Major Facilitator Superfamily AM393_RS23510 PF02567 Phenazine biosynthesis-like protein AM393_RS23520 PF04074 YhcH/YjgK/YiaL AM393_RS23535 PF00701 Dihydrodipicolinate synthetase family AM393_RS23540 PF00465 Iron-containing alcohol dehydrogenase AM393_RS23545 PF07005 Sugar-binding N-terminal domain AM393_RS23545 PF17042 Nucleotide-binding C-terminal domain AM393_RS23550 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM393_RS23555 PF08220 DeoR-like helix-turn-helix domain AM393_RS23555 PF00455 DeoR C terminal sensor domain AM393_RS23560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM393_RS23560 PF00056 lactate/malate dehydrogenase, NAD binding domain AM393_RS23565 PF00583 Acetyltransferase (GNAT) family AM393_RS23570 PF03466 LysR substrate binding domain AM393_RS23570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23575 PF00171 Aldehyde dehydrogenase family AM393_RS23580 PF04960 Glutaminase AM393_RS23585 PF13811 Domain of unknown function (DUF4186) AM393_RS23590 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS23600 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS23600 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS23605 PF01232 Mannitol dehydrogenase Rossmann domain AM393_RS23605 PF08125 Mannitol dehydrogenase C-terminal domain AM393_RS23610 PF00583 Acetyltransferase (GNAT) family AM393_RS23650 PF13649 Methyltransferase domain AM393_RS23660 PF07690 Major Facilitator Superfamily AM393_RS23675 PF06779 Uncharacterised MFS-type transporter YbfB AM393_RS23680 PF03466 LysR substrate binding domain AM393_RS23680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23685 PF03060 Nitronate monooxygenase AM393_RS23690 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS23695 PF00005 ABC transporter AM393_RS23695 PF09383 NIL domain AM393_RS23700 PF03180 NLPA lipoprotein AM393_RS23710 PF09905 DNA-binding protein VF530 AM393_RS23725 PF12833 Helix-turn-helix domain AM393_RS23730 PF07690 Major Facilitator Superfamily AM393_RS23735 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS23740 PF00355 Rieske [2Fe-2S] domain AM393_RS23745 PF03466 LysR substrate binding domain AM393_RS23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23750 PF01494 FAD binding domain AM393_RS23755 PF00860 Permease family AM393_RS23760 PF01014 Uricase AM393_RS23760 PF09349 OHCU decarboxylase AM393_RS23765 PF00576 HIUase/Transthyretin family AM393_RS23770 PF01381 Helix-turn-helix AM393_RS23775 PF07804 HipA-like C-terminal domain AM393_RS23775 PF13657 HipA N-terminal domain AM393_RS23780 PF02638 Glycosyl hydrolase-like 10 AM393_RS23790 PF13954 PapC N-terminal domain AM393_RS23790 PF00577 Outer membrane usher protein AM393_RS23790 PF13953 PapC C-terminal domain AM393_RS23795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM393_RS23795 PF02753 Pili assembly chaperone PapD, C-terminal domain AM393_RS23810 PF00557 Metallopeptidase family M24 AM393_RS23825 PF03707 Bacterial signalling protein N terminal repeat AM393_RS23825 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS23825 PF00563 EAL domain AM393_RS23825 PF13188 PAS domain AM393_RS23830 PF00756 Putative esterase AM393_RS23840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS23840 PF00381 PTS HPr component phosphorylation site AM393_RS23845 PF00083 Sugar (and other) transporter AM393_RS23855 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM393_RS23855 PF02056 Family 4 glycosyl hydrolase AM393_RS23860 PF00367 phosphotransferase system, EIIB AM393_RS23860 PF02378 Phosphotransferase system, EIIC AM393_RS23865 PF00392 Bacterial regulatory proteins, gntR family AM393_RS23865 PF07729 FCD domain AM393_RS23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS23875 PF03466 LysR substrate binding domain AM393_RS23880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM393_RS23880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM393_RS23885 PF17853 GGDEF-like domain AM393_RS23885 PF13556 PucR C-terminal helix-turn-helix domain AM393_RS23885 PF05651 Putative sugar diacid recognition AM393_RS23890 PF02595 Glycerate kinase family AM393_RS23900 PF08450 SMP-30/Gluconolactonase/LRE-like region AM393_RS23905 PF07690 Major Facilitator Superfamily AM393_RS23910 PF00108 Thiolase, N-terminal domain AM393_RS23910 PF02803 Thiolase, C-terminal domain AM393_RS23920 PF01144 Coenzyme A transferase AM393_RS23925 PF00501 AMP-binding enzyme AM393_RS23925 PF13193 AMP-binding enzyme C-terminal domain AM393_RS23935 PF07690 Major Facilitator Superfamily AM393_RS23940 PF00294 pfkB family carbohydrate kinase AM393_RS23945 PF00834 Ribulose-phosphate 3 epimerase family AM393_RS23950 PF08220 DeoR-like helix-turn-helix domain AM393_RS23950 PF00455 DeoR C terminal sensor domain AM393_RS23955 PF01791 DeoC/LacD family aldolase AM393_RS23960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM393_RS23960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM393_RS23965 PF00455 DeoR C terminal sensor domain AM393_RS23965 PF08220 DeoR-like helix-turn-helix domain AM393_RS23980 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM393_RS23990 PF01965 DJ-1/PfpI family AM393_RS23990 PF12833 Helix-turn-helix domain AM393_RS23995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM393_RS23995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM393_RS24010 PF00248 Aldo/keto reductase family AM393_RS24020 PF00248 Aldo/keto reductase family AM393_RS24025 PF00248 Aldo/keto reductase family AM393_RS24030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24030 PF03466 LysR substrate binding domain AM393_RS24035 PF13673 Acetyltransferase (GNAT) domain AM393_RS24035 PF04229 GrpB protein AM393_RS24040 PF14532 Sigma-54 interaction domain AM393_RS24040 PF00072 Response regulator receiver domain AM393_RS24040 PF02954 Bacterial regulatory protein, Fis family AM393_RS24045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS24045 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS24045 PF00672 HAMP domain AM393_RS24060 PF07690 Major Facilitator Superfamily AM393_RS24065 PF00258 Flavodoxin AM393_RS24065 PF01613 Flavin reductase like domain AM393_RS24075 PF07690 Major Facilitator Superfamily AM393_RS24080 PF01476 LysM domain AM393_RS24080 PF04972 BON domain AM393_RS24100 PF00294 pfkB family carbohydrate kinase AM393_RS24110 PF00356 Bacterial regulatory proteins, lacI family AM393_RS24115 PF00005 ABC transporter AM393_RS24120 PF02653 Branched-chain amino acid transport system / permease component AM393_RS24125 PF02126 Phosphotriesterase family AM393_RS24135 PF07687 Peptidase dimerisation domain AM393_RS24135 PF01546 Peptidase family M20/M25/M40 AM393_RS24145 PF00753 Metallo-beta-lactamase superfamily AM393_RS24150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24150 PF03466 LysR substrate binding domain AM393_RS24155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24155 PF03466 LysR substrate binding domain AM393_RS24165 PF01810 LysE type translocator AM393_RS24170 PF02378 Phosphotransferase system, EIIC AM393_RS24170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS24175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS24185 PF00834 Ribulose-phosphate 3 epimerase family AM393_RS24190 PF13737 Transposase DDE domain AM393_RS24195 PF03611 PTS system sugar-specific permease component AM393_RS24205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM393_RS24210 PF00356 Bacterial regulatory proteins, lacI family AM393_RS24220 PF07690 Major Facilitator Superfamily AM393_RS24235 PF00440 Bacterial regulatory proteins, tetR family AM393_RS24250 PF00083 Sugar (and other) transporter AM393_RS24250 PF07690 Major Facilitator Superfamily AM393_RS24255 PF13454 FAD-NAD(P)-binding AM393_RS24260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM393_RS24270 PF03466 LysR substrate binding domain AM393_RS24270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24275 PF03060 Nitronate monooxygenase AM393_RS24280 PF07687 Peptidase dimerisation domain AM393_RS24280 PF01546 Peptidase family M20/M25/M40 AM393_RS24285 PF00266 Aminotransferase class-V AM393_RS24290 PF00005 ABC transporter AM393_RS24295 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS24300 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS24325 PF01425 Amidase AM393_RS24340 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM393_RS24340 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM393_RS24350 PF13533 Biotin-lipoyl like AM393_RS24355 PF07690 Major Facilitator Superfamily AM393_RS24360 PF00109 Beta-ketoacyl synthase, N-terminal domain AM393_RS24360 PF02801 Beta-ketoacyl synthase, C-terminal domain AM393_RS24385 PF00117 Glutamine amidotransferase class-I AM393_RS24390 PF00106 short chain dehydrogenase AM393_RS24395 PF00857 Isochorismatase family AM393_RS24400 PF00300 Histidine phosphatase superfamily (branch 1) AM393_RS24425 PF01177 Asp/Glu/Hydantoin racemase AM393_RS24435 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM393_RS24440 PF01979 Amidohydrolase family AM393_RS24445 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS24445 PF08448 PAS fold AM393_RS24450 PF00356 Bacterial regulatory proteins, lacI family AM393_RS24460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS24460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS24470 PF03070 TENA/THI-4/PQQC family AM393_RS24475 PF00005 ABC transporter AM393_RS24480 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS24485 PF09084 NMT1/THI5 like AM393_RS24490 PF00202 Aminotransferase class-III AM393_RS24495 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM393_RS24505 PF17991 Thioredoxin like C-terminal domain AM393_RS24505 PF00578 AhpC/TSA family AM393_RS24505 PF02683 Cytochrome C biogenesis protein transmembrane region AM393_RS24510 PF00672 HAMP domain AM393_RS24510 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS24510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS24515 PF00072 Response regulator receiver domain AM393_RS24515 PF00486 Transcriptional regulatory protein, C terminal AM393_RS24520 PF00561 alpha/beta hydrolase fold AM393_RS24525 PF01244 Membrane dipeptidase (Peptidase family M19) AM393_RS24530 PF08042 PqqA family AM393_RS24535 PF12706 Beta-lactamase superfamily domain AM393_RS24540 PF03070 TENA/THI-4/PQQC family AM393_RS24545 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM393_RS24550 PF13186 Iron-sulfur cluster-binding domain AM393_RS24550 PF04055 Radical SAM superfamily AM393_RS24555 PF00675 Insulinase (Peptidase family M16) AM393_RS24560 PF00958 GMP synthase C terminal domain AM393_RS24560 PF00117 Glutamine amidotransferase class-I AM393_RS24560 PF02540 NAD synthase AM393_RS24565 PF00905 Penicillin binding protein transpeptidase domain AM393_RS24565 PF03717 Penicillin-binding Protein dimerisation domain AM393_RS24580 PF03466 LysR substrate binding domain AM393_RS24580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24585 PF00141 Peroxidase AM393_RS24590 PF03969 AFG1-like ATPase AM393_RS24595 PF02308 MgtC family AM393_RS24605 PF00083 Sugar (and other) transporter AM393_RS24610 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM393_RS24615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM393_RS24640 PF02378 Phosphotransferase system, EIIC AM393_RS24645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24645 PF03466 LysR substrate binding domain AM393_RS24650 PF00384 Molybdopterin oxidoreductase AM393_RS24655 PF01062 Bestrophin, RFP-TM, chloride channel AM393_RS24660 PF16916 Dimerisation domain of Zinc Transporter AM393_RS24660 PF01545 Cation efflux family AM393_RS24680 PF02566 OsmC-like protein AM393_RS24690 PF04076 Bacterial OB fold (BOF) protein AM393_RS24700 PF04239 Protein of unknown function (DUF421) AM393_RS24705 PF00106 short chain dehydrogenase AM393_RS24720 PF05974 Domain of unknown function (DUF892) AM393_RS24735 PF10685 Stress-induced bacterial acidophilic repeat motif AM393_RS24745 PF10820 Protein of unknown function (DUF2543) AM393_RS24750 PF03466 LysR substrate binding domain AM393_RS24750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS24760 PF08136 30S ribosomal protein subunit S22 family AM393_RS24765 PF00390 Malic enzyme, N-terminal domain AM393_RS24765 PF03949 Malic enzyme, NAD binding domain AM393_RS24780 PF12848 ABC transporter AM393_RS24780 PF00005 ABC transporter AM393_RS24790 PF00719 Inorganic pyrophosphatase AM393_RS24795 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS24795 PF00107 Zinc-binding dehydrogenase AM393_RS24800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS24805 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS24810 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS24810 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS24815 PF00005 ABC transporter AM393_RS24815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS24820 PF00296 Luciferase-like monooxygenase AM393_RS24830 PF07690 Major Facilitator Superfamily AM393_RS24840 PF03976 Polyphosphate kinase 2 (PPK2) AM393_RS24855 PF01292 Prokaryotic cytochrome b561 AM393_RS24860 PF09163 Formate dehydrogenase N, transmembrane AM393_RS24860 PF13247 4Fe-4S dicluster domain AM393_RS24860 PF12800 4Fe-4S binding domain AM393_RS24870 PF00892 EamA-like transporter family AM393_RS24875 PF00106 short chain dehydrogenase AM393_RS24880 PF00175 Oxidoreductase NAD-binding domain AM393_RS24880 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS24880 PF00970 Oxidoreductase FAD-binding domain AM393_RS24885 PF00866 Ring hydroxylating beta subunit AM393_RS24890 PF00355 Rieske [2Fe-2S] domain AM393_RS24890 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM393_RS24895 PF04444 Catechol dioxygenase N terminus AM393_RS24895 PF00775 Dioxygenase AM393_RS24900 PF02426 Muconolactone delta-isomerase AM393_RS24905 PF13378 Enolase C-terminal domain-like AM393_RS24905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM393_RS24910 PF09339 IclR helix-turn-helix domain AM393_RS24910 PF01614 Bacterial transcriptional regulator AM393_RS24915 PF07690 Major Facilitator Superfamily AM393_RS24925 PF07690 Major Facilitator Superfamily AM393_RS24930 PF01568 Molydopterin dinucleotide binding domain AM393_RS24930 PF14710 Respiratory nitrate reductase alpha N-terminal AM393_RS24930 PF00384 Molybdopterin oxidoreductase AM393_RS24935 PF14711 Respiratory nitrate reductase beta C-terminal AM393_RS24935 PF13247 4Fe-4S dicluster domain AM393_RS24940 PF02613 Nitrate reductase delta subunit AM393_RS24945 PF02665 Nitrate reductase gamma subunit AM393_RS24950 PF00797 N-acetyltransferase AM393_RS24955 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS24965 PF00005 ABC transporter AM393_RS24965 PF17912 MalK OB fold domain AM393_RS24970 PF01613 Flavin reductase like domain AM393_RS24975 PF12833 Helix-turn-helix domain AM393_RS24975 PF02311 AraC-like ligand binding domain AM393_RS24990 PF02264 LamB porin AM393_RS24990 PF11471 Maltoporin periplasmic N-terminal extension AM393_RS25010 PF01361 Tautomerase enzyme AM393_RS25015 PF13417 Glutathione S-transferase, N-terminal domain AM393_RS25025 PF00005 ABC transporter AM393_RS25030 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS25040 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS25045 PF00296 Luciferase-like monooxygenase AM393_RS25050 PF01546 Peptidase family M20/M25/M40 AM393_RS25050 PF07687 Peptidase dimerisation domain AM393_RS25055 PF00296 Luciferase-like monooxygenase AM393_RS25060 PF01202 Shikimate kinase AM393_RS25070 PF00324 Amino acid permease AM393_RS25085 PF00593 TonB dependent receptor AM393_RS25085 PF07715 TonB-dependent Receptor Plug Domain AM393_RS25090 PF01979 Amidohydrolase family AM393_RS25095 PF04175 Protein of unknown function (DUF406) AM393_RS25105 PF01156 Inosine-uridine preferring nucleoside hydrolase AM393_RS25110 PF00107 Zinc-binding dehydrogenase AM393_RS25110 PF16884 N-terminal domain of oxidoreductase AM393_RS25115 PF08671 Anti-repressor SinI AM393_RS25115 PF01381 Helix-turn-helix AM393_RS25120 PF00583 Acetyltransferase (GNAT) family AM393_RS25125 PF04657 Putative inner membrane exporter, YdcZ AM393_RS25130 PF10735 Protein of unknown function (DUF2526) AM393_RS25135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS25140 PF00171 Aldehyde dehydrogenase family AM393_RS25145 PF00364 Biotin-requiring enzyme AM393_RS25145 PF00561 alpha/beta hydrolase fold AM393_RS25150 PF10753 Toxin GhoT_OrtT AM393_RS25175 PF00171 Aldehyde dehydrogenase family AM393_RS25180 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS25185 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS25190 PF08402 TOBE domain AM393_RS25190 PF00005 ABC transporter AM393_RS25195 PF13416 Bacterial extracellular solute-binding protein AM393_RS25200 PF00392 Bacterial regulatory proteins, gntR family AM393_RS25200 PF00155 Aminotransferase class I and II AM393_RS25205 PF01654 Cytochrome bd terminal oxidase subunit I AM393_RS25210 PF02322 Cytochrome bd terminal oxidase subunit II AM393_RS25230 PF12392 Collagenase AM393_RS25230 PF01136 Peptidase family U32 AM393_RS25240 PF01381 Helix-turn-helix AM393_RS25240 PF07883 Cupin domain AM393_RS25245 PF03594 Benzoate membrane transport protein AM393_RS25250 PF12833 Helix-turn-helix domain AM393_RS25250 PF06445 GyrI-like small molecule binding domain AM393_RS25260 PF11769 Protein of unknown function (DUF3313) AM393_RS25265 PF03848 Tellurite resistance protein TehB AM393_RS25270 PF03595 Voltage-dependent anion channel AM393_RS25275 PF18836 Beta solenoid repeat from YDCK AM393_RS25280 PF13302 Acetyltransferase (GNAT) domain AM393_RS25285 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM393_RS25290 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS25290 PF00107 Zinc-binding dehydrogenase AM393_RS25295 PF00135 Carboxylesterase family AM393_RS25300 PF07063 Domain of unknown function (DUF1338) AM393_RS25305 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM393_RS25305 PF00775 Dioxygenase AM393_RS25310 PF00775 Dioxygenase AM393_RS25315 PF03466 LysR substrate binding domain AM393_RS25315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25320 PF01011 PQQ enzyme repeat AM393_RS25325 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS25325 PF00107 Zinc-binding dehydrogenase AM393_RS25330 PF02583 Metal-sensitive transcriptional repressor AM393_RS25335 PF01292 Prokaryotic cytochrome b561 AM393_RS25350 PF01638 HxlR-like helix-turn-helix AM393_RS25355 PF07690 Major Facilitator Superfamily AM393_RS25360 PF00962 Adenosine/AMP deaminase AM393_RS25365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS25365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM393_RS25375 PF00232 Glycosyl hydrolase family 1 AM393_RS25380 PF05321 Haemolysin expression modulating protein AM393_RS25385 PF10754 Protein of unknown function (DUF2569) AM393_RS25390 PF02508 Rnf-Nqr subunit, membrane protein AM393_RS25395 PF04060 Putative Fe-S cluster AM393_RS25400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM393_RS25400 PF12838 4Fe-4S dicluster domain AM393_RS25400 PF13375 RnfC Barrel sandwich hybrid domain AM393_RS25400 PF10531 SLBB domain AM393_RS25405 PF03116 NQR2, RnfD, RnfE family AM393_RS25410 PF04205 FMN-binding domain AM393_RS25415 PF02508 Rnf-Nqr subunit, membrane protein AM393_RS25420 PF10576 Iron-sulfur binding domain of endonuclease III AM393_RS25420 PF00633 Helix-hairpin-helix motif AM393_RS25420 PF00730 HhH-GPD superfamily base excision DNA repair protein AM393_RS25430 PF00854 POT family AM393_RS25435 PF00043 Glutathione S-transferase, C-terminal domain AM393_RS25435 PF02798 Glutathione S-transferase, N-terminal domain AM393_RS25440 PF08543 Phosphomethylpyrimidine kinase AM393_RS25445 PF00579 tRNA synthetases class I (W and Y) AM393_RS25450 PF01243 Pyridoxamine 5'-phosphate oxidase AM393_RS25450 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM393_RS25455 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM393_RS25460 PF03702 Anhydro-N-acetylmuramic acid kinase AM393_RS25465 PF05433 Glycine zipper 2TM domain AM393_RS25470 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS25470 PF17158 Membrane-associated sensor, integral membrane domain AM393_RS25475 PF01047 MarR family AM393_RS25480 PF07869 Protein of unknown function (DUF1656) AM393_RS25485 PF00529 HlyD membrane-fusion protein of T1SS AM393_RS25485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS25490 PF04632 Fusaric acid resistance protein family AM393_RS25495 PF00080 Copper/zinc superoxide dismutase (SODC) AM393_RS25500 PF00248 Aldo/keto reductase family AM393_RS25505 PF06945 Protein of unknown function (DUF1289) AM393_RS25510 PF00440 Bacterial regulatory proteins, tetR family AM393_RS25510 PF16925 Tetracyclin repressor-like, C-terminal domain AM393_RS25515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM393_RS25520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM393_RS25525 PF00929 Exonuclease AM393_RS25530 PF00462 Glutaredoxin AM393_RS25535 PF00877 NlpC/P60 family AM393_RS25545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM393_RS25545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM393_RS25550 PF07690 Major Facilitator Superfamily AM393_RS25555 PF00356 Bacterial regulatory proteins, lacI family AM393_RS25560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25560 PF03466 LysR substrate binding domain AM393_RS25565 PF07690 Major Facilitator Superfamily AM393_RS25575 PF00677 Lumazine binding domain AM393_RS25580 PF01554 MatE AM393_RS25590 PF03641 Possible lysine decarboxylase AM393_RS25620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25620 PF03466 LysR substrate binding domain AM393_RS25630 PF00753 Metallo-beta-lactamase superfamily AM393_RS25630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AM393_RS25630 PF10996 Beta-Casp domain AM393_RS25650 PF00484 Carbonic anhydrase AM393_RS25660 PF08220 DeoR-like helix-turn-helix domain AM393_RS25660 PF00455 DeoR C terminal sensor domain AM393_RS25665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM393_RS25675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS25680 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS25685 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS25690 PF00005 ABC transporter AM393_RS25690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS25695 PF00005 ABC transporter AM393_RS25695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS25715 PF07690 Major Facilitator Superfamily AM393_RS25720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25720 PF03466 LysR substrate binding domain AM393_RS25725 PF08240 Alcohol dehydrogenase GroES-like domain AM393_RS25725 PF16197 Ketoacyl-synthetase C-terminal extension AM393_RS25725 PF00109 Beta-ketoacyl synthase, N-terminal domain AM393_RS25725 PF02801 Beta-ketoacyl synthase, C-terminal domain AM393_RS25725 PF08659 KR domain AM393_RS25725 PF00550 Phosphopantetheine attachment site AM393_RS25725 PF14765 Polyketide synthase dehydratase AM393_RS25725 PF00698 Acyl transferase domain AM393_RS25730 PF03466 LysR substrate binding domain AM393_RS25730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25755 PF03466 LysR substrate binding domain AM393_RS25755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25765 PF00111 2Fe-2S iron-sulfur cluster binding domain AM393_RS25770 PF07969 Amidohydrolase family AM393_RS25775 PF01042 Endoribonuclease L-PSP AM393_RS25780 PF02633 Creatinine amidohydrolase AM393_RS25790 PF00005 ABC transporter AM393_RS25795 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS25800 PF01565 FAD binding domain AM393_RS25800 PF02913 FAD linked oxidases, C-terminal domain AM393_RS25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25825 PF03466 LysR substrate binding domain AM393_RS25830 PF01144 Coenzyme A transferase AM393_RS25835 PF01144 Coenzyme A transferase AM393_RS25845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM393_RS25845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM393_RS25855 PF00106 short chain dehydrogenase AM393_RS25860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS25860 PF03466 LysR substrate binding domain AM393_RS25865 PF03306 Alpha-acetolactate decarboxylase AM393_RS25870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM393_RS25870 PF00205 Thiamine pyrophosphate enzyme, central domain AM393_RS25870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM393_RS25875 PF00106 short chain dehydrogenase AM393_RS25890 PF00873 AcrB/AcrD/AcrF family AM393_RS25910 PF00072 Response regulator receiver domain AM393_RS25910 PF00486 Transcriptional regulatory protein, C terminal AM393_RS25915 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS25915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS25915 PF00672 HAMP domain AM393_RS25930 PF03544 Gram-negative bacterial TonB protein C-terminal AM393_RS25965 PF03918 Cytochrome C biogenesis protein AM393_RS25970 PF08534 Redoxin AM393_RS25975 PF01578 Cytochrome C assembly protein AM393_RS25975 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM393_RS25980 PF03100 CcmE AM393_RS25990 PF01578 Cytochrome C assembly protein AM393_RS25995 PF03379 CcmB protein AM393_RS26000 PF00005 ABC transporter AM393_RS26005 PF00034 Cytochrome c AM393_RS26005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM393_RS26010 PF00732 GMC oxidoreductase AM393_RS26010 PF05199 GMC oxidoreductase AM393_RS26015 PF13618 Gluconate 2-dehydrogenase subunit 3 AM393_RS26025 PF08402 TOBE domain AM393_RS26025 PF00005 ABC transporter AM393_RS26030 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS26045 PF02615 Malate/L-lactate dehydrogenase AM393_RS26050 PF00384 Molybdopterin oxidoreductase AM393_RS26050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM393_RS26050 PF01568 Molydopterin dinucleotide binding domain AM393_RS26055 PF07687 Peptidase dimerisation domain AM393_RS26055 PF01546 Peptidase family M20/M25/M40 AM393_RS26070 PF07690 Major Facilitator Superfamily AM393_RS26085 PF00005 ABC transporter AM393_RS26090 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS26095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM393_RS26110 PF01032 FecCD transport family AM393_RS26115 PF01032 FecCD transport family AM393_RS26120 PF00005 ABC transporter AM393_RS26125 PF07715 TonB-dependent Receptor Plug Domain AM393_RS26130 PF00005 ABC transporter AM393_RS26135 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS26155 PF00296 Luciferase-like monooxygenase AM393_RS26160 PF03466 LysR substrate binding domain AM393_RS26160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS26165 PF05995 Cysteine dioxygenase type I AM393_RS26175 PF02578 Multi-copper polyphenol oxidoreductase laccase AM393_RS26180 PF07690 Major Facilitator Superfamily AM393_RS26185 PF00682 HMGL-like AM393_RS26185 PF07836 DmpG-like communication domain AM393_RS26190 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AM393_RS26190 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM393_RS26195 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM393_RS26200 PF12697 Alpha/beta hydrolase family AM393_RS26205 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM393_RS26210 PF01494 FAD binding domain AM393_RS26215 PF09339 IclR helix-turn-helix domain AM393_RS26215 PF01614 Bacterial transcriptional regulator AM393_RS26220 PF01497 Periplasmic binding protein AM393_RS26225 PF01032 FecCD transport family AM393_RS26230 PF00005 ABC transporter AM393_RS26240 PF01488 Shikimate / quinate 5-dehydrogenase AM393_RS26240 PF08501 Shikimate dehydrogenase substrate binding domain AM393_RS26240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM393_RS26245 PF07690 Major Facilitator Superfamily AM393_RS26250 PF01261 Xylose isomerase-like TIM barrel AM393_RS26250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM393_RS26255 PF00440 Bacterial regulatory proteins, tetR family AM393_RS26255 PF17926 Tetracyclin repressor-like, C-terminal domain AM393_RS26260 PF10965 Protein of unknown function (DUF2767) AM393_RS26270 PF02887 Pyruvate kinase, alpha/beta domain AM393_RS26270 PF00224 Pyruvate kinase, barrel domain AM393_RS26275 PF04728 Lipoprotein leucine-zipper AM393_RS26280 PF17969 L,D-transpeptidase C-terminal domain AM393_RS26280 PF01476 LysM domain AM393_RS26280 PF03734 L,D-transpeptidase catalytic domain AM393_RS26285 PF02657 Fe-S metabolism associated domain AM393_RS26290 PF00266 Aminotransferase class-V AM393_RS26295 PF01458 Uncharacterized protein family (UPF0051) AM393_RS26300 PF00005 ABC transporter AM393_RS26305 PF01458 Uncharacterized protein family (UPF0051) AM393_RS26310 PF01521 Iron-sulphur cluster biosynthesis AM393_RS26325 PF00440 Bacterial regulatory proteins, tetR family AM393_RS26330 PF01070 FMN-dependent dehydrogenase AM393_RS26335 PF00873 AcrB/AcrD/AcrF family AM393_RS26345 PF00440 Bacterial regulatory proteins, tetR family AM393_RS26355 PF03466 LysR substrate binding domain AM393_RS26355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS26365 PF01032 FecCD transport family AM393_RS26370 PF00005 ABC transporter AM393_RS26375 PF07690 Major Facilitator Superfamily AM393_RS26380 PF08267 Cobalamin-independent synthase, N-terminal domain AM393_RS26380 PF01717 Cobalamin-independent synthase, Catalytic domain AM393_RS26400 PF04226 Transglycosylase associated protein AM393_RS26405 PF03061 Thioesterase superfamily AM393_RS26410 PF02913 FAD linked oxidases, C-terminal domain AM393_RS26410 PF01565 FAD binding domain AM393_RS26410 PF13183 4Fe-4S dicluster domain AM393_RS26415 PF01594 AI-2E family transporter AM393_RS26425 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM393_RS26425 PF00391 PEP-utilising enzyme, mobile domain AM393_RS26425 PF02896 PEP-utilising enzyme, TIM barrel domain AM393_RS26435 PF03618 Kinase/pyrophosphorylase AM393_RS26440 PF00793 DAHP synthetase I family AM393_RS26445 PF10636 Hemin uptake protein hemP AM393_RS26450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM393_RS26455 PF00877 NlpC/P60 family AM393_RS26460 PF00005 ABC transporter AM393_RS26465 PF00255 Glutathione peroxidase AM393_RS26470 PF03180 NLPA lipoprotein AM393_RS26475 PF01032 FecCD transport family AM393_RS26485 PF03466 LysR substrate binding domain AM393_RS26485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM393_RS26490 PF01266 FAD dependent oxidoreductase AM393_RS26500 PF00216 Bacterial DNA-binding protein AM393_RS26505 PF03147 Ferredoxin-fold anticodon binding domain AM393_RS26505 PF03484 tRNA synthetase B5 domain AM393_RS26505 PF03483 B3/4 domain AM393_RS26505 PF01588 Putative tRNA binding domain AM393_RS26505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM393_RS26510 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM393_RS26510 PF01409 tRNA synthetases class II core domain (F) AM393_RS26520 PF00453 Ribosomal protein L20 AM393_RS26525 PF01632 Ribosomal protein L35 AM393_RS26530 PF05198 Translation initiation factor IF-3, N-terminal domain AM393_RS26530 PF00707 Translation initiation factor IF-3, C-terminal domain AM393_RS26535 PF03129 Anticodon binding domain AM393_RS26535 PF02824 TGS domain AM393_RS26535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM393_RS26535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM393_RS26545 PF04338 Protein of unknown function, DUF481 AM393_RS26550 PF00294 pfkB family carbohydrate kinase AM393_RS26555 PF11080 Endoribonuclease GhoS AM393_RS26560 PF03881 Fructosamine kinase AM393_RS26565 PF03544 Gram-negative bacterial TonB protein C-terminal AM393_RS26570 PF03795 YCII-related domain AM393_RS26575 PF04264 YceI-like domain AM393_RS26585 PF13091 PLD-like domain AM393_RS26585 PF13396 Phospholipase_D-nuclease N-terminal AM393_RS26590 PF04269 Protein of unknown function, DUF440 AM393_RS26595 PF00520 Ion transport protein AM393_RS26595 PF00027 Cyclic nucleotide-binding domain AM393_RS26600 PF00005 ABC transporter AM393_RS26600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS26605 PF00005 ABC transporter AM393_RS26605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM393_RS26610 PF12911 N-terminal TM domain of oligopeptide transport permease C AM393_RS26610 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS26615 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS26620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM393_RS26625 PF01914 MarC family integral membrane protein AM393_RS26635 PF00465 Iron-containing alcohol dehydrogenase AM393_RS26635 PF00171 Aldehyde dehydrogenase family AM393_RS26640 PF00265 Thymidine kinase AM393_RS26645 PF00816 H-NS histone family AM393_RS26650 PF00483 Nucleotidyl transferase AM393_RS26655 PF00072 Response regulator receiver domain AM393_RS26660 PF01734 Patatin-like phospholipase AM393_RS26665 PF02810 SEC-C motif AM393_RS26670 PF00551 Formyl transferase AM393_RS26670 PF01842 ACT domain AM393_RS26705 PF01037 Lrp/AsnC ligand binding domain AM393_RS26715 PF02665 Nitrate reductase gamma subunit AM393_RS26720 PF02613 Nitrate reductase delta subunit AM393_RS26725 PF13247 4Fe-4S dicluster domain AM393_RS26725 PF14711 Respiratory nitrate reductase beta C-terminal AM393_RS26730 PF00384 Molybdopterin oxidoreductase AM393_RS26730 PF01568 Molydopterin dinucleotide binding domain AM393_RS26730 PF14710 Respiratory nitrate reductase alpha N-terminal AM393_RS26735 PF07690 Major Facilitator Superfamily AM393_RS26740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS26740 PF00672 HAMP domain AM393_RS26740 PF07730 Histidine kinase AM393_RS26740 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM393_RS26745 PF00072 Response regulator receiver domain AM393_RS26745 PF00196 Bacterial regulatory proteins, luxR family AM393_RS26750 PF11924 Inverse autotransporter, beta-domain AM393_RS26755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM393_RS26755 PF01568 Molydopterin dinucleotide binding domain AM393_RS26755 PF00384 Molybdopterin oxidoreductase AM393_RS26755 PF04324 BFD-like [2Fe-2S] binding domain AM393_RS26760 PF13806 Rieske-like [2Fe-2S] domain AM393_RS26760 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM393_RS26760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM393_RS26760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM393_RS26760 PF04324 BFD-like [2Fe-2S] binding domain AM393_RS26760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS26765 PF00005 ABC transporter AM393_RS26770 PF00528 Binding-protein-dependent transport system inner membrane component AM393_RS26780 PF08376 Nitrate and nitrite sensing AM393_RS26780 PF03861 ANTAR domain AM393_RS26785 PF02635 DsrE/DsrF-like family AM393_RS26795 PF04752 ChaC-like protein AM393_RS26800 PF06150 ChaB AM393_RS26805 PF01699 Sodium/calcium exchanger protein AM393_RS26810 PF00793 DAHP synthetase I family AM393_RS26815 PF13369 Transglutaminase-like superfamily AM393_RS26820 PF04247 Invasion gene expression up-regulator, SirB AM393_RS26825 PF13847 Methyltransferase domain AM393_RS26825 PF17827 PrmC N-terminal domain AM393_RS26830 PF00472 RF-1 domain AM393_RS26830 PF03462 PCRF domain AM393_RS26835 PF01488 Shikimate / quinate 5-dehydrogenase AM393_RS26835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM393_RS26835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM393_RS26840 PF03550 Outer membrane lipoprotein LolB AM393_RS26845 PF08544 GHMP kinases C terminal AM393_RS26845 PF00288 GHMP kinases N terminal domain AM393_RS26855 PF14572 Phosphoribosyl synthetase-associated domain AM393_RS26855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM393_RS26860 PF01740 STAS domain AM393_RS26860 PF00916 Sulfate permease family AM393_RS26870 PF10762 Protein of unknown function (DUF2583) AM393_RS26875 PF01195 Peptidyl-tRNA hydrolase AM393_RS26880 PF01926 50S ribosome-binding GTPase AM393_RS26880 PF06071 Protein of unknown function (DUF933) AM393_RS26890 PF13407 Periplasmic binding protein domain AM393_RS26945 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM393_RS26950 PF09673 Type-F conjugative transfer system pilin assembly protein AM393_RS26955 PF06834 TraU protein AM393_RS26965 PF12477 Sex factor F TraW protein N terminal AM393_RS26970 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) AM393_RS26975 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer AM393_RS27015 PF09676 Type IV conjugative transfer system lipoprotein (TraV) AM393_RS27020 PF03743 Bacterial conjugation TrbI-like protein AM393_RS27025 PF06586 TraK protein AM393_RS27030 PF05309 TraE protein AM393_RS27035 PF07178 TraL protein AM393_RS27040 PF05513 TraA AM393_RS27045 PF05509 TraY domain AM393_RS27055 PF05261 TraM protein, DNA-binding AM393_RS27060 PF01464 Transglycosylase SLT domain AM393_RS27070 PF06067 Domain of unknown function (DUF932) AM393_RS27095 PF01381 Helix-turn-helix AM393_RS27150 PF01848 Hok/gef family AM393_RS27180 PF06290 Plasmid SOS inhibition protein (PsiB) AM393_RS27185 PF02195 ParB-like nuclease domain AM393_RS27190 PF06006 Bacterial protein of unknown function (DUF905) AM393_RS27195 PF00436 Single-strand binding protein family AM393_RS27250 PF03230 Antirestriction protein AM393_RS27265 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS27275 PF00717 Peptidase S24-like AM393_RS27280 PF13438 Domain of unknown function (DUF4113) AM393_RS27280 PF00817 impB/mucB/samB family AM393_RS27280 PF11799 impB/mucB/samB family C-terminal domain AM393_RS27305 PF02195 ParB-like nuclease domain AM393_RS27305 PF18090 Centromere-binding protein HTH domain AM393_RS27310 PF13614 AAA domain AM393_RS27315 PF01051 Initiator Replication protein AM393_RS27325 PF00589 Phage integrase family AM393_RS27330 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS27330 PF13185 GAF domain AM393_RS27335 PF00498 FHA domain AM393_RS27335 PF00990 Diguanylate cyclase, GGDEF domain AM393_RS27335 PF00563 EAL domain AM393_RS27340 PF13737 Transposase DDE domain AM393_RS27350 PF12792 CSS motif domain associated with EAL AM393_RS27350 PF00563 EAL domain AM393_RS27355 PF10011 Predicted membrane protein (DUF2254) AM393_RS27360 PF02028 BCCT, betaine/carnitine/choline family transporter AM393_RS27395 PF00672 HAMP domain AM393_RS27395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS27395 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS27400 PF00486 Transcriptional regulatory protein, C terminal AM393_RS27400 PF00072 Response regulator receiver domain AM393_RS27405 PF02321 Outer membrane efflux protein AM393_RS27410 PF11604 Copper binding periplasmic protein CusF AM393_RS27415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM393_RS27420 PF00873 AcrB/AcrD/AcrF family AM393_RS27430 PF04945 YHS domain AM393_RS27440 PF01551 Peptidase family M23 AM393_RS27440 PF08525 Opacity-associated protein A N-terminal motif AM393_RS27440 PF01476 LysM domain AM393_RS27450 PF07731 Multicopper oxidase AM393_RS27450 PF00394 Multicopper oxidase AM393_RS27450 PF07732 Multicopper oxidase AM393_RS27455 PF05275 Copper resistance protein B precursor (CopB) AM393_RS27460 PF04234 CopC domain AM393_RS27465 PF05425 Copper resistance protein D AM393_RS27470 PF00486 Transcriptional regulatory protein, C terminal AM393_RS27470 PF00072 Response regulator receiver domain AM393_RS27475 PF00512 His Kinase A (phospho-acceptor) domain AM393_RS27475 PF00672 HAMP domain AM393_RS27475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM393_RS27495 PF00230 Major intrinsic protein AM393_RS27510 PF03358 NADPH-dependent FMN reductase AM393_RS27535 PF03960 ArsC family AM393_RS27540 PF02040 Arsenical pump membrane protein AM393_RS27545 PF02374 Anion-transporting ATPase AM393_RS27550 PF06953 Arsenical resistance operon trans-acting repressor ArsD AM393_RS27555 PF01022 Bacterial regulatory protein, arsR family AM393_RS27590 PF05717 IS66 Orf2 like protein AM393_RS27595 PF03050 Transposase IS66 family AM393_RS27595 PF13817 IS66 C-terminal element AM393_RS27595 PF13007 Transposase C of IS166 homeodomain AM393_RS27595 PF13005 zinc-finger binding domain of transposase IS66 AM393_RS27620 PF10411 Disulfide bond isomerase protein N-terminus AM393_RS27620 PF13098 Thioredoxin-like domain AM393_RS27695 PF02371 Transposase IS116/IS110/IS902 family AM393_RS27695 PF01548 Transposase AM393_RS27755 PF02387 IncFII RepA protein family AM393_RS27765 PF10723 Replication regulatory protein RepB AM393_RS27780 PF13700 Domain of unknown function (DUF4158) AM393_RS27780 PF01526 Tn3 transposase DDE domain AM393_RS27790 PF00892 EamA-like transporter family AM393_RS27795 PF07690 Major Facilitator Superfamily AM393_RS27800 PF02909 Tetracyclin repressor-like, C-terminal domain AM393_RS27800 PF00440 Bacterial regulatory proteins, tetR family AM393_RS27810 PF13610 DDE domain AM393_RS27820 PF01636 Phosphotransferase enzyme family AM393_RS27840 PF13610 DDE domain AM393_RS27845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM393_RS27845 PF00672 HAMP domain AM393_RS27845 PF12729 Four helix bundle sensory module for signal transduction AM393_RS27850 PF03050 Transposase IS66 family AM393_RS27850 PF13005 zinc-finger binding domain of transposase IS66 AM393_RS27850 PF13007 Transposase C of IS166 homeodomain AM393_RS27850 PF13817 IS66 C-terminal element AM393_RS27855 PF05717 IS66 Orf2 like protein AM393_RS27870 PF00665 Integrase core domain AM393_RS27870 PF13333 Integrase core domain AM393_RS27870 PF13276 HTH-like domain AM393_RS27875 PF13195 Protein of unknown function (DUF4011) AM393_RS27875 PF13087 AAA domain AM393_RS27875 PF13086 AAA domain AM393_RS27875 PF13086 AAA domain AM393_RS27875 PF13195 Protein of unknown function (DUF4011) AM393_RS27875 PF13087 AAA domain AM393_RS27900 PF12759 InsA C-terminal domain AM393_RS27900 PF03811 InsA N-terminal domain AM393_RS27915 PF11867 Domain of unknown function (DUF3387) AM393_RS27915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM393_RS27915 PF18766 SWI2/SNF2 ATPase AM393_RS27920 PF03695 Uncharacterised protein family (UPF0149) AM393_RS27920 PF02810 SEC-C motif AM393_RS27925 PF01420 Type I restriction modification DNA specificity domain AM393_RS27930 PF12161 HsdM N-terminal domain AM393_RS27930 PF02384 N-6 DNA Methylase AM393_RS27940 PF05598 Transposase domain (DUF772) AM393_RS27940 PF01609 Transposase DDE domain AM393_RS27950 PF04352 ProQ/FINO family AM393_RS27950 PF12602 Fertility inhibition protein N terminal AM393_RS27955 PF05857 TraX protein AM393_RS27960 PF08751 TrwC relaxase AM393_RS27960 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM393_RS27960 PF18340 DNA relaxase TraI 2B/2B-like domain AM393_RS27960 PF07057 DNA helicase TraI AM393_RS27965 PF10412 Type IV secretion-system coupling protein DNA-binding domain AM393_RS27965 PF12615 F sex factor protein N terminal AM393_RS27975 PF05818 Enterobacterial TraT complement resistance protein AM393_RS27985 PF07916 TraG-like protein, N-terminal region AM393_RS27990 PF06122 Conjugative relaxosome accessory transposon protein AM393_RS28000 PF13728 F plasmid transfer operon protein AM393_RS28005 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) AM393_RS28010 PF13728 F plasmid transfer operon protein AM393_RS28025 PF11100 Conjugal transfer protein TrbE AM393_RS28040 PF00239 Resolvase, N terminal domain AM393_RS28040 PF02796 Helix-turn-helix domain of resolvase AM393_RS28045 PF01526 Tn3 transposase DDE domain AM393_RS28045 PF13700 Domain of unknown function (DUF4158) AM393_RS28050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM393_RS28055 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM393_RS28065 PF00753 Metallo-beta-lactamase superfamily AM393_RS28070 PF13936 Helix-turn-helix domain AM393_RS28070 PF00665 Integrase core domain AM393_RS28080 PF12161 HsdM N-terminal domain AM393_RS28080 PF02384 N-6 DNA Methylase AM393_RS28140 PF01464 Transglycosylase SLT domain AM393_RS28155 PF00437 Type II/IV secretion system protein AM393_RS28255 PF13817 IS66 C-terminal element AM393_RS28255 PF03050 Transposase IS66 family AM393_RS28255 PF13005 zinc-finger binding domain of transposase IS66 AM393_RS28255 PF13007 Transposase C of IS166 homeodomain AM393_RS28270 PF13091 PLD-like domain AM393_RS28280 PF03432 Relaxase/Mobilisation nuclease domain AM393_RS28280 PF18821 Large polyvalent protein-associated domain 7 AM393_RS28305 PF03230 Antirestriction protein AM393_RS28325 PF04002 RadC-like JAB domain AM393_RS28345 PF06406 StbA protein AM393_RS28375 PF03811 InsA N-terminal domain AM393_RS28375 PF12759 InsA C-terminal domain AM393_RS28385 PF01845 CcdB protein AM393_RS28390 PF07362 Post-segregation antitoxin CcdA AM393_RS28395 PF02371 Transposase IS116/IS110/IS902 family AM393_RS28395 PF01548 Transposase AM393_RS28400 PF13737 Transposase DDE domain AM393_RS28405 PF00717 Peptidase S24-like AM393_RS28410 PF13438 Domain of unknown function (DUF4113) AM393_RS28410 PF00817 impB/mucB/samB family AM393_RS28410 PF11799 impB/mucB/samB family C-terminal domain AM393_RS28415 PF01051 Initiator Replication protein AM393_RS28420 PF13614 AAA domain AM393_RS28430 PF00589 Phage integrase family AM393_RS28455 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM393_RS28460 PF01850 PIN domain AM393_RS28465 PF02463 RecF/RecN/SMC N terminal domain AM393_RS28475 PF13427 Domain of unknown function (DUF4111) AM393_RS28475 PF01909 Nucleotidyltransferase domain AM393_RS28485 PF00239 Resolvase, N terminal domain AM393_RS28485 PF02796 Helix-turn-helix domain of resolvase AM393_RS28490 PF13700 Domain of unknown function (DUF4158) AM393_RS28490 PF01526 Tn3 transposase DDE domain AM393_RS28515 PF13098 Thioredoxin-like domain AM393_RS28515 PF10411 Disulfide bond isomerase protein N-terminus AM393_RS28525 PF13737 Transposase DDE domain AM393_RS28535 PF02586 SOS response associated peptidase (SRAP) AM393_RS28545 PF05598 Transposase domain (DUF772) AM393_RS28545 PF01609 Transposase DDE domain AM393_RS28560 PF02371 Transposase IS116/IS110/IS902 family AM393_RS28560 PF01548 Transposase AM393_RS28565 PF13700 Domain of unknown function (DUF4158) AM393_RS28565 PF01526 Tn3 transposase DDE domain AM393_RS28590 PF01695 IstB-like ATP binding protein AM393_RS28595 PF00665 Integrase core domain AM393_RS28595 PF02796 Helix-turn-helix domain of resolvase AM393_RS28625 PF01022 Bacterial regulatory protein, arsR family AM393_RS28630 PF06953 Arsenical resistance operon trans-acting repressor ArsD AM393_RS28635 PF02374 Anion-transporting ATPase AM393_RS28640 PF02040 Arsenical pump membrane protein AM393_RS28645 PF03960 ArsC family AM393_RS28650 PF02374 Anion-transporting ATPase AM393_RS28655 PF02796 Helix-turn-helix domain of resolvase AM393_RS28655 PF00239 Resolvase, N terminal domain AM393_RS28660 PF01526 Tn3 transposase DDE domain AM393_RS28660 PF13700 Domain of unknown function (DUF4158) AM393_RS28675 PF13599 Pentapeptide repeats (9 copies) AM393_RS28680 PF00158 Sigma-54 interaction domain AM393_RS28680 PF02954 Bacterial regulatory protein, Fis family AM393_RS28685 PF04012 PspA/IM30 family AM393_RS28690 PF06667 Phage shock protein B AM393_RS28695 PF04024 PspC domain AM393_RS28700 PF09584 Phage shock protein PspD (Phageshock_PspD) AM393_RS28705 PF00581 Rhodanese-like domain AM393_RS28710 PF04317 YcjX-like family, DUF463 AM393_RS28720 PF13610 DDE domain AM393_RS28755 PF01051 Initiator Replication protein AM393_RS28780 PF13610 DDE domain AM393_RS28795 PF03400 IS1 transposase AM393_RS28800 PF18284 DNA methylase N-terminal domain AM393_RS28800 PF00145 C-5 cytosine-specific DNA methylase AM393_RS28805 PF09217 Restriction endonuclease EcoRII, N-terminal AM393_RS28805 PF09019 EcoRII C terminal AM393_RS28820 PF13610 DDE domain AM393_RS28835 PF00186 Dihydrofolate reductase AM393_RS28840 PF00589 Phage integrase family AM393_RS28840 PF13495 Phage integrase, N-terminal SAM-like domain AM393_RS28850 PF00239 Resolvase, N terminal domain AM393_RS28850 PF02796 Helix-turn-helix domain of resolvase AM393_RS28880 PF13610 DDE domain AM393_RS28890 PF00302 Chloramphenicol acetyltransferase AM393_RS28900 PF13610 DDE domain AM393_RS28910 PF00905 Penicillin binding protein transpeptidase domain AM393_RS28915 PF00132 Bacterial transferase hexapeptide (six repeats) AM393_RS28920 PF13610 DDE domain AM393_RS28925 PF01526 Tn3 transposase DDE domain AM393_RS28925 PF13700 Domain of unknown function (DUF4158) AM393_RS28945 PF01051 Initiator Replication protein AM393_RS28955 PF13614 AAA domain AM393_RS28955 PF18607 ParA helix turn helix domain AM393_RS28960 PF08775 ParB family AM393_RS28960 PF02195 ParB-like nuclease domain AM393_RS28965 PF00817 impB/mucB/samB family AM393_RS28965 PF11799 impB/mucB/samB family C-terminal domain AM393_RS28965 PF13438 Domain of unknown function (DUF4113) AM393_RS28970 PF00717 Peptidase S24-like AM393_RS28980 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM393_RS28985 PF18818 Metallopeptidase superfamily domain AM393_RS28985 PF08401 Domain of unknown function (DUF1738) AM393_RS28985 PF13362 Toprim domain AM393_RS28995 PF13091 PLD-like domain AM393_RS29005 PF00376 MerR family regulatory protein AM393_RS29005 PF09278 MerR, DNA binding AM393_RS29010 PF02411 MerT mercuric transport protein AM393_RS29015 PF00403 Heavy-metal-associated domain AM393_RS29020 PF03203 MerC mercury resistance protein AM393_RS29025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM393_RS29025 PF00403 Heavy-metal-associated domain AM393_RS29025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM393_RS29030 PF13411 MerR HTH family regulatory protein AM393_RS29035 PF05052 MerE protein AM393_RS29045 PF11809 Domain of unknown function (DUF3330) AM393_RS29045 PF00563 EAL domain AM393_RS29050 PF02796 Helix-turn-helix domain of resolvase AM393_RS29050 PF00239 Resolvase, N terminal domain AM393_RS29055 PF01526 Tn3 transposase DDE domain AM393_RS29055 PF13700 Domain of unknown function (DUF4158) AM393_RS29060 PF01548 Transposase AM393_RS29060 PF02371 Transposase IS116/IS110/IS902 family AM393_RS29075 PF00809 Pterin binding enzyme AM393_RS29080 PF01636 Phosphotransferase enzyme family AM393_RS29085 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM393_RS29095 PF01051 Initiator Replication protein AM393_RS29105 PF00589 Phage integrase family AM393_RS29145 PF13817 IS66 C-terminal element AM393_RS29145 PF03050 Transposase IS66 family AM393_RS29145 PF13005 zinc-finger binding domain of transposase IS66 AM393_RS29145 PF13007 Transposase C of IS166 homeodomain AM393_RS29150 PF05717 IS66 Orf2 like protein